cmd.read_pdbstr("""\ ATOM 1 N GLU A 331 32.685 -0.998 35.564 1.00 -1.00 \ ATOM 2 CA GLU A 331 32.024 -1.123 36.894 1.00 -1.00 \ ATOM 3 C GLU A 331 32.890 -0.734 38.081 1.00 -1.00 \ ATOM 4 O GLU A 331 32.361 -0.334 39.110 1.00 -1.00 \ ATOM 5 CB GLU A 331 31.441 -2.538 37.118 1.00 -1.00 \ ATOM 6 CG GLU A 331 30.340 -2.921 36.128 1.00 -1.00 \ ATOM 7 CD GLU A 331 29.626 -4.243 36.441 1.00 -1.00 \ ATOM 8 OE1 GLU A 331 30.194 -5.118 37.128 1.00 -1.00 \ ATOM 9 OE2 GLU A 331 28.473 -4.426 35.980 1.00 -1.00 \ ATOM 10 N GLU A 332 34.208 -0.836 37.955 1.00 0.56 \ ATOM 11 CA GLU A 332 35.101 -0.450 39.045 1.00 0.56 \ ATOM 12 C GLU A 332 35.498 1.028 39.057 1.00 0.56 \ ATOM 13 O GLU A 332 36.119 1.474 40.014 1.00 0.56 \ ATOM 14 CB GLU A 332 36.351 -1.340 39.044 1.00 0.56 \ ATOM 15 CG GLU A 332 36.035 -2.774 39.449 1.00 0.56 \ ATOM 16 CD GLU A 332 37.219 -3.713 39.277 1.00 0.56 \ ATOM 17 OE1 GLU A 332 37.917 -3.983 40.286 1.00 0.56 \ ATOM 18 OE2 GLU A 332 37.456 -4.172 38.128 1.00 0.56 \ ATOM 19 N ASN A 333 35.158 1.783 38.015 1.00 -1.70 \ ATOM 20 CA ASN A 333 35.510 3.208 37.937 1.00 -1.70 \ ATOM 21 C ASN A 333 34.338 4.202 37.910 1.00 -1.70 \ ATOM 22 O ASN A 333 34.535 5.380 38.241 1.00 -1.70 \ ATOM 23 CB ASN A 333 36.342 3.470 36.680 1.00 -1.70 \ ATOM 24 CG ASN A 333 37.678 2.757 36.674 1.00 -1.70 \ ATOM 25 OD1 ASN A 333 38.104 2.159 37.662 1.00 -1.70 \ ATOM 26 ND2 ASN A 333 38.372 2.850 35.540 1.00 -1.70 \ ATOM 27 N ILE A 334 33.149 3.767 37.498 1.00 0.56 \ ATOM 28 CA ILE A 334 32.053 4.715 37.250 1.00 0.56 \ ATOM 29 C ILE A 334 31.660 5.502 38.519 1.00 0.56 \ ATOM 30 O ILE A 334 31.504 6.713 38.443 1.00 0.56 \ ATOM 31 CB ILE A 334 30.830 4.091 36.488 1.00 0.56 \ ATOM 32 CG1 ILE A 334 29.794 5.166 36.138 1.00 0.56 \ ATOM 33 CG2 ILE A 334 30.157 2.975 37.266 1.00 0.56 \ ATOM 34 CD1 ILE A 334 28.866 4.785 35.000 1.00 0.56 \ ATOM 35 N ILE A 335 31.563 4.840 39.673 1.00 -1.69 \ ATOM 36 CA ILE A 335 31.148 5.547 40.896 1.00 -1.69 \ ATOM 37 C ILE A 335 32.197 6.582 41.360 1.00 -1.69 \ ATOM 38 O ILE A 335 31.840 7.745 41.590 1.00 -1.69 \ ATOM 39 CB ILE A 335 30.721 4.581 42.048 1.00 -1.69 \ ATOM 40 CG1 ILE A 335 29.548 3.672 41.614 1.00 -1.69 \ ATOM 41 CG2 ILE A 335 30.327 5.365 43.290 1.00 -1.69 \ ATOM 42 CD1 ILE A 335 28.345 4.394 41.049 1.00 -1.69 \ ATOM 43 N PRO A 336 33.483 6.183 41.481 1.00 0.56 \ ATOM 44 CA PRO A 336 34.480 7.211 41.822 