cmd.read_pdbstr("""\ ATOM 1 N PHE b 1 2.926 -56.879 -45.520 1.00 -1.00 \ ATOM 2 CA PHE b 1 2.508 -55.467 -45.802 1.00 -1.00 \ ATOM 3 C PHE b 1 2.561 -54.584 -44.525 1.00 -1.00 \ ATOM 4 O PHE b 1 1.869 -54.865 -43.504 1.00 -1.00 \ ATOM 5 CB PHE b 1 1.097 -55.428 -46.452 1.00 -1.00 \ ATOM 6 CG PHE b 1 1.064 -55.989 -47.836 1.00 -1.00 \ ATOM 7 CD1 PHE b 1 1.464 -55.219 -48.915 1.00 -1.00 \ ATOM 8 CD2 PHE b 1 0.681 -57.323 -48.064 1.00 -1.00 \ ATOM 9 CE1 PHE b 1 1.453 -55.751 -50.208 1.00 -1.00 \ ATOM 10 CE2 PHE b 1 0.662 -57.858 -49.350 1.00 -1.00 \ ATOM 11 CZ PHE b 1 1.045 -57.070 -50.423 1.00 -1.00 \ ATOM 12 N VAL b 2 3.388 -53.540 -44.602 1.00 -1.00 \ ATOM 13 CA VAL b 2 3.666 -52.634 -43.485 1.00 -1.00 \ ATOM 14 C VAL b 2 2.395 -51.937 -43.077 1.00 -1.00 \ ATOM 15 O VAL b 2 2.095 -51.917 -41.899 1.00 -1.00 \ ATOM 16 CB VAL b 2 4.791 -51.615 -43.822 1.00 -1.00 \ ATOM 17 CG1 VAL b 2 4.934 -50.515 -42.772 1.00 -1.00 \ ATOM 18 CG2 VAL b 2 6.127 -52.357 -43.927 1.00 -1.00 \ ATOM 19 N ASN b 3 1.635 -51.425 -44.049 1.00 -0.47 \ ATOM 20 CA ASN b 3 0.407 -50.697 -43.752 1.00 -0.47 \ ATOM 21 C ASN b 3 -0.555 -51.575 -42.972 1.00 -0.47 \ ATOM 22 O ASN b 3 -1.236 -51.072 -42.091 1.00 -0.47 \ ATOM 23 CB ASN b 3 -0.276 -50.158 -45.024 1.00 -0.47 \ ATOM 24 CG ASN b 3 0.285 -48.816 -45.455 1.00 -0.47 \ ATOM 25 OD1 ASN b 3 0.510 -47.939 -44.600 1.00 -0.47 \ ATOM 26 N GLN b 4 -0.613 -52.870 -43.287 1.00 0.22 \ ATOM 27 CA GLN b 4 -1.496 -53.767 -42.541 1.00 0.22 \ ATOM 28 C GLN b 4 -0.944 -54.114 -41.124 1.00 0.22 \ ATOM 29 O GLN b 4 -1.710 -54.310 -40.167 1.00 0.22 \ ATOM 30 CB GLN b 4 -1.961 -54.961 -43.410 1.00 0.22 \ ATOM 31 CG GLN b 4 -1.103 -56.203 -43.499 1.00 0.22 \ ATOM 32 CD GLN b 4 -1.663 -57.281 -44.466 1.00 0.22 \ ATOM 33 OE1 GLN b 4 -1.262 -58.449 -44.381 1.00 0.22 \ ATOM 34 NE2 GLN b 4 -2.548 -56.882 -45.409 1.00 0.22 \ ATOM 35 N HIS b 5 0.375 -54.123 -40.987 1.00 -0.04 \ ATOM 36 CA HIS b 5 0.981 -54.364 -39.693 1.00 -0.04 \ ATOM 37 C HIS b 5 0.693 -53.160 -38.740 1.00 -0.04 \ ATOM 38 O HIS b 5 0.224 -53.362 -37.566 1.00 -0.04 \ ATOM 39 CB HIS b 5 2.512 -54.624 -39.874 1.00 -0.04 \ ATOM 40 CG HIS b 5 3.151 -55.226 -38.679 1.00 -0.04 \ ATOM 41 ND1 HIS b 5 2.960 -56.544 -38.316 1.00 -0.04 \ ATOM 42 CD2 HIS b 5 3.948 -54.681 -37.729 1.00 -0.04 \ ATOM 43 CE1 HIS b 5 3.626 -56.788 -37.198 1.00 -0.04 \ ATOM 44 NE2 HIS b 5 4.217 -55.668 -36.814 1.00 -0.04 \ ATOM 45 N LEU b 6 0.925 -51.951 -39.255 1.00 1.15 \ ATOM 46 CA LEU b 6 0.569 -50.736 -38.568 1.00 1.15 \ ATOM 47 C LEU b 6 -0.908 -50.733 -38.179 1.00 1.15 \ ATOM 48 O LEU b 6 -1.249 -50.524 -37.005 1.00 1.15 \ ATOM 49 CB LEU b 6 0.936 -49.477 -39.373 1.00 1.15 \ ATOM 50 CG LEU b 6 2.422 -49.311 -39.657 1.00 1.15 \ ATOM 51 CD1 LEU b 6 2.754 -47.982 -40.253 1.00 1.15 \ ATOM 52 CD2 LEU b 6 3.281 -49.518 -38.409 1.00 1.15 \ ATOM 53 N CYS b 7 -1.774 -51.008 -39.140 1.00 1.70 \ ATOM 54 CA CYS b 7 -3.197 -51.131 -38.873 1.00 1.70 \ ATOM 55 C CYS b 7 -3.510 -52.132 -37.741 1.00 1.70 \ ATOM 56 O CYS b 7 -4.330 -51.859 -36.820 1.00 1.70 \ ATOM 57 CB CYS b 7 -3.950 -51.488 -40.158 1.00 1.70 \ ATOM 58 SG CYS b 7 -5.746 -51.624 -39.968 1.00 1.70 \ ATOM 59 N GLY b 8 -2.828 -53.266 -37.799 1.00 0.71 \ ATOM 60 CA GLY b 8 -2.977 -54.335 -36.822 1.00 0.71 \ ATOM 61 C GLY b 8 -2.789 -53.853 -35.394 1.00 0.71 \ ATOM 62 O GLY b 8 -3.543 -54.244 -34.460 1.00 0.71 \ ATOM 63 N SER b 9 -1.795 -52.968 -35.260 1.00 -0.48 \ ATOM 64 CA SER b 9 -1.405 -52.435 -34.003 1.00 -0.48 \ ATOM 65 C SER b 9 -2.557 -51.628 -33.430 1.00 -0.48 \ ATOM 66 O SER b 9 -2.883 -51.754 -32.245 1.00 -0.48 \ ATOM 67 CB SER b 9 -0.077 -51.692 -34.127 1.00 -0.48 \ ATOM 68 OG SER b 9 0.116 -50.922 -32.993 1.00 -0.48 \ ATOM 69 N HIS b 10 -3.217 -50.856 -34.270 1.00 -0.23 \ ATOM 70 CA HIS b 10 -4.416 -50.154 -33.852 1.00 -0.23 \ ATOM 71 C HIS b 10 -5.569 -51.120 -33.537 1.00 -0.23 \ ATOM 72 O HIS b 10 -6.347 -50.900 -32.619 1.00 -0.23 \ ATOM 73 CB HIS b 10 -4.820 -49.111 -34.912 1.00 -0.23 \ ATOM 74 CG HIS b 10 -3.824 -48.010 -35.072 1.00 -0.23 \ ATOM 75 ND1 HIS b 10 -3.930 -46.817 -34.397 1.00 -0.23 \ ATOM 76 CD2 HIS b 10 -2.689 -47.929 -35.804 1.00 -0.23 \ ATOM 77 CE1 HIS b 10 -2.891 -46.058 -34.701 1.00 -0.23 \ ATOM 78 NE2 HIS b 10 -2.124 -46.712 -35.556 