cmd.read_pdbstr("""\ ATOM 1 N MET Q 1 -47.980 -4.380 78.302 1.00 -1.00 \ ATOM 2 CA MET Q 1 -47.114 -4.761 79.411 1.00 -1.00 \ ATOM 3 C MET Q 1 -47.601 -4.134 80.708 1.00 -1.00 \ ATOM 4 O MET Q 1 -48.141 -3.024 80.699 1.00 -1.00 \ ATOM 5 CB MET Q 1 -45.680 -4.337 79.133 1.00 -1.00 \ ATOM 6 CG MET Q 1 -45.479 -2.839 79.154 1.00 -1.00 \ ATOM 7 SD MET Q 1 -43.745 -2.365 79.259 1.00 -1.00 \ ATOM 8 CE MET Q 1 -43.118 -3.567 80.427 1.00 -1.00 \ ATOM 9 N ARG Q 2 -47.410 -4.856 81.813 1.00 0.39 \ ATOM 10 CA ARG Q 2 -47.911 -4.423 83.116 1.00 0.39 \ ATOM 11 C ARG Q 2 -47.504 -2.981 83.386 1.00 0.39 \ ATOM 12 O ARG Q 2 -46.389 -2.569 83.065 1.00 0.39 \ ATOM 13 CB ARG Q 2 -47.385 -5.372 84.207 1.00 0.39 \ ATOM 14 CG ARG Q 2 -47.399 -4.852 85.648 1.00 0.39 \ ATOM 15 CD ARG Q 2 -48.100 -5.820 86.616 1.00 0.39 \ ATOM 16 NE ARG Q 2 -47.222 -6.762 87.316 1.00 0.39 \ ATOM 17 CZ ARG Q 2 -47.166 -6.894 88.643 1.00 0.39 \ ATOM 18 NH1 ARG Q 2 -47.934 -6.137 89.422 1.00 0.39 \ ATOM 19 NH2 ARG Q 2 -46.346 -7.785 89.196 1.00 0.39 \ ATOM 20 N ALA Q 3 -48.436 -2.197 83.933 1.00 0.39 \ ATOM 21 CA ALA Q 3 -48.183 -0.771 84.133 1.00 0.39 \ ATOM 22 C ALA Q 3 -46.953 -0.527 85.003 1.00 0.39 \ ATOM 23 O ALA Q 3 -46.173 0.395 84.744 1.00 0.39 \ ATOM 24 CB ALA Q 3 -49.412 -0.108 84.755 1.00 0.39 \ ATOM 25 N LYS Q 4 -46.770 -1.337 86.044 1.00 0.39 \ ATOM 26 CA LYS Q 4 -45.620 -1.172 86.919 1.00 0.39 \ ATOM 27 C LYS Q 4 -44.316 -1.433 86.177 1.00 0.39 \ ATOM 28 O LYS Q 4 -43.344 -0.689 86.339 1.00 0.39 \ ATOM 29 CB LYS Q 4 -45.765 -2.100 88.116 1.00 0.39 \ ATOM 30 CG LYS Q 4 -44.491 -2.718 88.564 1.00 0.39 \ ATOM 31 CD LYS Q 4 -44.424 -2.752 90.062 1.00 0.39 \ ATOM 32 CE LYS Q 4 -45.471 -3.657 90.620 1.00 0.39 \ ATOM 33 NZ LYS Q 4 -45.194 -3.921 92.064 1.00 0.39 \ ATOM 34 N TRP Q 5 -44.278 -2.485 85.353 1.00 0.39 \ ATOM 35 CA TRP Q 5 -43.094 -2.745 84.536 1.00 0.39 \ ATOM 36 C TRP Q 5 -42.878 -1.651 83.495 1.00 0.39 \ ATOM 37 O TRP Q 5 -41.737 -1.306 83.179 1.00 0.39 \ ATOM 38 CB TRP Q 5 -43.201 -4.096 83.833 1.00 0.39 \ ATOM 39 CG TRP Q 5 -43.410 -5.301 84.676 1.00 0.39 \ ATOM 40 CD1 TRP Q 5 -44.038 -6.450 84.287 