1.00 0.56 \ ATOM 45 C PRO A 336 34.640 8.326 40.775 1.00 0.56 \ ATOM 46 O PRO A 336 34.937 9.456 41.157 1.00 0.56 \ ATOM 47 CB PRO A 336 35.797 6.432 42.001 1.00 0.56 \ ATOM 48 CG PRO A 336 35.489 4.994 41.801 1.00 0.56 \ ATOM 49 CD PRO A 336 34.037 4.816 41.485 1.00 0.56 \ ATOM 50 N TYR A 337 34.422 8.029 39.495 1.00 0.56 \ ATOM 51 CA TYR A 337 34.457 9.063 38.459 1.00 0.56 \ ATOM 52 C TYR A 337 33.357 10.112 38.662 1.00 0.56 \ ATOM 53 O TYR A 337 33.612 11.311 38.606 1.00 0.56 \ ATOM 54 CB TYR A 337 34.362 8.439 37.059 1.00 0.56 \ ATOM 55 CG TYR A 337 34.434 9.462 35.935 1.00 0.56 \ ATOM 56 CD1 TYR A 337 35.666 9.910 35.450 1.00 0.56 \ ATOM 57 CD2 TYR A 337 33.270 10.011 35.385 1.00 0.56 \ ATOM 58 CE1 TYR A 337 35.740 10.854 34.427 1.00 0.56 \ ATOM 59 CE2 TYR A 337 33.338 10.955 34.368 1.00 0.56 \ ATOM 60 CZ TYR A 337 34.574 11.367 33.898 1.00 0.56 \ ATOM 61 OH TYR A 337 34.650 12.305 32.901 1.00 0.56 \ ATOM 62 N ILE A 338 32.140 9.655 38.907 1.00 0.56 \ ATOM 63 CA ILE A 338 31.018 10.561 39.135 1.00 0.56 \ ATOM 64 C ILE A 338 31.242 11.399 40.420 1.00 0.56 \ ATOM 65 O ILE A 338 30.953 12.594 40.436 1.00 0.56 \ ATOM 66 CB ILE A 338 29.668 9.795 39.183 1.00 0.56 \ ATOM 67 CG1 ILE A 338 29.363 9.183 37.811 1.00 0.56 \ ATOM 68 CG2 ILE A 338 28.519 10.717 39.602 1.00 0.56 \ ATOM 69 CD1 ILE A 338 28.203 8.205 37.819 1.00 0.56 \ ATOM 70 N THR A 339 31.785 10.785 41.468 1.00 -1.70 \ ATOM 71 CA THR A 339 32.115 11.519 42.701 1.00 -1.70 \ ATOM 72 C THR A 339 33.250 12.537 42.499 1.00 -1.70 \ ATOM 73 O THR A 339 33.126 13.692 42.881 1.00 -1.70 \ ATOM 74 CB THR A 339 32.557 10.572 43.842 1.00 -1.70 \ ATOM 75 OG1 THR A 339 31.548 9.587 44.077 1.00 -1.70 \ ATOM 76 CG2 THR A 339 32.807 11.345 45.123 1.00 -1.70 \ ATOM 77 N ASN A 340 34.354 12.096 41.907 1.00 -1.69 \ ATOM 78 CA ASN A 340 35.587 12.896 41.892 1.00 -1.69 \ ATOM 79 C ASN A 340 35.789 13.769 40.663 1.00 -1.69 \ ATOM 80 O ASN A 340 36.355 14.848 40.774 1.00 -1.69 \ ATOM 81 CB ASN A 340 36.802 11.993 42.059 1.00 -1.69 \ ATOM 82 CG ASN A 340 36.827 11.307 43.404 1.00 -1.69 \ ATOM 83 OD1 ASN A 340 36.559 11.923 44.428 1.00 -1.69 \ ATOM 84 ND2 ASN A 340 37.156 10.021 43.411 1.00 -1.69 \ ATOM 85 N VAL A 341 35.375 13.302 39.495 1.00 0.56 \ ATOM 86 CA VAL A 341 35.560 14.069 38.274 1.00 0.56 \ ATOM 87 C VAL A 341 34.332 14.929 38.012 1.00 0.56 \ ATOM 88 O VAL A 341 34.472 16.128 37.831 1.00 