cmd.read_pdbstr("""\ ATOM 1 N VAL D 2 -7.785 -3.062 -27.799 1.00 -1.00 \ ATOM 2 CA VAL D 2 -6.656 -3.638 -27.001 1.00 -1.00 \ ATOM 3 C VAL D 2 -5.354 -3.698 -27.810 1.00 -1.00 \ ATOM 4 O VAL D 2 -5.361 -3.855 -29.034 1.00 -1.00 \ ATOM 5 CB VAL D 2 -7.012 -5.034 -26.393 1.00 -1.00 \ ATOM 6 CG1 VAL D 2 -6.952 -6.160 -27.423 1.00 -1.00 \ ATOM 7 CG2 VAL D 2 -6.125 -5.364 -25.198 1.00 -1.00 \ ATOM 8 N ASN D 3 -4.234 -3.585 -27.104 1.00 -0.47 \ ATOM 9 CA ASN D 3 -2.921 -3.527 -27.741 1.00 -0.47 \ ATOM 10 C ASN D 3 -2.506 -4.875 -28.332 1.00 -0.47 \ ATOM 11 O ASN D 3 -1.531 -4.945 -29.059 1.00 -0.47 \ ATOM 12 CB ASN D 3 -1.877 -2.962 -26.767 1.00 -0.47 \ ATOM 13 CG ASN D 3 -2.209 -1.538 -26.328 1.00 -0.47 \ ATOM 14 OD1 ASN D 3 -2.372 -0.640 -27.161 1.00 -0.47 \ ATOM 15 ND2 ASN D 3 -2.328 -1.329 -25.017 1.00 -0.47 \ ATOM 16 N GLN D 4 -3.267 -5.923 -28.027 1.00 0.23 \ ATOM 17 CA GLN D 4 -3.174 -7.228 -28.691 1.00 0.23 \ ATOM 18 C GLN D 4 -3.758 -7.255 -30.118 1.00 0.23 \ ATOM 19 O GLN D 4 -3.197 -7.874 -31.038 1.00 0.23 \ ATOM 20 CB GLN D 4 -3.929 -8.247 -27.839 1.00 0.23 \ ATOM 21 CG GLN D 4 -3.459 -9.667 -27.998 1.00 0.23 \ ATOM 22 CD GLN D 4 -3.629 -10.458 -26.717 1.00 0.23 \ ATOM 23 OE1 GLN D 4 -4.470 -11.364 -26.636 1.00 0.23 \ ATOM 24 NE2 GLN D 4 -2.830 -10.119 -25.703 1.00 0.23 \ ATOM 25 N HIS D 5 -4.901 -6.599 -30.285 1.00 -0.04 \ ATOM 26 CA HIS D 5 -5.562 -6.509 -31.594 1.00 -0.04 \ ATOM 27 C HIS D 5 -4.701 -5.643 -32.531 1.00 -0.04 \ ATOM 28 O HIS D 5 -4.216 -6.130 -33.542 1.00 -0.04 \ ATOM 29 CB HIS D 5 -6.967 -5.945 -31.447 1.00 -0.04 \ ATOM 30 CG HIS D 5 -7.811 -6.087 -32.672 1.00 -0.04 \ ATOM 31 ND1 HIS D 5 -8.181 -7.309 -33.185 1.00 -0.04 \ ATOM 32 CD2 HIS D 5 -8.386 -5.156 -33.465 1.00 -0.04 \ ATOM 33 CE1 HIS D 5 -8.936 -7.127 -34.252 1.00 -0.04 \ ATOM 34 NE2 HIS D 5 -9.073 -5.827 -34.446 1.00 -0.04 \ ATOM 35 N LEU D 6 -4.437 -4.403 -32.133 1.00 1.15 \ ATOM 36 CA LEU D 6 -3.484 -3.548 -32.844 1.00 1.15 \ ATOM 37 C LEU D 6 -2.206 -4.347 -33.180 1.00 1.15 \ ATOM 38 O LEU D 6 -1.815 -4.384 -34.346 1.00 1.15 \ ATOM 39 CB LEU D 6 -3.157 -2.278 -32.049 1.00 1.15 \ ATOM 40 CG LEU D 6 -4.294 -1.411 -31.491 1.00 1.15 \ ATOM 41 CD1 LEU D 6 -3.769 -0.096 -30.918 1.00 1.15 \ ATOM 42 CD2 LEU D 6 -5.358 -1.151 -32.551 1.00 1.15 \ ATOM 43 N CYS D 7 -1.599 -5.020 -32.184 1.00 1.70 \ ATOM 44 