cmd.read_pdbstr("""\ ATOM 1 N HIS N 5 2.211 -56.809 30.147 1.00 -0.03 \ ATOM 2 CA HIS N 5 0.924 -56.042 30.442 1.00 -0.03 \ ATOM 3 C HIS N 5 0.413 -55.262 29.186 1.00 -0.03 \ ATOM 4 O HIS N 5 0.931 -54.221 28.859 1.00 -0.03 \ ATOM 5 CB HIS N 5 1.108 -55.083 31.647 1.00 -0.03 \ ATOM 6 CG HIS N 5 2.377 -54.263 31.585 1.00 -0.03 \ ATOM 7 ND1 HIS N 5 2.530 -53.172 30.745 1.00 -0.03 \ ATOM 8 CD2 HIS N 5 3.557 -54.390 32.244 1.00 -0.03 \ ATOM 9 CE1 HIS N 5 3.744 -52.667 30.892 1.00 -0.03 \ ATOM 10 NE2 HIS N 5 4.389 -53.392 31.791 1.00 -0.03 \ ATOM 11 N LEU N 6 -0.611 -55.786 28.522 1.00 1.17 \ ATOM 12 CA LEU N 6 -1.139 -55.224 27.268 1.00 1.17 \ ATOM 13 C LEU N 6 -2.494 -54.677 27.536 1.00 1.17 \ ATOM 14 O LEU N 6 -3.393 -55.465 27.607 1.00 1.17 \ ATOM 15 CB LEU N 6 -1.262 -56.331 26.231 1.00 1.17 \ ATOM 16 CG LEU N 6 0.082 -56.827 25.697 1.00 1.17 \ ATOM 17 CD1 LEU N 6 -0.169 -57.997 24.788 1.00 1.17 \ ATOM 18 CD2 LEU N 6 0.829 -55.721 24.973 1.00 1.17 \ ATOM 19 N CYS N 7 -2.612 -53.357 27.750 1.00 1.69 \ ATOM 20 CA CYS N 7 -3.860 -52.688 28.116 1.00 1.69 \ ATOM 21 C CYS N 7 -4.328 -51.620 27.121 1.00 1.69 \ ATOM 22 O CYS N 7 -3.519 -51.028 26.473 1.00 1.69 \ ATOM 23 CB CYS N 7 -3.726 -52.070 29.498 1.00 1.69 \ ATOM 24 SG CYS N 7 -3.291 -53.324 30.730 1.00 1.69 \ ATOM 25 N GLY N 8 -5.640 -51.380 27.037 1.00 0.76 \ ATOM 26 CA GLY N 8 -6.247 -50.375 26.117 1.00 0.76 \ ATOM 27 C GLY N 8 -5.931 -50.584 24.642 1.00 0.76 \ ATOM 28 O GLY N 8 -5.993 -51.688 24.183 1.00 0.76 \ ATOM 29 N SER N 9 -5.481 -49.561 23.911 1.00 -0.47 \ ATOM 30 CA SER N 9 -5.200 -49.735 22.518 1.00 -0.47 \ ATOM 31 C SER N 9 -3.998 -50.645 22.271 1.00 -0.47 \ ATOM 32 O SER N 9 -3.933 -51.247 21.228 1.00 -0.47 \ ATOM 33 CB SER N 9 -4.969 -48.387 21.816 1.00 -0.47 \ ATOM 34 OG SER N 9 -3.922 -47.725 22.433 1.00 -0.47 \ ATOM 35 N HIS N 10 -3.106 -50.795 23.268 1.00 -0.23 \ ATOM 36 CA HIS N 10 -1.952 -51.753 23.161 1.00 -0.23 \ ATOM 37 C HIS N 10 -2.367 -53.211 23.002 1.00 -0.23 \ ATOM 38 O HIS N 10 -1.751 -53.964 22.263 1.00 -0.23 \ ATOM 39 CB HIS N 10 -0.991 -51.564 24.301 1.00 -0.23 \ ATOM 40 CG HIS N 10 -0.436 -50.186 24.372 1.00 -0.23 \ ATOM 41 ND1 HIS N 10 0.361 -49.657 23.382 1.00 -0.23 \ ATOM 42 CD2 HIS N 10 -0.643 -49.193 25.268 1.00 -0.23 \ ATOM 43 CE1 HIS N 10 0.635 -48.397 23.682 1.00 -0.23 \ ATOM 44 NE2 HIS N 10 0.075 -48.116 24.849 1.00 -0.23 \ ATOM 45 N LEU N 11 -3.484 -53.560 23.582 1.00 1.69 \ ATOM 46 CA LEU N 11 -4.002 -54.932 23.404 1.00 1.69 \ ATOM 47 C LEU N 11 -4.555 -55.150 22.002 1.00 1.69 \ ATOM 48 O LEU N 11 -4.283 -56.167 21.324 1.00 1.69 \ ATOM 49 CB LEU N 11 -5.045 -55.205 24.530 1.00 1.69 \ ATOM 50 CG LEU N 11 -5.727 -56.561 24.498 1.00 1.69 \ ATOM 51 CD1 LEU N 11 -4.755 -57.712 24.398 1.00 1.69 \ ATOM 52 CD2 LEU N 11 -6.613 -56.674 25.727 1.00 1.69 \ ATOM 53 N VAL N 12 -5.240 -54.123 21.485 1.00 0.76 \ ATOM 54 CA VAL N 12 -5.715 -54.150 20.091 1.00 0.76 \ ATOM 55 C VAL N 12 -4.545 -54.206 19.170 1.00 0.76 \ ATOM 56 O VAL N 12 -4.615 -54.931 18.226 1.00 0.76 \ ATOM 57 CB VAL N 12 -6.636 -52.941 19.785 1.00 0.76 \ ATOM 58 CG1 VAL N 12 -6.876 -52.760 18.317 1.00 0.76 \ ATOM 59 CG2 VAL N 12 -7.946 -53.126 20.514 1.00 0.76 \ ATOM 60 N GLU N 13 -3.468 -53.446 19.419 1.00 0.63 \ ATOM 61 CA GLU N 13 -2.275 -53.557 18.610 1.00 0.63 \ ATOM 62 C GLU N 13 -1.698 -54.998 18.579 1.00 0.63 \ ATOM 63 O GLU N 13 -1.323 -55.512 17.538 1.00 0.63 \ ATOM 64 CB GLU N 13 -1.161 -52.624 19.119 1.00 0.63 \ ATOM 65 CG GLU N 13 -1.514 -51.167 19.080 1.00 0.63 \ ATOM 66 CD GLU N 13 -0.524 -50.244 19.844 1.00 0.63 \ ATOM 67 OE1 GLU N 13 0.342 -50.679 20.689 1.00 0.63 \ ATOM 68 OE2 GLU N 13 -0.643 -49.033 19.595 1.00 0.63 \ ATOM 69 N ALA N 14 -1.626 -55.658 19.738 1.00 0.02 \ ATOM 70 CA ALA N 14 -1.110 -56.994 19.745 1.00 0.02 \ ATOM 71 C ALA N 14 -2.023 -57.983 18.985 1.00 0.02 \ ATOM 72 O ALA N 14 -1.564 -58.817 18.213 1.00 0.02 \ ATOM 73 CB ALA N 14 -0.853 -57.437 21.184 1.00 0.02 \ ATOM 74 N LEU N 15 -3.323 -57.826 19.153 1.00 1.69 \ ATOM 75 CA LEU N 15 -4.267 -58.609 18.373 1.00 1.69 \ ATOM 76 C LEU N 15 -4.090 -58.447 16.904 1.00 1.69 \ ATOM 77 O LEU N 15 -4.167 -59.424 16.177 1.00 1.69 \ ATOM 78 CB LEU N 15 -5.699 -58.242 18.729 1.00 1.69 \ ATOM 79 CG LEU N 15 -6.330 -58.874 19.941 1.00 1.69 \ ATOM 80 CD1 LEU N 15 -7.610 -58.159 20.366 1.00 1.69 \ ATOM 81 CD2 LEU N 15 -6.607 -60.364 19.645 1.00 1.69 \ ATOM 82 N TYR N 16 -3.877 -57.196 16.448 1.00 -0.21 \ ATOM 83 CA TYR N 16 -3.722 -56.971 15.056 1.00 -0.21 \ ATOM 84 C TYR N 16 -2.428 -57.621 14.588 1.00 -0.21 \ ATOM 85 O TYR N 16 -2.408 -58.176 13.502 1.00 -0.21 \ ATOM 86 CB TYR N 16 -3.701 -55.442 14.711 1.00 -0.21 \ ATOM 87 CG TYR N 16 -3.699 -55.238 13.197 1.00 -0.21 \ ATOM 88 CD1 TYR N 16 -4.884 -55.218 12.501 1.00 -0.21 \ ATOM 89 CD2 TYR N 16 -2.524 -55.035 12.507 1.00 -0.21 \ ATOM 90 CE1 TYR N 16 -4.883 -55.026 11.116 1.00 -0.21 \ ATOM 91 CE2 TYR