cmd.read_pdbstr("""\ ATOM 1 N VAL X 2 110.962 116.362 0.033 1.00 -1.00 \ ATOM 2 CA VAL X 2 112.241 116.264 0.805 1.00 -1.00 \ ATOM 3 C VAL X 2 113.360 115.598 0.005 1.00 -1.00 \ ATOM 4 O VAL X 2 113.359 115.637 -1.216 1.00 -1.00 \ ATOM 5 N ASN X 3 114.307 114.984 0.712 1.00 -0.48 \ ATOM 6 CA ASN X 3 115.379 114.279 0.064 1.00 -0.48 \ ATOM 7 C ASN X 3 114.846 112.968 -0.531 1.00 -0.48 \ ATOM 8 O ASN X 3 115.259 112.614 -1.638 1.00 -0.48 \ ATOM 9 CB ASN X 3 116.617 114.122 0.961 1.00 -0.48 \ ATOM 10 CG ASN X 3 116.772 112.730 1.548 1.00 -0.48 \ ATOM 11 OD1 ASN X 3 115.918 112.281 2.327 1.00 -0.48 \ ATOM 12 ND2 ASN X 3 117.893 112.038 1.203 1.00 -0.48 \ ATOM 13 N GLN X 4 113.891 112.293 0.122 1.00 0.23 \ ATOM 14 CA GLN X 4 113.331 111.054 -0.475 1.00 0.23 \ ATOM 15 C GLN X 4 112.739 111.218 -1.914 1.00 0.23 \ ATOM 16 O GLN X 4 112.932 110.345 -2.790 1.00 0.23 \ ATOM 17 CB GLN X 4 112.314 110.383 0.451 1.00 0.23 \ ATOM 18 N HIS X 5 112.057 112.333 -2.154 1.00 -0.03 \ ATOM 19 CA HIS X 5 111.475 112.663 -3.485 1.00 -0.03 \ ATOM 20 C HIS X 5 112.550 113.033 -4.537 1.00 -0.03 \ ATOM 21 O HIS X 5 112.420 112.689 -5.711 1.00 -0.03 \ ATOM 22 CB HIS X 5 110.503 113.848 -3.358 1.00 -0.03 \ ATOM 23 CG HIS X 5 109.893 114.280 -4.665 1.00 -0.03 \ ATOM 24 ND1 HIS X 5 108.848 113.602 -5.254 1.00 -0.03 \ ATOM 25 CD2 HIS X 5 110.185 115.313 -5.492 1.00 -0.03 \ ATOM 26 CE1 HIS X 5 108.535 114.182 -6.395 1.00 -0.03 \ ATOM 27 NE2 HIS X 5 109.324 115.226 -6.560 1.00 -0.03 \ ATOM 28 N LEU X 6 113.595 113.736 -4.105 1.00 1.17 \ ATOM 29 CA LEU X 6 114.783 113.950 -4.920 1.00 1.17 \ ATOM 30 C LEU X 6 115.556 112.694 -5.218 1.00 1.17 \ ATOM 31 O LEU X 6 116.010 112.551 -6.367 1.00 1.17 \ ATOM 32 CB LEU X 6 115.706 115.024 -4.356 1.00 1.17 \ ATOM 33 CG LEU X 6 115.095 116.414 -4.245 1.00 1.17 \ ATOM 34 CD1 LEU X 6 116.150 117.381 -3.732 1.00 1.17 \ ATOM 35 CD2 LEU X 6 114.478 116.895 -5.573 1.00 1.17 \ ATOM 36 N CYS X 7 115.738 111.798 -4.249 1.00 1.69 \ ATOM 37 CA CYS X 7 116.329 110.471 -4.513 1.00 1.69 \ ATOM 38 C CYS X 7 115.502 109.691 -5.542 1.00 1.69 \ ATOM 39 O CYS X 7 116.048 108.997 -6.437 1.00 1.69 \ ATOM 40 CB CYS X 7 116.485 109.695 -3.224 1.00 1.69 \ ATOM 41 SG CYS X 7 117.040 107.960 -3.351 1.00 1.69 \ ATOM 42 N GLY X 8 114.180 109.837 -5.466 1.00 0.76 \ ATOM 43 CA GLY X 8 113.297 109.186 -6.436 1.00 0.76 \ ATOM 44 C GLY X 8 113.617 109.564 -7.868 