1.00 -0.23 \ ATOM 79 N LEU b 11 -5.751 -52.126 -34.345 1.00 1.70 \ ATOM 80 CA LEU b 11 -6.787 -53.150 -34.074 1.00 1.70 \ ATOM 81 C LEU b 11 -6.721 -53.825 -32.726 1.00 1.70 \ ATOM 82 O LEU b 11 -7.780 -53.968 -32.075 1.00 1.70 \ ATOM 83 CB LEU b 11 -6.804 -54.225 -35.158 1.00 1.70 \ ATOM 84 CG LEU b 11 -7.265 -53.801 -36.559 1.00 1.70 \ ATOM 85 CD1 LEU b 11 -7.254 -55.001 -37.529 1.00 1.70 \ ATOM 86 CD2 LEU b 11 -8.603 -53.101 -36.592 1.00 1.70 \ ATOM 87 N VAL b 12 -5.519 -54.217 -32.276 1.00 0.71 \ ATOM 88 CA VAL b 12 -5.406 -54.907 -31.000 1.00 0.71 \ ATOM 89 C VAL b 12 -5.683 -54.023 -29.773 1.00 0.71 \ ATOM 90 O VAL b 12 -6.310 -54.501 -28.814 1.00 0.71 \ ATOM 91 CB VAL b 12 -4.182 -55.790 -30.861 1.00 0.71 \ ATOM 92 CG1 VAL b 12 -4.250 -56.885 -31.903 1.00 0.71 \ ATOM 93 CG2 VAL b 12 -2.816 -55.049 -30.870 1.00 0.71 \ ATOM 94 N GLU b 13 -5.360 -52.726 -29.875 1.00 0.66 \ ATOM 95 CA GLU b 13 -5.730 -51.709 -28.861 1.00 0.66 \ ATOM 96 C GLU b 13 -7.227 -51.511 -28.855 1.00 0.66 \ ATOM 97 O GLU b 13 -7.790 -51.327 -27.797 1.00 0.66 \ ATOM 98 CB GLU b 13 -5.105 -50.321 -29.118 1.00 0.66 \ ATOM 99 CG GLU b 13 -3.755 -50.027 -28.470 1.00 0.66 \ ATOM 100 CD GLU b 13 -3.720 -48.652 -27.744 1.00 0.66 \ ATOM 101 OE1 GLU b 13 -3.668 -47.579 -28.402 1.00 0.66 \ ATOM 102 OE2 GLU b 13 -3.759 -48.647 -26.489 1.00 0.66 \ ATOM 103 N ALA b 14 -7.854 -51.522 -30.038 1.00 -0.00 \ ATOM 104 CA ALA b 14 -9.320 -51.408 -30.117 1.00 -0.00 \ ATOM 105 C ALA b 14 -10.031 -52.642 -29.513 1.00 -0.00 \ ATOM 106 O ALA b 14 -10.956 -52.507 -28.710 1.00 -0.00 \ ATOM 107 CB ALA b 14 -9.785 -51.089 -31.558 1.00 -0.00 \ ATOM 108 N LEU b 15 -9.577 -53.827 -29.863 1.00 1.70 \ ATOM 109 CA LEU b 15 -10.064 -55.070 -29.245 1.00 1.70 \ ATOM 110 C LEU b 15 -9.861 -55.137 -27.713 1.00 1.70 \ ATOM 111 O LEU b 15 -10.735 -55.706 -26.997 1.00 1.70 \ ATOM 112 CB LEU b 15 -9.403 -56.317 -29.887 1.00 1.70 \ ATOM 113 CG LEU b 15 -9.703 -56.564 -31.415 1.00 1.70 \ ATOM 114 CD1 LEU b 15 -9.174 -57.902 -31.867 1.00 1.70 \ ATOM 115 CD2 LEU b 15 -11.175 -56.525 -31.777 1.00 1.70 \ ATOM 116 N TYR b 16 -8.754 -54.573 -27.221 1.00 -0.22 \ ATOM 117 CA TYR b 16 -8.457 -54.559 -25.790 1.00 -0.22 \ ATOM 118 C TYR b 16 -9.591 -53.898 -25.029 1.00 -0.22 \ ATOM 119 O TYR b 16 -10.056 -54.441 -24.021 1.00 -0.22 \ ATOM 120 CB TYR b 16 -7.076 -53.885 -25.464 1.00 -0.22 \ ATOM 121 CG TYR b 16 -6.902 -53.473 -23.975 1.00 -0.22 \ ATOM 122 CD1 TYR b 16 -6.533 -54.391 -22.986 1.00 -0.22 \ ATOM 123 CD2 TYR b 16 -7.158 -52.157 -23.575 1.00 -0.22 \ ATOM 124 CE1 TYR b 16 -6.395 -53.995 -21.642 1.00 -0.22 \ ATOM 125 CE2 TYR b 16 -7.032 -51.755 -22.250 1.00 -0.22 \ ATOM 126 CZ TYR b 16 -6.663 -52.689 -21.283 1.00 -0.22 \ ATOM 127 OH TYR b 16 -6.571 -52.255 -19.986 1.00 -0.22 \ ATOM 128 N LEU b 17 -10.023 -52.739 -25.528 1.00 -0.23 \ ATOM 129 CA LEU b 17 -11.050 -51.941 -24.913 1.00 -0.23 \ ATOM 130 C LEU b 17 -12.450 -52.471 -25.222 1.00 -0.23 \ ATOM 131 O LEU b 17 -13.325 -52.449 -24.355 1.00 -0.23 \ ATOM 132 CB LEU b 17 -10.960 -50.493 -25.378 1.00 -0.23 \ ATOM 133 CG LEU b 17 -9.846 -49.635 -24.752 1.00 -0.23 \ ATOM 134 CD1 LEU b 17 -9.776 -48.282 -25.421 1.00 -0.23 \ ATOM 135 CD2 LEU b 17 -10.059 -49.457 -23.251 1.00 -0.23 \ ATOM 136 N VAL b 18 -12.668 -52.904 -26.456 1.00 0.28 \ ATOM 137 CA VAL b 18 -13.974 -53.406 -26.854 1.00 0.28 \ ATOM 138 C VAL b 18 -14.352 -54.642 -26.069 1.00 0.28 \ ATOM 139 O VAL b 18 -15.467 -54.699 -25.526 1.00 0.28 \ ATOM 140 CB VAL b 18 -14.058 -53.655 -28.368 1.00 0.28 \ ATOM 141 CG1 VAL b 18 -15.232 -54.579 -28.736 1.00 0.28 \ ATOM 142 CG2 VAL b 18 -14.233 -52.308 -29.067 1.00 0.28 \ ATOM 143 N CYS b 19 -13.412 -55.588 -25.993 1.00 1.70 \ ATOM 144 CA CYS b 19 -13.684 -56.907 -25.483 1.00 1.70 \ ATOM 145 C CYS b 19 -13.683 -56.955 -23.952 1.00 1.70 \ ATOM 146 O CYS b 19 -14.345 -57.805 -23.384 1.00 1.70 \ ATOM 147 CB CYS b 19 -12.679 -57.928 -26.068 1.00 1.70 \ ATOM 148 SG CYS b 19 -12.659 -58.111 -27.883 1.00 1.70 \ ATOM 149 N GLY b 20 -12.926 -56.069 -23.301 1.00 -0.16 \ ATOM 150 CA GLY b 20 -12.813 -56.025 -21.838 1.00 -0.16 \ ATOM 151 C GLY b 20 -12.347 -57.326 -21.222 1.00 -0.16 \ ATOM 152 O GLY b 20 -11.278 -57.834 -21.574 1.00 -0.16 \ ATOM 153 N GLU b 21 -13.171 -57.880 -20.325 