cmd.read_pdbstr("""\ ATOM 1 N PHE D 1 103.310 47.672 11.048 1.00 -1.00 \ ATOM 2 CA PHE D 1 102.102 46.875 10.889 1.00 -1.00 \ ATOM 3 C PHE D 1 102.027 45.815 11.980 1.00 -1.00 \ ATOM 4 O PHE D 1 100.970 45.246 12.238 1.00 -1.00 \ ATOM 5 CB PHE D 1 102.061 46.226 9.505 1.00 -1.00 \ ATOM 6 CG PHE D 1 103.374 45.642 9.076 1.00 -1.00 \ ATOM 7 CD1 PHE D 1 103.701 44.337 9.399 1.00 -1.00 \ ATOM 8 CD2 PHE D 1 104.287 46.403 8.368 1.00 -1.00 \ ATOM 9 CE1 PHE D 1 104.913 43.802 9.006 1.00 -1.00 \ ATOM 10 CE2 PHE D 1 105.500 45.873 7.979 1.00 -1.00 \ ATOM 11 CZ PHE D 1 105.811 44.567 8.294 1.00 -1.00 \ ATOM 12 N VAL D 2 103.155 45.575 12.637 1.00 -1.00 \ ATOM 13 CA VAL D 2 103.222 44.575 13.699 1.00 -1.00 \ ATOM 14 C VAL D 2 102.577 45.128 14.964 1.00 -1.00 \ ATOM 15 O VAL D 2 102.752 46.302 15.311 1.00 -1.00 \ ATOM 16 CB VAL D 2 104.688 44.160 13.929 1.00 -1.00 \ ATOM 17 CG1 VAL D 2 104.873 43.448 15.259 1.00 -1.00 \ ATOM 18 CG2 VAL D 2 105.148 43.280 12.777 1.00 -1.00 \ ATOM 19 N ASN D 3 101.811 44.275 15.656 1.00 -0.47 \ ATOM 20 CA ASN D 3 101.170 44.640 16.921 1.00 -0.47 \ ATOM 21 C ASN D 3 100.204 45.804 16.733 1.00 -0.47 \ ATOM 22 O ASN D 3 100.091 46.692 17.577 1.00 -0.47 \ ATOM 23 CB ASN D 3 102.213 44.943 17.990 1.00 -0.47 \ ATOM 24 CG ASN D 3 102.989 43.722 18.373 1.00 -0.47 \ ATOM 25 OD1 ASN D 3 102.447 42.614 18.381 1.00 -0.47 \ ATOM 26 ND2 ASN D 3 104.270 43.902 18.693 1.00 -0.47 \ ATOM 27 N GLN D 4 99.494 45.790 15.611 1.00 0.22 \ ATOM 28 CA GLN D 4 98.468 46.774 15.323 1.00 0.22 \ ATOM 29 C GLN D 4 97.187 46.051 14.936 1.00 0.22 \ ATOM 30 O GLN D 4 97.204 44.874 14.572 1.00 0.22 \ ATOM 31 CB GLN D 4 98.882 47.707 14.173 1.00 0.22 \ ATOM 32 CG GLN D 4 100.176 48.452 14.399 1.00 0.22 \ ATOM 33 CD GLN D 4 100.615 49.196 13.158 1.00 0.22 \ ATOM 34 OE1 GLN D 4 99.833 49.369 12.220 1.00 0.22 \ ATOM 35 NE2 GLN D 4 101.871 49.631 13.137 1.00 0.22 \ ATOM 36 N HIS D 5 96.071 46.769 15.024 1.00 -0.04 \ ATOM 37 CA HIS D 5 94.851 46.308 14.377 1.00 -0.04 \ ATOM 38 C HIS D 5 95.036 46.365 12.869 1.00 -0.04 \ ATOM 39 O HIS D 5 95.416 47.404 12.319 1.00 -0.04 \ ATOM 40 CB HIS D 5 93.663 47.168 14.802 1.00 -0.04 \ ATOM 41 CG HIS D 5 93.442 47.190 16.284 1.00 -0.04 \ ATOM 42 ND1 HIS D 5 93.730 48.289 17.064 1.00 -0.04 \ ATOM 43 CD2 HIS D 5 92.978 46.240 17.130 1.00 -0.04 \ ATOM 44 CE1 HIS D 5 93.446 48.019 18.326 1.00 -0.04 \ ATOM 45 NE2 HIS D 5 92.988 46.781 18.394 1.00 -0.04 \ ATOM 46 N LEU D 6 94.797 45.243 12.201 1.00 1.15 \ ATOM 47 CA LEU D 6 94.958 45.133 10.755 1.00 1.15 \ ATOM 48 C LEU D 6 