1.00 0.39 \ ATOM 41 CD2 TRP Q 5 -42.979 -5.518 86.024 1.00 0.39 \ ATOM 42 NE1 TRP Q 5 -44.034 -7.366 85.310 1.00 0.39 \ ATOM 43 CE2 TRP Q 5 -43.387 -6.817 86.387 1.00 0.39 \ ATOM 44 CE3 TRP Q 5 -42.293 -4.749 86.958 1.00 0.39 \ ATOM 45 CZ2 TRP Q 5 -43.136 -7.351 87.645 1.00 0.39 \ ATOM 46 CZ3 TRP Q 5 -42.048 -5.283 88.201 1.00 0.39 \ ATOM 47 CH2 TRP Q 5 -42.472 -6.568 88.536 1.00 0.39 \ ATOM 48 N ARG Q 6 -43.958 -1.128 82.918 1.00 0.39 \ ATOM 49 CA ARG Q 6 -43.839 0.008 82.019 1.00 0.39 \ ATOM 50 C ARG Q 6 -43.430 1.266 82.769 1.00 0.39 \ ATOM 51 O ARG Q 6 -42.864 2.184 82.169 1.00 0.39 \ ATOM 52 CB ARG Q 6 -45.159 0.209 81.272 1.00 0.39 \ ATOM 53 CG ARG Q 6 -45.376 1.590 80.667 1.00 0.39 \ ATOM 54 CD ARG Q 6 -45.074 1.629 79.183 1.00 0.39 \ ATOM 55 NE ARG Q 6 -45.669 2.804 78.533 1.00 0.39 \ ATOM 56 CZ ARG Q 6 -45.010 3.926 78.217 1.00 0.39 \ ATOM 57 NH1 ARG Q 6 -43.708 4.053 78.479 1.00 0.39 \ ATOM 58 NH2 ARG Q 6 -45.651 4.932 77.623 1.00 0.39 \ ATOM 59 N LYS Q 7 -43.678 1.321 84.073 1.00 0.39 \ ATOM 60 CA LYS Q 7 -43.127 2.404 84.873 1.00 0.39 \ ATOM 61 C LYS Q 7 -41.619 2.243 85.025 1.00 0.39 \ ATOM 62 O LYS Q 7 -40.850 3.171 84.752 1.00 0.39 \ ATOM 63 CB LYS Q 7 -43.819 2.436 86.231 1.00 0.39 \ ATOM 64 CG LYS Q 7 -43.496 3.617 87.085 1.00 0.39 \ ATOM 65 CD LYS Q 7 -44.370 3.590 88.312 1.00 0.39 \ ATOM 66 CE LYS Q 7 -44.200 4.849 89.123 1.00 0.39 \ ATOM 67 NZ LYS Q 7 -45.077 4.879 90.326 1.00 0.39 \ ATOM 68 N LYS Q 8 -41.174 1.054 85.432 1.00 0.39 \ ATOM 69 CA LYS Q 8 -39.743 0.788 85.488 1.00 0.39 \ ATOM 70 C LYS Q 8 -39.082 0.984 84.131 1.00 0.39 \ ATOM 71 O LYS Q 8 -37.911 1.368 84.069 1.00 0.39 \ ATOM 72 CB LYS Q 8 -39.487 -0.626 85.999 1.00 0.39 \ ATOM 73 CG LYS Q 8 -38.049 -1.038 85.935 1.00 0.39 \ ATOM 74 CD LYS Q 8 -37.930 -2.536 85.929 1.00 0.39 \ ATOM 75 CE LYS Q 8 -38.228 -3.116 87.289 1.00 0.39 \ ATOM 76 NZ LYS Q 8 -37.002 -3.250 88.133 1.00 0.39 \ ATOM 77 N ARG Q 9 -39.810 0.728 83.039 1.00 0.39 \ ATOM 78 CA ARG Q 9 -39.264 0.927 81.698 1.00 0.39 \ ATOM 79 C ARG Q 9 -38.730 2.337 81.544 1.00 0.39 \ ATOM 80 O ARG Q 9 -37.529 2.548 81.327 1.00 0.39 \ ATOM 81 