cmd.read_pdbstr("""\ ATOM 1 N GLU A 331 31.180 -0.878 36.125 1.00 -1.00 \ ATOM 2 CA GLU A 331 30.347 -1.081 37.297 1.00 -1.00 \ ATOM 3 C GLU A 331 31.021 -0.700 38.615 1.00 -1.00 \ ATOM 4 O GLU A 331 30.324 -0.385 39.550 1.00 -1.00 \ ATOM 5 CB GLU A 331 29.806 -2.512 37.381 1.00 -1.00 \ ATOM 6 CG GLU A 331 28.813 -2.806 36.246 1.00 -1.00 \ ATOM 7 CD GLU A 331 28.105 -4.153 36.385 1.00 -1.00 \ ATOM 8 OE1 GLU A 331 28.750 -5.085 36.878 1.00 -1.00 \ ATOM 9 OE2 GLU A 331 26.916 -4.284 35.964 1.00 -1.00 \ ATOM 10 N GLU A 332 32.341 -0.746 38.651 1.00 0.56 \ ATOM 11 CA GLU A 332 33.103 -0.368 39.831 1.00 0.56 \ ATOM 12 C GLU A 332 33.387 1.107 39.917 1.00 0.56 \ ATOM 13 O GLU A 332 33.755 1.606 40.998 1.00 0.56 \ ATOM 14 CB GLU A 332 34.463 -1.063 39.851 1.00 0.56 \ ATOM 15 CG GLU A 332 34.425 -2.566 40.048 1.00 0.56 \ ATOM 16 CD GLU A 332 35.838 -3.152 40.205 1.00 0.56 \ ATOM 17 OE1 GLU A 332 36.778 -2.434 40.645 1.00 0.56 \ ATOM 18 OE2 GLU A 332 36.022 -4.345 39.873 1.00 0.56 \ ATOM 19 N ASN A 333 33.325 1.798 38.793 1.00 -1.70 \ ATOM 20 CA ASN A 333 33.675 3.211 38.731 1.00 -1.70 \ ATOM 21 C ASN A 333 32.532 4.208 38.638 1.00 -1.70 \ ATOM 22 O ASN A 333 32.722 5.387 38.999 1.00 -1.70 \ ATOM 23 CB ASN A 333 34.551 3.495 37.527 1.00 -1.70 \ ATOM 24 CG ASN A 333 35.883 2.791 37.565 1.00 -1.70 \ ATOM 25 OD1 ASN A 333 36.312 2.225 38.571 1.00 -1.70 \ ATOM 26 ND2 ASN A 333 36.575 2.866 36.442 1.00 -1.70 \ ATOM 27 N ILE A 334 31.379 3.784 38.124 1.00 0.56 \ ATOM 28 CA ILE A 334 30.346 4.751 37.795 1.00 0.56 \ ATOM 29 C ILE A 334 29.883 5.572 39.015 1.00 0.56 \ ATOM 30 O ILE A 334 29.739 6.777 38.912 1.00 0.56 \ ATOM 31 CB ILE A 334 29.165 4.136 37.019 1.00 0.56 \ ATOM 32 CG1 ILE A 334 28.227 5.248 36.556 1.00 0.56 \ ATOM 33 CG2 ILE A 334 28.400 3.120 37.852 1.00 0.56 \ ATOM 34 CD1 ILE A 334 27.320 4.851 35.430 1.00 0.56 \ ATOM 35 N ILE A 335 29.692 4.925 40.159 1.00 -1.69 \ ATOM 36 CA ILE A 335 29.173 5.613 41.341 1.00 -1.69 \ ATOM 37 C ILE A 335 30.196 6.617 41.898 1.00 -1.69 \ ATOM 38 O ILE A 335 29.862 7.803 42.059 1.00 -1.69 \ ATOM 39 CB ILE A 335 28.694 4.608 42.418 1.00 -1.69 \ ATOM 40 CG1 ILE A 335 27.553 3.755 41.862 1.00 -1.69 \ ATOM 41 CG2 ILE A 335 28.227 5.325 43.674 1.00 -1.69 \ ATOM 42 CD1 ILE A 335 26.410 4.538 41.248 1.00 -1.69 \ ATOM 43 N PRO A 336 31.450 6.185 42.133 1.00 0.56 \ ATOM 44 CA PRO A 336 32.452 7.191 42.577 