cmd.read_pdbstr("""\ ATOM 1 N ILE j 8 21.364 -25.870 38.462 1.00 0.67 \ ATOM 2 CA ILE j 8 22.078 -26.100 37.213 1.00 0.67 \ ATOM 3 C ILE j 8 22.502 -24.779 36.587 1.00 0.67 \ ATOM 4 O ILE j 8 21.690 -23.877 36.430 1.00 0.67 \ ATOM 5 CB ILE j 8 21.233 -26.904 36.227 1.00 0.67 \ ATOM 6 CG1 ILE j 8 20.880 -28.268 36.813 1.00 0.67 \ ATOM 7 CG2 ILE j 8 21.970 -27.068 34.915 1.00 0.67 \ ATOM 8 CD1 ILE j 8 20.170 -29.179 35.840 1.00 0.67 \ ATOM 9 N PRO j 9 23.780 -24.665 36.241 1.00 0.67 \ ATOM 10 CA PRO j 9 24.268 -23.434 35.616 1.00 0.67 \ ATOM 11 C PRO j 9 23.698 -23.232 34.224 1.00 0.67 \ ATOM 12 O PRO j 9 23.473 -24.180 33.470 1.00 0.67 \ ATOM 13 CB PRO j 9 25.784 -23.645 35.564 1.00 0.67 \ ATOM 14 CG PRO j 9 26.059 -24.622 36.641 1.00 0.67 \ ATOM 15 CD PRO j 9 24.887 -25.549 36.631 1.00 0.67 \ ATOM 16 N LEU j 10 23.480 -21.963 33.887 1.00 0.67 \ ATOM 17 CA LEU j 10 22.952 -21.625 32.574 1.00 0.67 \ ATOM 18 C LEU j 10 23.954 -21.947 31.474 1.00 0.67 \ ATOM 19 O LEU j 10 23.570 -22.423 30.401 1.00 0.67 \ ATOM 20 CB LEU j 10 22.563 -20.152 32.550 1.00 0.67 \ ATOM 21 CG LEU j 10 21.967 -19.555 31.279 1.00 0.67 \ ATOM 22 CD1 LEU j 10 20.837 -20.404 30.768 1.00 0.67 \ ATOM 23 CD2 LEU j 10 21.479 -18.148 31.562 1.00 0.67 \ ATOM 24 N TRP j 11 25.247 -21.719 31.732 1.00 0.67 \ ATOM 25 CA TRP j 11 26.262 -21.924 30.701 1.00 0.67 \ ATOM 26 C TRP j 11 26.393 -23.390 30.317 1.00 0.67 \ ATOM 27 O TRP j 11 26.682 -23.702 29.157 1.00 0.67 \ ATOM 28 CB TRP j 11 27.612 -21.362 31.158 1.00 0.67 \ ATOM 29 CG TRP j 11 28.362 -22.179 32.181 1.00 0.67 \ ATOM 30 CD1 TRP j 11 28.331 -22.023 33.531 1.00 0.67 \ ATOM 31 CD2 TRP j 11 29.277 -23.252 31.925 1.00 0.67 \ ATOM 32 NE1 TRP j 11 29.154 -22.939 34.134 1.00 0.67 \ ATOM 33 CE2 TRP j 11 29.746 -23.706 33.168 1.00 0.67 \ ATOM 34 CE3 TRP j 11 29.735 -23.878 30.765 1.00 0.67 \ ATOM 35 CZ2 TRP j 11 30.648 -24.758 33.287 1.00 0.67 \ ATOM 36 CZ3 TRP j 11 30.627 -24.920 30.885 1.00 0.67 \ ATOM 37 CH2 TRP j 11 31.074 -25.352 32.137 1.00 0.67 \ ATOM 38 N ILE j 12 26.186 -24.303 31.260 1.00 -1.07 \ ATOM 39 CA ILE j 12 26.164 -25.713 30.894 1.00 -1.07 \ ATOM 40 C ILE j 12 24.982 -25.999 29.985 1.00 -1.07 \ ATOM 41 O ILE j 12 25.123 -26.677 