CB ARG Q 9 -40.335 0.667 80.642 1.00 0.39 \ ATOM 82 CG ARG Q 9 -40.077 -0.517 79.756 1.00 0.39 \ ATOM 83 CD ARG Q 9 -39.585 -0.081 78.394 1.00 0.39 \ ATOM 84 NE ARG Q 9 -40.380 -0.613 77.286 1.00 0.39 \ ATOM 85 CZ ARG Q 9 -40.417 -1.892 76.920 1.00 0.39 \ ATOM 86 NH1 ARG Q 9 -39.730 -2.811 77.579 1.00 0.39 \ ATOM 87 NH2 ARG Q 9 -41.164 -2.262 75.895 1.00 0.39 \ ATOM 88 N THR Q 10 -39.617 3.322 81.666 1.00 -2.46 \ ATOM 89 CA THR Q 10 -39.184 4.696 81.485 1.00 -2.46 \ ATOM 90 C THR Q 10 -38.374 5.190 82.673 1.00 -2.46 \ ATOM 91 O THR Q 10 -37.545 6.093 82.514 1.00 -2.46 \ ATOM 92 CB THR Q 10 -40.392 5.592 81.223 1.00 -2.46 \ ATOM 93 OG1 THR Q 10 -40.817 6.177 82.452 1.00 -2.46 \ ATOM 94 CG2 THR Q 10 -41.514 4.771 80.660 1.00 -2.46 \ ATOM 95 N ARG Q 11 -38.578 4.602 83.851 1.00 0.39 \ ATOM 96 CA ARG Q 11 -37.716 4.916 84.985 1.00 0.39 \ ATOM 97 C ARG Q 11 -36.251 4.696 84.623 1.00 0.39 \ ATOM 98 O ARG Q 11 -35.397 5.553 84.882 1.00 0.39 \ ATOM 99 CB ARG Q 11 -38.113 4.064 86.185 1.00 0.39 \ ATOM 100 CG ARG Q 11 -38.301 4.829 87.461 1.00 0.39 \ ATOM 101 CD ARG Q 11 -39.660 5.520 87.522 1.00 0.39 \ ATOM 102 NE ARG Q 11 -39.932 5.939 88.898 1.00 0.39 \ ATOM 103 CZ ARG Q 11 -40.561 5.193 89.805 1.00 0.39 \ ATOM 104 NH1 ARG Q 11 -41.021 3.994 89.482 1.00 0.39 \ ATOM 105 NH2 ARG Q 11 -40.744 5.647 91.035 1.00 0.39 \ ATOM 106 N ARG Q 12 -35.946 3.547 84.016 1.00 0.39 \ ATOM 107 CA ARG Q 12 -34.616 3.313 83.461 1.00 0.39 \ ATOM 108 C ARG Q 12 -34.310 4.311 82.356 1.00 0.39 \ ATOM 109 O ARG Q 12 -33.342 5.081 82.443 1.00 0.39 \ ATOM 110 CB ARG Q 12 -34.507 1.890 82.905 1.00 0.39 \ ATOM 111 CG ARG Q 12 -34.643 0.756 83.891 1.00 0.39 \ ATOM 112 CD ARG Q 12 -34.804 -0.550 83.137 1.00 0.39 \ ATOM 113 NE ARG Q 12 -34.935 -1.677 84.047 1.00 0.39 \ ATOM 114 CZ ARG Q 12 -35.269 -2.909 83.675 1.00 0.39 \ ATOM 115 NH1 ARG Q 12 -35.507 -3.190 82.400 1.00 0.39 \ ATOM 116 NH2 ARG Q 12 -35.366 -3.866 84.585 1.00 0.39 \ ATOM 117 N LEU Q 13 -35.121 4.282 81.292 1.00 0.39 \ ATOM 118 CA LEU Q 13 -34.881 5.099 80.113 1.00 0.39 \ ATOM 119 C LEU Q 13 -34.465 6.523 80.473 1.00 0.39 \ ATOM 120 O LEU Q 13 -33.527 7.079 79.893 1.00 0.39 \ ATOM 121 CB LEU Q 13 -36.148 5.070 79.263 1.00 0.39 \ ATOM 122 CG LEU Q 13 -36.332 5.759 77.905 1.00 0.39 \ ATOM 123 CD1 LEU Q 13 -36.718 7.169 78.140 1.00 0.39 \ ATOM 124 CD2 LEU Q 13 -35.110 5.677 76.996 1.00 0.39 \ ATOM 125 N LYS Q 14 -35.151 7.126 81.443 1.00 0.39 \ ATOM 126 CA LYS Q 14 -34.768 8.458 81.888 1.00 0.39 \ ATOM 127 C LYS Q 14 -33.374 8.444 82.499 1.00 0.39 \ ATOM 128 O LYS Q 14 -32.530 9.294 82.181 1.00 0.39 \ ATOM 129 CB LYS Q 14 -35.803 8.996 82.881 1.00 0.39 \ ATOM 130 CG LYS Q 14 -36.963 9.715 82.218 1.00 0.39 \ ATOM 131 CD LYS Q 14 -37.857 10.370 83.255 1.00 0.39 \ ATOM 132 CE LYS Q 14 -38.488 9.323 84.163 1.00 0.39 \ ATOM 133 NZ LYS Q 14 -39.532 9.883 85.080 1.00 0.39 \ ATOM 134 N ARG Q 15 -33.098 7.458 83.351 1.00 0.39 \ ATOM 135 CA ARG Q 15 -31.819 7.426 84.042 1.00 0.39 \ ATOM 136 C ARG Q 15 -30.657 7.258 83.071 1.00 0.39 \ ATOM 137 O ARG Q 15 -29.522 7.612 83.411 1.00 0.39 \ ATOM 138 CB ARG Q 15 -31.831 6.310 85.095 1.00 0.39 \ ATOM 139 CG ARG Q 15 -30.566 6.212 85.943 1.00 0.39 \ ATOM 140 CD ARG Q 15 -30.686 5.142 87.021 1.00 0.39 \ ATOM 141 NE ARG Q 15 -31.395 3.961 86.533 1.00 0.39 \ ATOM 142 CZ ARG Q 15 -31.681 2.886 87.273 1.00 0.39 \ ATOM 143 NH1 ARG Q 15 -31.313 2.822 88.558 1.00 0.39 \ ATOM 144 NH2 ARG Q 15 -32.341 1.867 86.727 1.00 0.39 \ ATOM 145 N LYS Q 16 -30.917 6.751 81.861 1.00 0.39 \ ATOM 146 CA LYS Q 16 -29.875 6.626 80.845 1.00 0.39 \ ATOM 147 C LYS Q 16 -29.732 7.889 80.001 1.00 0.39 \ ATOM 148 O LYS Q 16 -28.620 8.249 79.607 1.00 0.39 \ ATOM 149 CB LYS Q 16 -30.155 5.421 79.947 1.00 0.39 \ ATOM 150 CG LYS Q 16 -28.903 4.828 79.322 1.00 0.39 \ ATOM 151 CD LYS Q 16 -29.172 3.445 78.725 1.00 0.39 \ ATOM 152 CE LYS Q 16 -27.935 2.928 78.016 1.00 0.39 \ ATOM 153 NZ LYS Q 16 -27.353 3.981 77.114 1.00 0.39 \ ATOM 154 N ARG Q 17 -30.832 8.575 79.701 1.00 0.39 \ ATOM 155 CA ARG Q 17 -30.693 9.910 79.143 1.00 0.39 \ ATOM 156 C ARG Q 17 -30.033 10.830 80.142 1.00 0.39 \ ATOM 157 O ARG Q 17 -29.324 11.762 79.755 1.00 0.39 \ ATOM 158 CB ARG Q 17 -32.051 10.473 78.738 1.00 0.39 \ ATOM 159 CG ARG Q 17 -32.911 9.517 