cmd.read_pdbstr("""\ ATOM 1 N GLN R 4 -11.265 -51.375 -16.371 1.00 0.22 \ ATOM 2 CA GLN R 4 -10.105 -50.632 -15.782 1.00 0.22 \ ATOM 3 C GLN R 4 -10.509 -49.209 -15.336 1.00 0.22 \ ATOM 4 O GLN R 4 -11.678 -48.948 -15.063 1.00 0.22 \ ATOM 5 CB GLN R 4 -8.951 -50.568 -16.789 1.00 0.22 \ ATOM 6 N HIS R 5 -9.520 -48.328 -15.210 1.00 -0.04 \ ATOM 7 CA HIS R 5 -9.732 -46.894 -15.156 1.00 -0.04 \ ATOM 8 C HIS R 5 -9.107 -46.292 -16.444 1.00 -0.04 \ ATOM 9 O HIS R 5 -8.001 -46.668 -16.847 1.00 -0.04 \ ATOM 10 CB HIS R 5 -9.088 -46.304 -13.894 1.00 -0.04 \ ATOM 11 CG HIS R 5 -9.859 -46.555 -12.623 1.00 -0.04 \ ATOM 12 ND1 HIS R 5 -9.554 -47.587 -11.756 1.00 -0.04 \ ATOM 13 CD2 HIS R 5 -10.887 -45.880 -12.050 1.00 -0.04 \ ATOM 14 CE1 HIS R 5 -10.374 -47.547 -10.721 1.00 -0.04 \ ATOM 15 NE2 HIS R 5 -11.193 -46.522 -10.876 1.00 -0.04 \ ATOM 16 N LEU R 6 -9.826 -45.359 -17.073 1.00 1.15 \ ATOM 17 CA LEU R 6 -9.359 -44.661 -18.270 1.00 1.15 \ ATOM 18 C LEU R 6 -8.879 -43.230 -17.963 1.00 1.15 \ ATOM 19 O LEU R 6 -9.674 -42.350 -17.685 1.00 1.15 \ ATOM 20 CB LEU R 6 -10.505 -44.645 -19.294 1.00 1.15 \ ATOM 21 CG LEU R 6 -10.951 -46.037 -19.741 1.00 1.15 \ ATOM 22 CD1 LEU R 6 -12.001 -46.007 -20.834 1.00 1.15 \ ATOM 23 CD2 LEU R 6 -9.738 -46.835 -20.230 1.00 1.15 \ ATOM 24 N CYS R 7 -7.585 -43.000 -18.006 1.00 1.70 \ ATOM 25 CA CYS R 7 -7.059 -41.688 -17.668 1.00 1.70 \ ATOM 26 C CYS R 7 -6.043 -41.225 -18.681 1.00 1.70 \ ATOM 27 O CYS R 7 -5.422 -42.029 -19.387 1.00 1.70 \ ATOM 28 CB CYS R 7 -6.329 -41.731 -16.330 1.00 1.70 \ ATOM 29 SG CYS R 7 -7.342 -42.234 -14.941 1.00 1.70 \ ATOM 30 N GLY R 8 -5.802 -39.920 -18.658 1.00 0.71 \ ATOM 31 CA GLY R 8 -4.854 -39.279 -19.549 1.00 0.71 \ ATOM 32 C GLY R 8 -5.117 -39.670 -20.990 1.00 0.71 \ ATOM 33 O GLY R 8 -6.265 -39.661 -21.440 1.00 0.71 \ ATOM 34 N SER R 9 -4.064 -40.050 -21.698 1.00 -0.48 \ ATOM 35 CA SER R 9 -4.158 -40.359 -23.156 1.00 -0.48 \ ATOM 36 C SER R 9 -4.918 -41.651 -23.438 1.00 -0.48 \ ATOM 37 O SER R 9 -5.321 -41.856 -24.586 1.00 -0.48 \ ATOM 38 CB SER R 9 -2.771 -40.477 -23.796 1.00 -0.48 \ ATOM 39 OG SER R 9 -2.042 -41.463 -23.133 1.00 -0.48 \ ATOM 40 N HIS R 10 -5.096 -42.534 -22.424 1.00 -0.23 \ ATOM 41 CA HIS R 10 -5.905 -43.739 -22.647 1.00 -0.23 \ ATOM 42 C HIS R 10 -7.376 -43.370 -22.670 1.00 -0.23 \ ATOM 43 O HIS R 10 -8.120 -43.970 -23.380 1.00 -0.23 \ ATOM 44 CB HIS R 10 -5.640 -44.881 -21.622 1.00 -0.23 \ ATOM 45 CG HIS R 10 -4.198 -45.295 -21.516 1.00 -0.23 \ ATOM 46 ND1 HIS R 10 -3.518 -45.939 -22.539 1.00 -0.23 \ ATOM 47 CD2 HIS R 10 -3.302 -45.131 -20.513 1.00 -0.23 \ ATOM 48 CE1 HIS R 10 -2.274 -46.158 -22.171 1.00 -0.23 \ ATOM 49 NE2 HIS R 10 -2.118 -45.696 -20.936 1.00 -0.23 \ ATOM 50 N LEU R 11 -7.791 -42.357 -21.923 1.00 1.70 \ ATOM 51 CA LEU R 11 -9.162 -41.874 -22.000 1.00 1.70 \ ATOM 52 C LEU R 11 -9.438 -41.273 -23.372 1.00 1.70 \ ATOM 53 O LEU R 11 -10.497 -41.506 -23.906 1.00 1.70 \ ATOM 54 CB LEU R 11 -9.428 -40.869 -20.887 1.00 1.70 \ ATOM 55 CG LEU R 11 -10.805 -40.227 -20.861 1.00 1.70 \ ATOM 56 CD1 LEU R 11 -11.898 -41.250 -20.630 1.00 1.70 \ ATOM 57 CD2 LEU R 11 -10.783 -39.163 -19.804 1.00 1.70 \ ATOM 58 N VAL R 12 -8.473 -40.535 -23.933 1.00 0.71 \ ATOM 59 CA VAL R 12 -8.564 -39.978 -25.273 1.00 0.71 \ ATOM 60 C VAL R 12 -8.590 -41.097 -26.322 1.00 0.71 \ ATOM 61 O VAL R 12 -9.370 -41.039 -27.236 1.00 0.71 \ ATOM 62 CB VAL R 12 -7.380 -39.050 -25.629 1.00 0.71 \ ATOM 63 CG1 VAL R 12 -7.335 -38.781 -27.133 1.00 0.71 \ ATOM 64 CG2 VAL R 12 -7.451 -37.767 -24.852 1.00 0.71 \ ATOM 65 N GLU R 13 -7.710 -42.083 -26.218 1.00 0.66 \ ATOM 66 CA GLU R 13 -7.803 -43.230 -27.135 1.00 0.66 \ ATOM 67 C GLU R 13 -9.146 -43.982 -27.005 1.00 0.66 \ ATOM 68 O GLU R 13 -9.633 -44.498 -27.978 1.00 0.66 \ ATOM 69 CB GLU R 13 -6.590 -44.180 -27.019 1.00 0.66 \ ATOM 70 CG GLU R 13 -5.379 -43.777 -27.901 1.00 0.66 \ ATOM 71 CD GLU R 13 -5.709 -43.480 -29.394 1.00 0.66 \ ATOM 72 OE1 GLU R 13 -5.407 -42.335 -29.872 1.00 0.66 \ ATOM 73 OE2 GLU R 13 -6.271 -44.378 -30.092 1.00 0.66 \ ATOM 74 N ALA R 14 -9.759 -44.041 -25.813 1.00 -0.00 \ ATOM 75 CA ALA R 14 -11.071 -44.656 -25.701 1.00 -0.00 \ ATOM 76 C ALA R 14 -12.151 -43.728 -26.245 1.00 -0.00 \ ATOM 77 O ALA R 14 -13.192 -44.224 -26.734 1.00 -0.00 \ ATOM 78 CB ALA R 14 -11.395 -45.034 -24.282 1.00 -0.00 \ ATOM 79 N LEU R 15 -11.943 -42.412 -26.130 1.00 1.70 \ ATOM 80 CA LEU R 15 -12.882 -41.453 -26.752 1.00 1.70 \ ATOM 81 C LEU R 15 -12.848 -41.602 -28.260 1.00 1.70 \ ATOM 82 O LEU R 15 -13.885 -41.580 -28.900 1.00 1.70 \ ATOM 83 CB LEU R 15 -12.593 -39.984 -26.389 