CA CYS D 7 -0.486 -5.992 -32.389 1.00 1.70 \ ATOM 45 C CYS D 7 -0.693 -7.028 -33.500 1.00 1.70 \ ATOM 46 O CYS D 7 0.221 -7.300 -34.282 1.00 1.70 \ ATOM 47 CB CYS D 7 -0.169 -6.791 -31.107 1.00 1.70 \ ATOM 48 SG CYS D 7 1.466 -7.578 -31.072 1.00 1.70 \ ATOM 49 N GLY D 8 -1.875 -7.638 -33.528 1.00 0.71 \ ATOM 50 CA GLY D 8 -2.182 -8.639 -34.522 1.00 0.71 \ ATOM 51 C GLY D 8 -2.123 -8.076 -35.940 1.00 0.71 \ ATOM 52 O GLY D 8 -1.680 -8.774 -36.901 1.00 0.71 \ ATOM 53 N SER D 9 -2.604 -6.835 -36.062 1.00 -0.48 \ ATOM 54 CA SER D 9 -2.498 -6.091 -37.307 1.00 -0.48 \ ATOM 55 C SER D 9 -1.060 -6.121 -37.795 1.00 -0.48 \ ATOM 56 O SER D 9 -0.819 -6.510 -38.919 1.00 -0.48 \ ATOM 57 CB SER D 9 -2.949 -4.632 -37.113 1.00 -0.48 \ ATOM 58 OG SER D 9 -3.291 -4.077 -38.338 1.00 -0.48 \ ATOM 59 N HIS D 10 -0.108 -5.759 -36.931 1.00 -0.23 \ ATOM 60 CA HIS D 10 1.356 -5.711 -37.281 1.00 -0.23 \ ATOM 61 C HIS D 10 1.939 -7.136 -37.567 1.00 -0.23 \ ATOM 62 O HIS D 10 2.718 -7.326 -38.489 1.00 -0.23 \ ATOM 63 CB HIS D 10 2.201 -4.982 -36.159 1.00 -0.23 \ ATOM 64 CG HIS D 10 1.902 -3.522 -35.972 1.00 -0.23 \ ATOM 65 ND1 HIS D 10 2.552 -2.544 -36.670 1.00 -0.23 \ ATOM 66 CD2 HIS D 10 1.057 -2.873 -35.133 1.00 -0.23 \ ATOM 67 CE1 HIS D 10 2.100 -1.362 -36.309 1.00 -0.23 \ ATOM 68 NE2 HIS D 10 1.202 -1.529 -35.357 1.00 -0.23 \ ATOM 69 N LEU D 11 1.562 -8.137 -36.769 1.00 1.70 \ ATOM 70 CA LEU D 11 1.904 -9.556 -37.056 1.00 1.70 \ ATOM 71 C LEU D 11 1.507 -10.090 -38.428 1.00 1.70 \ ATOM 72 O LEU D 11 2.314 -10.702 -39.124 1.00 1.70 \ ATOM 73 CB LEU D 11 1.286 -10.467 -35.999 1.00 1.70 \ ATOM 74 CG LEU D 11 1.856 -10.303 -34.581 1.00 1.70 \ ATOM 75 CD1 LEU D 11 0.963 -11.018 -33.577 1.00 1.70 \ ATOM 76 CD2 LEU D 11 3.258 -10.864 -34.511 1.00 1.70 \ ATOM 77 N VAL D 12 0.285 -9.830 -38.850 1.00 0.71 \ ATOM 78 CA VAL D 12 -0.181 -10.374 -40.136 1.00 0.71 \ ATOM 79 C VAL D 12 0.585 -9.736 -41.311 1.00 0.71 \ ATOM 80 O VAL D 12 1.004 -10.451 -42.270 1.00 0.71 \ ATOM 81 CB VAL D 12 -1.722 -10.355 -40.276 1.00 0.71 \ ATOM 82 CG1 VAL D 12 -2.345 -11.204 -39.167 1.00 0.71 \ ATOM 83 CG2 VAL D 12 -2.314 -8.969 -40.199 1.00 0.71 \ ATOM 84 N GLU D 13 0.866 -8.432 -41.192 1.00 0.66 \ ATOM 85 CA GLU D 13 1.659 -7.731 -42.189 1.00 0.66 \ ATOM 86 C GLU D 13 3.056 -8.298 -42.192 1.00 0.66 \ ATOM 87 O GLU D 13 3.608 -8.496 -43.264 