1.00 0.76 \ ATOM 45 O GLY X 8 113.600 108.720 -8.725 1.00 0.76 \ ATOM 46 N SER X 9 113.879 110.839 -8.106 1.00 -0.47 \ ATOM 47 CA SER X 9 114.218 111.321 -9.439 1.00 -0.47 \ ATOM 48 C SER X 9 115.521 110.667 -9.949 1.00 -0.47 \ ATOM 49 O SER X 9 115.603 110.276 -11.118 1.00 -0.47 \ ATOM 50 CB SER X 9 114.259 112.818 -9.411 1.00 -0.47 \ ATOM 51 OG SER X 9 114.787 113.300 -10.598 1.00 -0.47 \ ATOM 52 N HIS X 10 116.493 110.437 -9.048 1.00 -0.23 \ ATOM 53 CA HIS X 10 117.697 109.702 -9.402 1.00 -0.23 \ ATOM 54 C HIS X 10 117.438 108.199 -9.689 1.00 -0.23 \ ATOM 55 O HIS X 10 117.965 107.621 -10.669 1.00 -0.23 \ ATOM 56 CB HIS X 10 118.774 109.904 -8.325 1.00 -0.23 \ ATOM 57 CG HIS X 10 119.300 111.309 -8.267 1.00 -0.23 \ ATOM 58 ND1 HIS X 10 120.368 111.717 -9.013 1.00 -0.23 \ ATOM 59 CD2 HIS X 10 118.917 112.386 -7.546 1.00 -0.23 \ ATOM 60 CE1 HIS X 10 120.588 113.004 -8.804 1.00 -0.23 \ ATOM 61 NE2 HIS X 10 119.741 113.426 -7.889 1.00 -0.23 \ ATOM 62 N LEU X 11 116.624 107.577 -8.847 1.00 1.69 \ ATOM 63 CA LEU X 11 116.258 106.196 -9.020 1.00 1.69 \ ATOM 64 C LEU X 11 115.569 105.899 -10.366 1.00 1.69 \ ATOM 65 O LEU X 11 115.851 104.877 -10.969 1.00 1.69 \ ATOM 66 CB LEU X 11 115.301 105.756 -7.905 1.00 1.69 \ ATOM 67 CG LEU X 11 115.866 105.712 -6.503 1.00 1.69 \ ATOM 68 CD1 LEU X 11 114.778 105.318 -5.533 1.00 1.69 \ ATOM 69 CD2 LEU X 11 117.034 104.740 -6.450 1.00 1.69 \ ATOM 70 N VAL X 12 114.677 106.752 -10.849 1.00 0.76 \ ATOM 71 CA VAL X 12 113.982 106.372 -12.088 1.00 0.76 \ ATOM 72 C VAL X 12 114.918 106.538 -13.277 1.00 0.76 \ ATOM 73 O VAL X 12 114.802 105.799 -14.276 1.00 0.76 \ ATOM 74 CB VAL X 12 112.582 107.008 -12.252 1.00 0.76 \ ATOM 75 CG1 VAL X 12 111.633 106.521 -11.164 1.00 0.76 \ ATOM 76 CG2 VAL X 12 112.609 108.511 -12.256 1.00 0.76 \ ATOM 77 N GLU X 13 115.847 107.497 -13.183 1.00 0.64 \ ATOM 78 CA GLU X 13 116.862 107.658 -14.221 1.00 0.64 \ ATOM 79 C GLU X 13 117.821 106.469 -14.208 1.00 0.64 \ ATOM 80 O GLU X 13 118.239 106.011 -15.250 1.00 0.64 \ ATOM 81 CB GLU X 13 117.618 108.988 -14.072 1.00 0.64 \ ATOM 82 CG GLU X 13 118.328 109.474 -15.327 1.00 0.64 \ ATOM 83 CD GLU X 13 119.563 108.676 -15.731 1.00 0.64 \ ATOM 84 OE1 GLU X 13 119.948 108.777 -16.925 1.00 0.64 \ ATOM 85 N ALA X 14 118.188 105.978 -13.038 1.00 0.02 \ ATOM 86 CA ALA X 14 118.972 104.750 -12.967 1.00 0.02 \ ATOM 87 C ALA X 14 118.178 