1.00 1.70 \ ATOM 84 CG LEU R 15 -13.151 -39.515 -25.046 1.00 1.70 \ ATOM 85 CD1 LEU R 15 -12.448 -38.230 -24.582 1.00 1.70 \ ATOM 86 CD2 LEU R 15 -14.663 -39.349 -25.120 1.00 1.70 \ ATOM 87 N TYR R 16 -11.654 -41.772 -28.803 1.00 -0.22 \ ATOM 88 CA TYR R 16 -11.484 -42.018 -30.257 1.00 -0.22 \ ATOM 89 C TYR R 16 -12.137 -43.300 -30.752 1.00 -0.22 \ ATOM 90 O TYR R 16 -12.854 -43.256 -31.694 1.00 -0.22 \ ATOM 91 CB TYR R 16 -10.012 -41.956 -30.668 1.00 -0.22 \ ATOM 92 CG TYR R 16 -9.846 -41.880 -32.173 1.00 -0.22 \ ATOM 93 CD1 TYR R 16 -10.053 -40.684 -32.845 1.00 -0.22 \ ATOM 94 CD2 TYR R 16 -9.549 -43.012 -32.933 1.00 -0.22 \ ATOM 95 CE1 TYR R 16 -9.988 -40.623 -34.243 1.00 -0.22 \ ATOM 96 CE2 TYR R 16 -9.466 -42.958 -34.328 1.00 -0.22 \ ATOM 97 CZ TYR R 16 -9.672 -41.745 -34.982 1.00 -0.22 \ ATOM 98 OH TYR R 16 -9.544 -41.618 -36.375 1.00 -0.22 \ ATOM 99 N LEU R 17 -11.890 -44.437 -30.112 1.00 -0.23 \ ATOM 100 CA LEU R 17 -12.626 -45.668 -30.393 1.00 -0.23 \ ATOM 101 C LEU R 17 -14.160 -45.501 -30.472 1.00 -0.23 \ ATOM 102 O LEU R 17 -14.776 -45.872 -31.441 1.00 -0.23 \ ATOM 103 CB LEU R 17 -12.266 -46.699 -29.335 1.00 -0.23 \ ATOM 104 CG LEU R 17 -12.945 -48.094 -29.291 1.00 -0.23 \ ATOM 105 CD1 LEU R 17 -12.450 -49.027 -30.361 1.00 -0.23 \ ATOM 106 CD2 LEU R 17 -12.667 -48.674 -27.928 1.00 -0.23 \ ATOM 107 N VAL R 18 -14.780 -44.952 -29.436 1.00 0.28 \ ATOM 108 CA VAL R 18 -16.265 -44.856 -29.411 1.00 0.28 \ ATOM 109 C VAL R 18 -16.796 -43.746 -30.384 1.00 0.28 \ ATOM 110 O VAL R 18 -17.739 -43.950 -31.116 1.00 0.28 \ ATOM 111 CB VAL R 18 -16.763 -44.644 -27.951 1.00 0.28 \ ATOM 112 CG1 VAL R 18 -18.274 -44.430 -27.895 1.00 0.28 \ ATOM 113 CG2 VAL R 18 -16.331 -45.806 -27.047 1.00 0.28 \ ATOM 114 N CYS R 19 -16.168 -42.581 -30.395 1.00 1.70 \ ATOM 115 CA CYS R 19 -16.648 -41.462 -31.180 1.00 1.70 \ ATOM 116 C CYS R 19 -15.882 -41.379 -32.499 1.00 1.70 \ ATOM 117 O CYS R 19 -16.385 -41.859 -33.521 1.00 1.70 \ ATOM 118 CB CYS R 19 -16.553 -40.185 -30.347 1.00 1.70 \ ATOM 119 SG CYS R 19 -17.373 -40.337 -28.753 1.00 1.70 \ ATOM 120 N GLY R 20 -14.683 -40.804 -32.502 1.00 -0.16 \ ATOM 121 CA GLY R 20 -13.722 -40.925 -33.605 1.00 -0.16 \ ATOM 122 C GLY R 20 -14.128 -40.588 -35.027 1.00 -0.16 \ ATOM 123 O GLY R 20 -13.455 -39.784 -35.682 