cmd.read_pdbstr("""\ ATOM 1 N PHE X 1 -41.026 -22.477 50.457 1.00 -1.00 \ ATOM 2 CA PHE X 1 -39.836 -22.442 49.534 1.00 -1.00 \ ATOM 3 C PHE X 1 -40.274 -22.305 48.107 1.00 -1.00 \ ATOM 4 O PHE X 1 -39.801 -23.083 47.249 1.00 -1.00 \ ATOM 5 CB PHE X 1 -38.966 -23.707 49.618 1.00 -1.00 \ ATOM 6 N VAL X 2 -41.180 -21.348 47.850 1.00 -1.00 \ ATOM 7 CA VAL X 2 -41.419 -20.861 46.475 1.00 -1.00 \ ATOM 8 C VAL X 2 -40.308 -19.844 46.163 1.00 -1.00 \ ATOM 9 O VAL X 2 -40.278 -18.787 46.817 1.00 -1.00 \ ATOM 10 CB VAL X 2 -42.810 -20.178 46.305 1.00 -1.00 \ ATOM 11 CG1 VAL X 2 -42.950 -19.589 44.892 1.00 -1.00 \ ATOM 12 CG2 VAL X 2 -43.944 -21.161 46.586 1.00 -1.00 \ ATOM 13 N ASN X 3 -39.391 -20.143 45.227 1.00 -0.47 \ ATOM 14 CA ASN X 3 -38.460 -19.085 44.807 1.00 -0.47 \ ATOM 15 C ASN X 3 -39.123 -18.156 43.813 1.00 -0.47 \ ATOM 16 O ASN X 3 -39.401 -18.565 42.673 1.00 -0.47 \ ATOM 17 CB ASN X 3 -37.217 -19.557 44.140 1.00 -0.47 \ ATOM 18 CG ASN X 3 -36.382 -18.383 43.691 1.00 -0.47 \ ATOM 19 OD1 ASN X 3 -36.399 -17.968 42.515 1.00 -0.47 \ ATOM 20 ND2 ASN X 3 -35.715 -17.762 44.648 1.00 -0.47 \ ATOM 21 N GLN X 4 -39.272 -16.895 44.195 1.00 0.23 \ ATOM 22 CA GLN X 4 -40.097 -15.937 43.436 1.00 0.23 \ ATOM 23 C GLN X 4 -39.536 -15.557 42.077 1.00 0.23 \ ATOM 24 O GLN X 4 -40.295 -15.281 41.152 1.00 0.23 \ ATOM 25 CB GLN X 4 -40.399 -14.672 44.254 1.00 0.23 \ ATOM 26 CG GLN X 4 -41.321 -14.936 45.448 1.00 0.23 \ ATOM 27 CD GLN X 4 -42.217 -13.747 45.841 1.00 0.23 \ ATOM 28 OE1 GLN X 4 -41.823 -12.567 45.726 1.00 0.23 \ ATOM 29 NE2 GLN X 4 -43.434 -14.060 46.326 1.00 0.23 \ ATOM 30 N HIS X 5 -38.228 -15.548 41.918 1.00 -0.04 \ ATOM 31 CA HIS X 5 -37.671 -15.229 40.591 1.00 -0.04 \ ATOM 32 C HIS X 5 -37.969 -16.348 39.539 1.00 -0.04 \ ATOM 33 O HIS X 5 -38.273 -16.027 38.409 1.00 -0.04 \ ATOM 34 CB HIS X 5 -36.165 -14.989 40.649 1.00 -0.04 \ ATOM 35 CG HIS X 5 -35.602 -14.458 39.359 1.00 -0.04 \ ATOM 36 ND1 HIS X 5 -35.817 -13.163 38.932 1.00 -0.04 \ ATOM 37 CD2 HIS X 5 -34.827 -15.040 38.423 1.00 -0.04 \ ATOM 38 CE1 HIS X 5 -35.214 -12.976 37.771 1.00 -0.04 \ ATOM 39 NE2 HIS X 5 -34.583 -14.094 37.453 1.00 -0.04 \ ATOM 40 N LEU X 6 -37.861 -17.620 39.936 1.00 1.15 \ ATOM 41 CA LEU X 6 -38.249 -18.747 39.110 1.00 1.15 \ ATOM 42 C LEU X 6 -39.747 -18.729 38.813 1.00 1.15 \ ATOM 43 O LEU X 6 -40.133 -18.993 37.668 1.00 1.15 \ ATOM 44 CB LEU X 6 -37.786 -20.078 39.704 1.00 1.15 \ ATOM 45 CG LEU X 6 -36.257 -20.268 39.911 1.00 1.15 \ ATOM 46 CD1 LEU X 6 -35.982 -21.679 40.435 1.00 1.15 \ ATOM 47 CD2 LEU X 6 -35.457 -19.908 38.676 1.00 1.15 \ ATOM 48 N CYS X 7 -40.585 -18.417 39.793 1.00 1.70 \ ATOM 49 CA CYS X 7 -42.011 -18.323 39.592 1.00 1.70 \ ATOM 50 C CYS X 7 -42.371 -17.234 38.579 1.00 1.70 \ ATOM 51 O CYS X 7 -43.271 -17.374 37.702 1.00 1.70 \ ATOM 52 CB CYS X 7 -42.712 -18.046 40.922 1.00 1.70 \ ATOM 53 SG CYS X 7 -44.516 -17.841 40.832 1.00 1.70 \ ATOM 54 N GLY X 8 -41.706 -16.106 38.697 1.00 0.71 \ ATOM 55 CA GLY X 8 -41.927 -15.028 37.765 1.00 0.71 \ ATOM 56 C GLY X 8 -41.681 -15.467 36.340 1.00 0.71 \ ATOM 57 O GLY X 8 -42.451 -15.100 35.459 1.00 0.71 \ ATOM 58 N SER X 9 -40.684 -16.322 36.118 1.00 -0.48 \ ATOM 59 CA SER X 9 -40.398 -16.814 34.791 1.00 -0.48 \ ATOM 60 C SER X 9 -41.584 -17.650 34.227 1.00 -0.48 \ ATOM 61 O SER X 9 -41.957 -17.468 33.098 1.00 -0.48 \ ATOM 62 CB SER X 9 -39.132 -17.609 34.790 1.00 -0.48 \ ATOM 63 OG SER X 9 -39.027 -18.247 33.605 1.00 -0.48 \ ATOM 64 N HIS X 10 -42.197 -18.513 35.041 1.00 -0.23 \ ATOM 65 CA HIS X 10 -43.418 -19.174 34.673 1.00 -0.23 \ ATOM 66 C HIS X 10 -44.546 -18.178 34.437 1.00 -0.23 \ ATOM 67 O HIS X 10 -45.416 -18.370 33.549 1.00 -0.23 \ ATOM 68 CB HIS X 10 -43.820 -20.214 35.727 1.00 -0.23 \ ATOM 69 CG HIS X 10 -42.850 -21.367 35.831 1.00 -0.23 \ ATOM 70 ND1 HIS X 10 -42.987 -22.495 35.083 1.00 -0.23 \ ATOM 71 CD2 HIS X 10 -41.706 -21.530 36.522 1.00 -0.23 \ ATOM 72 CE1 HIS X 10 -41.971 -23.314 35.308 1.00 -0.23 \ ATOM 73 NE2 HIS X 10 -41.204 -22.777 36.226 1.00 -0.23 \ ATOM 74 N LEU X 11 -44.625 -17.136 35.231 1.00 1.70 \ ATOM 75 CA LEU X 11 -45.771 -16.248 35.089 1.00 1.70 \ ATOM 76 C LEU X 11 -45.727 -15.482 33.771 1.00 1.70 \ ATOM 77 O LEU X 11 -46.739 -15.267 33.125 1.00 1.70 \ ATOM 78 CB LEU X 11 -45.801 -15.204 36.213 1.00 1.70 \ ATOM 79 CG LEU X 11 -46.166 -15.717 37.561 1.00 1.70 \ ATOM 80 CD1 LEU X 11 -46.013 -14.544 38.492 1.00 1.70 \ ATOM 81 CD2 LEU X 11 -47.591 -16.246 37.644 1.00 1.70 \ ATOM 82 N VAL X 12 -44.556 -15.046 33.367 1.00 0.71 \ ATOM 83 CA VAL X 12 -44.499 -14.337 32.079 1.00 0.71 \ ATOM 84 C VAL X 12 -44.761 -15.207 30.861 1.00 0.71 \ ATOM 85 O VAL X 12 -45.305 -14.711 29.885 1.00 0.71 \ ATOM 86 CB VAL X 12 -43.244 -13.452 31.929 1.00 0.71 \ ATOM 87 CG1 VAL X 12 -43.200 -12.359 32.979 1.00 0.71 \ ATOM 88 CG2 VAL X 12 -41.971 -14.261 31.938 1.00 0.71 \ ATOM 89 N GLU X 13 -44.435 -16.508 30.927 1.00 0.66 \ ATOM 90 CA GLU X 13 -44.776 -17.441 29.877 1.00 0.66 \ ATOM 91 C GLU X 13 -46.270 -17.592 29.890 1.00 0.66 \ ATOM 92 O GLU X 13 -46.908 -17.784 28.893 1.00 0.66 \ ATOM 93 CB GLU X 13 -44.102 -18.821 30.090 1.00 0.66 \ ATOM 94 CG GLU X 13 -43.304 -19.358 28.917 1.00 0.66 \ ATOM 95 CD GLU X 13 -41.806 -19.007 28.956 1.00 0.66 \ ATOM 96 OE1 GLU X 13 -40.979 -19.916 29.227 1.00 0.66 \ ATOM 97 OE2 GLU X 13 -41.441 -17.829 28.700 1.00 0.66 \ ATOM 98 N ALA X 14 -46.875 -17.637 31.058 1.00 -0.02 \ ATOM 99 CA ALA X 14 -48.346 -17.769 31.038 1.00 -0.02 \ ATOM 100 C ALA X 14 -49.074 -16.503 30.429 1.00 -0.02 \ ATOM 101 O ALA X 14 -50.027 -16.636 29.673 1.00 -0.02 \ ATOM 102 CB ALA X 14 -48.851 -18.080 32.431 1.00 -0.02 \ ATOM 103 N LEU X 15 -48.590 -15.337 30.765 1.00 1.70 \ ATOM 104 CA LEU X 15 -49.136 -14.091 30.230 1.00 1.70 \ ATOM 105 C LEU X 15 -48.950 -14.019 28.710 1.00 1.70 \ ATOM 106 O LEU X 15 -49.814 -13.431 28.035 1.00 1.70 \ ATOM 107 CB LEU X 15 -48.550 -12.850 30.867 1.00 1.70 \ ATOM 108 CG LEU X 15 -48.828 -12.705 32.369 1.00 1.70 \ ATOM 109 CD1 LEU X 15 -48.040 -11.541 32.879 1.00 1.70 \ ATOM 110 CD2 LEU X 15 -50.320 -12.549 32.634 1.00 1.70 \ ATOM 111 N TYR X 16 -47.843 -14.556 28.198 1.00 -0.22 \ ATOM 112 CA TYR X 16 -47.569 -14.550 26.754 1.00 -0.22 \ ATOM 113 C TYR X 16 -48.731 -15.227 26.048 1.00 -0.22 \ ATOM 114 O TYR X 16 -49.233 -14.701 25.062 1.00 -0.22 \ ATOM 115 CB TYR X 16 -46.244 -15.287 26.449 1.00 -0.22 \ ATOM 116 CG TYR X 16 -46.133 -15.646 25.008 1.00 -0.22 \ ATOM 117 CD1 TYR X 16 -45.967 -14.631 24.063 1.00 -0.22 \ ATOM 118 CD2 TYR X 16 -46.255 -16.982 24.559 1.00 -0.22 \ ATOM 119 CE1 TYR X 16 -45.900 -14.929 22.739 1.00 -0.22 \ ATOM 120 CE2 TYR X 16 -46.189 -17.272 23.219 1.00 -0.22 \ ATOM 121 CZ TYR X 16 -46.019 -16.223 22.338 1.00 -0.22 \ ATOM 122 OH TYR X 16 -45.950 -16.370 21.023 1.00 -0.22 \ ATOM 123 N LEU X 17 -49.156 -16.408 26.545 1.00 -0.23 \ ATOM 124 CA LEU X 17 -50.297 -17.147 25.975 1.00 -0.23 \ ATOM 125 C LEU X 17 -51.669 -16.507 26.311 1.00 -0.23 \ ATOM 126 O LEU X 17 -52.532 -16.403 25.451 1.00 -0.23 \ ATOM 127 CB LEU X 17 -50.300 -18.588 26.468 1.00 -0.23 \ ATOM 128 CG LEU X 17 -49.219 -19.475 25.837 1.00 -0.23 \ ATOM 129 CD1 LEU X 17 -49.147 -20.834 26.488 1.00 -0.23 \ ATOM 130 CD2 LEU X 17 -49.517 -19.648 24.378 1.00 -0.23 \ ATOM 131 N VAL X 18 -51.882 -16.163 27.574 