93.588 44.808 10.162 1.00 1.15 \ ATOM 49 O LEU D 6 93.157 43.651 10.181 1.00 1.15 \ ATOM 50 CB LEU D 6 95.999 44.066 10.404 1.00 1.15 \ ATOM 51 CG LEU D 6 97.404 44.327 10.952 1.00 1.15 \ ATOM 52 CD1 LEU D 6 98.331 43.117 10.668 1.00 1.15 \ ATOM 53 CD2 LEU D 6 97.985 45.631 10.381 1.00 1.15 \ ATOM 54 N CYS D 7 92.902 45.829 9.647 1.00 1.70 \ ATOM 55 CA CYS D 7 91.555 45.689 9.116 1.00 1.70 \ ATOM 56 C CYS D 7 91.568 45.778 7.599 1.00 1.70 \ ATOM 57 O CYS D 7 92.328 46.565 7.019 1.00 1.70 \ ATOM 58 CB CYS D 7 90.629 46.773 9.665 1.00 1.70 \ ATOM 59 SG CYS D 7 90.555 46.796 11.464 1.00 1.70 \ ATOM 60 N GLY D 8 90.719 44.970 6.969 1.00 0.71 \ ATOM 61 CA GLY D 8 90.552 45.048 5.521 1.00 0.71 \ ATOM 62 C GLY D 8 91.862 44.857 4.780 1.00 0.71 \ ATOM 63 O GLY D 8 92.636 43.933 5.056 1.00 0.71 \ ATOM 64 N SER D 9 92.135 45.744 3.827 0.64 -0.48 \ ATOM 65 CA SER D 9 93.314 45.551 2.993 0.64 -0.48 \ ATOM 66 C SER D 9 94.618 45.706 3.774 0.64 -0.48 \ ATOM 67 O SER D 9 95.662 45.240 3.302 0.64 -0.48 \ ATOM 68 CB SER D 9 93.278 46.526 1.814 0.64 -0.48 \ ATOM 69 OG SER D 9 93.267 47.851 2.297 0.64 -0.48 \ ATOM 70 N HIS D 10 94.589 46.340 4.952 1.00 -0.23 \ ATOM 71 CA HIS D 10 95.813 46.469 5.744 1.00 -0.23 \ ATOM 72 C HIS D 10 96.384 45.100 6.096 1.00 -0.23 \ ATOM 73 O HIS D 10 97.610 44.908 6.107 1.00 -0.23 \ ATOM 74 CB HIS D 10 95.527 47.295 7.006 1.00 -0.23 \ ATOM 75 CG HIS D 10 96.753 47.855 7.669 1.00 -0.23 \ ATOM 76 ND1 HIS D 10 96.685 48.674 8.776 1.00 -0.23 \ ATOM 77 CD2 HIS D 10 98.072 47.709 7.391 1.00 -0.23 \ ATOM 78 CE1 HIS D 10 97.906 49.022 9.142 1.00 -0.23 \ ATOM 79 NE2 HIS D 10 98.767 48.447 8.320 1.00 -0.23 \ ATOM 80 N LEU D 11 95.512 44.121 6.356 1.00 1.70 \ ATOM 81 CA LEU D 11 95.997 42.780 6.664 1.00 1.70 \ ATOM 82 C LEU D 11 96.747 42.165 5.491 1.00 1.70 \ ATOM 83 O LEU D 11 97.782 41.535 5.690 1.00 1.70 \ ATOM 84 CB LEU D 11 94.840 41.879 7.091 1.00 1.70 \ ATOM 85 CG LEU D 11 95.234 40.444 7.472 1.00 1.70 \ ATOM 86 CD1 LEU D 11 96.338 40.435 8.539 1.00 1.70 \ ATOM 87 CD2 LEU D 11 94.017 39.670 7.959 1.00 1.70 \ ATOM 88 N VAL D 12 96.250 42.336 4.256 1.00 0.71 \ ATOM 89 CA VAL D 12 96.962 41.691 3.158 1.00 0.71 \ ATOM 90 C VAL D 12 98.238 42.446 2.813 1.00 0.71 \ ATOM 91 O VAL D 12 99.212 41.829 2.356 1.00 0.71 \ ATOM 92 CB VAL D 12 96.059 41.488 1.920 1.00 0.71 \ ATOM 93 CG1 VAL D 12 94.859 40.595 2.282 1.00 0.71 \ ATOM 94 CG2 VAL D 12 95.602 42.788 1.326 1.00 0.71 \ ATOM 95 N GLU D 13 98.273 43.767 3.033 1.00 0.66 \ ATOM 96 CA GLU D 13 99.527 44.503 2.888 1.00 0.66 \ ATOM 97 