77.929 1.00 0.39 \ ATOM 160 CD ARG Q 17 -33.837 10.281 77.017 1.00 0.39 \ ATOM 161 NE ARG Q 17 -35.146 10.470 77.616 1.00 0.39 \ ATOM 162 CZ ARG Q 17 -36.282 10.057 77.064 1.00 0.39 \ ATOM 163 NH1 ARG Q 17 -36.282 9.419 75.894 1.00 0.39 \ ATOM 164 NH2 ARG Q 17 -37.428 10.275 77.694 1.00 0.39 \ ATOM 165 N ARG Q 18 -30.269 10.590 81.432 1.00 0.39 \ ATOM 166 CA ARG Q 18 -29.557 11.330 82.463 1.00 0.39 \ ATOM 167 C ARG Q 18 -28.057 11.178 82.271 1.00 0.39 \ ATOM 168 O ARG Q 18 -27.335 12.174 82.146 1.00 0.39 \ ATOM 169 CB ARG Q 18 -29.995 10.842 83.848 1.00 0.39 \ ATOM 170 CG ARG Q 18 -30.099 11.930 84.958 1.00 0.39 \ ATOM 171 CD ARG Q 18 -30.680 11.367 86.301 1.00 0.39 \ ATOM 172 NE ARG Q 18 -32.019 10.765 86.154 1.00 0.39 \ ATOM 173 CZ ARG Q 18 -32.595 9.961 87.055 1.00 0.39 \ ATOM 174 NH1 ARG Q 18 -31.956 9.660 88.185 1.00 0.39 \ ATOM 175 NH2 ARG Q 18 -33.806 9.448 86.830 1.00 0.39 \ ATOM 176 N LYS Q 19 -27.577 9.931 82.204 1.00 0.39 \ ATOM 177 CA LYS Q 19 -26.173 9.664 81.896 1.00 0.39 \ ATOM 178 C LYS Q 19 -25.743 10.393 80.627 1.00 0.39 \ ATOM 179 O LYS Q 19 -24.822 11.217 80.640 1.00 0.39 \ ATOM 180 CB LYS Q 19 -25.944 8.152 81.740 1.00 0.39 \ ATOM 181 CG LYS Q 19 -24.956 7.514 82.720 1.00 0.39 \ ATOM 182 CD LYS Q 19 -25.555 7.422 84.123 1.00 0.39 \ ATOM 183 CE LYS Q 19 -24.554 6.887 85.144 1.00 0.39 \ ATOM 184 NZ LYS Q 19 -24.141 5.481 84.857 1.00 0.39 \ ATOM 185 N VAL Q 20 -26.429 10.107 79.519 1.00 -2.46 \ ATOM 186 CA VAL Q 20 -25.996 10.592 78.216 1.00 -2.46 \ ATOM 187 C VAL Q 20 -25.892 12.105 78.206 1.00 -2.46 \ ATOM 188 O VAL Q 20 -24.946 12.672 77.650 1.00 -2.46 \ ATOM 189 CB VAL Q 20 -26.951 10.085 77.129 1.00 -2.46 \ ATOM 190 CG1 VAL Q 20 -26.746 10.854 75.856 1.00 -2.46 \ ATOM 191 CG2 VAL Q 20 -26.707 8.617 76.897 1.00 -2.46 \ ATOM 192 N ARG Q 21 -26.851 12.790 78.823 1.00 0.39 \ ATOM 193 CA ARG Q 21 -26.789 14.241 78.772 1.00 0.39 \ ATOM 194 C ARG Q 21 -25.610 14.769 79.568 1.00 0.39 \ ATOM 195 O ARG Q 21 -25.035 15.800 79.203 1.00 0.39 \ ATOM 196 CB ARG Q 21 -28.088 14.864 79.263 1.00 0.39 \ ATOM 197 CG ARG Q 21 -28.688 15.764 78.216 1.00 0.39 \ ATOM 198 CD