cmd.read_pdbstr("""\ ATOM 1 N HIS Z 5 -49.370 -22.457 14.991 1.00 -0.04 \ ATOM 2 CA HIS Z 5 -49.237 -21.538 16.173 1.00 -0.04 \ ATOM 3 C HIS Z 5 -48.642 -22.298 17.379 1.00 -0.04 \ ATOM 4 O HIS Z 5 -47.725 -21.801 17.973 1.00 -0.04 \ ATOM 5 CB HIS Z 5 -50.565 -20.859 16.521 1.00 -0.04 \ ATOM 6 N LEU Z 6 -49.152 -23.490 17.702 1.00 1.15 \ ATOM 7 CA LEU Z 6 -48.733 -24.265 18.906 1.00 1.15 \ ATOM 8 C LEU Z 6 -48.263 -25.668 18.580 1.00 1.15 \ ATOM 9 O LEU Z 6 -49.067 -26.586 18.438 1.00 1.15 \ ATOM 10 CB LEU Z 6 -49.889 -24.345 19.905 1.00 1.15 \ ATOM 11 CG LEU Z 6 -50.255 -23.044 20.666 1.00 1.15 \ ATOM 12 CD1 LEU Z 6 -51.410 -23.257 21.653 1.00 1.15 \ ATOM 13 CD2 LEU Z 6 -49.068 -22.406 21.355 1.00 1.15 \ ATOM 14 N CYS Z 7 -46.961 -25.860 18.472 1.00 1.70 \ ATOM 15 CA CYS Z 7 -46.430 -27.174 18.107 1.00 1.70 \ ATOM 16 C CYS Z 7 -45.405 -27.691 19.100 1.00 1.70 \ ATOM 17 O CYS Z 7 -44.717 -26.919 19.717 1.00 1.70 \ ATOM 18 CB CYS Z 7 -45.727 -27.069 16.747 1.00 1.70 \ ATOM 19 SG CYS Z 7 -46.852 -26.455 15.451 1.00 1.70 \ ATOM 20 N GLY Z 8 -45.262 -28.994 19.206 1.00 0.71 \ ATOM 21 CA GLY Z 8 -44.147 -29.547 19.975 1.00 0.71 \ ATOM 22 C GLY Z 8 -44.355 -29.283 21.459 1.00 0.71 \ ATOM 23 O GLY Z 8 -45.478 -29.346 21.923 1.00 0.71 \ ATOM 24 N SER Z 9 -43.278 -28.957 22.185 1.00 -0.48 \ ATOM 25 CA SER Z 9 -43.357 -28.722 23.630 1.00 -0.48 \ ATOM 26 C SER Z 9 -44.198 -27.474 23.894 1.00 -0.48 \ ATOM 27 O SER Z 9 -44.701 -27.293 25.007 1.00 -0.48 \ ATOM 28 CB SER Z 9 -41.969 -28.492 24.263 1.00 -0.48 \ ATOM 29 OG SER Z 9 -41.270 -27.439 23.636 1.00 -0.48 \ ATOM 30 N HIS Z 10 -44.327 -26.593 22.895 1.00 -0.23 \ ATOM 31 CA HIS Z 10 -45.197 -25.415 23.061 1.00 -0.23 \ ATOM 32 C HIS Z 10 -46.687 -25.785 23.202 1.00 -0.23 \ ATOM 33 O HIS Z 10 -47.390 -25.082 23.836 1.00 -0.23 \ ATOM 34 CB HIS Z 10 -44.952 -24.311 21.999 1.00 -0.23 \ ATOM 35 CG HIS Z 10 -43.537 -23.821 21.938 1.00 -0.23 \ ATOM 36 ND1 HIS Z 10 -42.930 -23.176 22.984 1.00 -0.23 \ ATOM 37 CD2 HIS Z 10 -42.589 -23.954 20.979 1.00 -0.23 \ ATOM 38 CE1 HIS Z 10 -41.685 -22.878 22.656 1.00 -0.23 \ ATOM 39 NE2 HIS Z 10 -41.464 -23.331 21.428 1.00 -0.23 \ ATOM 40 N LEU Z 11 -47.153 -26.846 22.598 1.00 1.70 \ ATOM 41 CA LEU Z 11 -48.535 -27.278 22.734 1.00 1.70 \ ATOM 42 C LEU Z 11 -48.716 -27.938 24.135 1.00 1.70 \ ATOM 43 O LEU Z 11 -49.698 -27.724 24.824 1.00 1.70 \ ATOM 44 CB LEU Z 11 -48.871 -28.249 21.585 1.00 1.70 \ ATOM 45 CG LEU Z 11 -50.212 -28.939 21.662 1.00 1.70 \ ATOM 46 CD1 LEU Z 11 -51.369 -27.964 21.860 1.00 1.70 \ ATOM 47 CD2 LEU Z 11 -50.428 -29.794 20.429 1.00 1.70 \ ATOM 48 N VAL Z 12 -47.704 -28.667 24.575 1.00 0.71 \ ATOM 49 CA VAL Z 12 -47.697 -29.186 25.925 1.00 0.71 \ ATOM 50 C VAL Z 12 -47.767 -28.037 26.944 1.00 0.71 \ ATOM 51 O VAL Z 12 -48.515 -28.124 27.946 1.00 0.71 \ ATOM 52 CB VAL Z 12 -46.503 -30.105 26.196 1.00 0.71 \ ATOM 53 CG1 VAL Z 12 -46.431 -30.483 27.679 1.00 0.71 \ ATOM 54 CG2 VAL Z 12 -46.659 -31.386 25.377 1.00 0.71 \ ATOM 55 N GLU Z 13 -47.014 -26.988 26.731 1.00 0.67 \ ATOM 56 CA GLU Z 13 -46.996 -25.850 27.655 1.00 0.67 \ ATOM 57 C GLU Z 13 -48.383 -25.158 27.658 1.00 0.67 \ ATOM 58 O GLU Z 13 -48.883 -24.767 28.690 1.00 0.67 \ ATOM 59 CB GLU Z 13 -45.857 -24.855 27.315 1.00 0.67 \ ATOM 60 N ALA Z 14 -49.073 -25.080 26.508 1.00 -0.02 \ ATOM 61 CA ALA Z 14 -50.415 -24.528 26.513 1.00 -0.02 \ ATOM 62 C ALA Z 14 -51.423 -25.439 27.168 1.00 -0.02 \ ATOM 63 O ALA Z 14 -52.289 -24.977 27.916 1.00 -0.02 \ ATOM 64 CB ALA Z 14 -50.869 -24.165 25.075 1.00 -0.02 \ ATOM 65 N LEU Z 15 -51.289 -26.736 26.963 1.00 1.70 \ ATOM 66 CA LEU Z 15 -52.145 -27.694 27.630 1.00 1.70 \ ATOM 67 C LEU Z 15 -51.909 -27.556 29.130 1.00 1.70 \ ATOM 68 O LEU Z 15 -52.854 -27.567 29.868 1.00 1.70 \ ATOM 69 CB LEU Z 15 -51.868 -29.136 27.203 1.00 1.70 \ ATOM 70 CG LEU Z 15 -52.607 -29.660 25.990 1.00 1.70 \ ATOM 71 CD1 LEU Z 15 -51.871 -30.887 25.391 1.00 1.70 \ ATOM 72 CD2 LEU Z 15 -54.031 -29.965 26.410 1.00 1.70 \ ATOM 73 N TYR Z 16 -50.653 -27.394 29.563 1.00 -0.22 \ ATOM 74 CA TYR Z 16 -50.461 -27.238 31.001 1.00 -0.22 \ ATOM 75 C TYR Z 16 -51.055 -25.949 31.539 1.00 -0.22 \ ATOM 76 O TYR Z 16 -51.600 -25.915 32.653 1.00 -0.22 \ ATOM 77 CB TYR Z 16 -49.009 -27.347 31.375 1.00 -0.22 \ ATOM 78 CG TYR Z 16 -48.857 -27.495 32.884 1.00 -0.22 \ ATOM 79 CD1 TYR Z 16 -48.982 -28.725 33.507 1.00 -0.22 \ ATOM 80 CD2 TYR Z 16 -48.549 -26.418 33.650 1.00 -0.22 \ ATOM 81 CE1 TYR Z 16 -48.830 -28.849 34.898 1.00 -0.22 \ ATOM 82 CE2 TYR Z 16 -48.382 -26.517 35.021 1.00 -0.22 \ ATOM 83 CZ TYR Z 16 -48.548 -27.739 35.633 1.00 -0.22 \ ATOM 84 OH TYR Z 16 -48.310 -27.865 36.989 1.00 -0.22 \ ATOM 85 N LEU Z 17 -51.006 -24.871 30.781 1.00 -0.23 \ ATOM 86 CA LEU Z 17 -51.574 -23.617 31.201 1.00 -0.23 \ ATOM 87 C LEU Z 17 -53.119 -23.725 31.435 1.00 -0.23 \ ATOM 88 O LEU Z 17 -53.604 -23.328 32.434 1.00 -0.23 \ ATOM 89 CB LEU Z 17 -51.201 -22.494 30.216 1.00 -0.23 \ ATOM 90 CG LEU Z 17 -51.975 -21.165 