103.556 -13.575 1.00 0.02 \ ATOM 88 O ALA X 14 118.711 102.760 -14.301 1.00 0.02 \ ATOM 89 CB ALA X 14 119.396 104.454 -11.516 1.00 0.02 \ ATOM 90 N LEU X 15 116.892 103.450 -13.255 1.00 1.69 \ ATOM 91 CA LEU X 15 116.130 102.317 -13.742 1.00 1.69 \ ATOM 92 C LEU X 15 115.985 102.444 -15.252 1.00 1.69 \ ATOM 93 O LEU X 15 115.977 101.432 -15.943 1.00 1.69 \ ATOM 94 CB LEU X 15 114.757 102.207 -13.064 1.00 1.69 \ ATOM 95 CG LEU X 15 114.700 101.985 -11.558 1.00 1.69 \ ATOM 96 CD1 LEU X 15 113.249 102.029 -11.096 1.00 1.69 \ ATOM 97 CD2 LEU X 15 115.394 100.692 -11.179 1.00 1.69 \ ATOM 98 N TYR X 16 115.881 103.674 -15.771 1.00 -0.21 \ ATOM 99 CA TYR X 16 115.708 103.862 -17.217 1.00 -0.21 \ ATOM 100 C TYR X 16 116.831 103.180 -18.001 1.00 -0.21 \ ATOM 101 O TYR X 16 116.576 102.516 -19.009 1.00 -0.21 \ ATOM 102 CB TYR X 16 115.602 105.360 -17.572 1.00 -0.21 \ ATOM 103 CG TYR X 16 115.875 105.661 -19.021 1.00 -0.21 \ ATOM 104 CD1 TYR X 16 114.951 105.356 -19.998 1.00 -0.21 \ ATOM 105 CD2 TYR X 16 117.089 106.214 -19.415 1.00 -0.21 \ ATOM 106 CE1 TYR X 16 115.209 105.640 -21.324 1.00 -0.21 \ ATOM 107 CE2 TYR X 16 117.346 106.492 -20.732 1.00 -0.21 \ ATOM 108 CZ TYR X 16 116.399 106.178 -21.675 1.00 -0.21 \ ATOM 109 OH TYR X 16 116.671 106.423 -22.987 1.00 -0.21 \ ATOM 110 N LEU X 17 118.063 103.376 -17.529 1.00 -0.24 \ ATOM 111 CA LEU X 17 119.281 102.868 -18.156 1.00 -0.24 \ ATOM 112 C LEU X 17 119.497 101.354 -17.856 1.00 -0.24 \ ATOM 113 O LEU X 17 119.898 100.596 -18.720 1.00 -0.24 \ ATOM 114 CB LEU X 17 120.496 103.672 -17.679 1.00 -0.24 \ ATOM 115 CG LEU X 17 120.811 104.955 -18.463 1.00 -0.24 \ ATOM 116 CD1 LEU X 17 121.617 105.924 -17.628 1.00 -0.24 \ ATOM 117 CD2 LEU X 17 121.572 104.631 -19.745 1.00 -0.24 \ ATOM 118 N VAL X 18 119.227 100.962 -16.620 1.00 0.30 \ ATOM 119 CA VAL X 18 119.408 99.607 -16.134 1.00 0.30 \ ATOM 120 C VAL X 18 118.437 98.654 -16.846 1.00 0.30 \ ATOM 121 O VAL X 18 118.840 97.628 -17.358 1.00 0.30 \ ATOM 122 CB VAL X 18 119.192 99.554 -14.592 1.00 0.30 \ ATOM 123 CG1 VAL X 18 119.006 98.104 -14.070 1.00 0.30 \ ATOM 124 CG2 VAL X 18 120.346 100.262 -13.883 1.00 0.30 \ ATOM 125 N CYS X 19 117.165 99.001 -16.840 1.00 1.69 \ ATOM 126 CA CYS X 19 116.106 98.153 -17.369 1.00 1.69 \ ATOM 127 C CYS X 19 116.041 98.132 -18.900 1.00 1.69 \ ATOM 128 O CYS X 19 115.600 97.143 -19.473 1.00 1.69 \ ATOM 129 CB CYS