cmd.read_pdbstr("""\ ATOM 1 N ALA Y 20 -27.830 84.763 380.403 1.00 0.64 \ ATOM 2 CA ALA Y 20 -27.233 85.257 379.168 1.00 0.64 \ ATOM 3 C ALA Y 20 -27.307 84.204 378.067 1.00 0.64 \ ATOM 4 O ALA Y 20 -26.622 84.308 377.049 1.00 0.64 \ ATOM 5 CB ALA Y 20 -25.790 85.676 379.407 1.00 0.64 \ ATOM 6 N GLN Y 21 -28.145 83.188 378.282 1.00 0.64 \ ATOM 7 CA GLN Y 21 -28.302 82.128 377.291 1.00 0.64 \ ATOM 8 C GLN Y 21 -28.943 82.657 376.014 1.00 0.64 \ ATOM 9 O GLN Y 21 -28.480 82.362 374.905 1.00 0.64 \ ATOM 10 CB GLN Y 21 -29.131 80.983 377.874 1.00 0.64 \ ATOM 11 CG GLN Y 21 -28.327 79.933 378.624 1.00 0.64 \ ATOM 12 CD GLN Y 21 -27.695 78.910 377.698 1.00 0.64 \ ATOM 13 OE1 GLN Y 21 -27.723 79.057 376.476 1.00 0.64 \ ATOM 14 NE2 GLN Y 21 -27.127 77.859 378.279 1.00 0.64 \ ATOM 15 N LEU Y 22 -30.013 83.442 376.149 1.00 0.64 \ ATOM 16 CA LEU Y 22 -30.764 83.957 375.010 1.00 0.64 \ ATOM 17 C LEU Y 22 -30.396 85.400 374.675 1.00 0.64 \ ATOM 18 O LEU Y 22 -31.235 86.154 374.171 1.00 0.64 \ ATOM 19 CB LEU Y 22 -32.267 83.838 375.265 1.00 0.64 \ ATOM 20 CG LEU Y 22 -32.878 82.433 375.338 1.00 0.64 \ ATOM 21 CD1 LEU Y 22 -32.290 81.525 374.263 1.00 0.64 \ ATOM 22 CD2 LEU Y 22 -32.726 81.813 376.724 1.00 0.64 \ ATOM 23 N THR Y 23 -29.154 85.798 374.944 1.00 0.64 \ ATOM 24 CA THR Y 23 -28.682 87.144 374.641 1.00 0.64 \ ATOM 25 C THR Y 23 -27.586 87.150 373.589 1.00 0.64 \ ATOM 26 O THR Y 23 -27.664 87.917 372.621 1.00 0.64 \ ATOM 27 CB THR Y 23 -28.180 87.832 375.922 1.00 0.64 \ ATOM 28 OG1 THR Y 23 -29.257 87.948 376.859 1.00 0.64 \ ATOM 29 CG2 THR Y 23 -27.635 89.218 375.607 1.00 0.64 \ ATOM 30 N MET Y 24 -26.561 86.310 373.748 1.00 0.64 \ ATOM 31 CA MET Y 24 -25.473 86.286 372.777 1.00 0.64 \ ATOM 32 C MET Y 24 -25.890 85.597 371.484 1.00 0.64 \ ATOM 33 O MET Y 24 -25.362 85.922 370.414 1.00 0.64 \ ATOM 34 CB MET Y 24 -24.248 85.601 373.384 1.00 0.64 \ ATOM 35 CG MET Y 24 -23.937 86.053 374.806 1.00 0.64 \ ATOM 36 SD MET Y 24 -23.909 87.849 374.984 1.00 0.64 \ ATOM 37 CE MET Y 24 -23.718 88.017 376.757 1.00 0.64 \ ATOM 38 N ILE Y 25 -26.830 84.651 371.558 1.00 -1.50 \ ATOM 39 CA ILE Y 25 -27.358 84.031 370.346 1.00 -1.50 \ ATOM 40 C ILE Y 25 -28.063 85.071 369.484 1.00 -1.50 \ ATOM 41 O ILE Y 25 -28.006 85.021 368.249 1.00 -1.50 \ ATOM 42 CB ILE Y 25 -28.289 82.857 370.708 1.00 -1.50 \ ATOM 43 CG1 ILE Y 25 -29.044 82.349 369.474 1.00 -1.50 \ ATOM 44 CG2 ILE Y 25 -29.264 83.262 371.799 1.00 -1.50 \ ATOM 45 CD1 ILE Y 25 -28.157 81.748 368.406 1.00 -1.50 \ ATOM 46 N ALA Y 26 -28.728 86.038 370.122 1.00 0.64 \ ATOM 47 CA ALA Y 26 -29.354 87.120 369.370 1.00 0.64 \ ATOM 48 C ALA Y 26 -28.308 87.995 368.690 1.00 0.64 \ ATOM 49 O ALA Y 26 -28.504 88.430 367.550 1.00 0.64 \ ATOM 50 CB ALA Y 26 -30.242 87.955 370.291 1.00 0.64 \ ATOM 51 N MET Y 27 -27.189 88.259 369.368 1.00 -1.50 \ ATOM 52 CA MET Y 27 -26.133 89.062 368.758 1.00 -1.50 \ ATOM 53 C MET Y 27 -25.463 88.312 367.614 1.00 -1.50 \ ATOM 54 O MET Y 27 -25.189 88.894 366.559 1.00 -1.50 \ ATOM 55 CB MET Y 27 -25.099 89.463 369.809 1.00 -1.50 \ ATOM 56 CG MET Y 27 -25.685 90.070 371.072 1.00 -1.50 \ ATOM 57 SD MET Y 27 -24.433 90.864 372.100 1.00 -1.50 \ ATOM 58 CE MET Y 27 -23.110 89.659 372.024 1.00 -1.50 \ ATOM 59 N ILE Y 28 -25.188 87.021 367.807 1.00 0.64 \ ATOM 60 CA ILE Y 28 -24.592 86.225 366.740 1.00 0.64 \ ATOM 61 C ILE Y 28 -25.604 85.989 365.625 1.00 0.64 \ ATOM 62 O ILE Y 28 -25.262 86.039 364.437 1.00 0.64 \ ATOM 63 CB ILE Y 28 -24.044 84.902 367.306 1.00 0.64 \ ATOM 64 CG1 ILE Y 28 -22.969 85.182 368.356 1.00 0.64 \ ATOM 65 CG2 ILE Y 28 -23.475 84.034 366.192 1.00 0.64 \ ATOM 66 CD1 ILE Y 28 -22.440 83.944 369.043 1.00 0.64 \ ATOM 67 N GLY Y 29 -26.864 85.736 365.986 1.00 -1.50 \ ATOM 68 CA GLY Y 29 -27.879 85.483 364.976 1.00 -1.50 \ ATOM 69 C GLY Y 29 -28.229 86.712 364.162 1.00 -1.50 \ ATOM 70 O GLY Y 29 -28.705 86.599 363.027 1.00 -1.50 \ ATOM 71 N ILE Y 30 -28.003 87.899 364.721 1.00 0.64 \ ATOM 72 CA ILE Y 30 -28.294 89.126 363.989 1.00 0.64 \ ATOM 73 C ILE Y 30 -27.100 89.602 363.170 1.00 0.64 \ ATOM 74 O ILE Y 30 -27.269 90.447 362.278 1.00 0.64 \ ATOM 75 CB ILE Y 30 -28.754 90.245 364.942 1.00 0.64 \ ATOM 76 CG1 ILE Y 30 -29.581 91.290 364.190 1.00 0.64 \ ATOM 77 CG2 ILE Y 30 -27.560 90.907 365.597 1.00 0.64 \ ATOM 78 CD1 ILE Y 30 -30.846 90.741 363.568 1.00 0.64 \ ATOM 79 N ALA Y 31 -25.902 89.072 363.432 1.00 0.64 \ ATOM 80 CA ALA Y 31 -24.718 89.525 362.710 1.00 0.64 \ ATOM 81 C ALA Y 31 -24.797 89.167 361.231 1.00 0.64 \ ATOM 82 O ALA Y 31 -24.379 89.952 360.373 1.00 