cmd.read_pdbstr("""\ ATOM 1 N GLY Y 1 -2.504 -66.312 -15.474 1.00 0.33 \ ATOM 2 CA GLY Y 1 -2.638 -65.320 -16.590 1.00 0.33 \ ATOM 3 C GLY Y 1 -1.377 -64.514 -16.839 1.00 0.33 \ ATOM 4 O GLY Y 1 -0.632 -64.203 -15.898 1.00 0.33 \ ATOM 5 N ILE Y 2 -1.142 -64.194 -18.113 1.00 0.44 \ ATOM 6 CA ILE Y 2 -0.109 -63.230 -18.560 1.00 0.44 \ ATOM 7 C ILE Y 2 -0.085 -61.938 -17.711 1.00 0.44 \ ATOM 8 O ILE Y 2 0.978 -61.357 -17.491 1.00 0.44 \ ATOM 9 CB ILE Y 2 -0.282 -62.917 -20.086 1.00 0.44 \ ATOM 10 CG1 ILE Y 2 0.863 -62.075 -20.649 1.00 0.44 \ ATOM 11 CG2 ILE Y 2 -1.609 -62.236 -20.381 1.00 0.44 \ ATOM 12 N VAL Y 3 -1.261 -61.516 -17.244 1.00 1.08 \ ATOM 13 CA VAL Y 3 -1.426 -60.399 -16.302 1.00 1.08 \ ATOM 14 C VAL Y 3 -0.649 -60.635 -15.010 1.00 1.08 \ ATOM 15 O VAL Y 3 0.055 -59.747 -14.535 1.00 1.08 \ ATOM 16 CB VAL Y 3 -2.923 -60.175 -15.953 1.00 1.08 \ ATOM 17 CG1 VAL Y 3 -3.101 -59.199 -14.781 1.00 1.08 \ ATOM 18 CG2 VAL Y 3 -3.700 -59.692 -17.178 1.00 1.08 \ ATOM 19 N GLU Y 4 -0.793 -61.825 -14.436 1.00 0.21 \ ATOM 20 CA GLU Y 4 -0.020 -62.209 -13.259 1.00 0.21 \ ATOM 21 C GLU Y 4 1.484 -62.255 -13.531 1.00 0.21 \ ATOM 22 O GLU Y 4 2.277 -61.751 -12.752 1.00 0.21 \ ATOM 23 N GLN Y 5 1.868 -62.858 -14.645 1.00 0.00 \ ATOM 24 CA GLN Y 5 3.284 -62.908 -15.039 1.00 0.00 \ ATOM 25 C GLN Y 5 3.907 -61.533 -15.444 1.00 0.00 \ ATOM 26 O GLN Y 5 5.098 -61.302 -15.191 1.00 0.00 \ ATOM 27 CB GLN Y 5 3.475 -63.938 -16.156 1.00 0.00 \ ATOM 28 N CYS Y 6 3.123 -60.630 -16.059 1.00 1.70 \ ATOM 29 CA CYS Y 6 3.689 -59.397 -16.675 1.00 1.70 \ ATOM 30 C CYS Y 6 3.303 -58.041 -16.071 1.00 1.70 \ ATOM 31 O CYS Y 6 4.011 -57.040 -16.264 1.00 1.70 \ ATOM 32 CB CYS Y 6 3.409 -59.381 -18.186 1.00 1.70 \ ATOM 33 SG CYS Y 6 4.117 -60.752 -19.140 1.00 1.70 \ ATOM 34 N CYS Y 7 2.184 -57.997 -15.380 1.00 1.70 \ ATOM 35 CA CYS Y 7 1.700 -56.785 -14.761 1.00 1.70 \ ATOM 36 C CYS Y 7 1.980 -56.802 -13.247 1.00 1.70 \ ATOM 37 O CYS Y 7 2.524 -55.832 -12.708 1.00 1.70 \ ATOM 38 CB CYS Y 7 0.207 -56.657 -15.018 1.00 1.70 \ ATOM 39 SG CYS Y 7 -0.595 -55.223 -14.288 1.00 1.70 \ ATOM 40 N THR Y 8 1.572 -57.883 -12.571 1.00 -0.68 \ ATOM 41 CA THR Y 8 1.854 -58.083 -11.138 1.00 -0.68 \ ATOM 42 C THR Y 8 3.353 -58.329 -10.910 1.00 -0.68 \ ATOM 43 O THR Y 8 3.903 -57.868 -9.925 1.00 -0.68 \ ATOM 44 CB THR Y 8 1.054 -59.269 -10.556 1.00 -0.68 \ ATOM 45 N SER Y 9 4.001 -59.058 -11.818 1.00 -0.80 \ ATOM 46 CA SER Y 9 5.452 -59.300 -11.759 1.00 -0.80 \ ATOM 47 C SER Y 9 6.145 -58.794 -13.026 1.00 -0.80 \ ATOM 48 O SER Y 9 5.490 -58.487 -14.017 1.00 -0.80 \ ATOM 49 CB SER Y 9 5.738 -60.799 -11.543 1.00 -0.80 \ ATOM 50 OG SER Y 9 4.908 -61.628 -12.353 1.00 -0.80 \ ATOM 51 N ILE Y 10 7.469 -58.701 -12.980 1.00 -0.79 \ ATOM 52 CA ILE Y 10 8.269 -58.283 -14.128 1.00 -0.79 \ ATOM 53 C ILE Y 10 8.293 -59.455 -15.102 1.00 -0.79 \ ATOM 54 O ILE Y 10 8.225 -60.622 -14.698 1.00 -0.79 \ ATOM 55 CB ILE Y 10 9.706 -57.887 -13.720 1.00 -0.79 \ ATOM 56 CG1 ILE Y 10 9.704 -56.722 -12.712 1.00 -0.79 \ ATOM 57 CG2 ILE Y 10 10.572 -57.540 -14.928 1.00 -0.79 \ ATOM 58 CD1 ILE Y 10 9.226 -55.380 -13.232 1.00 -0.79 \ ATOM 59 N CYS Y 11 8.391 -59.126 -16.383 1.00 1.70 \ ATOM 60 CA CYS Y 11 8.188 -60.082 -17.469 1.00 1.70 \ ATOM 61 C CYS Y 11 9.046 -59.674 -18.648 1.00 1.70 \ ATOM 62 O CYS Y 11 8.900 -58.580 -19.161 1.00 1.70 \ ATOM 63 CB CYS Y 11 6.701 -60.061 -17.806 1.00 1.70 \ ATOM 64 SG CYS Y 11 6.061 -60.217 -19.486 1.00 1.70 \ ATOM 65 N SER Y 12 9.976 -60.536 -19.039 1.00 -0.16 \ ATOM 66 CA SER Y 12 10.815 -60.268 -20.204 1.00 -0.16 \ ATOM 67 C SER Y 12 9.954 -60.361 -21.468 1.00 -0.16 \ ATOM 68 O SER Y 12 8.942 -61.075 -21.482 1.00 -0.16 \ ATOM 69 CB SER Y 12 11.942 -61.293 -20.273 1.00 -0.16 \ ATOM 70 OG SER Y 12 11.404 -62.599 -20.459 1.00 -0.16 \ ATOM 71 N LEU Y 13 10.351 -59.661 -22.534 1.00 -0.38 \ ATOM 72 CA LEU Y 13 9.722 -59.872 -23.858 1.00 -0.38 \ ATOM 73 C LEU Y 13 9.883 -61.322 -24.313 1.00 -0.38 \ ATOM 74 O LEU Y 13 9.025 -61.872 -25.055 1.00 -0.38 \ ATOM 75 CB LEU Y 13 10.276 -58.912 -24.922 1.00 -0.38 \ ATOM 76 CG LEU Y 13 9.861 -57.436 -24.794 1.00 -0.38 \ ATOM 77 CD1 LEU Y 13 10.500 -56.601 -25.897 1.00 -0.38 \ ATOM 78 CD2 LEU Y 13 8.341 -57.288 -24.827 1.00 -0.38 \ ATOM 79 N TYR Y 14 10.947 -61.960 -23.828 1.00 -1.24 \ ATOM 80 CA TYR Y 14 11.193 -63.368 -24.144 1.00 -1.24 \ ATOM 81 C TYR Y 14 10.037 -64.215 -23.591 1.00 -1.24 \ ATOM 82 O TYR Y 14 9.384 -64.934 -24.360 1.00 -1.24 \ ATOM 83 CB TYR Y 14 12.581 -63.786 -23.676 1.00 -1.24 \ ATOM 84 CG TYR Y 14 13.656 -62.942 -24.339 1.00 -1.24 \ ATOM 85 CD1 TYR Y 14 14.111 -63.248 -25.623 1.00 -1.24 \ ATOM 86 CD2 TYR Y 14 14.186 -61.816 -23.709 1.00 -1.24 \ ATOM 87 CE1 TYR Y 14 15.085 -62.480 -26.244 1.00 -1.24 \ ATOM 88 CE2 TYR Y 14 15.164 -61.043 -24.322 1.00 -1.24 \ ATOM 89 CZ TYR Y 14 15.612 -61.379 -25.597 1.00 -1.24 \ ATOM 90 OH TYR Y 14 16.587 -60.620 -26.235 1.00 -1.24 \ ATOM 91 N GLN Y 15 9.680 -64.019 -22.323 1.00 -0.57 \ ATOM 92 CA GLN Y 15 8.497 -64.685 -21.746 1.00 -0.57 \ ATOM 93 C GLN Y 15 7.239 -64.520 -22.626 1.00 -0.57 \ ATOM 94 O GLN Y 15 6.530 -65.490 -22.844 1.00 -0.57 \ ATOM 95 CB GLN Y 15 8.218 -64.224 -20.320 1.00 -0.57 \ ATOM 96 N LEU Y 16 7.000 -63.331 -23.180 1.00 0.77 \ ATOM 97 CA LEU Y 16 5.777 -63.095 -23.970 1.00 0.77 \ ATOM 98 C LEU Y 16 5.740 -63.851 -25.306 1.00 0.77 \ ATOM 99 O