cmd.read_pdbstr("""\ ATOM 1 N VAL f 2 5.049 -6.646 -18.401 1.00 -1.00 \ ATOM 2 CA VAL f 2 3.671 -6.981 -18.910 1.00 -1.00 \ ATOM 3 C VAL f 2 2.631 -6.090 -18.234 1.00 -1.00 \ ATOM 4 O VAL f 2 2.665 -5.889 -17.013 1.00 -1.00 \ ATOM 5 CB VAL f 2 3.242 -8.482 -18.748 1.00 -1.00 \ ATOM 6 N ASN f 3 1.731 -5.559 -19.053 1.00 -0.47 \ ATOM 7 CA ASN f 3 0.612 -4.735 -18.597 1.00 -0.47 \ ATOM 8 C ASN f 3 -0.352 -5.641 -17.875 1.00 -0.47 \ ATOM 9 O ASN f 3 -1.024 -5.213 -16.949 1.00 -0.47 \ ATOM 10 CB ASN f 3 -0.139 -4.107 -19.762 1.00 -0.47 \ ATOM 11 CG ASN f 3 0.543 -2.873 -20.299 1.00 -0.47 \ ATOM 12 OD1 ASN f 3 0.796 -1.890 -19.566 1.00 -0.47 \ ATOM 13 ND2 ASN f 3 0.829 -2.897 -21.593 1.00 -0.47 \ ATOM 14 N GLN f 4 -0.421 -6.890 -18.342 1.00 0.22 \ ATOM 15 CA GLN f 4 -1.169 -7.940 -17.670 1.00 0.22 \ ATOM 16 C GLN f 4 -0.703 -8.144 -16.211 1.00 0.22 \ ATOM 17 O GLN f 4 -1.507 -8.210 -15.270 1.00 0.22 \ ATOM 18 CB GLN f 4 -0.984 -9.226 -18.451 1.00 0.22 \ ATOM 19 CG GLN f 4 -1.827 -10.378 -17.962 1.00 0.22 \ ATOM 20 CD GLN f 4 -1.858 -11.546 -18.937 1.00 0.22 \ ATOM 21 OE1 GLN f 4 -1.389 -12.646 -18.609 1.00 0.22 \ ATOM 22 NE2 GLN f 4 -2.388 -11.309 -20.153 1.00 0.22 \ ATOM 23 N HIS f 5 0.605 -8.260 -16.042 1.00 -0.04 \ ATOM 24 CA HIS f 5 1.185 -8.520 -14.735 1.00 -0.04 \ ATOM 25 C HIS f 5 0.920 -7.356 -13.764 1.00 -0.04 \ ATOM 26 O HIS f 5 0.416 -7.558 -12.637 1.00 -0.04 \ ATOM 27 CB HIS f 5 2.687 -8.800 -14.876 1.00 -0.04 \ ATOM 28 CG HIS f 5 3.310 -9.401 -13.641 1.00 -0.04 \ ATOM 29 ND1 HIS f 5 3.095 -10.711 -13.252 1.00 -0.04 \ ATOM 30 CD2 HIS f 5 4.140 -8.870 -12.715 1.00 -0.04 \ ATOM 31 CE1 HIS f 5 3.770 -10.955 -12.141 1.00 -0.04 \ ATOM 32 NE2 HIS f 5 4.422 -9.857 -11.802 1.00 -0.04 \ ATOM 33 N LEU f 6 1.180 -6.135 -14.229 1.00 1.15 \ ATOM 34 CA LEU f 6 0.908 -4.927 -13.460 1.00 1.15 \ ATOM 35 C LEU f 6 -0.575 -4.865 -13.117 1.00 1.15 \ ATOM 36 O LEU f 6 -0.947 -4.571 -11.983 1.00 1.15 \ ATOM 37 CB LEU f 6 1.345 -3.669 -14.205 1.00 1.15 \ ATOM 38 CG LEU f 6 2.821 -3.571 -14.547 1.00 1.15 \ ATOM 39 CD1 LEU f 6 3.055 -2.262 -15.301 1.00 1.15 \ ATOM 40 CD2 LEU f 6 3.717 -3.731 -13.293 1.00 1.15 \ ATOM 41 N CYS f 7 -1.433 -5.190 -14.073 1.00 1.70 \ ATOM 42 CA CYS f 7 -2.868 -5.225 -13.840 1.00 1.70 \ ATOM 43 C CYS f 7 -3.186 -6.232 -12.767 1.00 1.70 \ ATOM 44 O CYS f 7 -3.965 -5.928 -11.823 1.00 