ARG Q 21 -29.865 16.521 78.733 1.00 0.39 \ ATOM 199 NE ARG Q 21 -29.555 17.934 78.796 1.00 0.39 \ ATOM 200 CZ ARG Q 21 -30.379 18.867 79.250 1.00 0.39 \ ATOM 201 NH1 ARG Q 21 -29.979 20.129 79.267 1.00 0.39 \ ATOM 202 NH2 ARG Q 21 -31.590 18.548 79.687 1.00 0.39 \ ATOM 203 N ALA Q 22 -25.218 14.076 80.637 1.00 -2.46 \ ATOM 204 CA ALA Q 22 -24.088 14.556 81.417 1.00 -2.46 \ ATOM 205 C ALA Q 22 -22.774 14.460 80.649 1.00 -2.46 \ ATOM 206 O ALA Q 22 -21.822 15.164 80.996 1.00 -2.46 \ ATOM 207 CB ALA Q 22 -23.997 13.793 82.733 1.00 -2.46 \ ATOM 208 N ARG Q 23 -22.708 13.624 79.608 1.00 0.39 \ ATOM 209 CA ARG Q 23 -21.541 13.566 78.737 1.00 0.39 \ ATOM 210 C ARG Q 23 -21.205 14.896 78.089 1.00 0.39 \ ATOM 211 O ARG Q 23 -20.139 15.014 77.477 1.00 0.39 \ ATOM 212 CB ARG Q 23 -21.753 12.574 77.605 1.00 0.39 \ ATOM 213 CG ARG Q 23 -21.906 11.170 78.017 1.00 0.39 \ ATOM 214 CD ARG Q 23 -21.951 10.313 76.785 1.00 0.39 \ ATOM 215 NE ARG Q 23 -20.869 9.341 76.832 1.00 0.39 \ ATOM 216 CZ ARG Q 23 -19.787 9.382 76.056 1.00 0.39 \ ATOM 217 NH1 ARG Q 23 -18.849 8.447 76.193 1.00 0.39 \ ATOM 218 NH2 ARG Q 23 -19.648 10.340 75.134 1.00 0.39 \ ATOM 219 N SER Q 24 -22.093 15.877 78.160 1.00 -1.00 \ ATOM 220 CA SER Q 24 -21.893 17.128 77.452 1.00 -1.00 \ ATOM 221 C SER Q 24 -22.048 18.336 78.373 1.00 -1.00 \ ATOM 222 O SER Q 24 -22.038 19.480 77.893 1.00 -1.00 \ ATOM 223 CB SER Q 24 -22.858 17.201 76.265 1.00 -1.00 \ ATOM 224 OG SER Q 24 -23.491 18.472 76.188 1.00 -1.00 \ ATOM 225 N LYS Q 25 -22.196 18.107 79.674 1.00 -1.00 \ ATOM 226 CA LYS Q 25 -22.148 19.159 80.675 1.00 -1.00 \ ATOM 227 C LYS Q 25 -20.970 20.126 80.474 1.00 -1.00 \ ATOM 228 O LYS Q 25 -19.887 19.948 81.062 1.00 -1.00 \ ATOM 229 CB LYS Q 25 -22.048 18.532 82.051 1.00 -1.00 \ ATOM 230 CG LYS Q 25 -23.244 18.753 82.906 1.00 -1.00 \ ATOM 231 CD LYS Q 25 -22.914 18.317 84.322 1.00 -1.00 \ ATOM 232 CE LYS Q 25 -22.297 16.928 84.308 1.00 -1.00 \ ATOM 233 NZ LYS Q 25 -22.860 16.068 85.386 1.00 -1.00 \ """, "e5lybQ11_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5lybQ11_csv", state=0, origin=1) cmd.zoom("e5lybQ11_csv", animate=-1)