cmd.read_pdbstr("""\ ATOM 1 N HIS L 5 6.872 -40.361 31.746 1.00 -0.05 \ ATOM 2 CA HIS L 5 7.851 -41.427 31.326 1.00 -0.05 \ ATOM 3 C HIS L 5 7.612 -41.909 29.864 1.00 -0.05 \ ATOM 4 O HIS L 5 6.497 -41.828 29.359 1.00 -0.05 \ ATOM 5 N LEU L 6 8.678 -42.346 29.208 1.00 1.15 \ ATOM 6 CA LEU L 6 8.574 -43.145 27.994 1.00 1.15 \ ATOM 7 C LEU L 6 8.729 -44.616 28.373 1.00 1.15 \ ATOM 8 O LEU L 6 9.824 -45.084 28.679 1.00 1.15 \ ATOM 9 CB LEU L 6 9.611 -42.737 26.979 1.00 1.15 \ ATOM 10 CG LEU L 6 9.525 -41.294 26.443 1.00 1.15 \ ATOM 11 CD1 LEU L 6 10.770 -40.947 25.664 1.00 1.15 \ ATOM 12 CD2 LEU L 6 8.283 -41.067 25.587 1.00 1.15 \ ATOM 13 N CYS L 7 7.623 -45.343 28.340 1.00 1.70 \ ATOM 14 CA CYS L 7 7.609 -46.764 28.680 1.00 1.70 \ ATOM 15 C CYS L 7 7.052 -47.619 27.539 1.00 1.70 \ ATOM 16 O CYS L 7 6.235 -47.165 26.751 1.00 1.70 \ ATOM 17 CB CYS L 7 6.733 -46.953 29.899 1.00 1.70 \ ATOM 18 SG CYS L 7 7.369 -45.958 31.293 1.00 1.70 \ ATOM 19 N GLY L 8 7.474 -48.874 27.514 1.00 0.71 \ ATOM 20 CA GLY L 8 6.923 -49.859 26.605 1.00 0.71 \ ATOM 21 C GLY L 8 7.100 -49.434 25.178 1.00 0.71 \ ATOM 22 O GLY L 8 8.154 -48.937 24.826 1.00 0.71 \ ATOM 23 N SER L 9 6.058 -49.587 24.368 1.00 -0.48 \ ATOM 24 CA SER L 9 6.153 -49.236 22.977 1.00 -0.48 \ ATOM 25 C SER L 9 6.293 -47.722 22.729 1.00 -0.48 \ ATOM 26 O SER L 9 6.746 -47.321 21.666 1.00 -0.48 \ ATOM 27 CB SER L 9 4.936 -49.760 22.210 1.00 -0.48 \ ATOM 28 OG SER L 9 3.805 -48.997 22.516 1.00 -0.48 \ ATOM 29 N HIS L 10 5.901 -46.889 23.697 1.00 -0.23 \ ATOM 30 CA HIS L 10 6.133 -45.431 23.547 1.00 -0.23 \ ATOM 31 C HIS L 10 7.627 -45.087 23.487 1.00 -0.23 \ ATOM 32 O HIS L 10 8.083 -44.157 22.781 1.00 -0.23 \ ATOM 33 CB HIS L 10 5.428 -44.674 24.678 1.00 -0.23 \ ATOM 34 CG HIS L 10 3.938 -44.846 24.688 1.00 -0.23 \ ATOM 35 ND1 HIS L 10 3.132 -44.411 23.654 1.00 -0.23 \ ATOM 36 CD2 HIS L 10 3.120 -45.505 25.552 1.00 -0.23 \ ATOM 37 CE1 HIS L 10 1.891 -44.784 23.886 1.00 -0.23 \ ATOM 38 NE2 HIS L 10 1.855 -45.444 25.034 1.00 -0.23 \ ATOM 39 N LEU L 11 8.439 -45.867 24.162 1.00 1.70 \ ATOM 40 CA LEU L 11 9.863 -45.638 24.171 1.00 1.70 \ ATOM 41 C LEU L 11 10.407 -45.997 22.837 1.00 1.70 \ ATOM 42 O LEU L 11 11.199 -45.223 22.264 1.00 1.70 \ ATOM 43 CB LEU L 11 10.578 -46.464 25.210 1.00 1.70 \ ATOM 44 CG LEU L 11 11.897 -45.914 25.769 1.00 1.70 \ ATOM 45 CD1 LEU L 11 12.694 -47.123 26.250 1.00 1.70 \ ATOM 46 