C GLU D 13 100.561 44.007 3.889 1.00 0.66 \ ATOM 98 O GLU D 13 101.729 43.794 3.537 1.00 0.66 \ ATOM 99 CB GLU D 13 99.280 46.007 3.049 1.00 0.66 \ ATOM 100 CG GLU D 13 98.402 46.583 1.920 1.00 0.66 \ ATOM 101 CD GLU D 13 98.058 48.059 2.108 1.00 0.66 \ ATOM 102 OE1 GLU D 13 98.983 48.901 2.096 1.00 0.66 \ ATOM 103 OE2 GLU D 13 96.856 48.377 2.263 1.00 0.66 \ ATOM 104 N ALA D 14 100.147 43.796 5.136 1.00 -0.00 \ ATOM 105 CA ALA D 14 101.083 43.288 6.141 1.00 -0.00 \ ATOM 106 C ALA D 14 101.573 41.883 5.784 1.00 -0.00 \ ATOM 107 O ALA D 14 102.772 41.587 5.900 1.00 -0.00 \ ATOM 108 CB ALA D 14 100.419 43.284 7.522 1.00 -0.00 \ ATOM 109 N LEU D 15 100.668 41.002 5.340 1.00 1.70 \ ATOM 110 CA LEU D 15 101.079 39.641 4.997 1.00 1.70 \ ATOM 111 C LEU D 15 102.043 39.645 3.815 1.00 1.70 \ ATOM 112 O LEU D 15 102.998 38.871 3.783 1.00 1.70 \ ATOM 113 CB LEU D 15 99.854 38.770 4.697 1.00 1.70 \ ATOM 114 CG LEU D 15 99.013 38.349 5.914 1.00 1.70 \ ATOM 115 CD1 LEU D 15 97.663 37.793 5.479 1.00 1.70 \ ATOM 116 CD2 LEU D 15 99.774 37.325 6.820 1.00 1.70 \ ATOM 117 N TYR D 16 101.808 40.514 2.834 1.00 -0.22 \ ATOM 118 CA TYR D 16 102.737 40.645 1.712 1.00 -0.22 \ ATOM 119 C TYR D 16 104.149 40.965 2.197 1.00 -0.22 \ ATOM 120 O TYR D 16 105.131 40.336 1.775 1.00 -0.22 \ ATOM 121 CB TYR D 16 102.208 41.739 0.786 1.00 -0.22 \ ATOM 122 CG TYR D 16 103.147 42.183 -0.301 1.00 -0.22 \ ATOM 123 CD1 TYR D 16 103.256 41.463 -1.492 1.00 -0.22 \ ATOM 124 CD2 TYR D 16 103.869 43.357 -0.171 1.00 -0.22 \ ATOM 125 CE1 TYR D 16 104.091 41.898 -2.500 1.00 -0.22 \ ATOM 126 CE2 TYR D 16 104.699 43.808 -1.181 1.00 -0.22 \ ATOM 127 CZ TYR D 16 104.816 43.069 -2.338 1.00 -0.22 \ ATOM 128 OH TYR D 16 105.643 43.516 -3.348 1.00 -0.22 \ ATOM 129 N LEU D 17 104.266 41.938 3.097 1.00 -0.23 \ ATOM 130 CA LEU D 17 105.580 42.357 3.576 1.00 -0.23 \ ATOM 131 C LEU D 17 106.218 41.306 4.473 1.00 -0.23 \ ATOM 132 O LEU D 17 107.433 41.093 4.412 1.00 -0.23 \ ATOM 133 CB LEU D 17 105.456 43.677 4.331 1.00 -0.23 \ ATOM 134 CG LEU D 17 105.050 44.864 3.457 1.00 -0.23 \ ATOM 135 CD1 LEU D 17 104.832 46.070 4.353 1.00 -0.23 \ ATOM 136 CD2 LEU D 17 106.151 45.153 2.446 1.00 -0.23 \ ATOM 137 N VAL D 18 105.414 40.652 5.317 1.00 0.28 \ ATOM 138 CA VAL D 18 105.941 39.674 6.267 1.00 0.28 \ ATOM 139 C VAL D 18 106.405 38.420 5.544 1.00 0.28 \ ATOM 140 O VAL D 18 107.442 37.839 5.884 1.00 0.28 \ ATOM 141 CB VAL D 18 104.875 39.333 7.323 1.00 0.28 \ ATOM 142 CG1 VAL D 18 105.258 38.049 8.088 1.00 0.28 \ ATOM 143 CG2 VAL D 18 104.675 40.499 