1.00 0.19 \ ATOM 154 CA GLU b 21 -12.785 -59.067 -19.552 1.00 0.19 \ ATOM 155 C GLU b 21 -12.711 -60.323 -20.432 1.00 0.19 \ ATOM 156 O GLU b 21 -11.842 -61.172 -20.224 1.00 0.19 \ ATOM 157 CB GLU b 21 -13.732 -59.285 -18.355 1.00 0.19 \ ATOM 158 N ARG b 22 -13.581 -60.401 -21.437 1.00 -0.61 \ ATOM 159 CA ARG b 22 -13.569 -61.476 -22.445 1.00 -0.61 \ ATOM 160 C ARG b 22 -12.212 -61.752 -23.090 1.00 -0.61 \ ATOM 161 O ARG b 22 -11.965 -62.865 -23.539 1.00 -0.61 \ ATOM 162 CB ARG b 22 -14.547 -61.158 -23.599 1.00 -0.61 \ ATOM 163 CG ARG b 22 -16.036 -61.316 -23.283 1.00 -0.61 \ ATOM 164 CD ARG b 22 -16.914 -60.979 -24.493 1.00 -0.61 \ ATOM 165 NE ARG b 22 -17.093 -59.528 -24.676 1.00 -0.61 \ ATOM 166 CZ ARG b 22 -17.707 -58.945 -25.713 1.00 -0.61 \ ATOM 167 NH1 ARG b 22 -18.225 -59.676 -26.702 1.00 -0.61 \ ATOM 168 NH2 ARG b 22 -17.793 -57.611 -25.767 1.00 -0.61 \ ATOM 169 N GLY b 23 -11.370 -60.732 -23.229 1.00 1.70 \ ATOM 170 CA GLY b 23 -10.110 -60.920 -23.935 1.00 1.70 \ ATOM 171 C GLY b 23 -10.421 -61.162 -25.400 1.00 1.70 \ ATOM 172 O GLY b 23 -11.538 -60.926 -25.822 1.00 1.70 \ ATOM 173 N PHE b 24 -9.449 -61.623 -26.191 1.00 1.13 \ ATOM 174 CA PHE b 24 -9.666 -61.745 -27.629 1.00 1.13 \ ATOM 175 C PHE b 24 -8.614 -62.598 -28.274 1.00 1.13 \ ATOM 176 O PHE b 24 -7.549 -62.744 -27.718 1.00 1.13 \ ATOM 177 CB PHE b 24 -9.694 -60.351 -28.286 1.00 1.13 \ ATOM 178 CG PHE b 24 -8.418 -59.588 -28.149 1.00 1.13 \ ATOM 179 CD1 PHE b 24 -7.362 -59.792 -29.042 1.00 1.13 \ ATOM 180 CD2 PHE b 24 -8.251 -58.677 -27.127 1.00 1.13 \ ATOM 181 CE1 PHE b 24 -6.189 -59.071 -28.925 1.00 1.13 \ ATOM 182 CE2 PHE b 24 -7.055 -57.967 -27.009 1.00 1.13 \ ATOM 183 CZ PHE b 24 -6.038 -58.173 -27.902 1.00 1.13 \ ATOM 184 N PHE b 25 -8.921 -63.170 -29.442 1.00 0.52 \ ATOM 185 CA PHE b 25 -7.899 -63.860 -30.247 1.00 0.52 \ ATOM 186 C PHE b 25 -7.580 -62.921 -31.394 1.00 0.52 \ ATOM 187 O PHE b 25 -8.468 -62.377 -32.063 1.00 0.52 \ ATOM 188 CB PHE b 25 -8.291 -65.298 -30.722 1.00 0.52 \ ATOM 189 CG PHE b 25 -7.313 -66.385 -30.241 1.00 0.52 \ ATOM 190 CD1 PHE b 25 -6.016 -66.478 -30.769 1.00 0.52 \ ATOM 