cmd.read_pdbstr("""\ ATOM 1 N MET A 1 84.542 4.344 -35.598 1.00 -1.00 \ ATOM 2 CA MET A 1 85.516 4.845 -34.630 1.00 -1.00 \ ATOM 3 C MET A 1 86.884 4.211 -34.833 1.00 -1.00 \ ATOM 4 O MET A 1 86.994 3.104 -35.364 1.00 -1.00 \ ATOM 5 CB MET A 1 85.048 4.586 -33.198 1.00 -1.00 \ ATOM 6 CG MET A 1 85.133 3.126 -32.785 1.00 -1.00 \ ATOM 7 SD MET A 1 84.745 2.856 -31.048 1.00 -1.00 \ ATOM 8 CE MET A 1 85.930 3.931 -30.262 1.00 -1.00 \ ATOM 9 N ARG A 2 87.919 4.916 -34.385 1.00 0.39 \ ATOM 10 CA ARG A 2 89.298 4.479 -34.570 1.00 0.39 \ ATOM 11 C ARG A 2 89.507 3.045 -34.083 1.00 0.39 \ ATOM 12 O ARG A 2 89.009 2.650 -33.031 1.00 0.39 \ ATOM 13 CB ARG A 2 90.261 5.433 -33.849 1.00 0.39 \ ATOM 14 CG ARG A 2 91.705 4.953 -33.816 1.00 0.39 \ ATOM 15 CD ARG A 2 92.662 6.008 -34.323 1.00 0.39 \ ATOM 16 NE ARG A 2 93.478 6.581 -33.254 1.00 0.39 \ ATOM 17 CZ ARG A 2 94.796 6.767 -33.337 1.00 0.39 \ ATOM 18 NH1 ARG A 2 95.448 6.416 -34.437 1.00 0.39 \ ATOM 19 NH2 ARG A 2 95.468 7.302 -32.326 1.00 0.39 \ ATOM 20 N ALA A 3 90.231 2.268 -34.876 1.00 0.39 \ ATOM 21 CA ALA A 3 90.490 0.879 -34.558 1.00 0.39 \ ATOM 22 C ALA A 3 91.120 0.743 -33.181 1.00 0.39 \ ATOM 23 O ALA A 3 90.720 -0.115 -32.393 1.00 0.39 \ ATOM 24 CB ALA A 3 91.385 0.258 -35.617 1.00 0.39 \ ATOM 25 N LYS A 4 92.089 1.604 -32.893 1.00 0.39 \ ATOM 26 CA LYS A 4 92.818 1.530 -31.635 1.00 0.39 \ ATOM 27 C LYS A 4 91.924 1.782 -30.404 1.00 0.39 \ ATOM 28 O LYS A 4 92.067 1.106 -29.390 1.00 0.39 \ ATOM 29 CB LYS A 4 93.999 2.502 -31.670 1.00 0.39 \ ATOM 30 CG LYS A 4 93.966 3.608 -30.641 1.00 0.39 \ ATOM 31 CD LYS A 4 95.275 3.659 -29.874 1.00 0.39 \ ATOM 32 CE LYS A 4 96.471 3.727 -30.816 1.00 0.39 \ ATOM 33 NZ LYS A 4 97.763 3.933 -30.091 1.00 0.39 \ ATOM 34 N TRP A 5 90.990 2.726 -30.494 1.00 0.39 \ ATOM 35 CA TRP A 5 90.031 2.935 -29.409 1.00 0.39 \ ATOM 36 C TRP A 5 88.904 1.899 -29.441 1.00 0.39 \ ATOM 37 O TRP A 5 88.226 1.669 -28.439 1.00 0.39 \ ATOM 38 CB TRP A 5 89.410 4.334 -29.454 1.00 0.39 \ ATOM 39 CG TRP A 5 90.347 5.499 -29.630 1.00 0.39 \ ATOM 40 CD1 TRP A 5 90.148 6.574 -30.444 1.00 0.39 \ ATOM 41 CD2 TRP A 5 91.608 5.721 -28.986 1.00 0.39 \ ATOM 42 NE1 TRP A 5 91.198 7.447 -30.347 1.00 0.39 \ ATOM 43 CE2 TRP A 5 92.109 6.945 -29.455 1.00 0.39 \ ATOM 44 CE3 TRP A 5 92.363 5.006 -28.062 1.00 0.39 \ ATOM 45 CZ2 TRP A 5 93.327 7.466 -29.032 1.00 0.39 \ ATOM 46 CZ3 TRP A 5 93.574 5.531 -27.644 1.00 0.39 \ ATOM 47 CH2 TRP A 5 94.043 6.741 -28.133 1.00 0.39 \ ATOM 48 N ARG A 6 88.681 1.295 -30.598 1.00 0.39 \ ATOM 49 CA ARG A 6 87.742 0.189 -30.688 1.00 0.39 \ ATOM 50 C ARG A 6 88.382 -1.063 -30.100 1.00 0.39 \ ATOM 51 O ARG A 6 87.696 -1.939 -29.565 1.00 0.39 \ ATOM 52 CB ARG A 6 87.331 -0.040 -32.131 1.00 0.39 \ ATOM 53 CG ARG A 6 86.718 -1.381 -32.384 1.00 0.39 \ ATOM 54 CD ARG A 6 85.225 -1.340 -32.216 1.00 0.39 \ ATOM 55 NE ARG A 6 84.610 -2.430 -32.972 1.00 0.39 \ ATOM 56 CZ ARG A 6 84.412 -3.662 -32.502 1.00 0.39 \ ATOM 57 NH1 ARG A 6 84.766 -3.973 -31.254 1.00 0.39 \ ATOM 58 NH2 ARG A 6 83.849 -4.581 -33.287 1.00 0.39 \ ATOM 59 N LYS A 7 89.710 -1.130 -30.208 1.00 0.39 \ ATOM 60 CA LYS A 7 90.504 -2.149 -29.519 1.00 0.39 \ ATOM 61 C LYS A 7 90.491 -1.878 -28.013 1.00 0.39 \ ATOM 62 O LYS A 7 90.472 -2.808 -27.205 1.00 0.39 \ ATOM 63 CB LYS A 7 91.945 -2.185 -30.046 1.00 0.39 \ ATOM 64 CG LYS A 7 92.767 -3.353 -29.521 1.00 0.39 \ ATOM 65 CD LYS A 7 94.084 -3.525 -30.278 1.00 0.39 \ ATOM 66 CE LYS A 7 94.900 -4.682 -29.699 1.00 0.39 \ ATOM 67 NZ LYS A 7 96.077 -5.055 -30.526 1.00 0.39 \ ATOM 68 N LYS A 8 90.496 -0.600 -27.639 1.00 0.39 \ ATOM 69 CA LYS A 8 90.386 -0.230 -26.232 1.00 0.39 \ ATOM 70 C LYS A 8 89.002 -0.573 -25.734 1.00 0.39 \ ATOM 71 O LYS A 8 88.841 -1.098 -24.639 1.00 0.39 \ ATOM 72 CB LYS A 8 90.668 1.256 -26.024 1.00 0.39 \ ATOM 73 CG LYS A 8 90.682 1.681 -24.578 1.00 0.39 \ ATOM 74 CD LYS A 8 91.039 3.150 -24.424 1.00 0.39 \ ATOM 75 CE LYS A 8 92.515 3.419 -24.672 1.00 0.39 \ ATOM 76 NZ LYS A 8 93.414 2.686 -23.742 1.00 0.39 \ ATOM 77 N ARG A 9 88.003 -0.280 -26.556 1.00 0.39 \ ATOM 78 CA ARG A 9 86.619 -0.486 -26.167 1.00 0.39 \ ATOM 79 C ARG A 9 86.342 -1.949 -25.862 1.00 0.39 \ ATOM 80 O ARG A 9 85.688 -2.281 -24.871 1.00 0.39 \ ATOM 81 CB ARG A 9 85.684 0.006 -27.257 1.00 0.39 \ ATOM 