CD2 LEU L 11 12.753 -45.014 24.914 1.00 1.70 \ ATOM 47 N VAL L 12 9.942 -47.116 22.266 1.00 0.71 \ ATOM 48 CA VAL L 12 10.381 -47.389 20.898 1.00 0.71 \ ATOM 49 C VAL L 12 9.816 -46.395 19.852 1.00 0.71 \ ATOM 50 O VAL L 12 10.502 -46.123 18.847 1.00 0.71 \ ATOM 51 CB VAL L 12 10.412 -48.877 20.406 1.00 0.71 \ ATOM 52 CG1 VAL L 12 10.371 -49.867 21.529 1.00 0.71 \ ATOM 53 CG2 VAL L 12 9.519 -49.172 19.271 1.00 0.71 \ ATOM 54 N GLU L 13 8.621 -45.851 20.080 1.00 0.66 \ ATOM 55 CA GLU L 13 8.101 -44.770 19.177 1.00 0.66 \ ATOM 56 C GLU L 13 9.060 -43.570 19.227 1.00 0.66 \ ATOM 57 O GLU L 13 9.461 -43.019 18.201 1.00 0.66 \ ATOM 58 CB GLU L 13 6.703 -44.275 19.643 1.00 0.66 \ ATOM 59 CG GLU L 13 5.484 -45.173 19.378 1.00 0.66 \ ATOM 60 CD GLU L 13 4.163 -44.702 20.060 1.00 0.66 \ ATOM 61 OE1 GLU L 13 4.133 -43.838 20.982 1.00 0.66 \ ATOM 62 OE2 GLU L 13 3.099 -45.223 19.692 1.00 0.66 \ ATOM 63 N ALA L 14 9.510 -43.218 20.450 1.00 -0.00 \ ATOM 64 CA ALA L 14 10.466 -42.086 20.599 1.00 -0.00 \ ATOM 65 C ALA L 14 11.837 -42.342 19.958 1.00 -0.00 \ ATOM 66 O ALA L 14 12.352 -41.540 19.193 1.00 -0.00 \ ATOM 67 CB ALA L 14 10.547 -41.686 22.056 1.00 -0.00 \ ATOM 68 N LEU L 15 12.397 -43.527 20.175 1.00 1.70 \ ATOM 69 CA LEU L 15 13.576 -44.002 19.458 1.00 1.70 \ ATOM 70 C LEU L 15 13.418 -43.927 17.977 1.00 1.70 \ ATOM 71 O LEU L 15 14.330 -43.471 17.285 1.00 1.70 \ ATOM 72 CB LEU L 15 13.957 -45.446 19.844 1.00 1.70 \ ATOM 73 CG LEU L 15 14.939 -45.709 20.975 1.00 1.70 \ ATOM 74 CD1 LEU L 15 15.059 -47.216 21.154 1.00 1.70 \ ATOM 75 CD2 LEU L 15 16.306 -45.054 20.661 1.00 1.70 \ ATOM 76 N TYR L 16 12.282 -44.350 17.470 1.00 -0.22 \ ATOM 77 CA TYR L 16 12.100 -44.292 16.044 1.00 -0.22 \ ATOM 78 C TYR L 16 12.089 -42.855 15.521 1.00 -0.22 \ ATOM 79 O TYR L 16 12.560 -42.568 14.383 1.00 -0.22 \ ATOM 80 CB TYR L 16 10.809 -45.037 15.625 1.00 -0.22 \ ATOM 81 CG TYR L 16 10.724 -45.139 14.141 1.00 -0.22 \ ATOM 82 CD1 TYR L 16 11.440 -46.094 13.462 1.00 -0.22 \ ATOM 83 CD2 TYR L 16 10.004 -44.206 13.383 1.00 -0.22 \ ATOM 84 CE1 TYR L 16 11.414 -46.216 12.058 1.00 -0.22 \ ATOM 85 CE2 TYR L 16 9.974 -44.313 11.968 1.00 -0.22 \ ATOM 86 CZ TYR L 16 10.640 -45.310 11.320 1.00 -0.22 \ ATOM 87 OH TYR L 16 10.699 -45.461 9.952 1.00 -0.22 \ ATOM 88 N LEU L 17 11.520 -41.964 16.325 1.00 -0.23 \ ATOM 89 CA LEU L 17 11.351 -40.569 15.898 1.00 -0.23 \ ATOM 90 C LEU L 17 12.759 -39.941 15.788 1.00 -0.23 \ ATOM 91 O LEU L 17 13.071 -39.260 14.829 1.00 -0.23 \ ATOM 92 CB LEU L 17 10.476 -39.818 16.906 1.00 -0.23 \ ATOM 93 CG LEU L 17 10.451 -38.297 16.717 1.00 -0.23 \ ATOM 94 CD1 LEU L 17 9.883 -37.919 15.384 1.00 -0.23 \ ATOM 95 CD2 LEU L 17 9.628 -37.718 17.813 1.00 -0.23 \ ATOM 96 N VAL L 18 13.600 -40.201 16.780 1.00 0.28 \ ATOM 97 CA VAL L 18 14.973 -39.636 16.778 1.00 0.28 \ ATOM 98 C VAL L 18 15.962 -40.378 15.861 1.00 0.28 \ ATOM 99 O VAL L 18 16.676 -39.734 15.080 1.00 0.28 \ ATOM 100 CB VAL L 18 15.500 -39.510 18.215 1.00 0.28 \ ATOM 101 CG1 VAL L 18 16.925 -38.967 18.220 1.00 0.28 \ ATOM 102 CG2 VAL L 18 14.587 -38.605 19.057 1.00 0.28 \ ATOM 103 N CYS L 19 15.966 -41.717 15.913 1.00 1.70 \ ATOM 104 CA CYS L 19 16.965 -42.564 15.198 1.00 1.70 \ ATOM 105 C CYS L 19 16.435 -43.316 13.986 1.00 1.70 \ ATOM 106 O CYS L 19 17.187 -44.083 13.369 1.00 1.70 \ ATOM 107 CB CYS L 19 17.516 -43.631 16.121 1.00 1.70 \ ATOM 108 SG CYS L 19 18.026 -43.078 17.727 1.00 1.70 \ ATOM 109 N GLY L 20 15.152 -43.149 13.628 1.00 -0.16 \ ATOM 110 CA GLY L 20 14.562 -43.954 12.558 1.00 -0.16 \ ATOM 111 C GLY L 20 15.226 -43.870 11.213 1.00 -0.16 \ ATOM 112 O GLY L 20 15.067 -44.775 10.368 1.00 -0.16 \ ATOM 113 N GLU L 21 15.902 -42.771 10.918 1.00 0.19 \ ATOM 114 CA GLU L 21 16.611 -42.701 9.636 1.00 0.19 \ ATOM 115 C GLU L 21 18.014 -43.296 9.740 1.00 0.19 \ ATOM 116 O GLU L 21 18.525 -43.720 8.746 1.00 0.19 \ ATOM 117 CB GLU L 21 16.669 -41.282 9.072 1.00 0.19 \ ATOM 118 CG GLU L 21 15.345 -40.721 8.577 1.00 0.19 \ ATOM 119 CD GLU L 21 15.523 -39.330 7.942 1.00 0.19 \ ATOM 120 OE1 GLU L 21 15.898 -39.271 6.737 1.00 0.19 \ ATOM 121 OE2 GLU L 21 15.295 -38.306 8.641 1.00 0.19 \ ATOM 122 N ARG L 22 18.608 -43.318 10.940 1.00 -0.61 \ ATOM 123 CA ARG L 22 19.973 -43.804 11.173 1.00 -0.61 \ ATOM 124 C ARG L 22 20.036 -45.281 11.583 1.00 -0.61 \ ATOM 125 O ARG L 22 21.051 -45.938 11.396 1.00 -0.61 \ ATOM 126 CB ARG L 22 20.612 -43.051 12.328 1.00 -0.61 \ ATOM 127 CG ARG L 22 20.773 -41.554 12.128 1.00 -0.61 \ ATOM 128 CD ARG L 22 21.330 -40.923 13.404 1.00 -0.61 \ ATOM 129 NE ARG L 22 21.051 -39.486 13.505 1.00 -0.61 \ ATOM 130 CZ ARG L 22 21.471 -38.680 14.488 1.00 -0.61 \ ATOM 131 NH1 ARG L 22 22.204 -39.142 15.509 1.00 -0.61 \ ATOM 132 NH2 ARG L 22 21.154 -37.386 14.441 1.00 -0.61 \ ATOM 133 N GLY L 23 18.990 -45.759 12.241 1.00 1.70 \ ATOM 134 CA GLY L 23 18.939 -47.110 12.720 1.00 1.70 \ ATOM 135 C GLY L 23 19.171 -47.066 14.182 1.00 1.70 \ ATOM 136 O GLY L 23 19.624 -46.033 14.739 1.00 1.70 \ ATOM 137 N PHE L 24 18.842 -48.180 14.841 1.00 1.13 \ ATOM 138 CA PHE L 24 19.093 -48.295 16.254 1.00 1.13 \ ATOM 139 C PHE L 24 18.946 -49.726 16.745 1.00 1.13 \ ATOM 140 O PHE L 24 18.427 -50.586 16.041 1.00 1.13 \ ATOM 141 CB PHE L 24 18.208 -47.389 17.073 1.00 1.13 \ ATOM 142 CG PHE L 24 16.705 -47.662 16.948 1.00 1.13 \ ATOM 143 CD1 PHE L 24 15.951 -47.050 15.927 1.00 1.13 \ ATOM 144 CD2 PHE L 24 16.059 -48.471 17.863 1.00 1.13 \ ATOM 145 CE1 PHE L 24 14.576 -47.346 15.819 1.00 1.13 \ ATOM 146 CE2 PHE L 24 14.703 -48.713 17.778 1.00 1.13 \ ATOM 147 CZ PHE L 24 13.970 -48.139 16.747 1.00 1.13 \ ATOM 148 N PHE L 25 19.492 -49.954 17.937 1.00 0.52 \ ATOM 149 CA PHE L 25 19.320 -51.182 18.702 1.00 0.52 \ ATOM 150 C PHE L 25 18.415 -50.835 19.855 1.00 0.52 \ ATOM 151 O PHE L 25 18.646 -49.840 20.513 1.00 0.52 \ ATOM 152 CB PHE L 25 20.671 -51.690 19.262 1.00 0.52 \ ATOM 153 CG PHE L 25 21.491 -52.430 18.256 1.00 0.52 \ ATOM 154 CD1 PHE L 25 22.372 -51.751 17.418 1.00 0.52 \ ATOM 155 CD2 PHE L 25 21.373 -53.818 18.134 1.00 0.52 \ ATOM 156 CE1 PHE L 25 23.137 -52.431 16.480 1.00 0.52 \ ATOM 157 CE2 PHE L 25 22.134 -54.508 17.189 1.00 0.52 \ ATOM 158 CZ PHE L 25 23.003 -53.816 16.355 1.00 0.52 \ ATOM 159 N TYR L 26 17.388 -51.653 20.098 1.00 -0.24 \ ATOM 160 CA TYR L 26 16.607 -51.587 21.327 1.00 -0.24 \ ATOM 161 C TYR L 26 16.983 -52.827 22.085 1.00 -0.24 \ ATOM 162 O TYR L 26 16.767 -53.937 21.615 1.00 -0.24 \ ATOM 163 CB TYR L 26 15.078 -51.595 21.047 1.00 -0.24 \ ATOM 164 CG TYR L 26 14.155 -51.668 22.266 1.00 -0.24 \ ATOM 165 CD1 TYR L 26 13.978 -50.595 23.110 1.00 -0.24 \ ATOM 166 CD2 TYR L 26 13.417 -52.832 22.549 1.00 -0.24 \ ATOM 167 CE1 TYR L 26 13.136 -50.693 24.237 1.00 -0.24 \ ATOM 168 CE2 TYR L 26 12.572 -52.929 23.641 1.00 -0.24 \ ATOM 169 CZ TYR L 26 12.438 -51.854 24.489 1.00 -0.24 \ ATOM 170 OH TYR L 26 11.633 -52.015 25.580 1.00 -0.24 \ ATOM 171 N THR L 27 17.532 -52.624 23.270 1.00 -0.98 \ ATOM 172 CA THR L 27 18.152 -53.667 24.074 1.00 -0.98 \ ATOM 173 C THR L 27 17.700 -53.359 25.496 1.00 -0.98 \ ATOM 174 O THR L 27 18.437 -52.759 26.275 1.00 -0.98 \ ATOM 175 CB THR L 27 19.683 -53.536 23.996 1.00 -0.98 \ ATOM 176 OG1 THR L 27 20.017 -52.161 24.167 1.00 -0.98 \ ATOM 177 