cmd.read_pdbstr("""\ ATOM 1 N MET D 1 197.776 -0.733 260.321 1.00 -1.00 \ ATOM 2 CA MET D 1 196.607 0.001 259.857 1.00 -1.00 \ ATOM 3 C MET D 1 195.318 -0.503 260.502 1.00 -1.00 \ ATOM 4 O MET D 1 195.314 -1.510 261.231 1.00 -1.00 \ ATOM 5 CB MET D 1 196.500 -0.080 258.333 1.00 -1.00 \ ATOM 6 CG MET D 1 195.897 -1.376 257.815 1.00 -1.00 \ ATOM 7 SD MET D 1 196.188 -1.695 256.053 1.00 -1.00 \ ATOM 8 CE MET D 1 195.174 -0.458 255.253 1.00 -1.00 \ ATOM 9 N ARG D 2 194.233 0.225 260.234 1.00 0.39 \ ATOM 10 CA ARG D 2 192.926 -0.058 260.822 1.00 0.39 \ ATOM 11 C ARG D 2 192.480 -1.429 260.381 1.00 0.39 \ ATOM 12 O ARG D 2 192.716 -1.832 259.246 1.00 0.39 \ ATOM 13 CB ARG D 2 191.888 1.014 260.439 1.00 0.39 \ ATOM 14 CG ARG D 2 190.426 0.535 260.373 1.00 0.39 \ ATOM 15 CD ARG D 2 189.494 1.407 261.216 1.00 0.39 \ ATOM 16 NE ARG D 2 188.569 2.240 260.452 1.00 0.39 \ ATOM 17 CZ ARG D 2 187.250 2.194 260.591 1.00 0.39 \ ATOM 18 NH1 ARG D 2 186.708 1.357 261.446 1.00 0.39 \ ATOM 19 NH2 ARG D 2 186.465 2.976 259.882 1.00 0.39 \ ATOM 20 N ALA D 3 191.847 -2.137 261.305 1.00 0.39 \ ATOM 21 CA ALA D 3 191.502 -3.537 261.147 1.00 0.39 \ ATOM 22 C ALA D 3 190.698 -3.835 259.879 1.00 0.39 \ ATOM 23 O ALA D 3 190.966 -4.796 259.163 1.00 0.39 \ ATOM 24 CB ALA D 3 190.742 -3.985 262.380 1.00 0.39 \ ATOM 25 N LYS D 4 189.718 -2.995 259.603 1.00 0.39 \ ATOM 26 CA LYS D 4 188.847 -3.242 258.473 1.00 0.39 \ ATOM 27 C LYS D 4 189.431 -2.810 257.117 1.00 0.39 \ ATOM 28 O LYS D 4 189.058 -3.367 256.102 1.00 0.39 \ ATOM 29 CB LYS D 4 187.490 -2.571 258.722 1.00 0.39 \ ATOM 30 CG LYS D 4 187.056 -1.558 257.680 1.00 0.39 \ ATOM 31 CD LYS D 4 185.542 -1.397 257.640 1.00 0.39 \ ATOM 32 CE LYS D 4 184.987 -0.800 258.929 1.00 0.39 \ ATOM 33 NZ LYS D 4 183.618 -0.241 258.725 1.00 0.39 \ ATOM 34 N TRP D 5 190.335 -1.837 257.076 1.00 0.39 \ ATOM 35 CA TRP D 5 190.958 -1.496 255.801 1.00 0.39 \ ATOM 36 C TRP D 5 191.960 -2.561 255.396 1.00 0.39 \ ATOM 37 O TRP D 5 192.131 -2.849 254.216 1.00 0.39 \ ATOM 38 CB TRP D 5 191.657 -0.150 255.856 1.00 0.39 \ ATOM 39 CG TRP D 5 190.866 0.983 256.393 1.00 0.39 \ ATOM 40 CD1 TRP D 5 191.351 2.012 257.148 1.00 0.39 \ ATOM 41 CD2 TRP D 5 189.460 1.241 256.223 1.00 0.39 \ ATOM 42 NE1 TRP D 5 190.344 2.889 257.467 1.00 0.39 \ ATOM 43 CE2 TRP D 5 189.173 2.446 256.906 1.00 0.39 \ ATOM 44 CE3 TRP D 5 188.414 0.582 255.557 1.00 0.39 \ ATOM 45 CZ2 TRP D 5 187.889 3.002 256.947 1.00 0.39 \ ATOM 46 CZ3 TRP D 5 187.127 1.140 255.607 1.00 0.39 \ ATOM 47 CH2 TRP D 5 186.884 2.333 256.295 1.00 0.39 \ ATOM 48 N ARG D 6 192.635 -3.128 256.386 1.00 0.39 \ ATOM 49 CA ARG D 6 193.483 -4.292 256.169 1.00 0.39 \ ATOM 50 C ARG D 6 192.650 -5.456 255.662 1.00 0.39 \ ATOM 51 O ARG D 6 193.125 -6.269 254.868 1.00 0.39 \ ATOM 52 CB ARG D 6 194.210 -4.692 257.451 1.00 0.39 \ ATOM 53 CG ARG D 6 194.780 -6.113 257.451 1.00 0.39 \ ATOM 54 CD ARG D 6 195.231 -6.508 258.855 1.00 0.39 \ ATOM 55 NE ARG D 6 195.573 -7.926 259.011 1.00 0.39 \ ATOM 56 CZ ARG D 6 196.777 -8.445 258.766 1.00 0.39 \ ATOM 57 NH1 ARG D 6 197.766 -7.676 258.322 1.00 0.39 \ ATOM 58 NH2 ARG D 6 196.995 -9.739 258.955 1.00 0.39 \ ATOM 59 N LYS D 7 191.411 -5.547 256.136 1.00 0.39 \ ATOM 60 CA LYS D 7 190.475 -6.520 255.597 1.00 0.39 \ ATOM 61 C LYS D 7 190.318 -6.292 254.093 1.00 0.39 \ ATOM 62 O LYS D 7 190.622 -7.174 253.288 1.00 0.39 \ ATOM 63 CB LYS D 7 189.131 -6.420 256.304 1.00 0.39 \ ATOM 64 CG LYS D 7 188.149 -7.510 255.932 1.00 0.39 \ ATOM 65 CD LYS D 7 187.001 -7.587 256.949 1.00 0.39 \ ATOM 66 CE LYS D 7 185.911 -8.572 256.527 1.00 0.39 \ ATOM 67 NZ LYS D 7 184.783 -8.668 257.517 1.00 0.39 \ ATOM 68 N LYS D 8 189.883 -5.089 253.721 1.00 0.39 \ ATOM 69 CA LYS D 8 189.725 -4.712 252.321 1.00 0.39 \ ATOM 70 C LYS D 8 190.992 -5.024 251.558 1.00 0.39 \ ATOM 71 O LYS D 8 190.943 -5.537 250.449 1.00 0.39 \ ATOM 72 CB LYS D 8 189.388 -3.226 252.191 1.00 0.39 \ ATOM 73 CG LYS D 8 188.589 -2.876 250.949 1.00 0.39 \ ATOM 74 CD LYS D 8 188.497 -1.366 250.729 1.00 0.39 \ ATOM 75 CE LYS D 8 187.467 -0.693 251.638 1.00 0.39 \ ATOM 76 NZ LYS D 8 186.075 -0.802 251.107 1.00 0.39 \ ATOM 77 N ARG D 9 192.129 -4.727 252.173 1.00 0.39 \ ATOM 78 CA ARG D 9 193.429 -4.974 251.552 1.00 0.39 \ ATOM 79 C ARG D 9 193.610 -6.415 251.118 1.00 0.39 \ ATOM 80 O ARG D 9 194.116 -6.685 250.024 1.00 0.39 \ ATOM 81 CB ARG D 9 194.556 -4.613 252.515 1.00 0.39 \ ATOM 82 CG ARG D 9 195.280 -3.335 252.192 1.00 0.39 \ ATOM 83 CD ARG D 9 196.702 -3.638 251.788 1.00 0.39 \ ATOM 84 NE ARG D 9 197.644 -3.485 252.891 1.00 0.39 \ ATOM 85 CZ ARG D 9 198.251 -2.342 253.199 1.00 0.39 \ ATOM 86 NH1 ARG D 9 198.010 -1.239 252.505 1.00 0.39 \ ATOM 87 NH2 ARG D 9 199.102 -2.300 254.206 1.00 0.39 \ ATOM 88 N THR D 10 193.221 -7.336 251.997 1.00 -2.46 \ ATOM 89 CA THR D 10 193.393 -8.758 251.729 1.00 -2.46 \ ATOM 90 C THR D 10 192.226 -9.255 250.880 1.00 -2.46 \ ATOM 91 O THR D 10 192.318 -10.300 250.241 1.00 -2.46 \ ATOM 92 CB THR D 10 193.520 -9.597 253.039 1.00 -2.46 \ ATOM 93 OG1 THR D 10 192.350 -9.427 253.835 1.00 -2.46 \ ATOM 94 CG2 THR D 10 194.744 -9.176 253.869 1.00 -2.46 \ ATOM 95 N ARG D 11 191.139 -8.490 250.854 1.00 0.39 \ ATOM 96 CA ARG D 11 190.086 -8.728 249.871 1.00 0.39 \ ATOM 97 C ARG D 11 190.614 -8.353 248.484 1.00 