cmd.read_pdbstr("""\ ATOM 1 N GLY Y 1 117.781 135.993 -28.074 1.00 0.33 \ ATOM 2 CA GLY Y 1 117.340 134.664 -27.601 1.00 0.33 \ ATOM 3 C GLY Y 1 118.520 133.859 -27.090 1.00 0.33 \ ATOM 4 O GLY Y 1 119.556 133.700 -27.776 1.00 0.33 \ ATOM 5 N ILE Y 2 118.369 133.368 -25.869 1.00 0.44 \ ATOM 6 CA ILE Y 2 119.303 132.379 -25.329 1.00 0.44 \ ATOM 7 C ILE Y 2 119.303 131.126 -26.188 1.00 0.44 \ ATOM 8 O ILE Y 2 120.347 130.561 -26.418 1.00 0.44 \ ATOM 9 CB ILE Y 2 119.025 132.047 -23.858 1.00 0.44 \ ATOM 10 CG1 ILE Y 2 120.193 131.267 -23.269 1.00 0.44 \ ATOM 11 CG2 ILE Y 2 117.708 131.312 -23.707 1.00 0.44 \ ATOM 12 CD1 ILE Y 2 119.967 130.851 -21.837 1.00 0.44 \ ATOM 13 N VAL Y 3 118.153 130.730 -26.702 1.00 1.08 \ ATOM 14 CA VAL Y 3 118.101 129.599 -27.641 1.00 1.08 \ ATOM 15 C VAL Y 3 118.876 129.949 -28.930 1.00 1.08 \ ATOM 16 O VAL Y 3 119.676 129.153 -29.424 1.00 1.08 \ ATOM 17 CB VAL Y 3 116.658 129.176 -27.937 1.00 1.08 \ ATOM 18 CG1 VAL Y 3 116.603 128.172 -29.086 1.00 1.08 \ ATOM 19 CG2 VAL Y 3 116.036 128.573 -26.685 1.00 1.08 \ ATOM 20 N GLU Y 4 118.654 131.158 -29.433 1.00 0.21 \ ATOM 21 CA GLU Y 4 119.418 131.687 -30.547 1.00 0.21 \ ATOM 22 C GLU Y 4 120.907 131.487 -30.335 1.00 0.21 \ ATOM 23 O GLU Y 4 121.537 130.767 -31.100 1.00 0.21 \ ATOM 24 N GLN Y 5 121.455 132.086 -29.275 1.00 0.00 \ ATOM 25 CA GLN Y 5 122.927 132.083 -29.049 1.00 0.00 \ ATOM 26 C GLN Y 5 123.591 130.739 -28.613 1.00 0.00 \ ATOM 27 O GLN Y 5 124.753 130.486 -28.939 1.00 0.00 \ ATOM 28 CB GLN Y 5 123.314 133.192 -28.048 1.00 0.00 \ ATOM 29 N CYS Y 6 122.851 129.902 -27.894 1.00 1.70 \ ATOM 30 CA CYS Y 6 123.392 128.703 -27.209 1.00 1.70 \ ATOM 31 C CYS Y 6 122.879 127.361 -27.696 1.00 1.70 \ ATOM 32 O CYS Y 6 123.529 126.337 -27.460 1.00 1.70 \ ATOM 33 CB CYS Y 6 123.067 128.806 -25.742 1.00 1.70 \ ATOM 34 SG CYS Y 6 123.941 130.185 -25.026 1.00 1.70 \ ATOM 35 N CYS Y 7 121.731 127.341 -28.361 1.00 1.70 \ ATOM 36 CA CYS Y 7 121.190 126.096 -28.888 1.00 1.70 \ ATOM 37 C CYS Y 7 121.422 125.930 -30.393 1.00 1.70 \ ATOM 38 O CYS Y 7 121.886 124.868 -30.810 1.00 1.70 \ ATOM 39 CB CYS Y 7 119.713 126.018 -28.574 1.00 1.70 \ ATOM 40 SG CYS Y 7 118.885 124.608 -29.308 