82 CG ARG A 9 84.712 1.022 -26.763 1.00 0.39 \ ATOM 83 CD ARG A 9 83.295 0.611 -27.092 1.00 0.39 \ ATOM 84 NE ARG A 9 82.769 1.331 -28.245 1.00 0.39 \ ATOM 85 CZ ARG A 9 82.368 2.597 -28.211 1.00 0.39 \ ATOM 86 NH1 ARG A 9 82.433 3.294 -27.087 1.00 0.39 \ ATOM 87 NH2 ARG A 9 81.900 3.172 -29.300 1.00 0.39 \ ATOM 88 N THR A 10 86.862 -2.830 -26.701 1.00 -2.46 \ ATOM 89 CA THR A 10 86.655 -4.244 -26.476 1.00 -2.46 \ ATOM 90 C THR A 10 87.575 -4.769 -25.379 1.00 -2.46 \ ATOM 91 O THR A 10 87.253 -5.758 -24.722 1.00 -2.46 \ ATOM 92 CB THR A 10 86.860 -5.060 -27.766 1.00 -2.46 \ ATOM 93 OG1 THR A 10 87.653 -4.303 -28.692 1.00 -2.46 \ ATOM 94 CG2 THR A 10 85.507 -5.364 -28.409 1.00 -2.46 \ ATOM 95 N ARG A 11 88.707 -4.104 -25.162 1.00 0.39 \ ATOM 96 CA ARG A 11 89.647 -4.539 -24.122 1.00 0.39 \ ATOM 97 C ARG A 11 89.047 -4.321 -22.735 1.00 0.39 \ ATOM 98 O ARG A 11 89.213 -5.144 -21.827 1.00 0.39 \ ATOM 99 CB ARG A 11 90.978 -3.790 -24.243 1.00 0.39 \ ATOM 100 CG ARG A 11 92.205 -4.673 -24.368 1.00 0.39 \ ATOM 101 CD ARG A 11 92.199 -5.424 -25.685 1.00 0.39 \ ATOM 102 NE ARG A 11 93.476 -6.074 -25.976 1.00 0.39 \ ATOM 103 CZ ARG A 11 94.584 -5.421 -26.324 1.00 0.39 \ ATOM 104 NH1 ARG A 11 94.575 -4.100 -26.407 1.00 0.39 \ ATOM 105 NH2 ARG A 11 95.705 -6.085 -26.585 1.00 0.39 \ ATOM 106 N ARG A 12 88.353 -3.193 -22.593 1.00 0.39 \ ATOM 107 CA ARG A 12 87.690 -2.822 -21.350 1.00 0.39 \ ATOM 108 C ARG A 12 86.585 -3.798 -21.053 1.00 0.39 \ ATOM 109 O ARG A 12 86.514 -4.381 -19.976 1.00 0.39 \ ATOM 110 CB ARG A 12 87.106 -1.420 -21.447 1.00 0.39 \ ATOM 111 CG ARG A 12 88.120 -0.315 -21.497 1.00 0.39 \ ATOM 112 CD ARG A 12 87.402 0.993 -21.637 1.00 0.39 \ ATOM 113 NE ARG A 12 88.310 2.119 -21.745 1.00 0.39 \ ATOM 114 CZ ARG A 12 87.956 3.271 -22.291 1.00 0.39 \ ATOM 115 NH1 ARG A 12 86.728 3.411 -22.764 1.00 0.39 \ ATOM 116 NH2 ARG A 12 88.814 4.273 -22.372 1.00 0.39 \ ATOM 117 N LEU A 13 85.717 -3.952 -22.040 1.00 0.39 \ ATOM 118 CA LEU A 13 84.558 -4.800 -21.917 1.00 0.39 \ ATOM 119 C LEU A 13 84.965 -6.221 -21.555 1.00 0.39 \ ATOM 120 O LEU A 13 84.285 -6.872 -20.771 1.00 0.39 \ ATOM 121 CB LEU