1.00 0.66 \ ATOM 88 CB GLU D 13 1.658 -6.199 -41.989 1.00 0.66 \ ATOM 89 CG GLU D 13 0.316 -5.572 -42.416 1.00 0.66 \ ATOM 90 CD GLU D 13 0.001 -4.233 -41.748 1.00 0.66 \ ATOM 91 OE1 GLU D 13 -1.201 -3.919 -41.549 1.00 0.66 \ ATOM 92 OE2 GLU D 13 0.946 -3.501 -41.392 1.00 0.66 \ ATOM 93 N ALA D 14 3.584 -8.613 -41.010 1.00 -0.02 \ ATOM 94 CA ALA D 14 4.900 -9.251 -40.895 1.00 -0.02 \ ATOM 95 C ALA D 14 4.908 -10.650 -41.514 1.00 -0.02 \ ATOM 96 O ALA D 14 5.756 -10.961 -42.349 1.00 -0.02 \ ATOM 97 CB ALA D 14 5.343 -9.275 -39.442 1.00 -0.02 \ ATOM 98 N LEU D 15 3.935 -11.482 -41.161 1.00 1.70 \ ATOM 99 CA LEU D 15 3.812 -12.800 -41.799 1.00 1.70 \ ATOM 100 C LEU D 15 3.667 -12.691 -43.337 1.00 1.70 \ ATOM 101 O LEU D 15 4.255 -13.479 -44.081 1.00 1.70 \ ATOM 102 CB LEU D 15 2.621 -13.559 -41.198 1.00 1.70 \ ATOM 103 CG LEU D 15 2.636 -13.886 -39.694 1.00 1.70 \ ATOM 104 CD1 LEU D 15 1.386 -14.634 -39.246 1.00 1.70 \ ATOM 105 CD2 LEU D 15 3.898 -14.671 -39.380 1.00 1.70 \ ATOM 106 N TYR D 16 2.910 -11.710 -43.834 1.00 -0.22 \ ATOM 107 CA TYR D 16 2.771 -11.532 -45.283 1.00 -0.22 \ ATOM 108 C TYR D 16 4.137 -11.534 -45.946 1.00 -0.22 \ ATOM 109 O TYR D 16 4.424 -12.352 -46.854 1.00 -0.22 \ ATOM 110 CB TYR D 16 1.966 -10.254 -45.629 1.00 -0.22 \ ATOM 111 CG TYR D 16 2.010 -9.901 -47.085 1.00 -0.22 \ ATOM 112 CD1 TYR D 16 1.165 -10.507 -47.995 1.00 -0.22 \ ATOM 113 CD2 TYR D 16 2.925 -8.973 -47.562 1.00 -0.22 \ ATOM 114 CE1 TYR D 16 1.223 -10.194 -49.336 1.00 -0.22 \ ATOM 115 CE2 TYR D 16 2.996 -8.673 -48.902 1.00 -0.22 \ ATOM 116 CZ TYR D 16 2.142 -9.282 -49.780 1.00 -0.22 \ ATOM 117 OH TYR D 16 2.228 -8.966 -51.115 1.00 -0.22 \ ATOM 118 N LEU D 17 4.996 -10.651 -45.440 1.00 -0.23 \ ATOM 119 CA LEU D 17 6.333 -10.450 -45.960 1.00 -0.23 \ ATOM 120 C LEU D 17 7.291 -11.607 -45.650 1.00 -0.23 \ ATOM 121 O LEU D 17 8.087 -11.991 -46.505 1.00 -0.23 \ ATOM 122 CB LEU D 17 6.927 -9.131 -45.414 1.00 -0.23 \ ATOM 123 CG LEU D 17 6.327 -7.835 -45.976 1.00 -0.23 \ ATOM 124 CD1 LEU D 17 7.013 -6.634 -45.333 1.00 -0.23 \ ATOM 125 CD2 LEU D 17 6.468 -7.758 -47.502 1.00 -0.23 \ ATOM 126 N VAL D 18 7.237 -12.129 -44.430 1.00 0.26 \ ATOM 127 CA VAL D 18 8.140 -13.210 -44.019 1.00 0.26 \ ATOM 128 C VAL D 18 7.819 -14.499 -44.789 1.00 0.26 \ ATOM 129 O VAL D 18 8.730 -15.176 -45.282 1.00 0.26 \ ATOM 130 