1.00 1.70 \ ATOM 41 N THR Y 8 121.063 126.935 -31.209 1.00 -0.68 \ ATOM 42 CA THR Y 8 121.230 126.801 -32.671 1.00 -0.68 \ ATOM 43 C THR Y 8 122.665 127.121 -33.066 1.00 -0.68 \ ATOM 44 O THR Y 8 123.224 126.463 -33.938 1.00 -0.68 \ ATOM 45 CB THR Y 8 120.161 127.562 -33.527 1.00 -0.68 \ ATOM 46 OG1 THR Y 8 119.771 128.782 -32.903 1.00 -0.68 \ ATOM 47 CG2 THR Y 8 118.900 126.696 -33.702 1.00 -0.68 \ ATOM 48 N SER Y 9 123.265 128.112 -32.412 1.00 -0.80 \ ATOM 49 CA SER Y 9 124.714 128.304 -32.461 1.00 -0.80 \ ATOM 50 C SER Y 9 125.307 127.968 -31.113 1.00 -0.80 \ ATOM 51 O SER Y 9 124.577 127.798 -30.145 1.00 -0.80 \ ATOM 52 CB SER Y 9 125.061 129.729 -32.880 1.00 -0.80 \ ATOM 53 OG SER Y 9 125.117 129.782 -34.293 1.00 -0.80 \ ATOM 54 N ILE Y 10 126.627 127.844 -31.064 1.00 -0.79 \ ATOM 55 CA ILE Y 10 127.342 127.505 -29.823 1.00 -0.79 \ ATOM 56 C ILE Y 10 127.529 128.763 -28.971 1.00 -0.79 \ ATOM 57 O ILE Y 10 127.556 129.882 -29.502 1.00 -0.79 \ ATOM 58 CB ILE Y 10 128.695 126.834 -30.137 1.00 -0.79 \ ATOM 59 CG1 ILE Y 10 128.441 125.530 -30.898 1.00 -0.79 \ ATOM 60 CG2 ILE Y 10 129.478 126.529 -28.869 1.00 -0.79 \ ATOM 61 N CYS Y 11 127.612 128.574 -27.656 1.00 1.70 \ ATOM 62 CA CYS Y 11 128.012 129.638 -26.725 1.00 1.70 \ ATOM 63 C CYS Y 11 128.875 129.080 -25.589 1.00 1.70 \ ATOM 64 O CYS Y 11 128.531 128.049 -25.002 1.00 1.70 \ ATOM 65 CB CYS Y 11 126.778 130.349 -26.135 1.00 1.70 \ ATOM 66 SG CYS Y 11 125.831 129.414 -24.901 1.00 1.70 \ ATOM 67 N SER Y 12 129.979 129.767 -25.275 1.00 -0.16 \ ATOM 68 CA SER Y 12 130.709 129.521 -24.024 1.00 -0.16 \ ATOM 69 C SER Y 12 129.824 129.758 -22.789 1.00 -0.16 \ ATOM 70 O SER Y 12 128.924 130.606 -22.806 1.00 -0.16 \ ATOM 71 CB SER Y 12 131.931 130.425 -23.911 1.00 -0.16 \ ATOM 72 OG SER Y 12 131.552 131.761 -23.627 1.00 -0.16 \ ATOM 73 N LEU Y 13 130.104 129.024 -21.716 1.00 -0.38 \ ATOM 74 CA LEU Y 13 129.485 129.268 -20.411 1.00 -0.38 \ ATOM 75 C LEU Y 13 129.691 130.698 -19.882 1.00 -0.38 \ ATOM 76 O LEU Y 13 128.886 131.214 -19.085 1.00 -0.38 \ ATOM 77 CB LEU Y 13 130.067 128.308 -19.371 1.00 -0.38 \ ATOM 78 CG LEU Y 13 129.803 126.813 -19.517 1.00 -0.38 \ ATOM 79 CD1 LEU Y 13 130.585 126.082 -18.435 