cmd.read_pdbstr("""\ ATOM 1 N PHE B 1 56.510 15.905 123.087 1.00 -1.00 \ ATOM 2 CA PHE B 1 55.466 15.996 122.076 1.00 -1.00 \ ATOM 3 C PHE B 1 54.425 14.906 122.278 1.00 -1.00 \ ATOM 4 O PHE B 1 54.775 13.759 122.592 1.00 -1.00 \ ATOM 5 CB PHE B 1 56.067 15.854 120.682 1.00 -1.00 \ ATOM 6 CG PHE B 1 56.995 16.967 120.302 1.00 -1.00 \ ATOM 7 CD1 PHE B 1 56.529 18.264 120.187 1.00 -1.00 \ ATOM 8 CD2 PHE B 1 58.330 16.713 120.035 1.00 -1.00 \ ATOM 9 CE1 PHE B 1 57.381 19.292 119.832 1.00 -1.00 \ ATOM 10 CE2 PHE B 1 59.186 17.735 119.675 1.00 -1.00 \ ATOM 11 CZ PHE B 1 58.710 19.026 119.574 1.00 -1.00 \ ATOM 12 N VAL B 2 53.149 15.248 122.062 1.00 -1.00 \ ATOM 13 CA VAL B 2 52.075 14.279 122.286 1.00 -1.00 \ ATOM 14 C VAL B 2 52.227 13.067 121.374 1.00 -1.00 \ ATOM 15 O VAL B 2 52.081 11.923 121.811 1.00 -1.00 \ ATOM 16 CB VAL B 2 50.686 14.925 122.147 1.00 -1.00 \ ATOM 17 CG1 VAL B 2 49.596 13.835 122.173 1.00 -1.00 \ ATOM 18 CG2 VAL B 2 50.461 15.932 123.259 1.00 -1.00 \ ATOM 19 N ASN B 3 52.512 13.291 120.094 1.00 -0.47 \ ATOM 20 CA ASN B 3 52.644 12.163 119.179 1.00 -0.47 \ ATOM 21 C ASN B 3 53.749 11.213 119.619 1.00 -0.47 \ ATOM 22 O ASN B 3 53.613 9.995 119.478 1.00 -0.47 \ ATOM 23 CB ASN B 3 52.897 12.667 117.765 1.00 -0.47 \ ATOM 24 CG ASN B 3 53.939 13.729 117.731 1.00 -0.47 \ ATOM 25 OD1 ASN B 3 55.097 13.468 117.403 1.00 -0.47 \ ATOM 26 ND2 ASN B 3 53.553 14.945 118.115 1.00 -0.47 \ ATOM 27 N GLN B 4 54.855 11.747 120.144 1.00 0.23 \ ATOM 28 CA GLN B 4 55.917 10.883 120.653 1.00 0.23 \ ATOM 29 C GLN B 4 55.444 10.073 121.850 1.00 0.23 \ ATOM 30 O GLN B 4 55.778 8.885 121.974 1.00 0.23 \ ATOM 31 CB GLN B 4 57.144 11.714 121.027 1.00 0.23 \ ATOM 32 CG GLN B 4 58.180 11.802 119.933 1.00 0.23 \ ATOM 33 CD GLN B 4 59.489 12.365 120.429 1.00 0.23 \ ATOM 34 OE1 GLN B 4 59.617 12.726 121.597 1.00 0.23 \ ATOM 35 NE2 GLN B 4 60.475 12.435 119.546 1.00 0.23 \ ATOM 36 N HIS B 5 54.682 10.703 122.750 1.00 -0.04 \ ATOM 37 CA HIS B 5 54.115 9.976 123.880 1.00 -0.04 \ ATOM 38 C HIS B 5 53.223 8.844 123.405 1.00 -0.04 \ ATOM 39 O HIS B 5 53.315 7.719 123.911 1.00 -0.04 \ ATOM 40 CB HIS B 5 53.324 10.917 124.792 1.00 -0.04 \ ATOM 41 CG HIS B 5 52.786 10.232 126.011 1.00 -0.04 \ ATOM 