0.56 \ ATOM 89 CB VAL A 341 35.912 13.169 37.078 1.00 0.56 \ ATOM 90 CG1 VAL A 341 36.081 14.003 35.814 1.00 0.56 \ ATOM 91 CG2 VAL A 341 37.184 12.382 37.382 1.00 0.56 \ ATOM 92 N LEU A 342 33.136 14.341 38.019 1.00 0.56 \ ATOM 93 CA LEU A 342 31.894 15.124 37.831 1.00 0.56 \ ATOM 94 C LEU A 342 31.481 15.931 39.051 1.00 0.56 \ ATOM 95 O LEU A 342 30.648 16.838 38.923 1.00 0.56 \ ATOM 96 CB LEU A 342 30.697 14.226 37.487 1.00 0.56 \ ATOM 97 CG LEU A 342 30.511 13.676 36.094 1.00 0.56 \ ATOM 98 CD1 LEU A 342 29.149 12.983 36.031 1.00 0.56 \ ATOM 99 CD2 LEU A 342 30.602 14.780 35.047 1.00 0.56 \ ATOM 100 N GLN A 343 32.000 15.562 40.226 1.00 0.56 \ ATOM 101 CA GLN A 343 31.643 16.203 41.489 1.00 0.56 \ ATOM 102 C GLN A 343 30.143 16.244 41.724 1.00 0.56 \ ATOM 103 O GLN A 343 29.594 17.271 42.124 1.00 0.56 \ ATOM 104 CB GLN A 343 32.253 17.599 41.571 1.00 0.56 \ ATOM 105 CG GLN A 343 33.713 17.607 41.153 1.00 0.56 \ ATOM 106 CD GLN A 343 34.429 18.826 41.669 1.00 0.56 \ ATOM 107 OE1 GLN A 343 34.611 18.981 42.876 1.00 0.56 \ ATOM 108 NE2 GLN A 343 34.820 19.708 40.768 1.00 0.56 \ ATOM 109 N ASN A 344 29.509 15.097 41.492 1.00 0.56 \ ATOM 110 CA ASN A 344 28.087 14.902 41.709 1.00 0.56 \ ATOM 111 C ASN A 344 27.889 13.733 42.682 1.00 0.56 \ ATOM 112 O ASN A 344 27.561 12.626 42.266 1.00 0.56 \ ATOM 113 CB ASN A 344 27.384 14.654 40.358 1.00 0.56 \ ATOM 114 CG ASN A 344 25.875 14.699 40.470 1.00 0.56 \ ATOM 115 OD1 ASN A 344 25.313 14.498 41.543 1.00 0.56 \ ATOM 116 ND2 ASN A 344 25.214 14.983 39.360 1.00 0.56 \ ATOM 117 N PRO A 345 28.085 13.977 43.993 1.00 0.56 \ ATOM 118 CA PRO A 345 27.865 12.892 44.967 1.00 0.56 \ ATOM 119 C PRO A 345 26.447 12.301 45.017 1.00 0.56 \ ATOM 120 O PRO A 345 26.306 11.110 45.313 1.00 0.56 \ ATOM 121 CB PRO A 345 28.278 13.517 46.313 1.00 0.56 \ ATOM 122 CG PRO A 345 28.282 14.981 46.087 1.00 0.56 \ ATOM 123 CD PRO A 345 28.583 15.204 44.640 1.00 0.56 \ ATOM 124 N ASP A 346 25.424 13.113 44.720 0.50 -1.69 \ ATOM 125 CA ASP A 346 24.017 12.667 44.702 0.50 -1.69 \ ATOM 126 C ASP A 346 23.798 11.551 43.675 0.50 -1.69 \ ATOM 127 O ASP A 346 23.246 10.489 43.994 0.50 -1.69 \ ATOM 128 CB ASP A 346 23.089 13.857 44.396 0.50 -1.69 \ ATOM 129 CG ASP A 346 21.651 13.645 44.888 0.50 -1.69 \ ATOM 130 OD1 ASP A 346 20.967 12.711 44.399 0.50 -1.69 \ ATOM 131 OD2 ASP A 346 21.193 14.440 45.756 0.50 -1.69 \ ATOM 