1.00 0.56 \ ATOM 45 C PRO A 336 32.717 8.267 41.533 1.00 0.56 \ ATOM 46 O PRO A 336 33.030 9.383 41.915 1.00 0.56 \ ATOM 47 CB PRO A 336 33.739 6.383 42.816 1.00 0.56 \ ATOM 48 CG PRO A 336 33.423 4.967 42.566 1.00 0.56 \ ATOM 49 CD PRO A 336 32.000 4.809 42.138 1.00 0.56 \ ATOM 50 N TYR A 337 32.537 7.970 40.241 1.00 0.56 \ ATOM 51 CA TYR A 337 32.646 9.015 39.223 1.00 0.56 \ ATOM 52 C TYR A 337 31.590 10.094 39.419 1.00 0.56 \ ATOM 53 O TYR A 337 31.898 11.295 39.413 1.00 0.56 \ ATOM 54 CB TYR A 337 32.526 8.433 37.802 1.00 0.56 \ ATOM 55 CG TYR A 337 32.716 9.480 36.744 1.00 0.56 \ ATOM 56 CD1 TYR A 337 34.002 9.872 36.354 1.00 0.56 \ ATOM 57 CD2 TYR A 337 31.638 10.124 36.167 1.00 0.56 \ ATOM 58 CE1 TYR A 337 34.188 10.850 35.384 1.00 0.56 \ ATOM 59 CE2 TYR A 337 31.826 11.108 35.213 1.00 0.56 \ ATOM 60 CZ TYR A 337 33.099 11.462 34.846 1.00 0.56 \ ATOM 61 OH TYR A 337 33.296 12.427 33.903 1.00 0.56 \ ATOM 62 N ILE A 338 30.345 9.674 39.576 1.00 0.56 \ ATOM 63 CA ILE A 338 29.231 10.614 39.710 1.00 0.56 \ ATOM 64 C ILE A 338 29.376 11.430 41.025 1.00 0.56 \ ATOM 65 O ILE A 338 29.122 12.627 41.071 1.00 0.56 \ ATOM 66 CB ILE A 338 27.875 9.872 39.637 1.00 0.56 \ ATOM 67 CG1 ILE A 338 27.679 9.309 38.223 1.00 0.56 \ ATOM 68 CG2 ILE A 338 26.675 10.767 39.969 1.00 0.56 \ ATOM 69 CD1 ILE A 338 26.632 8.234 38.126 1.00 0.56 \ ATOM 70 N THR A 339 29.777 10.772 42.089 1.00 -1.70 \ ATOM 71 CA THR A 339 29.980 11.450 43.402 1.00 -1.70 \ ATOM 72 C THR A 339 31.086 12.485 43.313 1.00 -1.70 \ ATOM 73 O THR A 339 30.898 13.634 43.734 1.00 -1.70 \ ATOM 74 CB THR A 339 30.346 10.430 44.470 1.00 -1.70 \ ATOM 75 OG1 THR A 339 29.237 9.539 44.662 1.00 -1.70 \ ATOM 76 CG2 THR A 339 30.695 11.092 45.835 1.00 -1.70 \ ATOM 77 N ASN A 340 32.227 12.090 42.768 1.00 -1.69 \ ATOM 78 CA ASN A 340 33.455 12.889 42.857 1.00 -1.69 \ ATOM 79 C ASN A 340 33.784 13.792 41.676 1.00 -1.69 \ ATOM 80 O ASN A 340 34.330 14.880 41.868 1.00 -1.69 \ ATOM 81 CB ASN A 340 34.642 11.948 43.098 1.00 -1.69 \ ATOM 82 CG ASN A 340 34.528 11.221 44.427 1.00 -1.69 \ ATOM 83 OD1 ASN A 340 34.235 11.832 45.416 1.00 -1.69 \ ATOM 84 ND2 ASN A 340 34.787 9.931 44.448 1.00 -1.69 \ ATOM 85 N VAL A 341 33.511 13.340 40.461 1.00 0.56 \ ATOM 86 CA VAL A 341 33.839 14.120 39.293 1.00 0.56 \ ATOM 87 C VAL A 341 32.640 15.001 38.946 1.00 0.56 \ ATOM 88 O VAL A 341 32.799 16.185 38.714 