42 ND1 HIS B 5 53.529 10.070 127.162 1.00 -0.04 \ ATOM 43 CD2 HIS B 5 51.600 9.616 126.241 1.00 -0.04 \ ATOM 44 CE1 HIS B 5 52.819 9.404 128.054 1.00 -0.04 \ ATOM 45 NE2 HIS B 5 51.645 9.114 127.520 1.00 -0.04 \ ATOM 46 N LEU B 6 52.355 9.121 122.424 1.00 1.15 \ ATOM 47 CA LEU B 6 51.451 8.086 121.927 1.00 1.15 \ ATOM 48 C LEU B 6 52.226 6.978 121.230 1.00 1.15 \ ATOM 49 O LEU B 6 51.951 5.795 121.432 1.00 1.15 \ ATOM 50 CB LEU B 6 50.417 8.691 120.985 1.00 1.15 \ ATOM 51 CG LEU B 6 49.564 9.819 121.585 1.00 1.15 \ ATOM 52 CD1 LEU B 6 48.509 10.287 120.602 1.00 1.15 \ ATOM 53 CD2 LEU B 6 48.911 9.409 122.892 1.00 1.15 \ ATOM 54 N CYS B 7 53.220 7.335 120.428 1.00 1.70 \ ATOM 55 CA CYS B 7 54.006 6.306 119.771 1.00 1.70 \ ATOM 56 C CYS B 7 54.697 5.420 120.791 1.00 1.70 \ ATOM 57 O CYS B 7 54.703 4.190 120.649 1.00 1.70 \ ATOM 58 CB CYS B 7 55.033 6.973 118.859 1.00 1.70 \ ATOM 59 SG CYS B 7 56.097 5.783 117.996 1.00 1.70 \ ATOM 60 N GLY B 8 55.276 6.025 121.830 1.00 0.71 \ ATOM 61 CA GLY B 8 55.947 5.241 122.854 1.00 0.71 \ ATOM 62 C GLY B 8 55.018 4.271 123.552 1.00 0.71 \ ATOM 63 O GLY B 8 55.422 3.161 123.907 1.00 0.71 \ ATOM 64 N SER B 9 53.765 4.674 123.762 1.00 -0.48 \ ATOM 65 CA SER B 9 52.781 3.767 124.341 1.00 -0.48 \ ATOM 66 C SER B 9 52.637 2.518 123.483 1.00 -0.48 \ ATOM 67 O SER B 9 52.646 1.391 123.991 1.00 -0.48 \ ATOM 68 CB SER B 9 51.441 4.494 124.439 1.00 -0.48 \ ATOM 69 OG SER B 9 50.405 3.612 124.825 1.00 -0.48 \ ATOM 70 N HIS B 10 52.524 2.698 122.169 1.00 -0.23 \ ATOM 71 CA HIS B 10 52.414 1.549 121.283 1.00 -0.23 \ ATOM 72 C HIS B 10 53.714 0.762 121.229 1.00 -0.23 \ ATOM 73 O HIS B 10 53.687 -0.469 121.111 1.00 -0.23 \ ATOM 74 CB HIS B 10 51.980 1.982 119.883 1.00 -0.23 \ ATOM 75 CG HIS B 10 50.567 2.472 119.813 1.00 -0.23 \ ATOM 76 ND1 HIS B 10 49.508 1.631 119.558 1.00 -0.23 \ ATOM 77 CD2 HIS B 10 50.035 3.709 119.953 1.00 -0.23 \ ATOM 78 CE1 HIS B 10 48.384 2.326 119.542 1.00 -0.23 \ ATOM 79 NE2 HIS B 10 48.672 3.597 119.769 1.00 -0.23 \ ATOM 80 N LEU B 11 54.856 1.439 121.338 1.00 1.70 \ ATOM 81 CA LEU B 11 56.127 0.728 121.305 1.00 1.70 \ ATOM 82 C LEU B 11 56.288 -0.176 122.513 1.00 1.70 \ ATOM 83 O LEU B 11 56.747 -1.310 122.372 1.00 1.70 \ ATOM 