LEU Y 16 4.662 -64.069 -25.847 1.00 0.77 \ ATOM 100 CB LEU Y 16 5.589 -61.609 -24.268 1.00 0.77 \ ATOM 101 CG LEU Y 16 5.413 -60.670 -23.088 1.00 0.77 \ ATOM 102 CD1 LEU Y 16 5.796 -59.259 -23.509 1.00 0.77 \ ATOM 103 CD2 LEU Y 16 3.976 -60.733 -22.558 1.00 0.77 \ ATOM 104 N GLU Y 17 6.900 -64.214 -25.852 1.00 0.32 \ ATOM 105 CA GLU Y 17 6.963 -65.046 -27.070 1.00 0.32 \ ATOM 106 C GLU Y 17 6.228 -66.370 -26.875 1.00 0.32 \ ATOM 107 O GLU Y 17 5.674 -66.916 -27.831 1.00 0.32 \ ATOM 108 CB GLU Y 17 8.411 -65.249 -27.566 1.00 0.32 \ ATOM 109 CG GLU Y 17 8.524 -66.048 -28.877 1.00 0.32 \ ATOM 110 CD GLU Y 17 9.475 -65.465 -29.922 1.00 0.32 \ ATOM 111 OE1 GLU Y 17 10.047 -64.367 -29.720 1.00 0.32 \ ATOM 112 OE2 GLU Y 17 9.619 -66.112 -30.994 1.00 0.32 \ ATOM 113 N ASN Y 18 6.170 -66.843 -25.629 1.00 -0.96 \ ATOM 114 CA ASN Y 18 5.295 -67.974 -25.242 1.00 -0.96 \ ATOM 115 C ASN Y 18 3.848 -67.829 -25.656 1.00 -0.96 \ ATOM 116 O ASN Y 18 3.225 -68.803 -26.087 1.00 -0.96 \ ATOM 117 CB ASN Y 18 5.274 -68.194 -23.730 1.00 -0.96 \ ATOM 118 CG ASN Y 18 6.642 -68.494 -23.152 1.00 -0.96 \ ATOM 119 OD1 ASN Y 18 7.416 -69.265 -23.719 1.00 -0.96 \ ATOM 120 ND2 ASN Y 18 6.949 -67.878 -22.009 1.00 -0.96 \ ATOM 121 N TYR Y 19 3.300 -66.627 -25.507 1.00 1.17 \ ATOM 122 CA TYR Y 19 1.885 -66.409 -25.812 1.00 1.17 \ ATOM 123 C TYR Y 19 1.560 -66.310 -27.314 1.00 1.17 \ ATOM 124 O TYR Y 19 0.394 -66.263 -27.668 1.00 1.17 \ ATOM 125 CB TYR Y 19 1.393 -65.179 -25.061 1.00 1.17 \ ATOM 126 CG TYR Y 19 1.504 -65.367 -23.567 1.00 1.17 \ ATOM 127 CD1 TYR Y 19 0.510 -66.027 -22.852 1.00 1.17 \ ATOM 128 CD2 TYR Y 19 2.618 -64.912 -22.880 1.00 1.17 \ ATOM 129 CE1 TYR Y 19 0.623 -66.213 -21.477 1.00 1.17 \ ATOM 130 CE2 TYR Y 19 2.741 -65.083 -21.523 1.00 1.17 \ ATOM 131 CZ TYR Y 19 1.746 -65.736 -20.826 1.00 1.17 \ ATOM 132 OH TYR Y 19 1.905 -65.892 -19.488 1.00 1.17 \ ATOM 133 N CYS Y 20 2.567 -66.290 -28.187 1.00 1.70 \ ATOM 134 CA CYS Y 20 2.340 -66.216 -29.645 1.00 1.70 \ ATOM 135 C CYS Y 20 1.688 -67.442 -30.283 1.00 1.70 \ ATOM 136 O CYS Y 20 1.323 -68.387 -29.606 1.00 1.70 \ ATOM 137 CB CYS Y 20 3.652 -65.945 -30.380 1.00 1.70 \ ATOM 138 SG CYS Y 20 4.587 -64.524 -29.823 1.00 1.70 \ ATOM 139 N ASN Y 21 1.509 -67.362 -31.602 1.00 0.17 \ ATOM 140 CA ASN Y 21 0.983 -68.427 -32.453 1.00 0.17 \ ATOM 141 C ASN Y 21 -0.541 -68.484 -32.311 1.00 0.17 \ ATOM 142 O ASN Y 21 -1.159 -67.781 -31.507 1.00 0.17 \ ATOM 143 CB ASN Y 21 1.656 -69.777 -32.170 1.00 0.17 \ ATOM 144 OXT ASN Y 21 -1.208 -69.228 -33.025 1.00 0.17 \ """, "e5mt3Y1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt3Y1_csv", state=0, origin=1) cmd.zoom("e5mt3Y1_csv", animate=-1)