X 19 114.768 98.588 -16.792 1.00 1.69 \ ATOM 130 SG CYS X 19 114.744 98.588 -14.988 1.00 1.69 \ ATOM 131 N GLY X 20 116.469 99.204 -19.561 1.00 -0.12 \ ATOM 132 CA GLY X 20 116.659 99.192 -21.023 1.00 -0.12 \ ATOM 133 C GLY X 20 115.327 98.994 -21.715 1.00 -0.12 \ ATOM 134 O GLY X 20 114.334 99.571 -21.289 1.00 -0.12 \ ATOM 135 N GLU X 21 115.312 98.152 -22.751 1.00 0.18 \ ATOM 136 CA GLU X 21 114.099 97.832 -23.514 1.00 0.18 \ ATOM 137 C GLU X 21 112.931 97.323 -22.629 1.00 0.18 \ ATOM 138 O GLU X 21 111.757 97.645 -22.873 1.00 0.18 \ ATOM 139 CB GLU X 21 114.442 96.795 -24.600 1.00 0.18 \ ATOM 140 N ARG X 22 113.270 96.569 -21.583 1.00 -0.58 \ ATOM 141 CA ARG X 22 112.286 95.981 -20.670 1.00 -0.58 \ ATOM 142 C ARG X 22 111.334 96.958 -19.962 1.00 -0.58 \ ATOM 143 O ARG X 22 110.243 96.575 -19.542 1.00 -0.58 \ ATOM 144 CB ARG X 22 113.005 95.156 -19.594 1.00 -0.58 \ ATOM 145 CG ARG X 22 113.816 93.972 -20.118 1.00 -0.58 \ ATOM 146 CD ARG X 22 114.453 93.180 -18.983 1.00 -0.58 \ ATOM 147 NE ARG X 22 115.659 93.845 -18.457 1.00 -0.58 \ ATOM 148 CZ ARG X 22 116.264 93.582 -17.292 1.00 -0.58 \ ATOM 149 NH1 ARG X 22 115.800 92.642 -16.473 1.00 -0.58 \ ATOM 150 NH2 ARG X 22 117.355 94.277 -16.946 1.00 -0.58 \ ATOM 151 N GLY X 23 111.752 98.205 -19.764 1.00 1.69 \ ATOM 152 CA GLY X 23 110.964 99.118 -18.943 1.00 1.69 \ ATOM 153 C GLY X 23 110.863 98.739 -17.467 1.00 1.69 \ ATOM 154 O GLY X 23 111.558 97.851 -16.974 1.00 1.69 \ ATOM 155 N PHE X 24 110.006 99.441 -16.760 1.00 1.16 \ ATOM 156 CA PHE X 24 109.876 99.267 -15.322 1.00 1.16 \ ATOM 157 C PHE X 24 108.639 99.936 -14.821 1.00 1.16 \ ATOM 158 O PHE X 24 108.078 100.786 -15.479 1.00 1.16 \ ATOM 159 CB PHE X 24 111.087 99.879 -14.567 1.00 1.16 \ ATOM 160 CG PHE X 24 111.239 101.380 -14.727 1.00 1.16 \ ATOM 161 CD1 PHE X 24 111.934 101.907 -15.794 1.00 1.16 \ ATOM 162 CD2 PHE X 24 110.685 102.263 -13.788 1.00 1.16 \ ATOM 163 CE1 PHE X 24 112.056 103.283 -15.951 1.00 1.16 \ ATOM 164 CE2 PHE X 24 110.819 103.616 -13.932 1.00 1.16 \ ATOM 165 CZ PHE X 24 111.507 104.132 -15.001 1.00 1.16 \ ATOM 166 N PHE X 25 108.267 99.562 -13.619 1.00 0.51 \ ATOM 167 CA PHE X 25 107.171 100.129 -12.879 1.00 0.51 \ ATOM 168 C PHE X 25 107.794 100.858 -11.692 1.00 0.51 \ ATOM 169 O PHE X 25 108.605 100.282 -10.959 1.00 0.51 \ ATOM 170 CB PHE X 25 106.271 99.009 -12.332 1.00 0.51 \ ATOM 171 CG PHE X 25 104.928 