N 16 -2.502 -54.849 11.116 1.00 -0.21 \ ATOM 92 CZ TYR N 16 -3.696 -54.823 10.447 1.00 -0.21 \ ATOM 93 OH TYR N 16 -3.736 -54.679 9.077 1.00 -0.21 \ ATOM 94 N LEU N 17 -1.348 -57.571 15.390 1.00 -0.24 \ ATOM 95 CA LEU N 17 -0.048 -58.195 14.996 1.00 -0.24 \ ATOM 96 C LEU N 17 -0.208 -59.714 14.756 1.00 -0.24 \ ATOM 97 O LEU N 17 0.120 -60.246 13.707 1.00 -0.24 \ ATOM 98 CB LEU N 17 0.980 -57.970 16.096 1.00 -0.24 \ ATOM 99 CG LEU N 17 2.312 -58.728 16.085 1.00 -0.24 \ ATOM 100 CD1 LEU N 17 3.044 -58.368 14.805 1.00 -0.24 \ ATOM 101 CD2 LEU N 17 3.186 -58.321 17.246 1.00 -0.24 \ ATOM 102 N VAL N 18 -0.814 -60.370 15.703 1.00 0.30 \ ATOM 103 CA VAL N 18 -1.056 -61.834 15.589 1.00 0.30 \ ATOM 104 C VAL N 18 -2.218 -62.271 14.640 1.00 0.30 \ ATOM 105 O VAL N 18 -2.030 -63.213 13.875 1.00 0.30 \ ATOM 106 CB VAL N 18 -1.234 -62.435 16.987 1.00 0.30 \ ATOM 107 CG1 VAL N 18 -1.410 -63.947 16.922 1.00 0.30 \ ATOM 108 CG2 VAL N 18 -0.022 -62.064 17.827 1.00 0.30 \ ATOM 109 N CYS N 19 -3.337 -61.540 14.622 1.00 1.69 \ ATOM 110 CA CYS N 19 -4.584 -61.919 13.900 1.00 1.69 \ ATOM 111 C CYS N 19 -4.982 -60.976 12.744 1.00 1.69 \ ATOM 112 O CYS N 19 -6.038 -61.199 12.109 1.00 1.69 \ ATOM 113 CB CYS N 19 -5.795 -61.866 14.830 1.00 1.69 \ ATOM 114 SG CYS N 19 -5.648 -62.855 16.281 1.00 1.69 \ ATOM 115 N GLY N 20 -4.181 -59.956 12.436 1.00 -0.12 \ ATOM 116 CA GLY N 20 -4.637 -58.946 11.473 1.00 -0.12 \ ATOM 117 C GLY N 20 -4.859 -59.419 10.059 1.00 -0.12 \ ATOM 118 O GLY N 20 -5.488 -58.707 9.272 1.00 -0.12 \ ATOM 119 N GLU N 21 -4.260 -60.556 9.702 1.00 0.18 \ ATOM 120 CA GLU N 21 -4.429 -61.141 8.363 1.00 0.18 \ ATOM 121 C GLU N 21 -5.600 -62.147 8.365 1.00 0.18 \ ATOM 122 O GLU N 21 -6.066 -62.508 7.321 1.00 0.18 \ ATOM 123 CB GLU N 21 -3.142 -61.863 7.898 1.00 0.18 \ ATOM 124 CG GLU N 21 -1.896 -61.009 7.700 1.00 0.18 \ ATOM 125 CD GLU N 21 -0.692 -61.776 7.123 1.00 0.18 \ ATOM 126 OE1 GLU N 21 0.221 -62.134 7.876 1.00 0.18 \ ATOM 127 OE2 GLU N 21 -0.618 -62.001 5.886 1.00 0.18 \ ATOM 128 N ARG N 22 -6.044 -62.615 9.524 1.00 -0.58 \ ATOM 129 CA ARG N 22 -7.193 -63.517 9.647 1.00 -0.58 \ ATOM 130 C ARG N 22 -8.467 -62.838 10.073 1.00 -0.58 \ ATOM 131 O ARG N 22 -9.543 -63.329 9.773 1.00 -0.58 \ ATOM 132 CB ARG N 22 -6.929 -64.634 10.696 1.00 -0.58 \ ATOM 133 CG ARG N 22 -5.740 -65.555 10.403 1.00 -0.58 \ ATOM 134 CD ARG N 22 -5.693 -66.024 8.950 1.00 -0.58 \ ATOM 135 NE ARG N 22 -5.003 -67.316 8.827 1.00 -0.58 \ ATOM 136 CZ ARG N 22 -5.576 -68.517 8.641 1.00 -0.58 \ ATOM 137 NH1 ARG N 22 -6.902 -68.662 8.512 1.00 -0.58 \ ATOM 138 NH2 ARG N 22 -4.801 -69.607 8.571 1.00 -0.58 \ ATOM 139 N GLY N 23 -8.352 -61.779 10.862 1.00 1.69 \ ATOM 140 CA GLY N 23 -9.489 -61.219 11.560 1.00 1.69 \ ATOM 141 C GLY N 23 -9.683 -61.615 13.000 1.00 1.69 \ ATOM 142 O GLY N 23 -9.137 -62.597 13.495 1.00 1.69 \ ATOM 143 N PHE N 24 -10.395 -60.780 13.706 1.00 1.16 \ ATOM 144 CA PHE N 24 -10.693 -61.007 15.123 1.00 1.16 \ ATOM 145 C PHE N 24 -11.872 -60.184 15.601 1.00 1.16 \ ATOM 146 O PHE N 24 -12.237 -59.179 14.954 1.00 1.16 \ ATOM 147 CB PHE N 24 -9.449 -60.725 16.003 1.00 1.16 \ ATOM 148 CG PHE N 24 -8.975 -59.291 15.976 1.00 1.16 \ ATOM 149 CD1 PHE N 24 -8.134 -58.869 14.977 1.00 1.16 \ ATOM 150 CD2 PHE N 24 -9.343 -58.405 16.952 1.00 1.16 \ ATOM 151 CE1 PHE N 24 -7.664 -57.550 14.974 1.00 1.16 \ ATOM 152 CE2 PHE N 24 -8.882 -57.108 16.938 1.00 1.16 \ ATOM 153 CZ PHE N 24 -8.054 -56.698 15.941 1.00 1.16 \ ATOM 154 N PHE N 25 -12.467 -60.653 16.696 1.00 0.51 \ ATOM 155 CA PHE N 25 -13.379 -59.906 17.520 1.00 0.51 \ ATOM 156 C PHE N 25 -12.591 -59.396 18.698 1.00 0.51 \ ATOM 157 O PHE N 25 -11.684 -60.103 19.234 1.00 0.51 \ ATOM 158 CB PHE N 25 -14.582 -60.752 18.042 1.00 0.51 \ ATOM 159 CG PHE N 25 -15.649 -61.007 17.004 1.00 0.51 \ ATOM 160 CD1 PHE N 25 -15.473 -62.002 16.035 1.00 0.51 \ ATOM 161 CD2 PHE N 25 -16.832 -60.271 16.994 1.00 0.51 \ ATOM 162 CE1 PHE N 25 -16.443 -62.233 15.047 1.00 0.51 \ ATOM 163 CE2 PHE N 25 -17.811 -60.506 16.020 1.00 0.51 \ ATOM 164 CZ PHE N 25 -17.613 -61.486 15.047 1.00 0.51 \ ATOM 165 N TYR N 26 -12.933 -58.170 19.084 1.00 -0.23 \ ATOM 166 CA TYR N 26 -12.497 -57.546 20.311 1.00 -0.23 \ ATOM 167 C TYR N 26 -13.762 -57.284 21.063 1.00 -0.23 \ ATOM 168 O TYR N 26 -14.533 -56.491 20.659 1.00 -0.23 \ ATOM 169 CB TYR N 26 -11.686 -56.259 20.041 1.00 -0.23 \ ATOM 170 CG TYR N 26 -11.295 -55.468 21.271 1.00 -0.23 \ ATOM 171 CD1 TYR N 26 -10.343 -55.934 22.181 1.00 -0.23 \ ATOM 172 CD2 TYR N 26 -11.927 -54.270 21.551 1.00 -0.23 \ ATOM 173 CE1 TYR N 26 -10.066 -55.209 23.338 1.00 -0.23 \ ATOM 174 CE2 TYR N 26 -11.597 -53.498 22.647 1.00 -0.23 \ ATOM 175 CZ TYR N 26 -10.677 -53.991 23.562 1.00 -0.23 \ ATOM 176 OH TYR N 26 -10.408 -53.220 24.677 1.00 -0.23 \ ATOM 177 N THR N 27 -13.915 -57.978 22.209 1.00 -0.98 \ ATOM 178 CA THR N 27 -15.070 -57.953 23.104 1.00 -0.98 \ ATOM 179 C