84 CB LEU B 11 57.299 1.701 121.204 1.00 1.70 \ ATOM 85 CG LEU B 11 57.504 2.311 119.822 1.00 1.70 \ ATOM 86 CD1 LEU B 11 58.492 3.471 119.928 1.00 1.70 \ ATOM 87 CD2 LEU B 11 57.955 1.291 118.783 1.00 1.70 \ ATOM 88 N VAL B 12 55.912 0.288 123.711 1.00 0.71 \ ATOM 89 CA VAL B 12 56.050 -0.588 124.872 1.00 0.71 \ ATOM 90 C VAL B 12 55.118 -1.789 124.766 1.00 0.71 \ ATOM 91 O VAL B 12 55.484 -2.895 125.165 1.00 0.71 \ ATOM 92 CB VAL B 12 55.943 0.157 126.218 1.00 0.71 \ ATOM 93 CG1 VAL B 12 57.056 1.185 126.374 1.00 0.71 \ ATOM 94 CG2 VAL B 12 54.590 0.755 126.407 1.00 0.71 \ ATOM 95 N GLU B 13 53.914 -1.619 124.210 0.56 0.65 \ ATOM 96 CA GLU B 13 53.070 -2.799 124.010 0.56 0.65 \ ATOM 97 C GLU B 13 53.672 -3.746 122.980 0.56 0.65 \ ATOM 98 O GLU B 13 53.586 -4.971 123.130 0.56 0.65 \ ATOM 99 CB GLU B 13 51.641 -2.421 123.619 0.56 0.65 \ ATOM 100 CG GLU B 13 50.756 -3.639 123.252 0.56 0.65 \ ATOM 101 CD GLU B 13 50.630 -4.680 124.386 0.56 0.65 \ ATOM 102 OE1 GLU B 13 50.220 -4.292 125.497 0.56 0.65 \ ATOM 103 OE2 GLU B 13 50.922 -5.890 124.176 0.56 0.65 \ ATOM 104 N ALA B 14 54.281 -3.205 121.923 1.00 -0.00 \ ATOM 105 CA ALA B 14 54.928 -4.070 120.948 1.00 -0.00 \ ATOM 106 C ALA B 14 56.105 -4.812 121.564 1.00 -0.00 \ ATOM 107 O ALA B 14 56.256 -6.026 121.364 1.00 -0.00 \ ATOM 108 CB ALA B 14 55.361 -3.245 119.742 1.00 -0.00 \ ATOM 109 N LEU B 15 56.918 -4.121 122.361 1.00 1.70 \ ATOM 110 CA LEU B 15 58.047 -4.781 123.010 1.00 1.70 \ ATOM 111 C LEU B 15 57.575 -5.838 123.988 1.00 1.70 \ ATOM 112 O LEU B 15 58.192 -6.902 124.105 1.00 1.70 \ ATOM 113 CB LEU B 15 58.921 -3.760 123.736 1.00 1.70 \ ATOM 114 CG LEU B 15 59.676 -2.787 122.841 1.00 1.70 \ ATOM 115 CD1 LEU B 15 60.494 -1.859 123.737 1.00 1.70 \ ATOM 116 CD2 LEU B 15 60.572 -3.550 121.863 1.00 1.70 \ ATOM 117 N TYR B 16 56.500 -5.560 124.721 1.00 -0.22 \ ATOM 118 CA TYR B 16 55.998 -6.565 125.649 1.00 -0.22 \ ATOM 119 C TYR B 16 55.698 -7.859 124.913 1.00 -0.22 \ ATOM 120 O TYR B 16 56.012 -8.951 125.400 1.00 -0.22 \ ATOM 121 CB TYR B 16 54.737 -6.048 126.339 1.00 -0.22 \ ATOM 122 CG TYR B 16 54.106 -7.053 127.275 1.00 -0.22 \ ATOM 123 CD1 TYR B 16 54.664 -7.309 128.521 1.00 -0.22 \ ATOM 124 CD2 TYR B 16 52.945 -7.739 