1.00 0.56 \ ATOM 89 CB VAL A 341 34.281 13.201 38.116 1.00 0.56 \ ATOM 90 CG1 VAL A 341 34.539 14.021 36.853 1.00 0.56 \ ATOM 91 CG2 VAL A 341 35.509 12.382 38.503 1.00 0.56 \ ATOM 92 N LEU A 342 31.429 14.442 38.923 1.00 0.56 \ ATOM 93 CA LEU A 342 30.231 15.230 38.676 1.00 0.56 \ ATOM 94 C LEU A 342 29.759 15.956 39.896 1.00 0.56 \ ATOM 95 O LEU A 342 28.879 16.773 39.776 1.00 0.56 \ ATOM 96 CB LEU A 342 29.063 14.349 38.222 1.00 0.56 \ ATOM 97 CG LEU A 342 29.185 13.658 36.914 1.00 0.56 \ ATOM 98 CD1 LEU A 342 27.803 13.109 36.557 1.00 0.56 \ ATOM 99 CD2 LEU A 342 29.688 14.612 35.835 1.00 0.56 \ ATOM 100 N GLN A 343 30.289 15.639 41.078 1.00 0.56 \ ATOM 101 CA GLN A 343 29.878 16.292 42.320 1.00 0.56 \ ATOM 102 C GLN A 343 28.357 16.178 42.509 1.00 0.56 \ ATOM 103 O GLN A 343 27.684 17.133 42.918 1.00 0.56 \ ATOM 104 CB GLN A 343 30.367 17.757 42.386 1.00 0.56 \ ATOM 105 CG GLN A 343 31.884 17.902 42.406 1.00 0.56 \ ATOM 106 CD GLN A 343 32.526 17.609 43.757 1.00 0.56 \ ATOM 107 OE1 GLN A 343 32.028 18.039 44.819 1.00 0.56 \ ATOM 108 NE2 GLN A 343 33.672 16.924 43.733 1.00 0.56 \ ATOM 109 N ASN A 344 27.819 14.995 42.206 1.00 0.56 \ ATOM 110 CA ASN A 344 26.385 14.764 42.301 1.00 0.56 \ ATOM 111 C ASN A 344 26.069 13.557 43.208 1.00 0.56 \ ATOM 112 O ASN A 344 25.656 12.508 42.727 1.00 0.56 \ ATOM 113 CB ASN A 344 25.808 14.606 40.910 1.00 0.56 \ ATOM 114 CG ASN A 344 24.285 14.682 40.880 1.00 0.56 \ ATOM 115 OD1 ASN A 344 23.621 14.507 41.888 1.00 0.56 \ ATOM 116 ND2 ASN A 344 23.741 14.932 39.707 1.00 0.56 \ ATOM 117 N PRO A 345 26.273 13.703 44.536 1.00 0.56 \ ATOM 118 CA PRO A 345 26.048 12.556 45.434 1.00 0.56 \ ATOM 119 C PRO A 345 24.618 12.074 45.460 1.00 0.56 \ ATOM 120 O PRO A 345 24.351 10.876 45.696 1.00 0.56 \ ATOM 121 CB PRO A 345 26.440 13.082 46.827 1.00 0.56 \ ATOM 122 CG PRO A 345 26.477 14.551 46.698 1.00 0.56 \ ATOM 123 CD PRO A 345 26.817 14.859 45.270 1.00 0.56 \ ATOM 124 N ASP A 346 23.691 12.969 45.180 0.80 -1.69 \ ATOM 125 CA ASP A 346 22.301 12.558 45.116 0.80 -1.69 \ ATOM 126 C ASP A 346 22.038 11.542 43.999 0.80 -1.69 \ ATOM 127 O ASP A 346 21.441 10.469 44.229 0.80 -1.69 \ ATOM 128 CB ASP A 346 21.439 13.789 45.001 0.80 -1.69 \ ATOM 129 CG ASP A 346 20.001 13.475 45.111 0.80 -1.69 \ ATOM 130 OD1 ASP A 346 19.417 13.251 44.050 0.80 -1.69 \ ATOM 131 OD2 ASP A 346 19.468 13.482 46.263 0.80 -1.69 \ ATOM 