1.00 0.26 \ ATOM 132 CA VAL X 18 -53.210 -15.678 28.046 1.00 0.26 \ ATOM 133 C VAL X 18 -53.604 -14.359 27.353 1.00 0.26 \ ATOM 134 O VAL X 18 -54.694 -14.222 26.832 1.00 0.26 \ ATOM 135 CB VAL X 18 -53.211 -15.544 29.590 1.00 0.26 \ ATOM 136 CG1 VAL X 18 -54.442 -14.758 30.140 1.00 0.26 \ ATOM 137 CG2 VAL X 18 -53.203 -16.957 30.171 1.00 0.26 \ ATOM 138 N CYS X 19 -52.656 -13.445 27.290 1.00 1.70 \ ATOM 139 CA CYS X 19 -52.886 -12.097 26.828 1.00 1.70 \ ATOM 140 C CYS X 19 -52.835 -11.977 25.299 1.00 1.70 \ ATOM 141 O CYS X 19 -53.314 -11.000 24.759 1.00 1.70 \ ATOM 142 CB CYS X 19 -51.832 -11.152 27.384 1.00 1.70 \ ATOM 143 SG CYS X 19 -51.717 -11.021 29.173 1.00 1.70 \ ATOM 144 N GLY X 20 -52.187 -12.915 24.614 1.00 -0.16 \ ATOM 145 CA GLY X 20 -52.287 -13.015 23.165 1.00 -0.16 \ ATOM 146 C GLY X 20 -51.737 -11.780 22.477 1.00 -0.16 \ ATOM 147 O GLY X 20 -50.703 -11.264 22.880 1.00 -0.16 \ ATOM 148 N GLU X 21 -52.473 -11.301 21.474 1.00 0.19 \ ATOM 149 CA GLU X 21 -52.119 -10.138 20.685 1.00 0.19 \ ATOM 150 C GLU X 21 -51.989 -8.852 21.530 1.00 0.19 \ ATOM 151 O GLU X 21 -51.157 -7.988 21.233 1.00 0.19 \ ATOM 152 CB GLU X 21 -53.139 -9.965 19.528 1.00 0.19 \ ATOM 153 N ARG X 22 -52.732 -8.782 22.625 1.00 -0.61 \ ATOM 154 CA ARG X 22 -52.741 -7.636 23.519 1.00 -0.61 \ ATOM 155 C ARG X 22 -51.406 -7.378 24.230 1.00 -0.61 \ ATOM 156 O ARG X 22 -51.091 -6.244 24.620 1.00 -0.61 \ ATOM 157 CB ARG X 22 -53.821 -7.829 24.608 1.00 -0.61 \ ATOM 158 CG ARG X 22 -55.233 -8.151 24.119 1.00 -0.61 \ ATOM 159 CD ARG X 22 -56.181 -8.510 25.257 1.00 -0.61 \ ATOM 160 NE ARG X 22 -56.210 -9.951 25.592 1.00 -0.61 \ ATOM 161 CZ ARG X 22 -56.764 -10.481 26.692 1.00 -0.61 \ ATOM 162 NH1 ARG X 22 -57.356 -9.696 27.597 1.00 -0.61 \ ATOM 163 NH2 ARG X 22 -56.730 -11.815 26.888 1.00 -0.61 \ ATOM 164 N GLY X 23 -50.614 -8.422 24.466 1.00 1.70 \ ATOM 165 CA GLY X 23 -49.447 -8.242 25.299 1.00 1.70 \ ATOM 166 C GLY X 23 -49.687 -7.782 26.738 1.00 1.70 \ ATOM 167 O GLY X 23 -50.810 -7.818 27.243 1.00 1.70 \ ATOM 168 N PHE X 24 -48.632 -7.342 27.390 1.00 1.13 \ ATOM 169 CA PHE X 24 -48.680 -7.074 28.837 1.00 1.13 \ ATOM 170 C PHE X 24 -47.451 -6.338 29.299 1.00 1.13 \ ATOM 171 O PHE X 24 -46.406 -6.381 28.652 1.00 1.13 \ ATOM 172 CB PHE X 24 -48.752 -8.418 29.647 1.00 1.13 \ ATOM 173 CG PHE X 24 -47.546 -9.340 29.439 1.00 1.13 \ ATOM 174 CD1 PHE X 24 -47.561 -10.248 28.440 1.00 1.13 \ ATOM 175 CD2 