cmd.read_pdbstr("""\ ATOM 1 N GLY a 1 -48.636 -41.150 42.137 1.00 0.33 \ ATOM 2 CA GLY a 1 -48.906 -39.879 41.381 1.00 0.33 \ ATOM 3 C GLY a 1 -47.540 -39.244 41.125 1.00 0.33 \ ATOM 4 O GLY a 1 -46.646 -39.259 41.987 1.00 0.33 \ ATOM 5 N ILE a 2 -47.386 -38.698 39.947 1.00 0.44 \ ATOM 6 CA ILE a 2 -46.102 -38.177 39.490 1.00 0.44 \ ATOM 7 C ILE a 2 -45.624 -37.026 40.346 1.00 0.44 \ ATOM 8 O ILE a 2 -44.439 -36.896 40.578 1.00 0.44 \ ATOM 9 CB ILE a 2 -46.151 -37.806 37.970 1.00 0.44 \ ATOM 10 CG1 ILE a 2 -44.714 -37.570 37.457 1.00 0.44 \ ATOM 11 CG2 ILE a 2 -47.179 -36.692 37.681 1.00 0.44 \ ATOM 12 CD1 ILE a 2 -44.601 -37.399 35.946 1.00 0.44 \ ATOM 13 N VAL a 3 -46.547 -36.192 40.838 1.00 1.08 \ ATOM 14 CA VAL a 3 -46.116 -35.001 41.564 1.00 1.08 \ ATOM 15 C VAL a 3 -45.515 -35.437 42.895 1.00 1.08 \ ATOM 16 O VAL a 3 -44.466 -35.014 43.287 1.00 1.08 \ ATOM 17 CB VAL a 3 -47.267 -34.031 41.853 1.00 1.08 \ ATOM 18 CG1 VAL a 3 -46.815 -32.949 42.849 1.00 1.08 \ ATOM 19 CG2 VAL a 3 -47.795 -33.473 40.551 1.00 1.08 \ ATOM 20 N GLU a 4 -46.234 -36.267 43.595 1.00 0.21 \ ATOM 21 CA GLU a 4 -45.757 -36.823 44.893 1.00 0.21 \ ATOM 22 C GLU a 4 -44.361 -37.497 44.736 1.00 0.21 \ ATOM 23 O GLU a 4 -43.412 -37.157 45.433 1.00 0.21 \ ATOM 24 CB GLU a 4 -46.790 -37.834 45.401 1.00 0.21 \ ATOM 25 CG GLU a 4 -48.171 -37.214 45.726 1.00 0.21 \ ATOM 26 CD GLU a 4 -49.033 -36.738 44.519 1.00 0.21 \ ATOM 27 OE1 GLU a 4 -49.015 -37.367 43.425 1.00 0.21 \ ATOM 28 OE2 GLU a 4 -49.738 -35.696 44.669 1.00 0.21 \ ATOM 29 N GLN a 5 -44.220 -38.376 43.737 1.00 0.00 \ ATOM 30 CA GLN a 5 -42.921 -39.025 43.463 1.00 0.00 \ ATOM 31 C GLN a 5 -41.828 -38.079 42.983 1.00 0.00 \ ATOM 32 O GLN a 5 -40.740 -38.045 43.549 1.00 0.00 \ ATOM 33 CB GLN a 5 -43.052 -40.155 42.436 1.00 0.00 \ ATOM 34 CG GLN a 5 -41.799 -41.017 42.403 1.00 0.00 \ ATOM 35 CD GLN a 5 -41.911 -42.235 41.517 1.00 0.00 \ ATOM 36 OE1 GLN a 5 -42.781 -42.317 40.636 1.00 0.00 \ ATOM 37 NE2 GLN a 5 -40.999 -43.182 41.722 1.00 0.00 \ ATOM 38 N CYS a 6 -42.118 -37.291 41.948 1.00 1.70 \ ATOM 39 CA CYS a 6 -41.081 -36.620 41.206 1.00 1.70 \ ATOM 40 C CYS a 6 -40.889 -35.144 41.563 1.00 1.70 \ ATOM 41 O CYS a 6 -39.964 -34.501 41.057 1.00 1.70 \ ATOM 42 CB CYS a 6 -41.366 -36.824 39.728 1.00 1.70 \ ATOM 43 SG CYS