28.961 1.00 -1.07 \ ATOM 42 CB ILE j 12 26.142 -26.598 32.150 1.00 -1.07 \ ATOM 43 CG1 ILE j 12 27.366 -26.310 33.016 1.00 -1.07 \ ATOM 44 CG2 ILE j 12 26.107 -28.059 31.759 1.00 -1.07 \ ATOM 45 CD1 ILE j 12 27.506 -27.220 34.201 1.00 -1.07 \ ATOM 46 N VAL j 13 23.806 -25.462 30.328 1.00 0.67 \ ATOM 47 CA VAL j 13 22.590 -25.765 29.579 1.00 0.67 \ ATOM 48 C VAL j 13 22.719 -25.286 28.142 1.00 0.67 \ ATOM 49 O VAL j 13 22.448 -26.031 27.193 1.00 0.67 \ ATOM 50 CB VAL j 13 21.364 -25.139 30.270 1.00 0.67 \ ATOM 51 CG1 VAL j 13 20.113 -25.390 29.459 1.00 0.67 \ ATOM 52 CG2 VAL j 13 21.194 -25.695 31.667 1.00 0.67 \ ATOM 53 N ALA j 14 23.138 -24.034 27.962 1.00 0.67 \ ATOM 54 CA ALA j 14 23.259 -23.486 26.618 1.00 0.67 \ ATOM 55 C ALA j 14 24.281 -24.248 25.789 1.00 0.67 \ ATOM 56 O ALA j 14 24.113 -24.388 24.573 1.00 0.67 \ ATOM 57 CB ALA j 14 23.626 -22.006 26.688 1.00 0.67 \ ATOM 58 N THR j 15 25.332 -24.761 26.428 1.00 0.67 \ ATOM 59 CA THR j 15 26.363 -25.500 25.710 1.00 0.67 \ ATOM 60 C THR j 15 25.829 -26.831 25.200 1.00 0.67 \ ATOM 61 O THR j 15 25.974 -27.163 24.019 1.00 0.67 \ ATOM 62 CB THR j 15 27.557 -25.721 26.631 1.00 0.67 \ ATOM 63 OG1 THR j 15 27.847 -24.504 27.328 1.00 0.67 \ ATOM 64 CG2 THR j 15 28.769 -26.153 25.836 1.00 0.67 \ ATOM 65 N VAL j 16 25.223 -27.617 26.086 1.00 0.67 \ ATOM 66 CA VAL j 16 24.605 -28.869 25.667 1.00 0.67 \ ATOM 67 C VAL j 16 23.501 -28.605 24.651 1.00 0.67 \ ATOM 68 O VAL j 16 23.356 -29.338 23.666 1.00 0.67 \ ATOM 69 CB VAL j 16 24.077 -29.637 26.890 1.00 0.67 \ ATOM 70 CG1 VAL j 16 23.309 -30.856 26.447 1.00 0.67 \ ATOM 71 CG2 VAL j 16 25.231 -30.028 27.795 1.00 0.67 \ ATOM 72 N ALA j 17 22.719 -27.544 24.863 1.00 0.67 \ ATOM 73 CA ALA j 17 21.713 -27.179 23.880 1.00 0.67 \ ATOM 74 C ALA j 17 22.348 -26.924 22.522 1.00 0.67 \ ATOM 75 O ALA j 17 21.816 -27.342 21.492 1.00 0.67 \ ATOM 76 CB ALA j 17 20.937 -25.951 24.348 1.00 0.67 \ ATOM 77 N GLY j 18 23.495 -26.248 22.506 1.00 0.67 \ ATOM 78 CA GLY j 18 24.170 -25.981 21.248 1.00 0.67 \ ATOM 79 C GLY j 18 24.800 -27.214 20.640 1.00 0.67 \ ATOM 80 O GLY j 18 24.696 -27.442 19.433 1.00 0.67 \ ATOM 81 N MET j 19 25.457 -28.028 21.463 1.00 -1.07 \ ATOM 82 CA