30.445 1.00 -0.23 \ ATOM 91 CD1 LEU Z 17 -51.421 -20.478 31.695 1.00 -0.23 \ ATOM 92 CD2 LEU Z 17 -51.864 -20.277 29.250 1.00 -0.23 \ ATOM 93 N VAL Z 18 -53.839 -24.370 30.535 1.00 0.26 \ ATOM 94 CA VAL Z 18 -55.280 -24.462 30.640 1.00 0.26 \ ATOM 95 C VAL Z 18 -55.691 -25.639 31.549 1.00 0.26 \ ATOM 96 O VAL Z 18 -56.604 -25.492 32.377 1.00 0.26 \ ATOM 97 CB VAL Z 18 -55.878 -24.564 29.224 1.00 0.26 \ ATOM 98 CG1 VAL Z 18 -57.380 -24.849 29.270 1.00 0.26 \ ATOM 99 CG2 VAL Z 18 -55.543 -23.283 28.455 1.00 0.26 \ ATOM 100 N CYS Z 19 -55.008 -26.779 31.422 1.00 1.70 \ ATOM 101 CA CYS Z 19 -55.450 -28.055 32.074 1.00 1.70 \ ATOM 102 C CYS Z 19 -54.577 -28.566 33.213 1.00 1.70 \ ATOM 103 O CYS Z 19 -54.938 -29.578 33.844 1.00 1.70 \ ATOM 104 CB CYS Z 19 -55.503 -29.194 31.062 1.00 1.70 \ ATOM 105 SG CYS Z 19 -56.499 -28.864 29.635 1.00 1.70 \ ATOM 106 N GLY Z 20 -53.490 -27.869 33.507 1.00 -0.16 \ ATOM 107 CA GLY Z 20 -52.511 -28.335 34.472 1.00 -0.16 \ ATOM 108 C GLY Z 20 -53.035 -28.660 35.868 1.00 -0.16 \ ATOM 109 O GLY Z 20 -52.479 -29.527 36.548 1.00 -0.16 \ ATOM 110 N GLU Z 21 -54.087 -27.978 36.315 1.00 0.19 \ ATOM 111 CA GLU Z 21 -54.608 -28.290 37.684 1.00 0.19 \ ATOM 112 C GLU Z 21 -55.451 -29.569 37.658 1.00 0.19 \ ATOM 113 O GLU Z 21 -55.413 -30.329 38.602 1.00 0.19 \ ATOM 114 CB GLU Z 21 -55.413 -27.138 38.330 1.00 0.19 \ ATOM 115 CG GLU Z 21 -54.587 -25.903 38.538 1.00 0.19 \ ATOM 116 CD GLU Z 21 -55.305 -24.815 39.344 1.00 0.19 \ ATOM 117 OE1 GLU Z 21 -55.453 -24.992 40.566 1.00 0.19 \ ATOM 118 OE2 GLU Z 21 -55.628 -23.750 38.783 1.00 0.19 \ ATOM 119 N ARG Z 22 -56.129 -29.819 36.549 1.00 -0.61 \ ATOM 120 CA ARG Z 22 -56.983 -30.967 36.355 1.00 -0.61 \ ATOM 121 C ARG Z 22 -56.298 -32.182 35.744 1.00 -0.61 \ ATOM 122 O ARG Z 22 -56.745 -33.292 35.926 1.00 -0.61 \ ATOM 123 CB ARG Z 22 -58.139 -30.580 35.418 1.00 -0.61 \ ATOM 124 CG ARG Z 22 -59.106 -29.579 36.036 1.00 -0.61 \ ATOM 125 CD ARG Z 22 -60.108 -29.023 35.024 1.00 -0.61 \ ATOM 126 NE ARG Z 22 -59.727 -27.689 34.559 1.00 -0.61 \ ATOM 127 CZ ARG Z 22 -60.462 -26.924 33.749 1.00 -0.61 \ ATOM 128 NH1 ARG Z 22 -61.623 -27.361 33.277 1.00 -0.61 \ ATOM 129 NH2 ARG Z 22 -60.011 -25.723 33.386 1.00 -0.61 \ ATOM 130 N GLY Z 23 -55.272 -31.971 34.940 1.00 1.70 \ ATOM 131 CA GLY Z 23 -54.702 -33.054 34.137 1.00 1.70 \ ATOM 132 C GLY Z 23 -55.197 -33.074 32.716 1.00 1.70 \ ATOM 133 O GLY Z 23 -56.120 -32.345 32.327 1.00 1.70 \ ATOM 134 N PHE Z 24 -54.542 -33.903 