132 N LEU A 347 24.247 11.794 42.443 1.00 0.56 \ ATOM 133 CA LEU A 347 24.174 10.771 41.386 1.00 0.56 \ ATOM 134 C LEU A 347 25.006 9.523 41.721 1.00 0.56 \ ATOM 135 O LEU A 347 24.545 8.400 41.515 1.00 0.56 \ ATOM 136 CB LEU A 347 24.629 11.324 40.023 1.00 0.56 \ ATOM 137 CG LEU A 347 24.424 10.379 38.826 1.00 0.56 \ ATOM 138 CD1 LEU A 347 22.950 10.100 38.589 1.00 0.56 \ ATOM 139 CD2 LEU A 347 25.046 10.958 37.569 1.00 0.56 \ ATOM 140 N ALA A 348 26.227 9.733 42.210 1.00 0.56 \ ATOM 141 CA ALA A 348 27.125 8.629 42.569 1.00 0.56 \ ATOM 142 C ALA A 348 26.512 7.681 43.597 1.00 0.56 \ ATOM 143 O ALA A 348 26.592 6.465 43.446 1.00 0.56 \ ATOM 144 CB ALA A 348 28.450 9.161 43.096 1.00 0.56 \ ATOM 145 N LEU A 349 25.901 8.253 44.630 1.00 0.56 \ ATOM 146 CA LEU A 349 25.262 7.461 45.682 1.00 0.56 \ ATOM 147 C LEU A 349 24.072 6.670 45.144 1.00 0.56 \ ATOM 148 O LEU A 349 23.920 5.476 45.453 1.00 0.56 \ ATOM 149 CB LEU A 349 24.828 8.370 46.839 1.00 0.56 \ ATOM 150 CG LEU A 349 24.280 7.704 48.093 1.00 0.56 \ ATOM 151 CD1 LEU A 349 25.312 6.785 48.727 1.00 0.56 \ ATOM 152 CD2 LEU A 349 23.842 8.772 49.085 1.00 0.56 \ ATOM 153 N ARG A 350 23.245 7.337 44.334 1.00 0.56 \ ATOM 154 CA ARG A 350 22.083 6.705 43.722 1.00 0.56 \ ATOM 155 C ARG A 350 22.468 5.524 42.839 1.00 0.56 \ ATOM 156 O ARG A 350 21.917 4.430 42.977 1.00 0.56 \ ATOM 157 CB ARG A 350 21.258 7.705 42.891 1.00 0.56 \ ATOM 158 CG ARG A 350 20.056 7.100 42.161 1.00 0.56 \ ATOM 159 CD ARG A 350 19.128 6.317 43.095 1.00 0.56 \ ATOM 160 NE ARG A 350 17.973 5.740 42.386 1.00 0.56 \ ATOM 161 CZ ARG A 350 17.093 4.892 42.913 1.00 0.56 \ ATOM 162 NH1 ARG A 350 17.174 4.522 44.196 1.00 0.56 \ ATOM 163 NH2 ARG A 350 16.087 4.445 42.162 1.00 0.56 \ ATOM 164 N MET A 351 23.406 5.754 41.925 1.00 -1.70 \ ATOM 165 CA MET A 351 23.831 4.699 41.007 1.00 -1.70 \ ATOM 166 C MET A 351 24.530 3.552 41.722 1.00 -1.70 \ ATOM 167 O MET A 351 24.388 2.413 41.304 1.00 -1.70 \ ATOM 168 CB MET A 351 24.700 5.262 39.866 1.00 -1.70 \ ATOM 169 CG MET A 351 23.861 6.087 38.896 1.00 -1.70 \ ATOM 170 SD MET A 351 24.689 6.709 37.421 1.00 -1.70 \ ATOM 171 CE MET A 351 25.133 5.165 36.649 1.00 -1.70 \ ATOM 172 N ALA A 352 25.252 3.845 42.802 1.00 0.56 \ ATOM 173 CA ALA A 352 25.880 2.800 43.615 1.00 0.56 \ ATOM 174 C ALA A 352 24.870 1.837 44.238 1.00 0.56 \ ATOM 175 O ALA A 352 24.997 0.630 44.056 1.00 0.56 \ ATOM 176 CB ALA A 352 26.770 3.408 44.693 1.00 0.56 \ ATOM 177 N VAL A 353 23.866 2.366 44.940 1.00 0.56 \ ATOM 178 CA VAL A 353 22.869 1.519 45.608 1.00 0.56 \ ATOM 179 C VAL A 353 21.894 0.903 44.624 1.00 0.56 \ ATOM 180 O VAL A 353 21.507 -0.236 44.807 1.00 0.56 \ ATOM 181 CB VAL A 353 22.093 2.233 46.768 1.00 0.56 \ ATOM 182 CG1 VAL A 353 23.073 2.819 47.777 1.00 0.56 \ ATOM 183 CG2 VAL A 353 21.139 3.305 46.256 1.00 0.56 \ ATOM 184 N ARG A 354 21.520 1.643 43.575 1.00 0.56 \ ATOM 185 CA ARG A 354 20.569 1.164 42.570 1.00 0.56 \ ATOM 186 C ARG A 354 21.058 -0.075 41.797 1.00 0.56 \ ATOM 187 O ARG A 354 20.271 -0.973 41.541 1.00 0.56 \ ATOM 188 CB ARG A 354 20.252 2.295 41.573 1.00 0.56 \ ATOM 189 CG ARG A 354 19.210 1.985 40.517 1.00 0.56 \ ATOM 190 CD ARG A 354 18.999 3.182 39.613 1.00 0.56 \ ATOM 191 NE ARG A 354 20.012 3.243 38.553 1.00 0.56 \ ATOM 192 CZ ARG A 354 20.285 4.317 37.816 1.00 0.56 \ ATOM 193 NH1 ARG A 354 19.634 5.465 38.008 1.00 0.56 \ ATOM 194 NH2 ARG A 354 21.220 4.231 36.869 1.00 0.56 \ ATOM 195 N ASN A 355 22.329 -0.091 41.392 1.00 0.56 \ ATOM 196 CA ASN A 355 22.889 -1.197 40.596 1.00 0.56 \ ATOM 197 C ASN A 355 23.970 -1.983 41.340 1.00 0.56 \ ATOM 198 O ASN A 355 24.757 -2.710 40.712 1.00 0.56 \ ATOM 199 CB ASN A 355 23.438 -0.688 39.247 1.00 0.56 \ ATOM 200 CG ASN A 355 22.503 0.290 38.563 1.00 0.56 \ ATOM 201 OD1 ASN A 355 22.816 1.480 38.472 1.00 0.56 \ ATOM 202 ND2 ASN A 355 21.338 -0.197 38.089 1.00 0.56 \ ATOM 203 N ASN A 356 23.983 -1.848 42.667 1.00 -1.00 \ ATOM 204 CA ASN A 356 24.895 -2.556 43.557 1.00 -1.00 \ ATOM 205 C ASN A 356 26.390 -2.464 43.186 1.00 -1.00 \ ATOM 206 O ASN A 356 27.134 -3.443 43.305 1.00 -1.00 \ ATOM 207 CB ASN A 356 24.413 -4.005 43.723 1.00 -1.00 \ ATOM 208 CG ASN A 356 22.981 -4.079 44.262 1.00 -1.00 \ ATOM 209 OD1 ASN A 356 22.653 -3.460 45.275 1.00 -1.00 \ ATOM 210 ND2 ASN A 356 22.121 -4.812 43.577 1.00 -1.00 \ ATOM 211 N LEU A 357 26.812 -1.266 42.770 1.00 -1.00 \ ATOM 212 CA LEU A 357 28.212 -0.976 42.402 1.00 -1.00 \ ATOM 213 C LEU A 357 29.042 -0.495 43.595 1.00 -1.00 \ ATOM 214 O LEU A 357 28.506 0.028 44.571 1.00 -1.00 \ ATOM 215 CB LEU A 357 28.274 0.080 41.297 1.00 -1.00 \ ATOM 216 CG LEU A 357 27.493 -0.213 40.023 1.00 -1.00 \ ATOM 217 CD1 LEU A 357 27.458 1.008 39.113 1.00 -1.00 \ ATOM 218 CD2 LEU A 357 28.085 -1.403 39.281 1.00 -1.00 \ ATOM 219 N ALA