MET j 19 26.000 -29.273 20.941 1.00 -1.07 \ ATOM 83 C MET j 19 24.896 -30.113 20.320 1.00 -1.07 \ ATOM 84 O MET j 19 25.076 -30.690 19.243 1.00 -1.07 \ ATOM 85 CB MET j 19 26.730 -30.043 22.038 1.00 -1.07 \ ATOM 86 CG MET j 19 28.041 -29.390 22.477 1.00 -1.07 \ ATOM 87 SD MET j 19 28.997 -30.335 23.680 1.00 -1.07 \ ATOM 88 CE MET j 19 29.794 -31.530 22.614 1.00 -1.07 \ ATOM 89 N GLY j 20 23.727 -30.145 20.960 1.00 0.67 \ ATOM 90 CA GLY j 20 22.595 -30.836 20.372 1.00 0.67 \ ATOM 91 C GLY j 20 22.177 -30.237 19.045 1.00 0.67 \ ATOM 92 O GLY j 20 21.953 -30.954 18.072 1.00 0.67 \ ATOM 93 N VAL j 21 22.074 -28.911 18.989 1.00 -1.06 \ ATOM 94 CA VAL j 21 21.752 -28.232 17.739 1.00 -1.06 \ ATOM 95 C VAL j 21 22.708 -28.638 16.630 1.00 -1.06 \ ATOM 96 O VAL j 21 22.299 -28.860 15.486 1.00 -1.06 \ ATOM 97 CB VAL j 21 21.769 -26.710 17.946 1.00 -1.06 \ ATOM 98 CG1 VAL j 21 21.617 -26.006 16.618 1.00 -1.06 \ ATOM 99 CG2 VAL j 21 20.682 -26.296 18.890 1.00 -1.06 \ ATOM 100 N ILE j 22 24.002 -28.723 16.943 1.00 -1.07 \ ATOM 101 CA ILE j 22 24.988 -28.983 15.901 1.00 -1.07 \ ATOM 102 C ILE j 22 24.885 -30.415 15.406 1.00 -1.07 \ ATOM 103 O ILE j 22 25.092 -30.684 14.218 1.00 -1.07 \ ATOM 104 CB ILE j 22 26.402 -28.655 16.413 1.00 -1.07 \ ATOM 105 CG1 ILE j 22 26.471 -27.205 16.873 1.00 -1.07 \ ATOM 106 CG2 ILE j 22 27.436 -28.883 15.327 1.00 -1.07 \ ATOM 107 CD1 ILE j 22 27.852 -26.749 17.245 1.00 -1.07 \ ATOM 108 N VAL j 23 24.532 -31.351 16.286 1.00 -2.12 \ ATOM 109 CA VAL j 23 24.459 -32.750 15.883 1.00 -2.12 \ ATOM 110 C VAL j 23 23.281 -32.985 14.947 1.00 -2.12 \ ATOM 111 O VAL j 23 23.411 -33.684 13.935 1.00 -2.12 \ ATOM 112 CB VAL j 23 24.394 -33.658 17.121 1.00 -2.12 \ ATOM 113 CG1 VAL j 23 24.071 -35.067 16.717 1.00 -2.12 \ ATOM 114 CG2 VAL j 23 25.714 -33.629 17.861 1.00 -2.12 \ ATOM 115 N ILE j 24 22.122 -32.394 15.249 1.00 -2.11 \ ATOM 116 CA ILE j 24 20.949 -32.626 14.408 1.00 -2.11 \ ATOM 117 C ILE j 24 21.148 -32.018 13.023 1.00 -2.11 \ ATOM 118 O ILE j 24 20.739 -32.600 12.014 1.00 -2.11 \ ATOM 119 CB ILE j 24 19.662 -32.111 15.091 1.00 -2.11 \ ATOM 120 CG1 ILE j 24 18.435 -32.492 14.271 1.00 -2.11 \ ATOM 121 CG2 ILE j 24 19.680 -30.615 15.284 1.00 -2.11 \ ATOM 122 CD1 ILE j 24 18.280 -33.975 14.065 1.00 -2.11 \ ATOM 123 N VAL j 25 21.801 -30.859 12.944 1.00 -1.09 \ ATOM 124 CA VAL j 25 22.058 -30.246 11.647 1.00 -1.09 \ ATOM 125 C VAL j 25 23.088 -31.046 10.874 1.00 -1.09 \ ATOM 126 O VAL j 25 22.949 -31.260 9.666 1.00 -1.09 \ ATOM 127 CB VAL j 25 22.508 -28.789 11.821 1.00 -1.09 \ ATOM 128 CG1 VAL j 25 22.823 -28.174 10.470 1.00 -1.09 \ ATOM 129 CG2 VAL j 25 21.453 -28.012 12.526 1.00 -1.09 \ ATOM 130 N GLY j 26 24.143 -31.490 11.552 1.00 0.67 \ ATOM 131 CA GLY j 26 25.134 -32.312 10.886 1.00 0.67 \ ATOM 132 C GLY j 26 24.546 -33.606 10.376 1.00 0.67 \ ATOM 133 O GLY j 26 24.923 -34.096 9.311 1.00 0.67 \ ATOM 134 N LEU j 27 23.603 -34.168 11.127 1.00 -1.07 \ ATOM 135 CA LEU j 27 22.846 -35.315 10.644 1.00 -1.07 \ ATOM 136 C LEU j 27 22.188 -35.016 9.304 1.00 -1.07 \ ATOM 137 O LEU j 27 22.239 -35.834 8.380 1.00 -1.07 \ ATOM 138 CB LEU j 27 21.807 -35.702 11.691 1.00 -1.07 \ ATOM 139 CG LEU j 27 21.084 -37.031 11.532 1.00 -1.07 \ ATOM 140 CD1 LEU j 27 22.102 -38.163 11.482 1.00 -1.07 \ ATOM 141 CD2 LEU j 27 20.102 -37.229 12.668 1.00 -1.07 \ ATOM 142 N PHE j 28 21.585 -33.837 9.167 1.00 0.67 \ ATOM 143 CA PHE j 28 20.912 -33.512 7.915 1.00 0.67 \ ATOM 144 C PHE j 28 21.913 -33.369 6.778 1.00 0.67 \ ATOM 145 O PHE j 28 21.683 -33.875 5.675 1.00 0.67 \ ATOM 146 CB PHE j 28 20.078 -32.236 8.070 1.00 0.67 \ ATOM 147 CG PHE j 28 19.013 -32.321 9.128 1.00 0.67 \ ATOM 148 CD1 PHE j 28 18.478 -33.536 9.497 1.00 0.67 \ ATOM 149 CD2 PHE j 28 18.546 -31.182 9.750 1.00 0.67 \ ATOM 150 CE1 PHE j 28 17.516 -33.607 10.463 1.00 0.67 \ ATOM 151 CE2 PHE j 28 17.582 -31.259 10.719 1.00 0.67 \ ATOM 152 CZ PHE j 28 17.071 -32.466 11.074 1.00 0.67 \ ATOM 153 N PHE j 29 23.034 -32.691 7.029 1.00 0.67 \ ATOM 154 CA PHE j 29 24.036 -32.522 5.983 1.00 0.67 \ ATOM 155 C PHE j 29 24.649 -33.859 5.587 1.00 0.67 \ ATOM 156 O PHE j 29 24.867 -34.118 4.400 1.00 0.67 \ ATOM 157 CB PHE j 29 25.113 -31.543 6.438 1.00 0.67 \ ATOM 158 CG PHE j 29 24.743 -30.098 6.259 1.00 0.67 \ ATOM 159 CD1 PHE j 29 24.665 -29.547 4.998 1.00 0.67 \ ATOM 160 CD2 PHE j 29 24.512 -29.288 7.350 1.00 0.67 \ ATOM 161 CE1 PHE j 29 24.349 -28.236 4.832 