8.286 1.00 0.28 \ ATOM 144 N CYS D 19 105.645 37.973 4.549 1.00 1.70 \ ATOM 145 CA CYS D 19 105.883 36.650 3.989 1.00 1.70 \ ATOM 146 C CYS D 19 106.856 36.645 2.822 1.00 1.70 \ ATOM 147 O CYS D 19 107.399 35.581 2.500 1.00 1.70 \ ATOM 148 CB CYS D 19 104.556 36.027 3.564 1.00 1.70 \ ATOM 149 SG CYS D 19 103.435 35.748 4.978 1.00 1.70 \ ATOM 150 N GLY D 20 107.085 37.791 2.184 1.00 -0.16 \ ATOM 151 CA GLY D 20 108.079 37.852 1.120 1.00 -0.16 \ ATOM 152 C GLY D 20 107.866 36.821 0.026 1.00 -0.16 \ ATOM 153 O GLY D 20 106.744 36.576 -0.426 1.00 -0.16 \ ATOM 154 N GLU D 21 108.966 36.192 -0.401 1.00 0.19 \ ATOM 155 CA GLU D 21 108.898 35.253 -1.517 1.00 0.19 \ ATOM 156 C GLU D 21 108.090 34.002 -1.192 1.00 0.19 \ ATOM 157 O GLU D 21 107.708 33.273 -2.113 1.00 0.19 \ ATOM 158 CB GLU D 21 110.307 34.860 -1.970 1.00 0.19 \ ATOM 159 CG GLU D 21 110.835 35.740 -3.088 1.00 0.19 \ ATOM 160 CD GLU D 21 112.173 35.273 -3.629 1.00 0.19 \ ATOM 161 OE1 GLU D 21 112.957 34.681 -2.855 1.00 0.19 \ ATOM 162 OE2 GLU D 21 112.437 35.497 -4.831 1.00 0.19 \ ATOM 163 N ARG D 22 107.839 33.727 0.090 1.00 -0.61 \ ATOM 164 CA ARG D 22 106.978 32.606 0.449 1.00 -0.61 \ ATOM 165 C ARG D 22 105.551 32.822 -0.039 1.00 -0.61 \ ATOM 166 O ARG D 22 104.860 31.855 -0.382 1.00 -0.61 \ ATOM 167 CB ARG D 22 106.981 32.403 1.967 1.00 -0.61 \ ATOM 168 CG ARG D 22 108.271 31.831 2.538 1.00 -0.61 \ ATOM 169 CD ARG D 22 108.261 31.877 4.071 1.00 -0.61 \ ATOM 170 NE ARG D 22 108.612 33.201 4.595 1.00 -0.61 \ ATOM 171 CZ ARG D 22 108.581 33.542 5.884 1.00 -0.61 \ ATOM 172 NH1 ARG D 22 108.202 32.664 6.808 1.00 -0.61 \ ATOM 173 NH2 ARG D 22 108.923 34.771 6.250 1.00 -0.61 \ ATOM 174 N GLY D 23 105.097 34.070 -0.086 1.00 1.70 \ ATOM 175 CA GLY D 23 103.682 34.316 -0.301 1.00 1.70 \ ATOM 176 C GLY D 23 102.863 33.900 0.919 1.00 1.70 \ ATOM 177 O GLY D 23 103.394 33.474 1.942 1.00 1.70 \ ATOM 178 N PHE D 24 101.542 33.998 0.780 1.00 1.13 \ ATOM 179 CA PHE D 24 100.657 33.786 1.920 1.00 1.13 \ ATOM 180 C PHE D 24 99.296 33.344 1.411 1.00 1.13 \ ATOM 181 O PHE D 24 99.007 33.408 0.212 1.00 1.13 \ ATOM 182 CB PHE D 24 100.524 35.062 2.762 1.00 1.13 \ ATOM 183 CG PHE D 24 99.945 36.230 1.996 1.00 1.13 \ ATOM 184 CD1 PHE D 24 100.778 37.093 1.293 1.00 1.13 \ ATOM 185 CD2 PHE D 24 98.574 36.472 1.988 1.00 1.13 \ ATOM 186 CE1 PHE D 24 100.252 38.180 0.580 1.00 1.13 \ ATOM 187 CE2 PHE D 24 98.038 37.571 1.285 1.00 1.13 \ ATOM 188 CZ PHE D 24 98.883 38.418 0.575 1.00 1.13 \ ATOM 189 N PHE D 25 98.447 32.919 2.339 1.00 0.52 \ ATOM 190 CA PHE D 