CB VAL D 18 8.065 -13.508 -42.494 1.00 0.26 \ ATOM 131 CG1 VAL D 18 8.952 -14.704 -42.132 1.00 0.26 \ ATOM 132 CG2 VAL D 18 8.503 -12.317 -41.674 1.00 0.26 \ ATOM 133 N CYS D 19 6.533 -14.833 -44.873 1.00 1.70 \ ATOM 134 CA CYS D 19 6.091 -16.131 -45.402 1.00 1.70 \ ATOM 135 C CYS D 19 6.089 -16.261 -46.910 1.00 1.70 \ ATOM 136 O CYS D 19 6.373 -17.349 -47.440 1.00 1.70 \ ATOM 137 CB CYS D 19 4.728 -16.495 -44.858 1.00 1.70 \ ATOM 138 SG CYS D 19 4.702 -16.689 -43.064 1.00 1.70 \ ATOM 139 N GLY D 20 5.807 -15.167 -47.611 1.00 -0.16 \ ATOM 140 CA GLY D 20 5.925 -15.136 -49.078 1.00 -0.16 \ ATOM 141 C GLY D 20 4.902 -16.049 -49.745 1.00 -0.16 \ ATOM 142 O GLY D 20 3.737 -16.085 -49.328 1.00 -0.16 \ ATOM 143 N GLU D 21 5.352 -16.798 -50.762 1.00 0.19 \ ATOM 144 CA GLU D 21 4.491 -17.721 -51.534 1.00 0.19 \ ATOM 145 C GLU D 21 3.798 -18.796 -50.681 1.00 0.19 \ ATOM 146 O GLU D 21 2.702 -19.216 -51.020 1.00 0.19 \ ATOM 147 CB GLU D 21 5.286 -18.389 -52.671 1.00 0.19 \ ATOM 148 N ARG D 22 4.432 -19.211 -49.579 1.00 -0.61 \ ATOM 149 CA ARG D 22 3.880 -20.209 -48.649 1.00 -0.61 \ ATOM 150 C ARG D 22 2.558 -19.811 -48.034 1.00 -0.61 \ ATOM 151 O ARG D 22 1.591 -20.572 -48.085 1.00 -0.61 \ ATOM 152 CB ARG D 22 4.861 -20.484 -47.521 1.00 -0.61 \ ATOM 153 CG ARG D 22 6.061 -21.291 -47.954 1.00 -0.61 \ ATOM 154 CD ARG D 22 7.008 -21.480 -46.783 1.00 -0.61 \ ATOM 155 NE ARG D 22 7.759 -20.253 -46.508 1.00 -0.61 \ ATOM 156 CZ ARG D 22 8.489 -20.007 -45.416 1.00 -0.61 \ ATOM 157 NH1 ARG D 22 8.595 -20.893 -44.428 1.00 -0.61 \ ATOM 158 NH2 ARG D 22 9.112 -18.835 -45.310 1.00 -0.61 \ ATOM 159 N GLY D 23 2.530 -18.617 -47.447 1.00 1.70 \ ATOM 160 CA GLY D 23 1.337 -18.086 -46.800 1.00 1.70 \ ATOM 161 C GLY D 23 1.390 -18.378 -45.330 1.00 1.70 \ ATOM 162 O GLY D 23 2.415 -18.820 -44.832 1.00 1.70 \ ATOM 163 N PHE D 24 0.291 -18.163 -44.620 1.00 1.13 \ ATOM 164 CA PHE D 24 0.323 -18.290 -43.180 1.00 1.13 \ ATOM 165 C PHE D 24 -1.028 -18.541 -42.578 1.00 1.13 \ ATOM 166 O PHE D 24 -2.048 -18.455 -43.238 1.00 1.13 \ ATOM 167 CB PHE D 24 0.956 -17.041 -42.510 1.00 1.13 \ ATOM 168 CG PHE D 24 0.179 -15.772 -42.702 1.00 1.13 \ ATOM 169 CD1 PHE D 24 -0.810 -15.418 -41.826 1.00 1.13 \ ATOM 170 CD2 PHE D 24 0.464 -14.935 -43.761 1.00 1.13 \ ATOM 171 CE1 PHE D 24 -1.521 -14.256 -41.994 1.00 1.13 \ ATOM 172 CE2 