1.70 \ ATOM 45 CB CYS f 7 -3.628 -5.536 -15.150 1.00 1.70 \ ATOM 46 SG CYS f 7 -5.417 -5.731 -14.978 1.00 1.70 \ ATOM 47 N GLY f 8 -2.584 -7.425 -12.890 1.00 0.71 \ ATOM 48 CA GLY f 8 -2.776 -8.518 -11.899 1.00 0.71 \ ATOM 49 C GLY f 8 -2.559 -8.015 -10.493 1.00 0.71 \ ATOM 50 O GLY f 8 -3.384 -8.245 -9.565 1.00 0.71 \ ATOM 51 N SER f 9 -1.504 -7.222 -10.347 1.00 -0.48 \ ATOM 52 CA SER f 9 -1.160 -6.667 -9.038 1.00 -0.48 \ ATOM 53 C SER f 9 -2.280 -5.805 -8.456 1.00 -0.48 \ ATOM 54 O SER f 9 -2.626 -5.942 -7.277 1.00 -0.48 \ ATOM 55 CB SER f 9 0.192 -5.994 -9.125 1.00 -0.48 \ ATOM 56 OG SER f 9 0.265 -4.986 -8.258 1.00 -0.48 \ ATOM 57 N HIS f 10 -2.918 -4.996 -9.299 1.00 -0.23 \ ATOM 58 CA HIS f 10 -4.057 -4.180 -8.903 1.00 -0.23 \ ATOM 59 C HIS f 10 -5.302 -5.028 -8.669 1.00 -0.23 \ ATOM 60 O HIS f 10 -6.122 -4.688 -7.834 1.00 -0.23 \ ATOM 61 CB HIS f 10 -4.386 -3.123 -9.986 1.00 -0.23 \ ATOM 62 CG HIS f 10 -3.371 -2.028 -10.090 1.00 -0.23 \ ATOM 63 ND1 HIS f 10 -3.412 -0.915 -9.282 1.00 -0.23 \ ATOM 64 CD2 HIS f 10 -2.328 -1.858 -10.918 1.00 -0.23 \ ATOM 65 CE1 HIS f 10 -2.380 -0.145 -9.572 1.00 -0.23 \ ATOM 66 NE2 HIS f 10 -1.718 -0.690 -10.575 1.00 -0.23 \ ATOM 67 N LEU f 11 -5.519 -6.041 -9.479 1.00 1.70 \ ATOM 68 CA LEU f 11 -6.678 -6.955 -9.260 1.00 1.70 \ ATOM 69 C LEU f 11 -6.677 -7.658 -7.891 1.00 1.70 \ ATOM 70 O LEU f 11 -7.751 -7.732 -7.261 1.00 1.70 \ ATOM 71 CB LEU f 11 -6.789 -8.003 -10.383 1.00 1.70 \ ATOM 72 CG LEU f 11 -7.256 -7.477 -11.747 1.00 1.70 \ ATOM 73 CD1 LEU f 11 -7.081 -8.574 -12.767 1.00 1.70 \ ATOM 74 CD2 LEU f 11 -8.713 -6.950 -11.776 1.00 1.70 \ ATOM 75 N VAL f 12 -5.501 -8.109 -7.405 1.00 0.71 \ ATOM 76 CA VAL f 12 -5.438 -8.824 -6.158 1.00 0.71 \ ATOM 77 C VAL f 12 -5.654 -7.948 -4.920 1.00 0.71 \ ATOM 78 O VAL f 12 -6.265 -8.393 -3.914 1.00 0.71 \ ATOM 79 CB VAL f 12 -4.194 -9.727 -6.015 1.00 0.71 \ ATOM 80 CG1 VAL f 12 -4.144 -10.737 -7.141 1.00 0.71 \ ATOM 81 CG2 VAL f 12 -2.873 -8.965 -5.943 1.00 0.71 \ ATOM 82 N GLU f 13 -5.199 -6.693 -5.022 1.00 0.66 \ ATOM 83 CA GLU f 13 -5.489 -5.678 -4.034 1.00 0.66 \ ATOM 84 C GLU f 13 -6.983 -5.407 -3.935 1.00 0.66 \ ATOM 85 O GLU f 13 -7.477 -5.187 -2.854 1.00 0.66 \ ATOM 86 CB GLU f 13 -4.725 -4.386 -4.343 1.00 0.66 \ ATOM 87 CG GLU f 13 -5.159 -3.149 -3.537 1.00 0.66 \ ATOM 88 CD GLU f 13 -4.685 -3.140 -2.080 