1.00 -0.16 \ ATOM 124 N GLU R 21 -15.185 -41.229 -35.526 1.00 0.19 \ ATOM 125 CA GLU R 21 -15.751 -40.885 -36.825 1.00 0.19 \ ATOM 126 C GLU R 21 -16.732 -39.721 -36.641 1.00 0.19 \ ATOM 127 O GLU R 21 -16.875 -38.915 -37.521 1.00 0.19 \ ATOM 128 CB GLU R 21 -16.464 -42.076 -37.462 1.00 0.19 \ ATOM 129 CG GLU R 21 -15.638 -43.348 -37.572 1.00 0.19 \ ATOM 130 CD GLU R 21 -16.423 -44.490 -38.215 1.00 0.19 \ ATOM 131 OE1 GLU R 21 -16.846 -45.417 -37.483 1.00 0.19 \ ATOM 132 OE2 GLU R 21 -16.624 -44.462 -39.459 1.00 0.19 \ ATOM 133 N ARG R 22 -17.397 -39.636 -35.497 1.00 -0.61 \ ATOM 134 CA ARG R 22 -18.344 -38.556 -35.237 1.00 -0.61 \ ATOM 135 C ARG R 22 -17.673 -37.334 -34.688 1.00 -0.61 \ ATOM 136 O ARG R 22 -18.253 -36.245 -34.717 1.00 -0.61 \ ATOM 137 CB ARG R 22 -19.427 -39.007 -34.255 1.00 -0.61 \ ATOM 138 CG ARG R 22 -20.586 -39.725 -34.922 1.00 -0.61 \ ATOM 139 CD ARG R 22 -21.541 -40.280 -33.883 1.00 -0.61 \ ATOM 140 NE ARG R 22 -21.104 -41.585 -33.393 1.00 -0.61 \ ATOM 141 CZ ARG R 22 -21.423 -42.113 -32.211 1.00 -0.61 \ ATOM 142 NH1 ARG R 22 -22.191 -41.448 -31.345 1.00 -0.61 \ ATOM 143 NH2 ARG R 22 -20.959 -43.323 -31.884 1.00 -0.61 \ ATOM 144 N GLY R 23 -16.463 -37.503 -34.163 1.00 1.70 \ ATOM 145 CA GLY R 23 -15.779 -36.432 -33.455 1.00 1.70 \ ATOM 146 C GLY R 23 -16.175 -36.473 -31.995 1.00 1.70 \ ATOM 147 O GLY R 23 -16.998 -37.267 -31.581 1.00 1.70 \ ATOM 148 N PHE R 24 -15.534 -35.629 -31.202 1.00 1.13 \ ATOM 149 CA PHE R 24 -15.816 -35.588 -29.794 1.00 1.13 \ ATOM 150 C PHE R 24 -15.166 -34.366 -29.251 1.00 1.13 \ ATOM 151 O PHE R 24 -14.476 -33.640 -29.968 1.00 1.13 \ ATOM 152 CB PHE R 24 -15.360 -36.869 -29.041 1.00 1.13 \ ATOM 153 CG PHE R 24 -13.869 -37.153 -29.126 1.00 1.13 \ ATOM 154 CD1 PHE R 24 -12.981 -36.570 -28.232 1.00 1.13 \ ATOM 155 CD2 PHE R 24 -13.375 -38.001 -30.095 1.00 1.13 \ ATOM 156 CE1 PHE R 24 -11.613 -36.824 -28.327 1.00 1.13 \ ATOM 157 CE2 PHE R 24 -12.017 -38.256 -30.191 1.00 1.13 \ ATOM 158 CZ PHE R 24 -11.145 -37.672 -29.308 1.00 1.13 \ ATOM 159 N PHE R 25 -15.417 -34.140 -27.967 1.00 0.52 \ ATOM 160 CA PHE R 25 -14.829 -33.038 -27.218 1.00 0.52 \ ATOM 161 C PHE R 25 -14.114 -33.672 -26.040 1.00 0.52 \ ATOM 162 O PHE R 25 -14.610 -34.647 -25.475 1.00 0.52 \ ATOM 163 CB PHE R 25 -15.900 -32.059 -26.725 1.00 0.52 \ ATOM 164 CG PHE R 25 -17.087 -32.719 -26.045 1.00 0.52 \ ATOM 165 CD1 PHE R 25 -18.068 -33.389 -26.791 1.00 0.52 \ ATOM 166 CD2 PHE R 25 -17.248 -32.631 -24.663 1.00 0.52 \ ATOM 167 CE1 PHE R 25 -19.156 -33.980 -26.162 1.00 0.52 \ ATOM 168 CE2 PHE R 25 -18.342 -33.211 -24.035 1.00 0.52 \ ATOM 169 CZ PHE R 25 -19.297 -33.883 -24.786 1.00 0.52 \ ATOM 170 N TYR R 26 -12.932 -33.155 -25.733 1.00 -0.24 \ ATOM 171 CA TYR R 26 -12.156 -33.640 -24.604 1.00 -0.24 \ ATOM 172 C TYR R 26 -11.817 -32.411 -23.796 1.00 -0.24 \ ATOM 173 O TYR R 26 -11.105 -31.522 -24.280 1.00 -0.24 \ ATOM 174 CB TYR R 26 -10.899 -34.417 -25.046 1.00 -0.24 \ ATOM 175 CG TYR R 26 -9.944 -34.696 -23.916 1.00 -0.24 \ ATOM 176 CD1 TYR R 26 -10.232 -35.647 -22.949 1.00 -0.24 \ ATOM 177 CD2 TYR R 26 -8.780 -33.968 -23.792 1.00 -0.24 \ ATOM 178 CE1 TYR R 26 -9.350 -35.879 -21.893 1.00 -0.24 \ ATOM 179 CE2 TYR R 26 -7.902 -34.180 -22.763 1.00 -0.24 \ ATOM 180 CZ TYR R 26 -8.204 -35.113 -21.812 1.00 -0.24 \ ATOM 181 OH TYR R 26 -7.319 -35.294 -20.827 1.00 -0.24 \ ATOM 182 N THR R 27 -12.374 -32.365 -22.590 1.00 -0.98 \ ATOM 183 CA THR R 27 -12.205 -31.243 -21.675 1.00 -0.98 \ ATOM 184 C THR R 27 -11.923 -31.783 -20.267 1.00 -0.98 \ ATOM 185 O THR R 27 -12.860 -32.079 -19.530 1.00 -0.98 \ ATOM 186 CB THR R 27 -13.436 -30.303 -21.724 1.00 -0.98 \ ATOM 187 OG1 THR R 27 -14.517 -30.963 -22.405 1.00 -0.98 \ ATOM 188 CG2 THR R 27 -13.097 -29.009 -22.526 1.00 -0.98 \ ATOM 189 N PRO R 28 -10.633 -31.919 -19.904 1.00 -0.79 \ ATOM 190 CA PRO R 28 -10.242 -32.413 -18.577 1.00 -0.79 \ ATOM 191 C PRO R 28 -10.677 -31.562 -17.354 1.00 -0.79 \ ATOM 192 O PRO R 28 -10.491 -32.026 -16.214 1.00 -0.79 \ ATOM 193 CB PRO R 28 -8.709 -32.486 -18.663 1.00 -0.79 \ ATOM 194 CG PRO R 28 -8.332 -31.501 -19.710 1.00 -0.79 \ ATOM 195 CD PRO R 28 -9.458 -31.504 -20.693 1.00 -0.79 \ ATOM 196 N LYS R 29 -11.163 -30.331 -17.597 1.00 -0.90 \ ATOM 197 CA LYS R 29 -12.023 -29.538 -16.667 1.00 -0.90 \ ATOM 198 C LYS R 29 -11.792 -29.674 -15.149 1.00 -0.90 \ ATOM 199 O LYS R 29 -12.736 -29.911 -14.384 1.00 -0.90 \ ATOM 200 CB LYS R 29 -13.512 -29.814 -16.971 1.00 -0.90 \ """, "e5mt3R1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt3R1_csv", state=0, origin=1) cmd.zoom("e5mt3R1_csv", animate=-1)