25 97.050 32.669 2.021 1.00 0.52 \ ATOM 191 C PHE D 25 96.162 33.563 2.879 1.00 0.52 \ ATOM 192 O PHE D 25 96.453 33.816 4.054 1.00 0.52 \ ATOM 193 CB PHE D 25 96.679 31.178 2.171 1.00 0.52 \ ATOM 194 CG PHE D 25 97.178 30.532 3.431 1.00 0.52 \ ATOM 195 CD1 PHE D 25 98.452 29.972 3.484 1.00 0.52 \ ATOM 196 CD2 PHE D 25 96.365 30.446 4.553 1.00 0.52 \ ATOM 197 CE1 PHE D 25 98.919 29.361 4.647 1.00 0.52 \ ATOM 198 CE2 PHE D 25 96.823 29.832 5.718 1.00 0.52 \ ATOM 199 CZ PHE D 25 98.101 29.290 5.763 1.00 0.52 \ ATOM 200 N TYR D 26 95.111 34.094 2.256 1.00 -0.24 \ ATOM 201 CA TYR D 26 94.163 35.000 2.897 1.00 -0.24 \ ATOM 202 C TYR D 26 92.798 34.330 2.860 1.00 -0.24 \ ATOM 203 O TYR D 26 92.243 34.111 1.780 1.00 -0.24 \ ATOM 204 CB TYR D 26 94.149 36.345 2.180 1.00 -0.24 \ ATOM 205 CG TYR D 26 93.143 37.337 2.698 1.00 -0.24 \ ATOM 206 CD1 TYR D 26 93.328 37.962 3.926 1.00 -0.24 \ ATOM 207 CD2 TYR D 26 92.015 37.672 1.949 1.00 -0.24 \ ATOM 208 CE1 TYR D 26 92.414 38.888 4.394 1.00 -0.24 \ ATOM 209 CE2 TYR D 26 91.105 38.590 2.404 1.00 -0.24 \ ATOM 210 CZ TYR D 26 91.308 39.200 3.628 1.00 -0.24 \ ATOM 211 OH TYR D 26 90.407 40.118 4.099 1.00 -0.24 \ ATOM 212 N THR D 27 92.261 33.982 4.036 1.00 -0.98 \ ATOM 213 CA THR D 27 91.076 33.135 4.135 1.00 -0.98 \ ATOM 214 C THR D 27 90.058 33.732 5.107 1.00 -0.98 \ ATOM 215 O THR D 27 90.055 33.400 6.297 1.00 -0.98 \ ATOM 216 CB THR D 27 91.465 31.720 4.564 1.00 -0.98 \ ATOM 217 OG1 THR D 27 92.344 31.792 5.696 1.00 -0.98 \ ATOM 218 CG2 THR D 27 92.187 31.007 3.434 1.00 -0.98 \ ATOM 219 N PRO D 28 89.192 34.625 4.627 1.00 -0.79 \ ATOM 220 CA PRO D 28 88.087 35.104 5.471 1.00 -0.79 \ ATOM 221 C PRO D 28 87.146 33.967 5.828 1.00 -0.79 \ ATOM 222 O PRO D 28 86.821 33.120 4.995 1.00 -0.79 \ ATOM 223 CB PRO D 28 87.388 36.143 4.583 1.00 -0.79 \ ATOM 224 CG PRO D 28 88.432 36.568 3.586 1.00 -0.79 \ ATOM 225 CD PRO D 28 89.279 35.351 3.348 1.00 -0.79 \ ATOM 226 N LYS D 29 86.687 33.954 7.071 1.00 -0.90 \ ATOM 227 CA LYS D 29 85.733 32.927 7.471 1.00 -0.90 \ ATOM 228 C LYS D 29 84.304 33.447 7.366 1.00 -0.90 \ ATOM 229 O LYS D 29 83.908 34.348 8.103 1.00 -0.90 \ ATOM 230 CB LYS D 29 86.026 32.438 8.888 1.00 -0.90 \ ATOM 231 CG LYS D 29 87.375 31.748 9.026 1.00 -0.90 \ ATOM 232 CD LYS D 29 87.577 30.714 7.926 1.00 -0.90 \ ATOM 233 CE LYS D 29 88.970 30.103 7.975 1.00 -0.90 \ ATOM 234 NZ LYS D 29 89.203 29.176 6.832 1.00 -0.90 \ """, "e5t7rD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5t7rD1_csv", state=0, origin=1) cmd.zoom("e5t7rD1_csv", animate=-1)