1.00 -0.38 \ ATOM 80 CD2 LEU Y 13 128.309 126.523 -19.414 1.00 -0.38 \ ATOM 81 N TYR Y 14 130.788 131.328 -20.291 1.00 -1.24 \ ATOM 82 CA TYR Y 14 131.038 132.681 -19.894 1.00 -1.24 \ ATOM 83 C TYR Y 14 129.949 133.502 -20.579 1.00 -1.24 \ ATOM 84 O TYR Y 14 129.302 134.312 -19.923 1.00 -1.24 \ ATOM 85 CB TYR Y 14 132.469 133.122 -20.257 1.00 -1.24 \ ATOM 86 CG TYR Y 14 133.544 132.227 -19.648 1.00 -1.24 \ ATOM 87 CD1 TYR Y 14 134.049 132.474 -18.374 1.00 -1.24 \ ATOM 88 CD2 TYR Y 14 134.041 131.121 -20.343 1.00 -1.24 \ ATOM 89 CE1 TYR Y 14 135.028 131.653 -17.815 1.00 -1.24 \ ATOM 90 CE2 TYR Y 14 135.021 130.298 -19.798 1.00 -1.24 \ ATOM 91 CZ TYR Y 14 135.518 130.564 -18.532 1.00 -1.24 \ ATOM 92 OH TYR Y 14 136.487 129.735 -17.972 1.00 -1.24 \ ATOM 93 N GLN Y 15 129.682 133.232 -21.862 1.00 -0.57 \ ATOM 94 CA GLN Y 15 128.562 133.894 -22.566 1.00 -0.57 \ ATOM 95 C GLN Y 15 127.177 133.619 -21.940 1.00 -0.57 \ ATOM 96 O GLN Y 15 126.321 134.491 -21.965 1.00 -0.57 \ ATOM 97 CB GLN Y 15 128.589 133.616 -24.082 1.00 -0.57 \ ATOM 98 CG GLN Y 15 129.807 134.269 -24.745 1.00 -0.57 \ ATOM 99 CD GLN Y 15 130.093 133.801 -26.171 1.00 -0.57 \ ATOM 100 OE1 GLN Y 15 129.752 132.672 -26.569 1.00 -0.57 \ ATOM 101 NE2 GLN Y 15 130.746 134.676 -26.952 1.00 -0.57 \ ATOM 102 N LEU Y 16 126.999 132.449 -21.325 1.00 0.77 \ ATOM 103 CA LEU Y 16 125.770 132.135 -20.580 1.00 0.77 \ ATOM 104 C LEU Y 16 125.602 132.998 -19.350 1.00 0.77 \ ATOM 105 O LEU Y 16 124.475 133.210 -18.891 1.00 0.77 \ ATOM 106 CB LEU Y 16 125.731 130.661 -20.134 1.00 0.77 \ ATOM 107 CG LEU Y 16 124.989 129.595 -20.925 1.00 0.77 \ ATOM 108 CD1 LEU Y 16 124.983 128.324 -20.097 1.00 0.77 \ ATOM 109 CD2 LEU Y 16 123.551 129.965 -21.256 1.00 0.77 \ ATOM 110 N GLU Y 17 126.719 133.448 -18.786 1.00 0.32 \ ATOM 111 CA GLU Y 17 126.704 134.307 -17.600 1.00 0.32 \ ATOM 112 C GLU Y 17 125.940 135.621 -17.813 1.00 0.32 \ ATOM 113 O GLU Y 17 125.419 136.170 -16.851 1.00 0.32 \ ATOM 114 CB GLU Y 17 128.124 134.600 -17.119 1.00 0.32 \ ATOM 115 CG GLU Y 17 128.197 135.013 -15.660 1.00 0.32 \ ATOM 116 CD GLU Y 17 129.551 134.704 -15.035 1.00 0.32 \ ATOM 117 OE1 GLU Y 17 129.582 134.004 -13.994 1.00 0.32 \ ATOM 