126.922 1.00 -0.22 \ ATOM 125 CE1 TYR B 16 54.095 -8.228 129.389 1.00 -0.22 \ ATOM 126 CE2 TYR B 16 52.372 -8.671 127.783 1.00 -0.22 \ ATOM 127 CZ TYR B 16 52.945 -8.896 129.015 1.00 -0.22 \ ATOM 128 OH TYR B 16 52.385 -9.806 129.880 1.00 -0.22 \ ATOM 129 N LEU B 17 55.072 -7.754 123.742 1.00 -0.23 \ ATOM 130 CA LEU B 17 54.742 -8.935 122.947 1.00 -0.23 \ ATOM 131 C LEU B 17 55.983 -9.564 122.319 1.00 -0.23 \ ATOM 132 O LEU B 17 56.179 -10.784 122.392 1.00 -0.23 \ ATOM 133 CB LEU B 17 53.732 -8.543 121.869 1.00 -0.23 \ ATOM 134 CG LEU B 17 53.321 -9.682 120.946 1.00 -0.23 \ ATOM 135 CD1 LEU B 17 52.474 -10.707 121.690 1.00 -0.23 \ ATOM 136 CD2 LEU B 17 52.594 -9.136 119.720 1.00 -0.23 \ ATOM 137 N VAL B 18 56.815 -8.752 121.664 1.00 0.28 \ ATOM 138 CA VAL B 18 57.948 -9.279 120.902 1.00 0.28 \ ATOM 139 C VAL B 18 58.984 -9.904 121.823 1.00 0.28 \ ATOM 140 O VAL B 18 59.594 -10.924 121.490 1.00 0.28 \ ATOM 141 CB VAL B 18 58.554 -8.159 120.035 1.00 0.28 \ ATOM 142 CG1 VAL B 18 59.939 -8.542 119.501 1.00 0.28 \ ATOM 143 CG2 VAL B 18 57.600 -7.796 118.904 1.00 0.28 \ ATOM 144 N CYS B 19 59.245 -9.275 122.967 1.00 1.70 \ ATOM 145 CA CYS B 19 60.360 -9.697 123.798 1.00 1.70 \ ATOM 146 C CYS B 19 60.027 -10.901 124.657 1.00 1.70 \ ATOM 147 O CYS B 19 60.945 -11.619 125.056 1.00 1.70 \ ATOM 148 CB CYS B 19 60.850 -8.535 124.650 1.00 1.70 \ ATOM 149 SG CYS B 19 61.372 -7.129 123.621 1.00 1.70 \ ATOM 150 N GLY B 20 58.751 -11.121 124.946 1.00 -0.16 \ ATOM 151 CA GLY B 20 58.339 -12.288 125.698 1.00 -0.16 \ ATOM 152 C GLY B 20 59.066 -12.406 127.008 1.00 -0.16 \ ATOM 153 O GLY B 20 59.186 -11.444 127.777 1.00 -0.16 \ ATOM 154 N GLU B 21 59.584 -13.613 127.234 1.00 0.19 \ ATOM 155 CA GLU B 21 60.273 -13.969 128.462 1.00 0.19 \ ATOM 156 C GLU B 21 61.474 -13.076 128.735 1.00 0.19 \ ATOM 157 O GLU B 21 61.852 -12.896 129.897 1.00 0.19 \ ATOM 158 CB GLU B 21 60.697 -15.442 128.382 1.00 0.19 \ ATOM 159 CG GLU B 21 61.351 -15.867 127.040 1.00 0.19 \ ATOM 160 CD GLU B 21 60.402 -15.808 125.839 1.00 0.19 \ ATOM 161 OE1 GLU B 21 60.857 -15.452 124.731 1.00 0.19 \ ATOM 162 OE2 GLU B 21 59.194 -16.078 126.015 1.00 0.19 \ ATOM 163 N ARG B 22 62.083 -12.511 127.688 1.00 -0.61 \ ATOM 164 CA ARG