132 N LEU A 347 22.497 11.841 42.791 1.00 0.56 \ ATOM 133 CA LEU A 347 22.363 10.865 41.700 1.00 0.56 \ ATOM 134 C LEU A 347 23.176 9.594 41.990 1.00 0.56 \ ATOM 135 O LEU A 347 22.715 8.465 41.769 1.00 0.56 \ ATOM 136 CB LEU A 347 22.800 11.469 40.348 1.00 0.56 \ ATOM 137 CG LEU A 347 22.723 10.578 39.126 1.00 0.56 \ ATOM 138 CD1 LEU A 347 21.309 10.112 38.835 1.00 0.56 \ ATOM 139 CD2 LEU A 347 23.313 11.269 37.905 1.00 0.56 \ ATOM 140 N ALA A 348 24.368 9.784 42.523 1.00 0.56 \ ATOM 141 CA ALA A 348 25.226 8.653 42.857 1.00 0.56 \ ATOM 142 C ALA A 348 24.556 7.693 43.797 1.00 0.56 \ ATOM 143 O ALA A 348 24.555 6.499 43.542 1.00 0.56 \ ATOM 144 CB ALA A 348 26.542 9.110 43.438 1.00 0.56 \ ATOM 145 N LEU A 349 23.950 8.211 44.860 1.00 0.56 \ ATOM 146 CA LEU A 349 23.316 7.349 45.870 1.00 0.56 \ ATOM 147 C LEU A 349 22.086 6.662 45.277 1.00 0.56 \ ATOM 148 O LEU A 349 21.863 5.465 45.498 1.00 0.56 \ ATOM 149 CB LEU A 349 22.957 8.138 47.111 1.00 0.56 \ ATOM 150 CG LEU A 349 22.204 7.415 48.214 1.00 0.56 \ ATOM 151 CD1 LEU A 349 22.998 6.187 48.678 1.00 0.56 \ ATOM 152 CD2 LEU A 349 21.963 8.378 49.356 1.00 0.56 \ ATOM 153 N ARG A 350 21.287 7.414 44.525 1.00 0.56 \ ATOM 154 CA ARG A 350 20.117 6.820 43.874 1.00 0.56 \ ATOM 155 C ARG A 350 20.512 5.682 42.940 1.00 0.56 \ ATOM 156 O ARG A 350 19.919 4.591 42.999 1.00 0.56 \ ATOM 157 CB ARG A 350 19.378 7.891 43.088 1.00 0.56 \ ATOM 158 CG ARG A 350 18.256 7.373 42.215 1.00 0.56 \ ATOM 159 CD ARG A 350 17.196 6.592 42.967 1.00 0.56 \ ATOM 160 NE ARG A 350 16.213 6.148 41.972 1.00 0.56 \ ATOM 161 CZ ARG A 350 15.480 5.035 42.042 1.00 0.56 \ ATOM 162 NH1 ARG A 350 15.568 4.192 43.088 1.00 0.56 \ ATOM 163 NH2 ARG A 350 14.644 4.771 41.032 1.00 0.56 \ ATOM 164 N MET A 351 21.517 5.900 42.098 1.00 -1.70 \ ATOM 165 CA MET A 351 21.880 4.871 41.131 1.00 -1.70 \ ATOM 166 C MET A 351 22.486 3.665 41.827 1.00 -1.70 \ ATOM 167 O MET A 351 22.256 2.525 41.419 1.00 -1.70 \ ATOM 168 CB MET A 351 22.831 5.429 40.079 1.00 -1.70 \ ATOM 169 CG MET A 351 22.167 6.457 39.179 1.00 -1.70 \ ATOM 170 SD MET A 351 23.163 7.026 37.767 1.00 -1.70 \ ATOM 171 CE MET A 351 23.784 5.453 37.209 1.00 -1.70 \ ATOM 172 N ALA A 352 23.275 3.904 42.871 1.00 0.56 \ ATOM 173 CA ALA A 352 23.869 2.833 43.657 1.00 0.56 \ ATOM 174 C ALA A 352 22.835 1.818 44.183 1.00 0.56 \ ATOM 175 O ALA A 352 22.958 0.597 43.951 1.00 0.56 \ ATOM 176 CB ALA A 352 24.699 3.400 44.790 1.00 0.56 \ ATOM 177 N VAL A 353 21.780 2.308 44.806 1.00 0.56 \ ATOM 178 CA VAL A 353 20.752 1.433 45.352 1.00 0.56 \ ATOM 179 C VAL A 353 19.791 0.967 44.257 1.00 0.56 \ ATOM 180 O VAL A 353 19.302 -0.171 44.305 1.00 0.56 \ ATOM 181 CB VAL A 353 19.986 2.069 46.540 1.00 0.56 \ ATOM 182 CG1 VAL A 353 20.933 2.417 47.664 1.00 0.56 \ ATOM 183 CG2 VAL A 353 19.235 3.322 46.134 1.00 0.56 \ ATOM 184 N ARG A 354 19.534 1.807 43.250 1.00 0.56 \ ATOM 185 CA ARG A 354 18.576 1.454 42.201 1.00 0.56 \ ATOM 186 C ARG A 354 19.066 0.244 41.408 1.00 0.56 \ ATOM 187 O ARG A 354 18.265 -0.637 41.072 1.00 0.56 \ ATOM 188 CB ARG A 354 18.363 2.623 41.248 1.00 0.56 \ ATOM 189 CG ARG A 354 17.354 2.415 40.117 1.00 0.56 \ ATOM 190 CD ARG A 354 17.317 3.650 39.236 1.00 0.56 \ ATOM 191 NE ARG A 354 18.492 3.738 38.371 1.00 0.56 \ ATOM 192 CZ ARG A 354 18.823 4.791 37.629 1.00 0.56 \ ATOM 193 NH1 ARG A 354 18.071 5.877 37.617 1.00 0.56 \ ATOM 194 NH2 ARG A 354 19.881 4.716 36.843 1.00 0.56 \ ATOM 195 N ASN A 355 20.362 0.189 41.126 1.00 0.56 \ ATOM 196 CA ASN A 355 20.892 -0.874 40.247 1.00 0.56 \ ATOM 197 C ASN A 355 21.958 -1.724 40.930 1.00 0.56 \ ATOM 198 O ASN A 355 22.744 -2.375 40.262 1.00 0.56 \ ATOM 199 CB ASN A 355 21.439 -0.250 38.964 1.00 0.56 \ ATOM 200 CG ASN A 355 20.429 0.640 38.289 1.00 0.56 \ ATOM 201 OD1 ASN A 355 20.551 1.852 38.360 1.00 0.56 \ ATOM 202 ND2 ASN A 355 19.399 0.041 37.643 1.00 0.56 \ ATOM 203 N ASN A 356 21.999 -1.691 42.255 1.00 -1.00 \ ATOM 204 CA ASN A 356 22.857 -2.578 43.027 1.00 -1.00 \ ATOM 205 C ASN A 356 24.335 -2.439 42.639 1.00 -1.00 \ ATOM 206 O ASN A 356 25.029 -3.425 42.371 1.00 -1.00 \ ATOM 207 CB ASN A 356 22.342 -4.030 42.898 1.00 -1.00 \ ATOM 208 CG ASN A 356 22.914 -4.968 43.962 1.00 -1.00 \ ATOM 209 OD1 ASN A 356 23.497 -4.542 44.967 1.00 -1.00 \ ATOM 210 ND2 ASN A 356 22.738 -6.263 43.744 1.00 -1.00 \ ATOM 211 N LEU A 357 24.811 -1.193 42.631 1.00 -1.00 \ ATOM 212 CA LEU A 357 26.188 -0.849 42.295 1.00 -1.00 \ ATOM 213 C LEU A 357 26.951 -0.402 43.549 1.00 -1.00 \ ATOM 214 O LEU A 357 26.393 0.259 44.451 1.00 -1.00 \ ATOM 215 CB LEU A 357 26.219 0.247 41.240 1.00 -1.00 \ ATOM 216 CG LEU A 357 25.618 -0.096 39.884 1.00 -1.00 \ ATOM 217 CD1 LEU A 357 25.307 1.158 39.066 1.00 -1.00 \ ATOM 218 CD2 LEU A 357 26.554 -1.029 39.095 1.00 -1.00 \ ATOM 219 N ALA