A 13 83.761 -4.750 -23.216 1.00 0.39 \ ATOM 122 CG LEU A 13 82.539 -5.629 -23.456 1.00 0.39 \ ATOM 123 CD1 LEU A 13 83.044 -6.903 -24.017 1.00 0.39 \ ATOM 124 CD2 LEU A 13 81.699 -5.868 -22.205 1.00 0.39 \ ATOM 125 N LYS A 14 86.072 -6.702 -22.112 1.00 0.39 \ ATOM 126 CA LYS A 14 86.561 -8.033 -21.762 1.00 0.39 \ ATOM 127 C LYS A 14 86.922 -8.093 -20.277 1.00 0.39 \ ATOM 128 O LYS A 14 86.797 -9.139 -19.622 1.00 0.39 \ ATOM 129 CB LYS A 14 87.779 -8.411 -22.607 1.00 0.39 \ ATOM 130 CG LYS A 14 87.474 -9.204 -23.871 1.00 0.39 \ ATOM 131 CD LYS A 14 88.763 -9.718 -24.539 1.00 0.39 \ ATOM 132 CE LYS A 14 89.775 -8.579 -24.757 1.00 0.39 \ ATOM 133 NZ LYS A 14 90.924 -8.911 -25.671 1.00 0.39 \ ATOM 134 N ARG A 15 87.375 -6.957 -19.756 1.00 0.39 \ ATOM 135 CA ARG A 15 87.811 -6.855 -18.369 1.00 0.39 \ ATOM 136 C ARG A 15 86.607 -6.829 -17.411 1.00 0.39 \ ATOM 137 O ARG A 15 86.656 -7.401 -16.315 1.00 0.39 \ ATOM 138 CB ARG A 15 88.697 -5.612 -18.211 1.00 0.39 \ ATOM 139 CG ARG A 15 89.030 -5.214 -16.801 1.00 0.39 \ ATOM 140 CD ARG A 15 90.267 -4.340 -16.785 1.00 0.39 \ ATOM 141 NE ARG A 15 90.283 -3.393 -17.900 1.00 0.39 \ ATOM 142 CZ ARG A 15 91.310 -2.596 -18.199 1.00 0.39 \ ATOM 143 NH1 ARG A 15 92.420 -2.630 -17.464 1.00 0.39 \ ATOM 144 NH2 ARG A 15 91.230 -1.762 -19.235 1.00 0.39 \ ATOM 145 N LYS A 16 85.522 -6.180 -17.834 1.00 0.39 \ ATOM 146 CA LYS A 16 84.342 -6.066 -16.984 1.00 0.39 \ ATOM 147 C LYS A 16 83.525 -7.348 -17.009 1.00 0.39 \ ATOM 148 O LYS A 16 82.873 -7.693 -16.022 1.00 0.39 \ ATOM 149 CB LYS A 16 83.461 -4.876 -17.391 1.00 0.39 \ ATOM 150 CG LYS A 16 82.511 -4.446 -16.272 1.00 0.39 \ ATOM 151 CD LYS A 16 82.072 -2.995 -16.385 1.00 0.39 \ ATOM 152 CE LYS A 16 81.323 -2.555 -15.125 1.00 0.39 \ ATOM 153 NZ LYS A 16 80.087 -3.367 -14.829 1.00 0.39 \ ATOM 154 N ARG A 17 83.544 -8.055 -18.133 1.00 0.39 \ ATOM 155 CA ARG A 17 82.838 -9.324 -18.185 1.00 0.39 \ ATOM 156 C ARG A 17 83.622 -10.285 -17.333 1.00 0.39 \ ATOM 157 O ARG A 17 83.056 -11.198 -16.736 1.00 0.39 \ ATOM 158 CB ARG A 17 82.670 -9.840 -19.618 1.00 0.39 \ ATOM 159 CG ARG A 17 81.642 -9.030 -20.435 1.00 0.39 \ ATOM 160 CD ARG A 17 80.902 -9.842 -21.513 1.00 0.39 \ ATOM 161 NE ARG A 17 81.676 -10.011 -22.743 1.00 0.39 \ ATOM 162 CZ ARG A 17 81.348 -9.500 -23.928 1.00 0.39 \ ATOM 163 NH1 ARG A 17 80.265 -8.745 -24.069 1.00 0.39 \ ATOM 164 NH2 ARG A 17 82.129 -9.727 -24.977 1.00 0.39 \ ATOM 165 N ARG A 18 84.928 -10.045 -17.258 1.00 0.39 \ ATOM 166 CA ARG A 18 85.794 -10.838 -16.400 1.00 0.39 \ ATOM 167 C ARG A 18 85.313 -10.714 -14.958 1.00 0.39 \ ATOM 168 O ARG A 18 85.003 -11.726 -14.319 1.00 0.39 \ ATOM 169 CB ARG A 18 87.254 -10.394 -16.531 1.00 0.39 \ ATOM 170 CG ARG A 18 88.288 -11.348 -15.920 1.00 0.39 \ ATOM 171 CD ARG A 18 89.692 -10.923 -16.347 1.00 0.39 \ ATOM 172 NE ARG A 18 89.749 -10.609 -17.780 1.00 0.39 \ ATOM 173 CZ ARG A 18 90.771 -10.011 -18.398 1.00 0.39 \ ATOM 174 NH1 ARG A 18 91.855 -9.643 -17.718 1.00 0.39 \ ATOM 175 NH2 ARG A 18 90.706 -9.777 -19.707 1.00 0.39 \ ATOM 176 N LYS A 19 85.240 -9.476 -14.464 1.00 0.39 \ ATOM 177 CA LYS A 19 84.735 -9.212 -13.112 1.00 0.39 \ ATOM 178 C LYS A 19 83.423 -9.950 -12.888 1.00 0.39 \ ATOM 179 O LYS A 19 83.334 -10.888 -12.089 1.00 0.39 \ ATOM 180 CB LYS A 19 84.524 -7.705 -12.875 1.00 0.39 \ ATOM 181 CG LYS A 19 85.651 -6.980 -12.138 1.00 0.39 \ ATOM 182 CD LYS A 19 86.864 -6.742 -13.046 1.00 0.39 \ ATOM 183 CE LYS A 19 88.114 -6.341 -12.245 1.00 0.39 \ ATOM 184 NZ LYS A 19 88.039 -5.013 -11.554 1.00 0.39 \ ATOM 185 N VAL A 20 82.419 -9.523 -13.643 1.00 -2.46 \ ATOM 186 CA VAL A 20 81.058 -9.997 -13.487 1.00 -2.46 \ ATOM 187 C VAL A 20 80.991 -11.506 -13.491 1.00 -2.46 \ ATOM 188 O VAL A 20 80.191 -12.117 -12.781 1.00 -2.46 \ ATOM 189 CB VAL A 20 80.171 -9.440 -14.594 1.00 -2.46 \ ATOM 190 CG1 VAL A 20 78.799 -10.105 -14.576 1.00 -2.46 \ ATOM 191 CG2 VAL A 20 80.059 -7.936 -14.439 1.00 -2.46 \ ATOM 192 N ARG A 21 81.858 -12.120 -14.273 1.00 0.39 \ ATOM 193 CA ARG A 21 81.816 -13.556 -14.331 1.00 0.39 \ ATOM 194 C ARG A 21 82.389 -14.139 -13.060 1.00 0.39 \ ATOM 195 O ARG A 21 81.788 -15.032 -12.478 1.00 0.39 \ ATOM 196 CB ARG A 21 82.557 -14.091 -15.554 1.00 0.39 \ ATOM 197 CG ARG A 21 81.718 -15.092 -16.344 1.00 0.39 \ ATOM 198 CD