0.39 \ ATOM 98 O ARG D 11 190.532 -9.138 247.532 1.00 0.39 \ ATOM 99 CB ARG D 11 188.823 -7.921 250.191 1.00 0.39 \ ATOM 100 CG ARG D 11 187.609 -8.743 250.630 1.00 0.39 \ ATOM 101 CD ARG D 11 187.683 -9.155 252.118 1.00 0.39 \ ATOM 102 NE ARG D 11 186.510 -9.921 252.552 1.00 0.39 \ ATOM 103 CZ ARG D 11 185.416 -9.387 253.089 1.00 0.39 \ ATOM 104 NH1 ARG D 11 185.329 -8.074 253.278 1.00 0.39 \ ATOM 105 NH2 ARG D 11 184.404 -10.169 253.437 1.00 0.39 \ ATOM 106 N ARG D 12 191.165 -7.147 248.391 1.00 0.39 \ ATOM 107 CA ARG D 12 191.769 -6.648 247.163 1.00 0.39 \ ATOM 108 C ARG D 12 192.880 -7.526 246.626 1.00 0.39 \ ATOM 109 O ARG D 12 193.121 -7.562 245.418 1.00 0.39 \ ATOM 110 CB ARG D 12 192.332 -5.260 247.391 1.00 0.39 \ ATOM 111 CG ARG D 12 191.300 -4.197 247.499 1.00 0.39 \ ATOM 112 CD ARG D 12 191.994 -2.875 247.475 1.00 0.39 \ ATOM 113 NE ARG D 12 191.091 -1.790 247.808 1.00 0.39 \ ATOM 114 CZ ARG D 12 191.480 -0.669 248.400 1.00 0.39 \ ATOM 115 NH1 ARG D 12 192.760 -0.503 248.721 1.00 0.39 \ ATOM 116 NH2 ARG D 12 190.591 0.277 248.674 1.00 0.39 \ ATOM 117 N LEU D 13 193.577 -8.205 247.529 1.00 0.39 \ ATOM 118 CA LEU D 13 194.688 -9.042 247.125 1.00 0.39 \ ATOM 119 C LEU D 13 194.178 -10.337 246.507 1.00 0.39 \ ATOM 120 O LEU D 13 194.647 -10.745 245.441 1.00 0.39 \ ATOM 121 CB LEU D 13 195.611 -9.338 248.311 1.00 0.39 \ ATOM 122 CG LEU D 13 197.077 -9.606 247.939 1.00 0.39 \ ATOM 123 CD1 LEU D 13 197.984 -9.425 249.143 1.00 0.39 \ ATOM 124 CD2 LEU D 13 197.296 -10.983 247.316 1.00 0.39 \ ATOM 125 N LYS D 14 193.217 -10.977 247.162 1.00 0.39 \ ATOM 126 CA LYS D 14 192.783 -12.290 246.717 1.00 0.39 \ ATOM 127 C LYS D 14 192.225 -12.292 245.289 1.00 0.39 \ ATOM 128 O LYS D 14 192.470 -13.219 244.523 1.00 0.39 \ ATOM 129 CB LYS D 14 191.754 -12.849 247.685 1.00 0.39 \ ATOM 130 CG LYS D 14 192.350 -13.255 249.003 1.00 0.39 \ ATOM 131 CD LYS D 14 191.554 -14.380 249.651 1.00 0.39 \ ATOM 132 CE LYS D 14 190.128 -13.963 250.009 1.00 0.39 \ ATOM 133 NZ LYS D 14 189.414 -14.980 250.840 1.00 0.39 \ ATOM 134 N ARG D 15 191.483 -11.254 244.927 1.00 0.39 \ ATOM 135 CA ARG D 15 190.958 -11.158 243.569 1.00 0.39 \ ATOM 136 C ARG D 15 192.075 -10.951 242.572 1.00 0.39 \ ATOM 137 O ARG D 15 192.049 -11.515 241.477 1.00 0.39 \ ATOM 138 CB ARG D 15 189.950 -10.026 243.453 1.00 0.39 \ ATOM 139 CG ARG D 15 188.527 -10.479 243.632 1.00 0.39 \ ATOM 140 CD ARG D 15 187.784 -9.484 244.454 1.00 0.39 \ ATOM 141 NE ARG D 15 188.199 -8.136 244.098 1.00 0.39 \ ATOM 142 CZ ARG D 15 187.605 -7.031 244.531 1.00 0.39 \ ATOM 143 NH1 ARG D 15 186.558 -7.116 245.348 1.00 0.39 \ ATOM 144 NH2 ARG D 15 188.059 -5.841 244.145 1.00 0.39 \ ATOM 145 N LYS D 16 193.047 -10.128 242.964 1.00 0.39 \ ATOM 146 CA LYS D 16 194.214 -9.835 242.145 1.00 0.39 \ ATOM 147 C LYS D 16 195.114 -11.056 242.094 1.00 0.39 \ ATOM 148 O LYS D 16 195.874 -11.237 241.145 1.00 0.39 \ ATOM 149 CB LYS D 16 194.969 -8.632 242.699 1.00 0.39 \ ATOM 150 CG LYS D 16 196.126 -8.162 241.847 1.00 0.39 \ ATOM 151 CD LYS D 16 197.386 -7.982 242.698 1.00 0.39 \ ATOM 152 CE LYS D 16 198.101 -6.678 242.371 1.00 0.39 \ ATOM 153 NZ LYS D 16 198.440 -6.554 240.920 1.00 0.39 \ ATOM 154 N ARG D 17 195.025 -11.889 243.125 1.00 0.39 \ ATOM 155 CA ARG D 17 195.769 -13.141 243.163 1.00 0.39 \ ATOM 156 C ARG D 17 195.020 -14.210 242.397 1.00 0.39 \ ATOM 157 O ARG D 17 195.593 -15.198 241.957 1.00 0.39 \ ATOM 158 CB ARG D 17 195.999 -13.594 244.607 1.00 0.39 \ ATOM 159 CG ARG D 17 197.060 -14.684 244.780 1.00 0.39 \ ATOM 160 CD ARG D 17 197.082 -15.256 246.224 1.00 0.39 \ ATOM 161 NE ARG D 17 197.517 -14.289 247.234 1.00 0.39 \ ATOM 162 CZ ARG D 17 198.772 -14.146 247.655 1.00 0.39 \ ATOM 163 NH1 ARG D 17 199.745 -14.916 247.166 1.00 0.39 \ ATOM 164 NH2 ARG D 17 199.051 -13.235 248.577 1.00 0.39 \ ATOM 165 N ARG D 18 193.721 -14.012 242.251 1.00 0.39 \ ATOM 166 CA ARG D 18 192.896 -15.008 241.598 1.00 0.39 \ ATOM 167 C ARG D 18 193.029 -14.871 240.100 1.00 0.39 \ ATOM 168 O ARG D 18 193.162 -15.866 239.400 1.00 0.39 \ ATOM 169 CB ARG D 18 191.435 -14.868 242.034 1.00 0.39 \ ATOM 170 CG ARG D 18 190.442 -15.746 241.263 1.00 0.39 \ ATOM 171 CD ARG D 18 189.027 -15.149 241.308 1.00 0.39 \ ATOM 172 NE ARG D 18 188.531 -14.976 242.677 1.00 0.39 \ ATOM 173 CZ ARG D 18 187.599 -14.091 243.034 1.00 0.39 \ ATOM 174 NH1 ARG D 18 187.072 -13.276 242.117 1.00 0.39 \ ATOM 175 NH2 ARG D 18 187.203 -14.012 244.309 1.00 0.39 \ ATOM 176 N LYS D 19 193.001 -13.630 239.625 1.00 0.39 \ ATOM 177 CA LYS D 19 193.145 -13.330 238.204 1.00 0.39 \ ATOM 178 C LYS D 19 194.446 -13.884 237.651 1.00 0.39 \ ATOM 179 O LYS D 19 194.484 -14.451 236.554 1.00 0.39 \ ATOM 180 CB LYS D 19 193.096 -11.820 237.953 1.00 0.39 \ ATOM 181 CG LYS D 19 191.697 -11.217 237.761 1.00 0.39 \ ATOM 182 CD LYS D 19 191.745 -9.671 237.786 1.00 0.39 \ ATOM 183 CE LYS D 19 190.630 -9.026 236.953 1.00 0.39 \ ATOM 184 NZ LYS D 19 190.848 -9.153 235.464 1.00 0.39 \ ATOM 185 N VAL D 20 195.511 -13.701 238.420 1.00 -2.46 \ ATOM 186 CA VAL D 20 196.821 -14.194 238.043 1.00 -2.46 \ ATOM 187 C VAL D 20 196.810 -15.691 237.789 1.00 -2.46 \ ATOM 188 O VAL D 20 197.358 -16.161 236.804 1.00 -2.46 \ ATOM 189 CB VAL D 20 197.836 -13.885 239.122 1.00 -2.46 \ ATOM 190 CG1 VAL D 20 199.159 -14.536 