1.00 0.67 \ ATOM 162 CE2 PHE j 29 24.194 -27.976 7.180 1.00 0.67 \ ATOM 163 CZ PHE j 29 24.111 -27.451 5.921 1.00 0.67 \ ATOM 164 N TYR j 30 24.938 -34.721 6.562 1.00 0.67 \ ATOM 165 CA TYR j 30 25.304 -36.089 6.218 1.00 0.67 \ ATOM 166 C TYR j 30 24.194 -36.750 5.419 1.00 0.67 \ ATOM 167 O TYR j 30 24.458 -37.414 4.412 1.00 0.67 \ ATOM 168 CB TYR j 30 25.630 -36.899 7.476 1.00 0.67 \ ATOM 169 CG TYR j 30 25.334 -38.381 7.339 1.00 0.67 \ ATOM 170 CD1 TYR j 30 26.121 -39.204 6.547 1.00 0.67 \ ATOM 171 CD2 TYR j 30 24.260 -38.953 8.002 1.00 0.67 \ ATOM 172 CE1 TYR j 30 25.837 -40.555 6.416 1.00 0.67 \ ATOM 173 CE2 TYR j 30 23.970 -40.298 7.878 1.00 0.67 \ ATOM 174 CZ TYR j 30 24.761 -41.094 7.088 1.00 0.67 \ ATOM 175 OH TYR j 30 24.463 -42.432 6.974 1.00 0.67 \ ATOM 176 N GLY j 31 22.941 -36.543 5.830 1.00 0.67 \ ATOM 177 CA GLY j 31 21.826 -37.115 5.104 1.00 0.67 \ ATOM 178 C GLY j 31 21.799 -36.732 3.641 1.00 0.67 \ ATOM 179 O GLY j 31 21.384 -37.524 2.799 1.00 0.67 \ ATOM 180 N ALA j 32 22.254 -35.528 3.313 1.00 -1.00 \ ATOM 181 CA ALA j 32 22.234 -35.105 1.921 1.00 -1.00 \ ATOM 182 C ALA j 32 23.167 -35.909 1.027 1.00 -1.00 \ ATOM 183 O ALA j 32 23.109 -35.745 -0.193 1.00 -1.00 \ ATOM 184 CB ALA j 32 22.589 -33.631 1.822 1.00 -1.00 \ ATOM 185 N TYR j 33 24.020 -36.763 1.587 1.00 -1.00 \ ATOM 186 CA TYR j 33 24.943 -37.555 0.789 1.00 -1.00 \ ATOM 187 C TYR j 33 24.613 -39.041 0.787 1.00 -1.00 \ ATOM 188 O TYR j 33 25.296 -39.806 0.107 1.00 -1.00 \ ATOM 189 CB TYR j 33 26.382 -37.339 1.273 1.00 -1.00 \ ATOM 190 CG TYR j 33 26.904 -35.930 1.094 1.00 -1.00 \ ATOM 191 CD1 TYR j 33 27.295 -35.473 -0.149 1.00 -1.00 \ ATOM 192 CD2 TYR j 33 27.022 -35.065 2.171 1.00 -1.00 \ ATOM 193 CE1 TYR j 33 27.773 -34.205 -0.319 1.00 -1.00 \ ATOM 194 CE2 TYR j 33 27.500 -33.785 2.004 1.00 -1.00 \ ATOM 195 CZ TYR j 33 27.868 -33.364 0.755 1.00 -1.00 \ ATOM 196 OH TYR j 33 28.340 -32.097 0.567 1.00 -1.00 \ ATOM 197 N ALA j 34 23.578 -39.466 1.509 1.00 -1.00 \ ATOM 198 CA ALA j 34 23.175 -40.864 1.562 1.00 -1.00 \ ATOM 199 C ALA j 34 21.657 -40.971 1.549 1.00 -1.00 \ ATOM 200 O ALA j 34 20.954 -40.088 2.038 1.00 -1.00 \ ATOM 201 CB ALA j 34 23.718 -41.559 2.810 1.00 -1.00 \ ATOM 202 N GLY j 35 21.157 -42.061 0.989 1.00 -1.00 \ ATOM 203 CA GLY j 35 19.724 -42.305 1.018 1.00 -1.00 \ ATOM 204 C GLY j 35 19.007 -41.528 -0.058 1.00 -1.00 \ ATOM 205 O GLY j 35 19.404 -41.539 -1.219 1.00 -1.00 \ ATOM 206 N LEU j 36 17.936 -40.849 0.324 1.00 -1.00 \ ATOM 207 CA LEU j 36 17.134 -40.104 -0.630 1.00 -1.00 \ ATOM 208 C LEU j 36 17.682 -38.701 -0.807 1.00 -1.00 \ ATOM 209 O LEU j 36 18.049 -38.040 0.162 1.00 -1.00 \ ATOM 210 CB LEU j 36 15.677 -40.032 -0.179 1.00 -1.00 \ ATOM 211 CG LEU j 36 14.888 -41.334 -0.175 1.00 -1.00 \ ATOM 212 CD1 LEU j 36 13.451 -41.035 0.167 1.00 -1.00 \ ATOM 213 CD2 LEU j 36 14.992 -42.020 -1.521 1.00 -1.00 \ ATOM 214 N GLY j 37 17.729 -38.253 -2.052 1.00 -1.00 \ ATOM 215 CA GLY j 37 18.184 -36.917 -2.353 1.00 -1.00 \ ATOM 216 C GLY j 37 19.664 -36.779 -2.622 1.00 -1.00 \ ATOM 217 O GLY j 37 20.172 -35.656 -2.611 1.00 -1.00 \ ATOM 218 N SER j 38 20.368 -37.882 -2.875 1.00 -1.00 \ ATOM 219 CA SER j 38 21.810 -37.881 -3.054 1.00 -1.00 \ ATOM 220 C SER j 38 22.229 -38.075 -4.498 1.00 -1.00 \ ATOM 221 O SER j 38 23.426 -38.089 -4.780 1.00 -1.00 \ ATOM 222 CB SER j 38 22.442 -38.981 -2.201 1.00 -1.00 \ ATOM 223 OG SER j 38 21.875 -38.998 -0.908 1.00 -1.00 \ ATOM 224 N SER j 39 21.281 -38.252 -5.409 1.00 -1.00 \ ATOM 225 CA SER j 39 21.497 -38.551 -6.818 1.00 -1.00 \ ATOM 226 C SER j 39 22.149 -39.905 -7.048 1.00 -1.00 \ ATOM 227 O SER j 39 22.363 -40.274 -8.197 1.00 -1.00 \ ATOM 228 CB SER j 39 22.339 -37.482 -7.519 1.00 -1.00 \ ATOM 229 OG SER j 39 23.678 -37.539 -7.072 1.00 -1.00 \ ATOM 230 N LEU j 40 22.463 -40.656 -6.003 1.00 -1.00 \ ATOM 231 CA LEU j 40 23.157 -41.925 -6.162 1.00 -1.00 \ ATOM 232 C LEU j 40 22.193 -43.109 -6.114 1.00 -1.00 \ ATOM 233 O LEU j 40 21.310 -43.183 -5.267 1.00 -1.00 \ ATOM 234 CB LEU j 40 24.229 -42.089 -5.084 1.00 -1.00 \ ATOM 235 CG LEU j 40 25.333 -41.033 -5.003 1.00 -1.00 \ ATOM 236 CD1 LEU j 40 26.091 -41.160 -3.702 1.00 -1.00 \ ATOM 237 CD2 LEU j 40 26.268 -41.145 -6.186 1.00 -1.00 \ ATOM 238 OXT LEU j 40 22.287 -44.035 -6.916 1.00 -1.00 \ """, "e5mx2j1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5mx2j1_csv", state=0, origin=1) cmd.zoom("e5mx2j1_csv", animate=-1)