0.64 \ ATOM 83 CB ALA Y 31 -23.458 88.930 363.340 1.00 0.64 \ ATOM 84 N GLY Y 32 -25.331 87.991 360.916 1.00 0.64 \ ATOM 85 CA GLY Y 32 -25.446 87.537 359.551 1.00 0.64 \ ATOM 86 C GLY Y 32 -26.343 88.409 358.696 1.00 0.64 \ ATOM 87 O GLY Y 32 -25.900 89.015 357.715 1.00 0.64 \ ATOM 88 N PRO Y 33 -27.633 88.479 359.044 1.00 0.64 \ ATOM 89 CA PRO Y 33 -28.557 89.306 358.249 1.00 0.64 \ ATOM 90 C PRO Y 33 -28.171 90.773 358.191 1.00 0.64 \ ATOM 91 O PRO Y 33 -28.460 91.435 357.186 1.00 0.64 \ ATOM 92 CB PRO Y 33 -29.902 89.106 358.961 1.00 0.64 \ ATOM 93 CG PRO Y 33 -29.778 87.788 359.637 1.00 0.64 \ ATOM 94 CD PRO Y 33 -28.342 87.689 360.065 1.00 0.64 \ ATOM 95 N MET Y 34 -27.527 91.305 359.233 1.00 -1.50 \ ATOM 96 CA MET Y 34 -27.164 92.718 359.219 1.00 -1.50 \ ATOM 97 C MET Y 34 -26.097 93.014 358.172 1.00 -1.50 \ ATOM 98 O MET Y 34 -26.088 94.106 357.595 1.00 -1.50 \ ATOM 99 CB MET Y 34 -26.688 93.162 360.602 1.00 -1.50 \ ATOM 100 CG MET Y 34 -26.741 94.669 360.808 1.00 -1.50 \ ATOM 101 SD MET Y 34 -26.148 95.199 362.425 1.00 -1.50 \ ATOM 102 CE MET Y 34 -24.396 94.871 362.266 1.00 -1.50 \ ATOM 103 N ILE Y 35 -25.198 92.061 357.913 1.00 -1.50 \ ATOM 104 CA ILE Y 35 -24.218 92.237 356.844 1.00 -1.50 \ ATOM 105 C ILE Y 35 -24.921 92.353 355.498 1.00 -1.50 \ ATOM 106 O ILE Y 35 -24.514 93.136 354.630 1.00 -1.50 \ ATOM 107 CB ILE Y 35 -23.199 91.081 356.857 1.00 -1.50 \ ATOM 108 CG1 ILE Y 35 -22.400 91.088 358.162 1.00 -1.50 \ ATOM 109 CG2 ILE Y 35 -22.260 91.171 355.664 1.00 -1.50 \ ATOM 110 CD1 ILE Y 35 -21.445 89.923 358.298 1.00 -1.50 \ ATOM 111 N ILE Y 36 -25.994 91.583 355.307 1.00 0.64 \ ATOM 112 CA ILE Y 36 -26.765 91.673 354.071 1.00 0.64 \ ATOM 113 C ILE Y 36 -27.523 92.992 354.011 1.00 0.64 \ ATOM 114 O ILE Y 36 -27.641 93.610 352.946 1.00 0.64 \ ATOM 115 CB ILE Y 36 -27.714 90.466 353.948 1.00 0.64 \ ATOM 116 CG1 ILE Y 36 -26.925 89.156 354.016 1.00 0.64 \ ATOM 117 CG2 ILE Y 36 -28.518 90.541 352.659 1.00 0.64 \ ATOM 118 CD1 ILE Y 36 -25.866 89.025 352.947 1.00 0.64 \ ATOM 119 N PHE Y 37 -28.042 93.450 355.153 1.00 0.64 \ ATOM 120 CA PHE Y 37 -28.813 94.688 355.171 1.00 0.64 \ ATOM 121 C PHE Y 37 -27.933 95.908 354.933 1.00 0.64 \ ATOM 122 O PHE Y 37 -28.377 96.875 354.303 1.00 0.64 \ ATOM 123 CB PHE Y 37 -29.558 