CG2 THR L 27 20.214 -53.935 22.679 1.00 -0.98 \ ATOM 178 N PRO L 28 16.457 -53.697 25.825 1.00 -0.79 \ ATOM 179 CA PRO L 28 15.941 -53.248 27.093 1.00 -0.79 \ ATOM 180 C PRO L 28 16.729 -53.753 28.320 1.00 -0.79 \ ATOM 181 O PRO L 28 16.670 -53.090 29.358 1.00 -0.79 \ ATOM 182 CB PRO L 28 14.526 -53.804 27.089 1.00 -0.79 \ ATOM 183 CG PRO L 28 14.648 -55.057 26.289 1.00 -0.79 \ ATOM 184 CD PRO L 28 15.535 -54.633 25.169 1.00 -0.79 \ ATOM 185 N LYS L 29 17.445 -54.887 28.187 1.00 -0.90 \ ATOM 186 CA LYS L 29 18.301 -55.496 29.242 1.00 -0.90 \ ATOM 187 C LYS L 29 17.485 -56.316 30.246 1.00 -0.90 \ ATOM 188 O LYS L 29 17.210 -57.491 30.004 1.00 -0.90 \ ATOM 189 CB LYS L 29 19.212 -54.476 29.970 1.00 -0.90 \ ATOM 190 CG LYS L 29 20.508 -54.182 29.238 1.00 -0.90 \ ATOM 191 CD LYS L 29 21.272 -53.027 29.872 1.00 -0.90 \ ATOM 192 CE LYS L 29 22.724 -52.988 29.390 1.00 -0.90 \ ATOM 193 NZ LYS L 29 22.833 -52.903 27.906 1.00 -0.90 \ ATOM 209 N ARG L 101 4.737 -43.702 28.056 0.50 0.00 \ ATOM 210 CA ARG L 101 3.909 -42.463 27.841 0.50 0.00 \ ATOM 211 C ARG L 101 2.476 -42.566 27.253 0.50 0.00 \ ATOM 212 O ARG L 101 2.217 -41.966 26.179 0.50 0.00 \ ATOM 213 CB ARG L 101 4.668 -41.527 26.937 0.50 0.00 \ ATOM 214 CG ARG L 101 4.031 -41.433 25.570 0.50 0.00 \ ATOM 215 CD ARG L 101 5.044 -40.997 24.573 0.50 0.00 \ ATOM 216 NE ARG L 101 4.502 -41.010 23.221 0.50 0.00 \ ATOM 217 CZ ARG L 101 5.126 -41.550 22.184 0.50 0.00 \ ATOM 218 NH1 ARG L 101 6.311 -42.128 22.347 0.50 0.00 \ ATOM 219 NH2 ARG L 101 4.559 -41.509 20.993 0.50 0.00 \ ATOM 220 OXT ARG L 101 1.518 -43.163 27.812 1.00 0.00 \ ATOM 221 N ARG L 101 2.710 -50.627 28.489 0.50 0.00 \ ATOM 222 CA ARG L 101 1.524 -50.722 27.591 0.50 0.00 \ ATOM 223 C ARG L 101 0.165 -50.728 28.301 0.50 0.00 \ ATOM 224 O ARG L 101 -0.552 -51.725 28.232 0.50 0.00 \ ATOM 225 CB ARG L 101 1.646 -51.975 26.728 0.50 0.00 \ ATOM 226 CG ARG L 101 2.574 -51.767 25.551 0.50 0.00 \ ATOM 227 CD ARG L 101 2.312 -52.764 24.468 0.50 0.00 \ ATOM 228 NE ARG L 101 2.513 -52.154 23.173 0.50 0.00 \ ATOM 229 CZ ARG L 101 1.864 -52.497 22.069 0.50 0.00 \ ATOM 230 NH1 ARG L 101 0.903 -53.399 22.102 0.50 0.00 \ ATOM 231 NH2 ARG L 101 2.158 -51.891 20.927 0.50 0.00 \ ATOM 232 OXT ARG L 101 -0.258 -49.760 28.941 0.50 0.00 \ """, "e5mt9L1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt9L1_csv", state=0, origin=1) cmd.zoom("e5mt9L1_csv", animate=-1)