1.00 0.66 \ ATOM 89 OE1 GLU f 13 -3.564 -2.622 -1.827 1.00 0.66 \ ATOM 90 OE2 GLU f 13 -5.452 -3.597 -1.185 1.00 0.66 \ ATOM 91 N ALA f 14 -7.660 -5.402 -5.078 1.00 -0.00 \ ATOM 92 CA ALA f 14 -9.083 -5.102 -5.147 1.00 -0.00 \ ATOM 93 C ALA f 14 -9.888 -6.289 -4.548 1.00 -0.00 \ ATOM 94 O ALA f 14 -10.819 -6.078 -3.800 1.00 -0.00 \ ATOM 95 CB ALA f 14 -9.492 -4.796 -6.593 1.00 -0.00 \ ATOM 96 N LEU f 15 -9.490 -7.510 -4.871 1.00 1.70 \ ATOM 97 CA LEU f 15 -10.152 -8.711 -4.349 1.00 1.70 \ ATOM 98 C LEU f 15 -9.982 -8.781 -2.864 1.00 1.70 \ ATOM 99 O LEU f 15 -10.914 -9.192 -2.170 1.00 1.70 \ ATOM 100 CB LEU f 15 -9.590 -10.013 -4.933 1.00 1.70 \ ATOM 101 CG LEU f 15 -9.879 -10.232 -6.432 1.00 1.70 \ ATOM 102 CD1 LEU f 15 -9.220 -11.559 -6.772 1.00 1.70 \ ATOM 103 CD2 LEU f 15 -11.400 -10.194 -6.749 1.00 1.70 \ ATOM 104 N TYR f 16 -8.796 -8.402 -2.373 1.00 -0.22 \ ATOM 105 CA TYR f 16 -8.552 -8.309 -0.917 1.00 -0.22 \ ATOM 106 C TYR f 16 -9.683 -7.500 -0.200 1.00 -0.22 \ ATOM 107 O TYR f 16 -10.236 -7.927 0.824 1.00 -0.22 \ ATOM 108 CB TYR f 16 -7.127 -7.735 -0.658 1.00 -0.22 \ ATOM 109 CG TYR f 16 -6.909 -7.361 0.774 1.00 -0.22 \ ATOM 110 CD1 TYR f 16 -6.615 -8.337 1.745 1.00 -0.22 \ ATOM 111 CD2 TYR f 16 -7.107 -6.055 1.199 1.00 -0.22 \ ATOM 112 CE1 TYR f 16 -6.487 -8.004 3.083 1.00 -0.22 \ ATOM 113 CE2 TYR f 16 -6.955 -5.695 2.555 1.00 -0.22 \ ATOM 114 CZ TYR f 16 -6.648 -6.678 3.482 1.00 -0.22 \ ATOM 115 OH TYR f 16 -6.545 -6.338 4.813 1.00 -0.22 \ ATOM 116 N LEU f 17 -9.990 -6.320 -0.714 1.00 -0.23 \ ATOM 117 CA LEU f 17 -11.012 -5.469 -0.123 1.00 -0.23 \ ATOM 118 C LEU f 17 -12.442 -5.940 -0.517 1.00 -0.23 \ ATOM 119 O LEU f 17 -13.363 -5.871 0.297 1.00 -0.23 \ ATOM 120 CB LEU f 17 -10.826 -4.010 -0.532 1.00 -0.23 \ ATOM 121 CG LEU f 17 -9.560 -3.292 -0.070 1.00 -0.23 \ ATOM 122 CD1 LEU f 17 -9.368 -2.066 -0.917 1.00 -0.23 \ ATOM 123 CD2 LEU f 17 -9.581 -2.967 1.415 1.00 -0.23 \ ATOM 124 N VAL f 18 -12.622 -6.422 -1.729 1.00 0.28 \ ATOM 125 CA VAL f 18 -13.983 -6.815 -2.221 1.00 0.28 \ ATOM 126 C VAL f 18 -14.457 -8.066 -1.439 1.00 0.28 \ ATOM 127 O VAL f 18 -15.596 -8.136 -0.937 1.00 0.28 \ ATOM 128 CB VAL f 18 -14.006 -7.049 -3.767 1.00 0.28 \ ATOM 129 CG1 VAL f 18 -15.161 -7.946 -4.195 1.00 0.28 \ ATOM 130 CG2 VAL f 18 -14.082 -5.725 -4.534 1.00 0.28 \ ATOM 131 N CYS f 19 -13.536 -9.000 -1.282 1.00 1.70 \ ATOM 132 CA CYS f 19 -13.834 -10.321 -0.743 1.00 1.70 \ ATOM 133 C CYS f 19 -13.816 -10.511 0.785 1.00 1.70 \ ATOM 134 O CYS f 19 -14.395 -11.491 1.278 1.00 1.70 \ ATOM 135 CB CYS f 19 -12.878 -11.339 -1.364 1.00 1.70 \ ATOM 136 SG CYS f 19 -12.967 -11.447 -3.156 1.00 1.70 \ ATOM 137 N GLY f 20 -13.111 -9.640 1.515 1.00 -0.16 \ ATOM 138 CA GLY f 20 -13.064 -9.687 2.970 1.00 -0.16 \ ATOM 139 C GLY f 20 -12.598 -10.977 3.616 1.00 -0.16 \ ATOM 140 O GLY f 20 -11.590 -11.551 3.236 1.00 -0.16 \ ATOM 141 N GLU f 21 -13.346 -11.407 4.631 1.00 0.19 \ ATOM 142 CA GLU f 21 -13.107 -12.674 5.317 1.00 0.19 \ ATOM 143 C GLU f 21 -13.196 -13.895 4.385 1.00 0.19 \ ATOM 144 O GLU f 21 -12.658 -14.902 4.716 1.00 0.19 \ ATOM 145 CB GLU f 21 -14.103 -12.860 6.477 1.00 0.19 \ ATOM 146 N ARG f 22 -13.876 -13.838 3.243 1.00 -0.61 \ ATOM 147 CA ARG f 22 -13.889 -15.015 2.336 1.00 -0.61 \ ATOM 148 C ARG f 22 -12.506 -15.306 1.746 1.00 -0.61 \ ATOM 149 O ARG f 22 -12.107 -16.470 1.533 1.00 -0.61 \ ATOM 150 CB ARG f 22 -14.870 -14.804 1.174 1.00 -0.61 \ ATOM 151 CG ARG f 22 -16.354 -14.698 1.548 1.00 -0.61 \ ATOM 152 CD ARG f 22 -17.210 -14.207 0.379 1.00 -0.61 \ ATOM 153 NE ARG f 22 -17.241 -12.740 0.267 1.00 -0.61 \ ATOM 154 CZ ARG f 22 -17.839 -12.057 -0.721 1.00 -0.61 \ ATOM 155 NH1 ARG f 22 -18.455 -12.696 -1.717 1.00 -0.61 \ ATOM 156 NH2 ARG f 22 -17.821 -10.718 -0.713 1.00 -0.61 \ ATOM 157 N GLY f 23 -11.783 -14.233 1.435 1.00 1.70 \ ATOM 158 CA GLY f 23 -10.574 -14.362 0.662 1.00 1.70 \ ATOM 159 C GLY f 23 -10.920 -14.726 -0.768 1.00 1.70 \ ATOM 160 O GLY f 23 -12.084 -14.577 -1.206 1.00 1.70 \ ATOM 161 N PHE f 24 -9.911 -15.222 -1.484 1.00 1.13 \ ATOM 162 CA PHE f 24 -9.978 -15.376 -2.920 1.00 1.13 \ ATOM 163 C PHE f 24 -8.888 -16.313 -3.373 1.00 1.13 \ ATOM 164 O PHE f 24 -7.853 -16.431 -2.737 1.00 1.13 \ ATOM 165 CB PHE f 24 -9.875 -13.983 -3.644 1.00 1.13 \ ATOM 166 CG PHE f 24 -8.556 -13.265 -3.402 1.00 1.13 \ ATOM 167 CD1 PHE f 24 -7.432 -13.553 -4.177 1.00 1.13 \ ATOM 168 CD2 PHE f 24 -8.415 -12.374 -2.360 1.00 1.13 \ ATOM 169 CE1 PHE f 24 -6.197 -12.913 -3.948 1.00 1.13 \ ATOM 170 CE2 PHE f 24 -7.186 -11.733 -2.135 1.00 1.13 \ ATOM 171 CZ PHE f 24 -6.078 -12.026 -2.929 1.00 1.13 \ ATOM 172 N PHE f 25 -9.169 -17.002 -4.472 1.00 0.52 \ ATOM 173 CA PHE f 25 -8.159 -17.673 -5.287 