94.823 356.499 1.00 0.64 \ ATOM 124 CG PHE Y 37 -30.452 96.029 356.573 1.00 0.64 \ ATOM 125 CD1 PHE Y 37 -30.018 97.196 357.182 1.00 0.64 \ ATOM 126 CD2 PHE Y 37 -31.727 95.997 356.031 1.00 0.64 \ ATOM 127 CE1 PHE Y 37 -30.838 98.305 357.250 1.00 0.64 \ ATOM 128 CE2 PHE Y 37 -32.552 97.103 356.096 1.00 0.64 \ ATOM 129 CZ PHE Y 37 -32.107 98.259 356.706 1.00 0.64 \ ATOM 130 N LEU Y 38 -26.692 95.887 355.426 1.00 0.64 \ ATOM 131 CA LEU Y 38 -25.808 97.034 355.243 1.00 0.64 \ ATOM 132 C LEU Y 38 -25.411 97.200 353.782 1.00 0.64 \ ATOM 133 O LEU Y 38 -25.317 98.329 353.285 1.00 0.64 \ ATOM 134 CB LEU Y 38 -24.570 96.895 356.127 1.00 0.64 \ ATOM 135 CG LEU Y 38 -24.799 97.023 357.635 1.00 0.64 \ ATOM 136 CD1 LEU Y 38 -23.473 97.024 358.380 1.00 0.64 \ ATOM 137 CD2 LEU Y 38 -25.605 98.272 357.957 1.00 0.64 \ ATOM 138 N LEU Y 39 -25.171 96.093 353.076 1.00 0.64 \ ATOM 139 CA LEU Y 39 -24.877 96.180 351.650 1.00 0.64 \ ATOM 140 C LEU Y 39 -26.109 96.528 350.828 1.00 0.64 \ ATOM 141 O LEU Y 39 -25.969 97.068 349.726 1.00 0.64 \ ATOM 142 CB LEU Y 39 -24.272 94.869 351.145 1.00 0.64 \ ATOM 143 CG LEU Y 39 -22.752 94.721 351.245 1.00 0.64 \ ATOM 144 CD1 LEU Y 39 -22.311 94.602 352.690 1.00 0.64 \ ATOM 145 CD2 LEU Y 39 -22.273 93.525 350.437 1.00 0.64 \ ATOM 146 N ALA Y 40 -27.309 96.230 351.335 1.00 0.64 \ ATOM 147 CA ALA Y 40 -28.525 96.602 350.620 1.00 0.64 \ ATOM 148 C ALA Y 40 -28.702 98.114 350.586 1.00 0.64 \ ATOM 149 O ALA Y 40 -29.128 98.673 349.568 1.00 0.64 \ ATOM 150 CB ALA Y 40 -29.738 95.930 351.263 1.00 0.64 \ ATOM 151 N VAL Y 41 -28.383 98.793 351.689 1.00 -1.50 \ ATOM 152 CA VAL Y 41 -28.416 100.251 351.698 1.00 -1.50 \ ATOM 153 C VAL Y 41 -27.179 100.821 351.012 1.00 -1.50 \ ATOM 154 O VAL Y 41 -27.247 101.882 350.381 1.00 -1.50 \ ATOM 155 CB VAL Y 41 -28.549 100.772 353.139 1.00 -1.50 \ ATOM 156 CG1 VAL Y 41 -28.877 102.258 353.143 1.00 -1.50 \ ATOM 157 CG2 VAL Y 41 -29.607 99.981 353.895 1.00 -1.50 \ ATOM 158 N ARG Y 42 -26.041 100.132 351.118 1.00 0.64 \ ATOM 159 CA ARG Y 42 -24.814 100.539 350.444 1.00 0.64 \ ATOM 160 C ARG Y 42 -24.897 100.382 348.930 1.00 0.64 \ ATOM 161 O ARG Y 42 -24.062 100.954 348.220 1.00 0.64 \ ATOM 162 CB ARG Y 42 -23.637 99.722 350.994 1.00 0.64 \ ATOM 163 CG ARG Y 42 -22.259 