PHE X 24 -46.431 -9.294 30.305 1.00 1.13 \ ATOM 176 CE1 PHE X 24 -46.490 -11.097 28.225 1.00 1.13 \ ATOM 177 CE2 PHE X 24 -45.361 -10.157 30.120 1.00 1.13 \ ATOM 178 CZ PHE X 24 -45.376 -11.017 29.071 1.00 1.13 \ ATOM 179 N PHE X 25 -47.573 -5.696 30.450 1.00 0.51 \ ATOM 180 CA PHE X 25 -46.447 -5.130 31.195 1.00 0.51 \ ATOM 181 C PHE X 25 -46.182 -6.088 32.339 1.00 0.51 \ ATOM 182 O PHE X 25 -47.092 -6.470 33.036 1.00 0.51 \ ATOM 183 CB PHE X 25 -46.800 -3.760 31.826 1.00 0.51 \ ATOM 184 CG PHE X 25 -46.049 -2.572 31.229 1.00 0.51 \ ATOM 185 CD1 PHE X 25 -46.487 -1.961 30.024 1.00 0.51 \ ATOM 186 CD2 PHE X 25 -44.917 -2.028 31.889 1.00 0.51 \ ATOM 187 CE1 PHE X 25 -45.799 -0.856 29.484 1.00 0.51 \ ATOM 188 CE2 PHE X 25 -44.233 -0.924 31.350 1.00 0.51 \ ATOM 189 CZ PHE X 25 -44.673 -0.339 30.150 1.00 0.51 \ ATOM 190 N TYR X 26 -44.937 -6.440 32.544 1.00 -0.25 \ ATOM 191 CA TYR X 26 -44.575 -7.198 33.701 1.00 -0.25 \ ATOM 192 C TYR X 26 -43.979 -6.218 34.671 1.00 -0.25 \ ATOM 193 O TYR X 26 -42.863 -5.758 34.443 1.00 -0.25 \ ATOM 194 CB TYR X 26 -43.557 -8.291 33.334 1.00 -0.25 \ ATOM 195 CG TYR X 26 -43.142 -9.089 34.525 1.00 -0.25 \ ATOM 196 CD1 TYR X 26 -44.078 -9.756 35.288 1.00 -0.25 \ ATOM 197 CD2 TYR X 26 -41.817 -9.189 34.878 1.00 -0.25 \ ATOM 198 CE1 TYR X 26 -43.688 -10.517 36.366 1.00 -0.25 \ ATOM 199 CE2 TYR X 26 -41.437 -9.930 35.938 1.00 -0.25 \ ATOM 200 CZ TYR X 26 -42.394 -10.575 36.692 1.00 -0.25 \ ATOM 201 OH TYR X 26 -42.003 -11.325 37.775 1.00 -0.25 \ ATOM 202 N THR X 27 -44.704 -5.895 35.749 1.00 -0.98 \ ATOM 203 CA THR X 27 -44.165 -5.019 36.817 1.00 -0.98 \ ATOM 204 C THR X 27 -44.141 -5.813 38.124 1.00 -0.98 \ ATOM 205 O THR X 27 -45.198 -6.024 38.707 1.00 -0.98 \ ATOM 206 CB THR X 27 -44.974 -3.698 36.985 1.00 -0.98 \ ATOM 207 OG1 THR X 27 -46.368 -3.974 37.151 1.00 -0.98 \ ATOM 208 CG2 THR X 27 -44.812 -2.780 35.765 1.00 -0.98 \ ATOM 209 N PRO X 28 -42.953 -6.301 38.556 1.00 -0.79 \ ATOM 210 CA PRO X 28 -42.864 -7.102 39.797 1.00 -0.79 \ ATOM 211 C PRO X 28 -42.800 -6.292 41.112 1.00 -0.79 \ ATOM 212 O PRO X 28 -42.633 -5.062 41.095 1.00 -0.79 \ ATOM 213 CB PRO X 28 -41.584 -7.928 39.589 1.00 -0.79 \ ATOM 214 CG PRO X 28 -40.744 -7.111 38.665 1.00 -0.79 \ ATOM 215 CD PRO X 28 -41.665 -6.265 37.835 1.00 -0.79 \ """, "e5mt9e1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mt9e1_csv", state=0, origin=1) cmd.zoom("e5mt9e1_csv", animate=-1)