98.920 -12.994 1.00 0.51 \ ATOM 172 CD1 PHE X 25 104.802 98.378 -14.283 1.00 0.51 \ ATOM 173 CD2 PHE X 25 103.775 99.359 -12.327 1.00 0.51 \ ATOM 174 CE1 PHE X 25 103.551 98.282 -14.894 1.00 0.51 \ ATOM 175 CE2 PHE X 25 102.529 99.264 -12.938 1.00 0.51 \ ATOM 176 CZ PHE X 25 102.418 98.722 -14.221 1.00 0.51 \ ATOM 177 N TYR X 26 107.416 102.113 -11.534 1.00 -0.23 \ ATOM 178 CA TYR X 26 107.832 102.917 -10.423 1.00 -0.23 \ ATOM 179 C TYR X 26 106.616 103.064 -9.547 1.00 -0.23 \ ATOM 180 O TYR X 26 105.687 103.777 -9.910 1.00 -0.23 \ ATOM 181 CB TYR X 26 108.355 104.300 -10.879 1.00 -0.23 \ ATOM 182 CG TYR X 26 108.773 105.115 -9.709 1.00 -0.23 \ ATOM 183 CD1 TYR X 26 109.851 104.713 -8.934 1.00 -0.23 \ ATOM 184 CD2 TYR X 26 108.062 106.231 -9.311 1.00 -0.23 \ ATOM 185 CE1 TYR X 26 110.249 105.435 -7.847 1.00 -0.23 \ ATOM 186 CE2 TYR X 26 108.462 106.959 -8.218 1.00 -0.23 \ ATOM 187 CZ TYR X 26 109.540 106.525 -7.475 1.00 -0.23 \ ATOM 188 OH TYR X 26 109.940 107.197 -6.345 1.00 -0.23 \ ATOM 189 N THR X 27 106.599 102.325 -8.440 1.00 -0.98 \ ATOM 190 CA THR X 27 105.672 102.589 -7.315 1.00 -0.98 \ ATOM 191 C THR X 27 106.492 103.107 -6.118 1.00 -0.98 \ ATOM 192 O THR X 27 107.398 102.405 -5.663 1.00 -0.98 \ ATOM 193 CB THR X 27 104.907 101.323 -6.858 1.00 -0.98 \ ATOM 194 OG1 THR X 27 104.590 100.479 -7.982 1.00 -0.98 \ ATOM 195 CG2 THR X 27 103.629 101.732 -6.117 1.00 -0.98 \ ATOM 196 N PRO X 28 106.194 104.323 -5.611 1.00 -0.78 \ ATOM 197 CA PRO X 28 107.000 104.919 -4.541 1.00 -0.78 \ ATOM 198 C PRO X 28 106.514 104.612 -3.116 1.00 -0.78 \ ATOM 199 O PRO X 28 105.558 103.852 -2.922 1.00 -0.78 \ ATOM 200 CB PRO X 28 106.858 106.417 -4.821 1.00 -0.78 \ ATOM 201 CG PRO X 28 105.462 106.539 -5.308 1.00 -0.78 \ ATOM 202 CD PRO X 28 105.153 105.265 -6.058 1.00 -0.78 \ ATOM 203 N LYS X 29 107.212 105.204 -2.144 1.00 -0.90 \ ATOM 204 CA LYS X 29 106.801 105.234 -0.736 1.00 -0.90 \ ATOM 205 C LYS X 29 107.405 106.482 -0.074 1.00 -0.90 \ ATOM 206 O LYS X 29 108.431 106.400 0.609 1.00 -0.90 \ ATOM 207 N THR X 30 106.764 107.629 -0.296 1.00 -1.45 \ ATOM 208 CA THR X 30 107.297 108.926 0.124 1.00 -1.45 \ ATOM 209 C THR X 30 107.139 109.182 1.616 1.00 -1.45 \ ATOM 210 O THR X 30 107.578 110.214 2.119 1.00 -1.45 \ """, "e5mamX1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mamX1_csv", state=0, origin=1) cmd.zoom("e5mamX1_csv", animate=-1)