100.097 350.458 1.00 0.64 \ ATOM 164 CD ARG Y 42 -21.818 101.461 350.956 1.00 0.64 \ ATOM 165 NE ARG Y 42 -21.687 101.487 352.409 1.00 0.64 \ ATOM 166 CZ ARG Y 42 -20.596 101.111 353.068 1.00 0.64 \ ATOM 167 NH1 ARG Y 42 -19.535 100.675 352.403 1.00 0.64 \ ATOM 168 NH2 ARG Y 42 -20.566 101.168 354.392 1.00 0.64 \ ATOM 169 N ARG Y 43 -25.894 99.651 348.424 1.00 -1.50 \ ATOM 170 CA ARG Y 43 -25.956 99.265 347.013 1.00 -1.50 \ ATOM 171 C ARG Y 43 -24.694 98.503 346.615 1.00 -1.50 \ ATOM 172 O ARG Y 43 -24.097 98.749 345.565 1.00 -1.50 \ ATOM 173 CB ARG Y 43 -26.175 100.477 346.101 1.00 -1.50 \ ATOM 174 CG ARG Y 43 -27.163 101.508 346.635 1.00 -1.50 \ ATOM 175 CD ARG Y 43 -28.573 100.953 346.736 1.00 -1.50 \ ATOM 176 NE ARG Y 43 -29.491 101.920 347.333 1.00 -1.50 \ ATOM 177 CZ ARG Y 43 -30.791 101.709 347.509 1.00 -1.50 \ ATOM 178 NH1 ARG Y 43 -31.548 102.647 348.062 1.00 -1.50 \ ATOM 179 NH2 ARG Y 43 -31.336 100.560 347.132 1.00 -1.50 \ ATOM 180 N GLY Y 44 -24.283 97.570 347.471 1.00 0.64 \ ATOM 181 CA GLY Y 44 -23.038 96.856 347.299 1.00 0.64 \ ATOM 182 C GLY Y 44 -23.137 95.726 346.292 1.00 0.64 \ ATOM 183 O GLY Y 44 -24.107 95.584 345.546 1.00 0.64 \ ATOM 184 N ASN Y 45 -22.091 94.899 346.284 1.00 -1.50 \ ATOM 185 CA ASN Y 45 -21.977 93.795 345.331 1.00 -1.50 \ ATOM 186 C ASN Y 45 -22.543 92.517 345.952 1.00 -1.50 \ ATOM 187 O ASN Y 45 -21.828 91.576 346.304 1.00 -1.50 \ ATOM 188 CB ASN Y 45 -20.528 93.615 344.899 1.00 -1.50 \ ATOM 189 CG ASN Y 45 -19.936 94.878 344.306 1.00 -1.50 \ ATOM 190 OD1 ASN Y 45 -20.639 95.674 343.685 1.00 -1.50 \ ATOM 191 ND2 ASN Y 45 -18.636 95.067 344.497 1.00 -1.50 \ ATOM 192 N LEU Y 46 -23.865 92.501 346.084 1.00 0.64 \ ATOM 193 CA LEU Y 46 -24.567 91.320 346.571 1.00 0.64 \ ATOM 194 C LEU Y 46 -24.811 90.343 345.427 1.00 0.64 \ ATOM 195 O LEU Y 46 -25.005 89.146 345.640 1.00 0.64 \ ATOM 196 CB LEU Y 46 -25.892 91.707 347.230 1.00 0.64 \ ATOM 197 CG LEU Y 46 -25.810 92.346 348.617 1.00 0.64 \ ATOM 198 CD1 LEU Y 46 -27.183 92.811 349.071 1.00 0.64 \ ATOM 199 CD2 LEU Y 46 -25.216 91.367 349.619 1.00 0.64 \ ATOM 200 OXT LEU Y 46 -24.817 90.730 344.258 1.00 0.64 \ """, "e5tisY1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5tisY1_csv", state=0, origin=1) cmd.zoom("e5tisY1_csv", animate=-1)