238.800 1.00 -2.46 \ ATOM 191 CG2 VAL D 20 197.982 -12.400 239.262 1.00 -2.46 \ ATOM 192 N ARG D 21 196.171 -16.437 238.679 1.00 0.39 \ ATOM 193 CA ARG D 21 196.155 -17.887 238.568 1.00 0.39 \ ATOM 194 C ARG D 21 195.413 -18.304 237.312 1.00 0.39 \ ATOM 195 O ARG D 21 195.922 -19.095 236.523 1.00 0.39 \ ATOM 196 CB ARG D 21 195.520 -18.531 239.813 1.00 0.39 \ ATOM 197 CG ARG D 21 195.678 -20.065 239.863 1.00 0.39 \ ATOM 198 CD ARG D 21 195.850 -20.593 241.273 1.00 0.39 \ ATOM 199 NE ARG D 21 195.836 -22.057 241.300 1.00 0.39 \ ATOM 200 CZ ARG D 21 194.943 -22.803 241.974 1.00 0.39 \ ATOM 201 NH1 ARG D 21 195.013 -24.136 241.939 1.00 0.39 \ ATOM 202 NH2 ARG D 21 193.982 -22.225 242.702 1.00 0.39 \ ATOM 203 N ALA D 22 194.221 -17.747 237.128 1.00 -2.46 \ ATOM 204 CA ALA D 22 193.359 -18.102 236.014 1.00 -2.46 \ ATOM 205 C ALA D 22 194.005 -17.803 234.669 1.00 -2.46 \ ATOM 206 O ALA D 22 193.656 -18.424 233.671 1.00 -2.46 \ ATOM 207 CB ALA D 22 192.042 -17.388 236.131 1.00 -2.46 \ ATOM 208 N ARG D 23 194.981 -16.896 234.642 1.00 0.39 \ ATOM 209 CA ARG D 23 195.754 -16.641 233.418 1.00 0.39 \ ATOM 210 C ARG D 23 196.433 -17.914 232.907 1.00 0.39 \ ATOM 211 O ARG D 23 196.998 -17.939 231.822 1.00 0.39 \ ATOM 212 CB ARG D 23 196.809 -15.567 233.650 1.00 0.39 \ ATOM 213 CG ARG D 23 196.251 -14.190 233.881 1.00 0.39 \ ATOM 214 CD ARG D 23 197.378 -13.178 234.017 1.00 0.39 \ ATOM 215 NE ARG D 23 197.870 -12.714 232.724 1.00 0.39 \ ATOM 216 CZ ARG D 23 198.832 -13.309 232.023 1.00 0.39 \ ATOM 217 NH1 ARG D 23 199.199 -12.804 230.858 1.00 0.39 \ ATOM 218 NH2 ARG D 23 199.425 -14.403 232.475 1.00 0.39 \ ATOM 219 N SER D 24 196.439 -18.946 233.737 1.00 -1.00 \ ATOM 220 CA SER D 24 196.683 -20.298 233.288 1.00 -1.00 \ ATOM 221 C SER D 24 195.446 -21.133 233.529 1.00 -1.00 \ ATOM 222 O SER D 24 195.175 -21.517 234.665 1.00 -1.00 \ ATOM 223 CB SER D 24 197.859 -20.904 234.035 1.00 -1.00 \ ATOM 224 OG SER D 24 198.866 -21.286 233.121 1.00 -1.00 \ ATOM 225 N LYS D 25 194.719 -21.456 232.469 1.00 -1.00 \ ATOM 226 CA LYS D 25 193.568 -22.354 232.582 1.00 -1.00 \ ATOM 227 C LYS D 25 193.374 -23.144 231.288 1.00 -1.00 \ ATOM 228 O LYS D 25 193.338 -22.568 230.192 1.00 -1.00 \ ATOM 229 CB LYS D 25 192.279 -21.588 232.909 1.00 -1.00 \ ATOM 230 CG LYS D 25 192.066 -21.206 234.371 1.00 -1.00 \ ATOM 231 CD LYS D 25 190.612 -20.763 234.611 1.00 -1.00 \ ATOM 232 CE LYS D 25 190.130 -19.761 233.554 1.00 -1.00 \ ATOM 233 NZ LYS D 25 188.676 -19.475 233.636 1.00 -1.00 \ """, "e5meiDP1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5meiDP1_csv", state=0, origin=1) cmd.zoom("e5meiDP1_csv", animate=-1)