PHE D 24 -0.237 -13.760 -43.928 1.00 1.13 \ ATOM 173 CZ PHE D 24 -1.240 -13.434 -43.043 1.00 1.13 \ ATOM 174 N PHE D 25 -1.007 -18.883 -41.302 1.00 0.51 \ ATOM 175 CA PHE D 25 -2.220 -19.011 -40.533 1.00 0.51 \ ATOM 176 C PHE D 25 -2.010 -18.124 -39.342 1.00 0.51 \ ATOM 177 O PHE D 25 -0.926 -18.115 -38.751 1.00 0.51 \ ATOM 178 CB PHE D 25 -2.507 -20.482 -40.126 1.00 0.51 \ ATOM 179 CG PHE D 25 -1.457 -21.081 -39.260 1.00 0.51 \ ATOM 180 CD1 PHE D 25 -1.576 -21.041 -37.885 1.00 0.51 \ ATOM 181 CD2 PHE D 25 -0.344 -21.656 -39.817 1.00 0.51 \ ATOM 182 CE1 PHE D 25 -0.582 -21.572 -37.075 1.00 0.51 \ ATOM 183 CE2 PHE D 25 0.648 -22.204 -39.025 1.00 0.51 \ ATOM 184 CZ PHE D 25 0.535 -22.150 -37.641 1.00 0.51 \ ATOM 185 N TYR D 26 -3.021 -17.309 -39.083 1.00 -0.25 \ ATOM 186 CA TYR D 26 -3.097 -16.420 -37.953 1.00 -0.25 \ ATOM 187 C TYR D 26 -4.331 -16.911 -37.219 1.00 -0.25 \ ATOM 188 O TYR D 26 -5.352 -17.179 -37.870 1.00 -0.25 \ ATOM 189 CB TYR D 26 -3.320 -14.966 -38.414 1.00 -0.25 \ ATOM 190 CG TYR D 26 -3.535 -14.052 -37.248 1.00 -0.25 \ ATOM 191 CD1 TYR D 26 -2.466 -13.666 -36.466 1.00 -0.25 \ ATOM 192 CD2 TYR D 26 -4.824 -13.622 -36.878 1.00 -0.25 \ ATOM 193 CE1 TYR D 26 -2.654 -12.831 -35.375 1.00 -0.25 \ ATOM 194 CE2 TYR D 26 -5.015 -12.810 -35.776 1.00 -0.25 \ ATOM 195 CZ TYR D 26 -3.930 -12.426 -35.027 1.00 -0.25 \ ATOM 196 OH TYR D 26 -4.076 -11.618 -33.940 1.00 -0.25 \ ATOM 197 N THR D 27 -4.250 -17.005 -35.892 1.00 -0.98 \ ATOM 198 CA THR D 27 -5.360 -17.510 -35.066 1.00 -0.98 \ ATOM 199 C THR D 27 -5.214 -17.082 -33.584 1.00 -0.98 \ ATOM 200 O THR D 27 -4.651 -17.816 -32.793 1.00 -0.98 \ ATOM 201 CB THR D 27 -5.530 -19.074 -35.207 1.00 -0.98 \ ATOM 202 OG1 THR D 27 -4.378 -19.670 -35.841 1.00 -0.98 \ ATOM 203 CG2 THR D 27 -6.789 -19.437 -36.044 1.00 -0.98 \ ATOM 204 N PRO D 28 -5.758 -15.905 -33.203 1.00 -0.79 \ ATOM 205 CA PRO D 28 -5.456 -15.194 -31.944 1.00 -0.79 \ ATOM 206 C PRO D 28 -5.944 -15.861 -30.650 1.00 -0.79 \ ATOM 207 O PRO D 28 -5.761 -15.306 -29.562 1.00 -0.79 \ ATOM 208 CB PRO D 28 -6.221 -13.875 -32.122 1.00 -0.79 \ ATOM 209 CG PRO D 28 -7.443 -14.296 -32.865 1.00 -0.79 \ ATOM 210 CD PRO D 28 -6.974 -15.353 -33.827 1.00 -0.79 \ """, "e5mt3D1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt3D1_csv", state=0, origin=1) cmd.zoom("e5mt3D1_csv", animate=-1)