a 6 -41.321 -38.580 39.170 1.00 1.70 \ ATOM 44 N CYS a 7 -41.699 -34.608 42.483 1.00 1.70 \ ATOM 45 CA CYS a 7 -41.395 -33.273 43.035 1.00 1.70 \ ATOM 46 C CYS a 7 -40.826 -33.296 44.468 1.00 1.70 \ ATOM 47 O CYS a 7 -40.404 -32.252 44.966 1.00 1.70 \ ATOM 48 CB CYS a 7 -42.610 -32.349 43.018 1.00 1.70 \ ATOM 49 SG CYS a 7 -43.356 -32.236 41.386 1.00 1.70 \ ATOM 50 N THR a 8 -40.792 -34.462 45.081 1.00 -0.68 \ ATOM 51 CA THR a 8 -40.037 -34.687 46.317 1.00 -0.68 \ ATOM 52 C THR a 8 -38.626 -35.326 46.124 1.00 -0.68 \ ATOM 53 O THR a 8 -37.746 -35.174 46.951 1.00 -0.68 \ ATOM 54 CB THR a 8 -40.849 -35.568 47.264 1.00 -0.68 \ ATOM 55 OG1 THR a 8 -40.978 -36.848 46.680 1.00 -0.68 \ ATOM 56 CG2 THR a 8 -42.233 -34.992 47.502 1.00 -0.68 \ ATOM 57 N SER a 9 -38.428 -36.091 45.060 1.00 -0.80 \ ATOM 58 CA SER a 9 -37.101 -36.634 44.739 1.00 -0.80 \ ATOM 59 C SER a 9 -36.908 -36.493 43.245 1.00 -0.80 \ ATOM 60 O SER a 9 -37.873 -36.331 42.494 1.00 -0.80 \ ATOM 61 CB SER a 9 -36.970 -38.104 45.153 1.00 -0.80 \ ATOM 62 OG SER a 9 -37.094 -38.198 46.557 1.00 -0.80 \ ATOM 63 N ILE a 10 -35.660 -36.477 42.819 1.00 -0.79 \ ATOM 64 CA ILE a 10 -35.407 -36.351 41.379 1.00 -0.79 \ ATOM 65 C ILE a 10 -35.644 -37.739 40.739 1.00 -0.79 \ ATOM 66 O ILE a 10 -34.907 -38.691 41.044 1.00 -0.79 \ ATOM 67 CB ILE a 10 -34.015 -35.826 41.126 1.00 -0.79 \ ATOM 68 CG1 ILE a 10 -33.856 -34.450 41.776 1.00 -0.79 \ ATOM 69 CG2 ILE a 10 -33.738 -35.750 39.650 1.00 -0.79 \ ATOM 70 CD1 ILE a 10 -32.417 -33.966 41.817 1.00 -0.79 \ ATOM 71 N CYS a 11 -36.664 -37.833 39.896 1.00 1.70 \ ATOM 72 CA CYS a 11 -36.948 -39.066 39.148 1.00 1.70 \ ATOM 73 C CYS a 11 -35.967 -39.348 38.016 1.00 1.70 \ ATOM 74 O CYS a 11 -35.539 -38.403 37.365 1.00 1.70 \ ATOM 75 CB CYS a 11 -38.359 -39.046 38.609 1.00 1.70 \ ATOM 76 SG CYS a 11 -39.587 -39.297 39.955 1.00 1.70 \ ATOM 77 N SER a 12 -35.640 -40.645 37.755 1.00 -0.16 \ ATOM 78 CA SER a 12 -34.680 -40.983 36.745 1.00 -0.16 \ ATOM 79 C SER a 12 -35.505 -41.015 35.533 1.00 -0.16 \ ATOM 80 O SER a 12 -36.737 -40.953 35.591 1.00 -0.16 \ ATOM 81 CB SER a 12 -34.096 -42.411 36.986 1.00 -0.16 \ ATOM 82 OG SER a 12 -35.141 -43.363 36.795 1.00 -0.16 \ ATOM 83 N LEU a 13 -34.878 -41.160 34.373 1.00 -0.38 \ ATOM 84 CA LEU a 13 -35.670 -41.307 33.188 1.00 -0.38 \ ATOM 85 C LEU a 13 -36.573 -42.562 33.200 1.00 -0.38 \ ATOM 86 O LEU a 13 -37.670 -42.562 32.641 1.00 -0.38 \ ATOM 87 CB LEU a 13 -34.794 -41.309 31.907 1.00 -0.38 \ ATOM 88 CG LEU a 13 -34.113 -40.004 31.562 1.00 -0.38 \ ATOM 89 CD1 LEU a 13 -33.520 -40.066 30.157 1.00 -0.38 \ ATOM 90 CD2 LEU a 13 -35.051 -38.820 31.733 1.00 -0.38 \ ATOM 91 N TYR a 14 -36.095 -43.634 33.839 1.00 -1.24 \ ATOM 92 CA TYR a 14 -36.855 -44.887 33.953 1.00 -1.24 \ ATOM 93 C TYR a 14 -38.173 -44.615 34.675 1.00 -1.24 \ ATOM 94 O TYR a 14 -39.232 -45.068 34.228 1.00 -1.24 \ ATOM 95 CB TYR a 14 -36.001 -45.969 34.696 1.00 -1.24 \ ATOM 96 CG TYR a 14 -34.863 -46.422 33.796 1.00 -1.24 \ ATOM 97 CD1 TYR a 14 -33.611 -45.796 33.822 1.00 -1.24 \ ATOM 98 CD2 TYR a 14 -35.053 -47.447 32.873 1.00 -1.24 \ ATOM 99 CE1 TYR a 14 -32.581 -46.162 32.949 1.00 -1.24 \ ATOM 100 CE2 TYR a 14 -34.007 -47.827 32.015 1.00 -1.24 \ ATOM 101 CZ TYR a 14 -32.786 -47.166 32.051 1.00 -1.24 \ ATOM 102 OH TYR a 14 -31.755 -47.560 31.187 1.00 -1.24 \ ATOM 103 N GLN a 15 -38.077 -43.875 35.769 1.00 -0.57 \ ATOM 104 CA GLN a 15 -39.249 -43.536 36.610 1.00 -0.57 \ ATOM 105 C GLN a 15 -40.266 -42.686 35.881 1.00 -0.57 \ ATOM 106 O GLN a 15 -41.479 -42.990 35.925 1.00 -0.57 \ ATOM 107 CB GLN a 15 -38.768 -42.850 37.882 1.00 -0.57 \ ATOM 108 CG GLN a 15 -38.116 -43.801 38.883 1.00 -0.57 \ ATOM 109 CD GLN a 15 -37.473 -43.098 40.099 1.00 -0.57 \ ATOM 110 OE1 GLN a 15 -36.564 -42.296 39.964 1.00 -0.57 \ ATOM 111 NE2 GLN a 15 -37.932 -43.443 41.299 1.00 -0.57 \ ATOM 112 N LEU a 16 -39.782 -41.646 35.145 1.00 0.77 \ ATOM 113 CA LEU a 16 -40.655 -40.800 34.361 1.00 0.77 \ ATOM 114 C LEU a 16 -41.341 -41.606 33.306 1.00 0.77 \ ATOM 115 O LEU a 16 -42.479 -41.361 32.972 1.00 0.77 \ ATOM 116 CB LEU a 16 -39.894 -39.650 33.675 1.00 0.77 \ ATOM 117 CG LEU a 16 -39.386 -38.478 34.506 1.00 0.77 \ ATOM 118 CD1 LEU a 16 -38.489 -37.545 33.680 1.00 0.77 \ ATOM 119 CD2 LEU a 16 -40.545 -37.699 35.089 1.00 0.77 \ ATOM 120 N GLU a 17 -40.624 -42.567 32.699 1.00 0.32 \ ATOM 121 CA GLU a 17 -41.197 -43.325 31.611 1.00 0.32 \ ATOM 122 C GLU a 17 -42.377 -44.198 32.096 1.00 0.32 \ ATOM 123 O GLU a 17 -43.255 -44.585 31.311 1.00 0.32 \ ATOM 124 CB GLU a 17 -40.101 -44.145 30.919 1.00 0.32 \ ATOM 125 CG GLU a 17 -40.554 -45.048 