1.00 0.52 \ ATOM 174 C PHE f 25 -7.829 -16.765 -6.455 1.00 0.52 \ ATOM 175 O PHE f 25 -8.711 -16.243 -7.136 1.00 0.52 \ ATOM 176 CB PHE f 25 -8.612 -19.046 -5.789 1.00 0.52 \ ATOM 177 CG PHE f 25 -7.915 -20.202 -5.103 1.00 0.52 \ ATOM 178 CD1 PHE f 25 -6.730 -20.731 -5.616 1.00 0.52 \ ATOM 179 CD2 PHE f 25 -8.441 -20.758 -3.936 1.00 0.52 \ ATOM 180 CE1 PHE f 25 -6.098 -21.799 -4.981 1.00 0.52 \ ATOM 181 CE2 PHE f 25 -7.809 -21.825 -3.305 1.00 0.52 \ ATOM 182 CZ PHE f 25 -6.637 -22.347 -3.826 1.00 0.52 \ ATOM 183 N TYR f 26 -6.542 -16.536 -6.642 1.00 -0.24 \ ATOM 184 CA TYR f 26 -6.084 -15.768 -7.753 1.00 -0.24 \ ATOM 185 C TYR f 26 -5.429 -16.785 -8.676 1.00 -0.24 \ ATOM 186 O TYR f 26 -4.355 -17.278 -8.338 1.00 -0.24 \ ATOM 187 CB TYR f 26 -5.073 -14.675 -7.324 1.00 -0.24 \ ATOM 188 CG TYR f 26 -4.582 -13.906 -8.547 1.00 -0.24 \ ATOM 189 CD1 TYR f 26 -5.452 -13.136 -9.296 1.00 -0.24 \ ATOM 190 CD2 TYR f 26 -3.249 -13.971 -8.955 1.00 -0.24 \ ATOM 191 CE1 TYR f 26 -5.020 -12.461 -10.427 1.00 -0.24 \ ATOM 192 CE2 TYR f 26 -2.808 -13.309 -10.082 1.00 -0.24 \ ATOM 193 CZ TYR f 26 -3.675 -12.542 -10.806 1.00 -0.24 \ ATOM 194 OH TYR f 26 -3.235 -11.883 -11.930 1.00 -0.24 \ ATOM 195 N THR f 27 -6.055 -17.074 -9.823 1.00 -0.98 \ ATOM 196 CA THR f 27 -5.418 -17.947 -10.819 1.00 -0.98 \ ATOM 197 C THR f 27 -5.242 -17.295 -12.205 1.00 -0.98 \ ATOM 198 O THR f 27 -6.226 -17.062 -12.932 1.00 -0.98 \ ATOM 199 CB THR f 27 -6.065 -19.345 -10.882 1.00 -0.98 \ ATOM 200 OG1 THR f 27 -7.487 -19.241 -10.900 1.00 -0.98 \ ATOM 201 CG2 THR f 27 -5.640 -20.172 -9.642 1.00 -0.98 \ ATOM 202 N PRO f 28 -3.975 -17.015 -12.578 1.00 -0.79 \ ATOM 203 CA PRO f 28 -3.671 -16.333 -13.827 1.00 -0.79 \ ATOM 204 C PRO f 28 -3.627 -17.259 -15.053 1.00 -0.79 \ ATOM 205 O PRO f 28 -4.099 -16.864 -16.111 1.00 -0.79 \ ATOM 206 CB PRO f 28 -2.297 -15.718 -13.549 1.00 -0.79 \ ATOM 207 CG PRO f 28 -1.649 -16.677 -12.618 1.00 -0.79 \ ATOM 208 CD PRO f 28 -2.741 -17.340 -11.833 1.00 -0.79 \ ATOM 209 N LYS f 29 -3.061 -18.459 -14.931 1.00 -0.90 \ ATOM 210 CA LYS f 29 -3.032 -19.394 -16.048 1.00 -0.90 \ ATOM 211 C LYS f 29 -4.188 -20.375 -15.875 1.00 -0.90 \ ATOM 212 O LYS f 29 -4.086 -21.340 -15.111 1.00 -0.90 \ """, "e5mt3f1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt3f1_csv", state=0, origin=1) cmd.zoom("e5mt3f1_csv", animate=-1)