118 OE2 GLU Y 17 130.584 135.135 -15.599 1.00 0.32 \ ATOM 119 N ASN Y 18 125.878 136.092 -19.072 1.00 -0.96 \ ATOM 120 CA ASN Y 18 125.043 137.232 -19.496 1.00 -0.96 \ ATOM 121 C ASN Y 18 123.594 137.089 -19.044 1.00 -0.96 \ ATOM 122 O ASN Y 18 122.958 138.091 -18.695 1.00 -0.96 \ ATOM 123 CB ASN Y 18 125.029 137.391 -21.036 1.00 -0.96 \ ATOM 124 CG ASN Y 18 126.381 137.820 -21.629 1.00 -0.96 \ ATOM 125 OD1 ASN Y 18 126.749 137.402 -22.755 1.00 -0.96 \ ATOM 126 ND2 ASN Y 18 127.124 138.647 -20.894 1.00 -0.96 \ ATOM 127 N TYR Y 19 123.075 135.855 -19.043 1.00 1.17 \ ATOM 128 CA TYR Y 19 121.699 135.599 -18.597 1.00 1.17 \ ATOM 129 C TYR Y 19 121.509 135.446 -17.102 1.00 1.17 \ ATOM 130 O TYR Y 19 120.427 135.143 -16.685 1.00 1.17 \ ATOM 131 CB TYR Y 19 121.107 134.388 -19.301 1.00 1.17 \ ATOM 132 CG TYR Y 19 121.072 134.572 -20.767 1.00 1.17 \ ATOM 133 CD1 TYR Y 19 119.996 135.176 -21.373 1.00 1.17 \ ATOM 134 CD2 TYR Y 19 122.144 134.175 -21.556 1.00 1.17 \ ATOM 135 CE1 TYR Y 19 119.966 135.370 -22.735 1.00 1.17 \ ATOM 136 CE2 TYR Y 19 122.131 134.372 -22.914 1.00 1.17 \ ATOM 137 CZ TYR Y 19 121.032 134.964 -23.503 1.00 1.17 \ ATOM 138 OH TYR Y 19 121.033 135.160 -24.862 1.00 1.17 \ ATOM 139 N CYS Y 20 122.515 135.697 -16.280 1.00 1.70 \ ATOM 140 CA CYS Y 20 122.310 135.635 -14.829 1.00 1.70 \ ATOM 141 C CYS Y 20 121.684 136.934 -14.360 1.00 1.70 \ ATOM 142 O CYS Y 20 121.440 137.829 -15.152 1.00 1.70 \ ATOM 143 CB CYS Y 20 123.639 135.413 -14.104 1.00 1.70 \ ATOM 144 SG CYS Y 20 124.624 133.989 -14.670 1.00 1.70 \ ATOM 145 N ASN Y 21 121.395 137.021 -13.068 1.00 0.17 \ ATOM 146 CA ASN Y 21 121.088 138.300 -12.421 1.00 0.17 \ ATOM 147 C ASN Y 21 122.348 138.810 -11.728 1.00 0.17 \ ATOM 148 O ASN Y 21 123.457 138.284 -11.876 1.00 0.17 \ ATOM 149 CB ASN Y 21 119.940 138.142 -11.420 1.00 0.17 \ ATOM 150 CG ASN Y 21 118.727 137.463 -12.030 1.00 0.17 \ ATOM 151 OD1 ASN Y 21 118.686 137.186 -13.229 1.00 0.17 \ ATOM 152 ND2 ASN Y 21 117.735 137.181 -11.203 1.00 0.17 \ ATOM 153 OXT ASN Y 21 122.301 139.781 -10.990 1.00 0.17 \ """, "e5mamY1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mamY1_csv", state=0, origin=1) cmd.zoom("e5mamY1_csv", animate=-1)