ARG A 21 82.518 -15.797 -17.387 1.00 0.39 \ ATOM 199 NE ARG A 21 82.418 -17.238 -17.229 1.00 0.39 \ ATOM 200 CZ ARG A 21 83.074 -18.115 -17.980 1.00 0.39 \ ATOM 201 NH1 ARG A 21 82.925 -19.414 -17.755 1.00 0.39 \ ATOM 202 NH2 ARG A 21 83.877 -17.696 -18.959 1.00 0.39 \ ATOM 203 N ALA A 22 83.534 -13.628 -12.617 1.00 -2.46 \ ATOM 204 CA ALA A 22 84.241 -14.245 -11.492 1.00 -2.46 \ ATOM 205 C ALA A 22 83.426 -14.176 -10.212 1.00 -2.46 \ ATOM 206 O ALA A 22 83.604 -15.003 -9.317 1.00 -2.46 \ ATOM 207 CB ALA A 22 85.600 -13.597 -11.281 1.00 -2.46 \ ATOM 208 N ARG A 23 82.531 -13.190 -10.136 1.00 0.39 \ ATOM 209 CA ARG A 23 81.600 -13.065 -9.013 1.00 0.39 \ ATOM 210 C ARG A 23 80.789 -14.352 -8.851 1.00 0.39 \ ATOM 211 O ARG A 23 80.324 -14.682 -7.759 1.00 0.39 \ ATOM 212 CB ARG A 23 80.653 -11.873 -9.218 1.00 0.39 \ ATOM 213 CG ARG A 23 81.335 -10.525 -9.432 1.00 0.39 \ ATOM 214 CD ARG A 23 80.308 -9.397 -9.655 1.00 0.39 \ ATOM 215 NE ARG A 23 79.481 -9.134 -8.474 1.00 0.39 \ ATOM 216 CZ ARG A 23 78.177 -9.394 -8.379 1.00 0.39 \ ATOM 217 NH1 ARG A 23 77.526 -9.125 -7.259 1.00 0.39 \ ATOM 218 NH2 ARG A 23 77.519 -9.923 -9.398 1.00 0.39 \ ATOM 219 N SER A 24 80.639 -15.073 -9.957 1.00 -1.00 \ ATOM 220 CA SER A 24 79.806 -16.262 -10.022 1.00 -1.00 \ ATOM 221 C SER A 24 80.565 -17.548 -9.687 1.00 -1.00 \ ATOM 222 O SER A 24 79.950 -18.602 -9.527 1.00 -1.00 \ ATOM 223 CB SER A 24 79.187 -16.368 -11.423 1.00 -1.00 \ ATOM 224 OG SER A 24 77.985 -17.118 -11.415 1.00 -1.00 \ ATOM 225 N LYS A 25 81.891 -17.464 -9.581 1.00 -1.00 \ ATOM 226 CA LYS A 25 82.702 -18.633 -9.232 1.00 -1.00 \ ATOM 227 C LYS A 25 82.286 -19.245 -7.891 1.00 -1.00 \ ATOM 228 O LYS A 25 81.833 -18.543 -6.979 1.00 -1.00 \ ATOM 229 CB LYS A 25 84.189 -18.270 -9.185 1.00 -1.00 \ ATOM 230 CG LYS A 25 84.820 -17.981 -10.534 1.00 -1.00 \ ATOM 231 CD LYS A 25 86.356 -17.973 -10.445 1.00 -1.00 \ ATOM 232 CE LYS A 25 86.857 -16.972 -9.404 1.00 -1.00 \ ATOM 233 NZ LYS A 25 88.314 -16.704 -9.547 1.00 -1.00 \ """, "e5meiAO1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5meiAO1_csv", state=0, origin=1) cmd.zoom("e5meiAO1_csv", animate=-1)