29.819 1.00 0.32 \ ATOM 126 CD GLU a 17 -39.349 -45.714 29.187 1.00 0.32 \ ATOM 127 OE1 GLU a 17 -38.689 -46.507 29.916 1.00 0.32 \ ATOM 128 OE2 GLU a 17 -39.098 -45.411 27.992 1.00 0.32 \ ATOM 129 N ASN a 18 -42.398 -44.455 33.393 1.00 -0.96 \ ATOM 130 CA ASN a 18 -43.549 -45.086 34.050 1.00 -0.96 \ ATOM 131 C ASN a 18 -44.845 -44.364 33.872 1.00 -0.96 \ ATOM 132 O ASN a 18 -45.884 -45.000 33.930 1.00 -0.96 \ ATOM 133 CB ASN a 18 -43.313 -45.295 35.559 1.00 -0.96 \ ATOM 134 CG ASN a 18 -43.534 -46.698 35.946 1.00 -0.96 \ ATOM 135 OD1 ASN a 18 -43.088 -47.594 35.213 1.00 -0.96 \ ATOM 136 ND2 ASN a 18 -44.212 -46.939 37.078 1.00 -0.96 \ ATOM 137 N TYR a 19 -44.793 -43.039 33.622 1.00 1.17 \ ATOM 138 CA TYR a 19 -45.980 -42.275 33.318 1.00 1.17 \ ATOM 139 C TYR a 19 -46.338 -42.097 31.852 1.00 1.17 \ ATOM 140 O TYR a 19 -47.319 -41.421 31.570 1.00 1.17 \ ATOM 141 CB TYR a 19 -45.915 -40.917 34.066 1.00 1.17 \ ATOM 142 CG TYR a 19 -45.698 -41.124 35.517 1.00 1.17 \ ATOM 143 CD1 TYR a 19 -46.780 -41.433 36.353 1.00 1.17 \ ATOM 144 CD2 TYR a 19 -44.435 -41.063 36.081 1.00 1.17 \ ATOM 145 CE1 TYR a 19 -46.589 -41.659 37.699 1.00 1.17 \ ATOM 146 CE2 TYR a 19 -44.248 -41.293 37.438 1.00 1.17 \ ATOM 147 CZ TYR a 19 -45.344 -41.578 38.234 1.00 1.17 \ ATOM 148 OH TYR a 19 -45.155 -41.777 39.573 1.00 1.17 \ ATOM 149 N CYS a 20 -45.633 -42.729 30.902 1.00 1.70 \ ATOM 150 CA CYS a 20 -46.049 -42.578 29.458 1.00 1.70 \ ATOM 151 C CYS a 20 -47.232 -43.498 29.163 1.00 1.70 \ ATOM 152 O CYS a 20 -47.469 -44.431 29.927 1.00 1.70 \ ATOM 153 CB CYS a 20 -44.911 -42.951 28.501 1.00 1.70 \ ATOM 154 SG CYS a 20 -43.333 -42.114 28.869 1.00 1.70 \ ATOM 155 N ASN a 21 -47.945 -43.253 28.050 1.00 0.17 \ ATOM 156 CA ASN a 21 -48.990 -44.183 27.589 1.00 0.17 \ ATOM 157 C ASN a 21 -48.318 -45.440 27.040 1.00 0.17 \ ATOM 158 O ASN a 21 -49.032 -46.444 26.983 1.00 0.17 \ ATOM 159 CB ASN a 21 -49.840 -43.631 26.432 1.00 0.17 \ ATOM 160 CG ASN a 21 -50.543 -42.346 26.754 1.00 0.17 \ ATOM 161 OD1 ASN a 21 -50.710 -41.487 25.872 1.00 0.17 \ ATOM 162 ND2 ASN a 21 -51.000 -42.210 27.996 1.00 0.17 \ ATOM 163 OXT ASN a 21 -47.134 -45.447 26.592 1.00 0.17 \ """, "e5mt9a1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt9a1_csv", state=0, origin=1) cmd.zoom("e5mt9a1_csv", animate=-1)