191 CD2 PHE b 25 -7.656 -67.266 -29.200 1.00 0.52 \ ATOM 192 CE1 PHE b 25 -5.102 -67.432 -30.293 1.00 0.52 \ ATOM 193 CE2 PHE b 25 -6.743 -68.227 -28.725 1.00 0.52 \ ATOM 194 CZ PHE b 25 -5.463 -68.306 -29.270 1.00 0.52 \ ATOM 195 N TYR b 26 -6.301 -62.663 -31.558 1.00 -0.24 \ ATOM 196 CA TYR b 26 -5.843 -61.868 -32.644 1.00 -0.24 \ ATOM 197 C TYR b 26 -5.230 -62.829 -33.630 1.00 -0.24 \ ATOM 198 O TYR b 26 -4.267 -63.489 -33.261 1.00 -0.24 \ ATOM 199 CB TYR b 26 -4.811 -60.838 -32.200 1.00 -0.24 \ ATOM 200 CG TYR b 26 -4.351 -60.048 -33.372 1.00 -0.24 \ ATOM 201 CD1 TYR b 26 -5.265 -59.303 -34.123 1.00 -0.24 \ ATOM 202 CD2 TYR b 26 -3.034 -60.079 -33.774 1.00 -0.24 \ ATOM 203 CE1 TYR b 26 -4.860 -58.576 -35.212 1.00 -0.24 \ ATOM 204 CE2 TYR b 26 -2.634 -59.385 -34.876 1.00 -0.24 \ ATOM 205 CZ TYR b 26 -3.533 -58.638 -35.587 1.00 -0.24 \ ATOM 206 OH TYR b 26 -3.103 -57.926 -36.647 1.00 -0.24 \ ATOM 207 N THR b 27 -5.793 -62.898 -34.856 1.00 -0.98 \ ATOM 208 CA THR b 27 -5.235 -63.760 -35.912 1.00 -0.98 \ ATOM 209 C THR b 27 -5.076 -62.977 -37.252 1.00 -0.98 \ ATOM 210 O THR b 27 -6.063 -62.681 -37.921 1.00 -0.98 \ ATOM 211 CB THR b 27 -6.072 -65.046 -36.113 1.00 -0.98 \ ATOM 212 OG1 THR b 27 -7.289 -64.746 -36.816 1.00 -0.98 \ ATOM 213 CG2 THR b 27 -6.417 -65.705 -34.755 1.00 -0.98 \ ATOM 214 N PRO b 28 -3.836 -62.608 -37.623 1.00 -0.79 \ ATOM 215 CA PRO b 28 -3.604 -61.988 -38.939 1.00 -0.79 \ ATOM 216 C PRO b 28 -3.620 -63.013 -40.111 1.00 -0.79 \ ATOM 217 O PRO b 28 -2.649 -63.762 -40.312 1.00 -0.79 \ ATOM 218 CB PRO b 28 -2.228 -61.343 -38.768 1.00 -0.79 \ ATOM 219 CG PRO b 28 -1.535 -62.200 -37.772 1.00 -0.79 \ ATOM 220 CD PRO b 28 -2.601 -62.653 -36.819 1.00 -0.79 \ ATOM 221 N LYS b 29 -4.718 -63.023 -40.870 1.00 -0.90 \ ATOM 222 CA LYS b 29 -4.982 -64.017 -41.933 1.00 -0.90 \ ATOM 223 C LYS b 29 -5.287 -65.397 -41.332 1.00 -0.90 \ ATOM 224 O LYS b 29 -6.421 -65.873 -41.432 1.00 -0.90 \ ATOM 225 CB LYS b 29 -3.832 -64.084 -42.959 1.00 -0.90 \ """, "e5mt3d1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt3d1_csv", state=0, origin=1) cmd.zoom("e5mt3d1_csv", animate=-1)