THR N 27 -14.508 -57.783 24.505 1.00 -0.98 \ ATOM 180 O THR N 27 -14.083 -58.779 25.116 1.00 -0.98 \ ATOM 181 CB THR N 27 -15.824 -59.315 23.073 1.00 -0.98 \ ATOM 182 OG1 THR N 27 -16.174 -59.656 21.724 1.00 -0.98 \ ATOM 183 CG2 THR N 27 -17.085 -59.254 23.889 1.00 -0.98 \ ATOM 184 N PRO N 28 -14.426 -56.536 24.982 1.00 -0.78 \ ATOM 185 CA PRO N 28 -13.859 -56.297 26.265 1.00 -0.78 \ ATOM 186 C PRO N 28 -14.707 -56.771 27.440 1.00 -0.78 \ ATOM 187 O PRO N 28 -14.113 -57.255 28.382 1.00 -0.78 \ ATOM 188 CB PRO N 28 -13.708 -54.778 26.305 1.00 -0.78 \ ATOM 189 CG PRO N 28 -14.607 -54.258 25.230 1.00 -0.78 \ ATOM 190 CD PRO N 28 -14.474 -55.292 24.195 1.00 -0.78 \ ATOM 191 N LYS N 29 -16.041 -56.612 27.414 1.00 -0.90 \ ATOM 192 CA LYS N 29 -16.875 -56.988 28.586 1.00 -0.90 \ ATOM 193 C LYS N 29 -17.518 -58.342 28.367 1.00 -0.90 \ ATOM 194 O LYS N 29 -16.830 -59.303 28.016 1.00 -0.90 \ ATOM 195 CB LYS N 29 -17.930 -55.916 28.918 1.00 -0.90 \ ATOM 198 N ARG N 103 -3.685 -43.986 28.721 1.00 -1.45 \ ATOM 199 CA ARG N 103 -4.600 -45.056 28.175 1.00 -1.45 \ ATOM 200 C ARG N 103 -3.935 -46.478 28.090 1.00 -1.45 \ ATOM 201 O ARG N 103 -3.265 -46.906 27.138 1.00 -1.45 \ ATOM 202 CB ARG N 103 -5.268 -44.538 26.866 1.00 -1.45 \ ATOM 203 CG ARG N 103 -5.572 -45.514 25.735 1.00 -1.45 \ ATOM 204 CD ARG N 103 -6.343 -44.800 24.624 1.00 -1.45 \ ATOM 205 NE ARG N 103 -5.814 -45.148 23.302 1.00 -1.45 \ ATOM 206 CZ ARG N 103 -5.759 -44.358 22.217 1.00 -1.45 \ ATOM 207 NH1 ARG N 103 -6.174 -43.092 22.212 1.00 -1.45 \ ATOM 208 NH2 ARG N 103 -5.245 -44.852 21.102 1.00 -1.45 \ ATOM 209 OXT ARG N 103 -4.050 -47.266 29.046 1.00 -1.45 \ ATOM 223 N ARG N 101 2.710 -50.627 28.489 0.50 0.00 \ ATOM 224 CA ARG N 101 1.524 -50.722 27.591 0.50 0.00 \ ATOM 225 C ARG N 101 0.165 -50.728 28.301 0.50 0.00 \ ATOM 226 O ARG N 101 -0.552 -51.725 28.232 0.50 0.00 \ ATOM 227 CB ARG N 101 1.646 -51.975 26.728 0.50 0.00 \ ATOM 228 CG ARG N 101 2.574 -51.767 25.551 0.50 0.00 \ ATOM 229 CD ARG N 101 2.312 -52.764 24.468 0.50 0.00 \ ATOM 230 NE ARG N 101 2.513 -52.154 23.173 0.50 0.00 \ ATOM 231 CZ ARG N 101 1.864 -52.497 22.069 0.50 0.00 \ ATOM 232 NH1 ARG N 101 0.903 -53.399 22.102 0.50 0.00 \ ATOM 233 NH2 ARG N 101 2.158 -51.891 20.927 0.50 0.00 \ ATOM 234 OXT ARG N 101 -0.258 -49.760 28.941 0.50 0.00 \ """, "e5mt9N1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt9N1_csv", state=0, origin=1) cmd.zoom("e5mt9N1_csv", animate=-1)