A 358 30.360 -0.672 43.494 1.00 -1.00 \ ATOM 220 CA ALA A 358 31.311 -0.269 44.535 1.00 -1.00 \ ATOM 221 C ALA A 358 31.831 1.158 44.297 1.00 -1.00 \ ATOM 222 O ALA A 358 31.890 1.600 43.157 1.00 -1.00 \ ATOM 223 CB ALA A 358 32.477 -1.246 44.571 1.00 -1.00 \ ATOM 224 N GLY A 359 32.189 1.867 45.377 1.00 -1.00 \ ATOM 225 CA GLY A 359 32.914 3.155 45.287 1.00 -1.00 \ ATOM 226 C GLY A 359 32.317 4.406 45.940 1.00 -1.00 \ ATOM 227 O GLY A 359 32.972 5.467 45.931 1.00 -1.00 \ ATOM 228 N ALA A 360 31.094 4.311 46.484 1.00 -1.00 \ ATOM 229 CA ALA A 360 30.436 5.454 47.160 1.00 -1.00 \ ATOM 230 C ALA A 360 30.510 5.355 48.699 1.00 -1.00 \ ATOM 231 O ALA A 360 29.812 6.093 49.412 1.00 -1.00 \ ATOM 232 CB ALA A 360 28.987 5.600 46.690 1.00 -1.00 \ ATOM 233 N GLU A 361 31.378 4.453 49.178 1.00 -1.00 \ ATOM 234 CA GLU A 361 31.726 4.289 50.597 1.00 -1.00 \ ATOM 235 C GLU A 361 32.327 5.593 51.145 1.00 -1.00 \ ATOM 236 O GLU A 361 32.110 5.938 52.304 1.00 -1.00 \ ATOM 237 CB GLU A 361 32.724 3.115 50.789 1.00 -1.00 \ ATOM 238 CG GLU A 361 32.155 1.689 50.664 1.00 -1.00 \ ATOM 239 CD GLU A 361 31.813 1.235 49.238 1.00 -1.00 \ ATOM 240 OE1 GLU A 361 32.504 1.638 48.264 1.00 -1.00 \ ATOM 241 OE2 GLU A 361 30.835 0.458 49.083 1.00 -1.00 \ ATOM 242 N GLU A 362 33.090 6.290 50.299 1.00 -1.00 \ ATOM 243 CA GLU A 362 33.607 7.628 50.589 1.00 -1.00 \ ATOM 244 C GLU A 362 33.182 8.594 49.476 1.00 -1.00 \ ATOM 245 O GLU A 362 33.339 8.282 48.282 1.00 -1.00 \ ATOM 246 CB GLU A 362 35.130 7.588 50.738 1.00 -1.00 \ ATOM 247 CG GLU A 362 35.600 6.505 51.701 1.00 -1.00 \ ATOM 248 CD GLU A 362 36.858 6.881 52.445 1.00 -1.00 \ ATOM 249 OE1 GLU A 362 37.871 7.195 51.783 1.00 -1.00 \ ATOM 250 OE2 GLU A 362 36.830 6.863 53.696 1.00 -1.00 \ ATOM 251 N LEU A 363 32.632 9.749 49.875 1.00 -1.00 \ ATOM 252 CA LEU A 363 31.998 10.720 48.959 1.00 -1.00 \ ATOM 253 C LEU A 363 32.621 12.124 49.070 1.00 -1.00 \ ATOM 254 O LEU A 363 32.354 12.997 48.240 1.00 -1.00 \ ATOM 255 CB LEU A 363 30.483 10.801 49.230 1.00 -1.00 \ ATOM 256 CG LEU A 363 29.597 9.602 48.858 1.00 -1.00 \ ATOM 257 CD1 LEU A 363 28.199 9.785 49.433 1.00 -1.00 \ ATOM 258 CD2 LEU A 363 29.535 9.388 47.339 1.00 -1.00 \ ATOM 259 OXT LEU A 363 33.393 12.434 49.982 1.00 -1.00 \ """, "e5m5sA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5m5sA2_csv", state=0, origin=1) cmd.zoom("e5m5sA2_csv", animate=-1)