A 358 28.227 -0.781 43.606 1.00 -1.00 \ ATOM 220 CA ALA A 358 29.102 -0.452 44.723 1.00 -1.00 \ ATOM 221 C ALA A 358 29.611 0.988 44.595 1.00 -1.00 \ ATOM 222 O ALA A 358 29.719 1.517 43.492 1.00 -1.00 \ ATOM 223 CB ALA A 358 30.294 -1.398 44.737 1.00 -1.00 \ ATOM 224 N GLY A 359 29.920 1.622 45.726 1.00 -1.00 \ ATOM 225 CA GLY A 359 30.597 2.910 45.691 1.00 -1.00 \ ATOM 226 C GLY A 359 29.934 4.058 46.434 1.00 -1.00 \ ATOM 227 O GLY A 359 30.577 5.106 46.582 1.00 -1.00 \ ATOM 228 N ALA A 360 28.692 3.887 46.922 1.00 -1.00 \ ATOM 229 CA ALA A 360 27.994 4.972 47.636 1.00 -1.00 \ ATOM 230 C ALA A 360 27.989 4.787 49.159 1.00 -1.00 \ ATOM 231 O ALA A 360 27.219 5.477 49.905 1.00 -1.00 \ ATOM 232 CB ALA A 360 26.583 5.128 47.100 1.00 -1.00 \ ATOM 233 N GLU A 361 28.861 3.865 49.598 1.00 -1.00 \ ATOM 234 CA GLU A 361 29.201 3.657 51.001 1.00 -1.00 \ ATOM 235 C GLU A 361 29.894 4.920 51.526 1.00 -1.00 \ ATOM 236 O GLU A 361 29.865 5.167 52.731 1.00 -1.00 \ ATOM 237 CB GLU A 361 30.106 2.390 51.199 1.00 -1.00 \ ATOM 238 CG GLU A 361 29.452 0.988 50.970 1.00 -1.00 \ ATOM 239 CD GLU A 361 29.101 0.636 49.523 1.00 -1.00 \ ATOM 240 OE1 GLU A 361 29.922 0.949 48.607 1.00 -1.00 \ ATOM 241 OE2 GLU A 361 27.991 0.052 49.281 1.00 -1.00 \ ATOM 242 N GLU A 362 30.513 5.704 50.625 1.00 -1.00 \ ATOM 243 CA GLU A 362 31.080 7.018 50.943 1.00 -1.00 \ ATOM 244 C GLU A 362 30.735 8.061 49.876 1.00 -1.00 \ ATOM 245 O GLU A 362 31.013 7.839 48.684 1.00 -1.00 \ ATOM 246 CB GLU A 362 32.593 6.915 51.042 1.00 -1.00 \ ATOM 247 CG GLU A 362 33.074 5.849 52.013 1.00 -1.00 \ ATOM 248 CD GLU A 362 34.517 6.065 52.398 1.00 -1.00 \ ATOM 249 OE1 GLU A 362 35.388 5.870 51.513 1.00 -1.00 \ ATOM 250 OE2 GLU A 362 34.765 6.450 53.566 1.00 -1.00 \ ATOM 251 N LEU A 363 30.152 9.188 50.298 1.00 -1.00 \ ATOM 252 CA LEU A 363 29.581 10.232 49.391 1.00 -1.00 \ ATOM 253 C LEU A 363 30.164 11.653 49.628 1.00 -1.00 \ ATOM 254 O LEU A 363 29.691 12.673 49.075 1.00 -1.00 \ ATOM 255 CB LEU A 363 28.066 10.312 49.573 1.00 -1.00 \ ATOM 256 CG LEU A 363 27.258 9.067 49.240 1.00 -1.00 \ ATOM 257 CD1 LEU A 363 25.880 9.179 49.882 1.00 -1.00 \ ATOM 258 CD2 LEU A 363 27.184 8.885 47.717 1.00 -1.00 \ ATOM 259 OXT LEU A 363 31.103 11.814 50.398 1.00 -1.00 \ """, "e5m5tA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5m5tA2_csv", state=0, origin=1) cmd.zoom("e5m5tA2_csv", animate=-1)