31.907 1.00 1.13 \ ATOM 135 CA PHE Z 24 -54.861 -33.948 30.485 1.00 1.13 \ ATOM 136 C PHE Z 24 -54.133 -35.130 29.893 1.00 1.13 \ ATOM 137 O PHE Z 24 -53.219 -35.671 30.513 1.00 1.13 \ ATOM 138 CB PHE Z 24 -54.476 -32.644 29.780 1.00 1.13 \ ATOM 139 CG PHE Z 24 -52.992 -32.293 29.850 1.00 1.13 \ ATOM 140 CD1 PHE Z 24 -52.136 -32.719 28.850 1.00 1.13 \ ATOM 141 CD2 PHE Z 24 -52.481 -31.450 30.843 1.00 1.13 \ ATOM 142 CE1 PHE Z 24 -50.766 -32.395 28.873 1.00 1.13 \ ATOM 143 CE2 PHE Z 24 -51.128 -31.105 30.862 1.00 1.13 \ ATOM 144 CZ PHE Z 24 -50.258 -31.583 29.866 1.00 1.13 \ ATOM 145 N PHE Z 25 -54.554 -35.548 28.709 1.00 0.51 \ ATOM 146 CA PHE Z 25 -53.888 -36.633 27.991 1.00 0.51 \ ATOM 147 C PHE Z 25 -53.192 -35.932 26.839 1.00 0.51 \ ATOM 148 O PHE Z 25 -53.757 -35.018 26.262 1.00 0.51 \ ATOM 149 CB PHE Z 25 -54.894 -37.685 27.471 1.00 0.51 \ ATOM 150 N TYR Z 26 -51.939 -36.262 26.560 1.00 -0.25 \ ATOM 151 CA TYR Z 26 -51.274 -35.754 25.331 1.00 -0.25 \ ATOM 152 C TYR Z 26 -51.023 -37.000 24.530 1.00 -0.25 \ ATOM 153 O TYR Z 26 -50.319 -37.916 25.031 1.00 -0.25 \ ATOM 154 CB TYR Z 26 -49.917 -35.044 25.623 1.00 -0.25 \ ATOM 155 CG TYR Z 26 -49.090 -34.605 24.408 1.00 -0.25 \ ATOM 156 CD1 TYR Z 26 -49.486 -33.575 23.596 1.00 -0.25 \ ATOM 157 CD2 TYR Z 26 -47.906 -35.233 24.098 1.00 -0.25 \ ATOM 158 CE1 TYR Z 26 -48.735 -33.194 22.499 1.00 -0.25 \ ATOM 159 CE2 TYR Z 26 -47.157 -34.880 23.012 1.00 -0.25 \ ATOM 160 CZ TYR Z 26 -47.576 -33.858 22.211 1.00 -0.25 \ ATOM 161 OH TYR Z 26 -46.789 -33.522 21.137 1.00 -0.25 \ ATOM 162 N THR Z 27 -51.574 -37.033 23.308 1.00 -0.98 \ ATOM 163 CA THR Z 27 -51.373 -38.122 22.358 1.00 -0.98 \ ATOM 164 C THR Z 27 -51.114 -37.558 20.934 1.00 -0.98 \ ATOM 165 O THR Z 27 -52.049 -37.345 20.181 1.00 -0.98 \ ATOM 166 CB THR Z 27 -52.608 -39.041 22.298 1.00 -0.98 \ ATOM 167 OG1 THR Z 27 -53.233 -39.168 23.600 1.00 -0.98 \ ATOM 168 CG2 THR Z 27 -52.191 -40.429 21.762 1.00 -0.98 \ ATOM 169 N PRO Z 28 -49.843 -37.342 20.558 1.00 -0.80 \ ATOM 170 CA PRO Z 28 -49.566 -36.758 19.247 1.00 -0.80 \ ATOM 171 C PRO Z 28 -49.784 -37.753 18.078 1.00 -0.80 \ ATOM 172 O PRO Z 28 -50.840 -37.774 17.438 1.00 -0.80 \ ATOM 173 CB PRO Z 28 -48.083 -36.425 19.361 1.00 -0.80 \ ATOM 174 CG PRO Z 28 -47.534 -37.567 20.165 1.00 -0.80 \ ATOM 175 CD PRO Z 28 -48.629 -37.960 21.131 1.00 -0.80 \ """, "e5mt9B1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt9B1_csv", state=0, origin=1) cmd.zoom("e5mt9B1_csv", animate=-1)