B 22 63.266 -11.671 127.852 1.00 -0.61 \ ATOM 165 C ARG B 22 62.943 -10.344 128.531 1.00 -0.61 \ ATOM 166 O ARG B 22 63.782 -9.799 129.258 1.00 -0.61 \ ATOM 167 CB ARG B 22 63.877 -11.386 126.480 1.00 -0.61 \ ATOM 168 CG ARG B 22 64.519 -12.585 125.800 1.00 -0.61 \ ATOM 169 CD ARG B 22 64.926 -12.249 124.370 1.00 -0.61 \ ATOM 170 NE ARG B 22 63.779 -12.193 123.466 1.00 -0.61 \ ATOM 171 CZ ARG B 22 63.850 -11.817 122.192 1.00 -0.61 \ ATOM 172 NH1 ARG B 22 65.015 -11.455 121.670 1.00 -0.61 \ ATOM 173 NH2 ARG B 22 62.755 -11.794 121.441 1.00 -0.61 \ ATOM 174 N GLY B 23 61.765 -9.797 128.295 1.00 1.70 \ ATOM 175 CA GLY B 23 61.489 -8.467 128.797 1.00 1.70 \ ATOM 176 C GLY B 23 62.314 -7.424 128.054 1.00 1.70 \ ATOM 177 O GLY B 23 62.950 -7.693 127.033 1.00 1.70 \ ATOM 178 N PHE B 24 62.291 -6.208 128.596 1.00 1.13 \ ATOM 179 CA PHE B 24 62.880 -5.056 127.923 1.00 1.13 \ ATOM 180 C PHE B 24 63.111 -3.941 128.936 1.00 1.13 \ ATOM 181 O PHE B 24 62.540 -3.943 130.023 1.00 1.13 \ ATOM 182 CB PHE B 24 62.001 -4.570 126.762 1.00 1.13 \ ATOM 183 CG PHE B 24 60.631 -4.124 127.186 1.00 1.13 \ ATOM 184 CD1 PHE B 24 59.614 -5.048 127.362 1.00 1.13 \ ATOM 185 CD2 PHE B 24 60.358 -2.783 127.416 1.00 1.13 \ ATOM 186 CE1 PHE B 24 58.348 -4.653 127.768 1.00 1.13 \ ATOM 187 CE2 PHE B 24 59.078 -2.366 127.826 1.00 1.13 \ ATOM 188 CZ PHE B 24 58.073 -3.304 127.997 1.00 1.13 \ ATOM 189 N PHE B 25 63.981 -3.000 128.570 1.00 0.52 \ ATOM 190 CA PHE B 25 64.303 -1.829 129.382 1.00 0.52 \ ATOM 191 C PHE B 25 63.922 -0.611 128.549 1.00 0.52 \ ATOM 192 O PHE B 25 64.556 -0.338 127.525 1.00 0.52 \ ATOM 193 CB PHE B 25 65.803 -1.844 129.708 1.00 0.52 \ ATOM 194 CG PHE B 25 66.273 -0.742 130.640 1.00 0.52 \ ATOM 195 CD1 PHE B 25 67.633 -0.500 130.788 1.00 0.52 \ ATOM 196 CD2 PHE B 25 65.379 0.023 131.375 1.00 0.52 \ ATOM 197 CE1 PHE B 25 68.096 0.494 131.633 1.00 0.52 \ ATOM 198 CE2 PHE B 25 65.831 1.020 132.225 1.00 0.52 \ ATOM 199 CZ PHE B 25 67.189 1.257 132.356 1.00 0.52 \ ATOM 200 N TYR B 26 62.861 0.089 128.953 1.00 -0.24 \ ATOM 201 CA TYR B 26 62.368 1.253 128.226 1.00 -0.24 \ ATOM 202 C TYR B 26 62.881 2.511 128.914 1.00 -0.24 \ ATOM 203 O TYR B 26 62.687 2.682 130.123 1.00 -0.24 \ ATOM 204 CB TYR B 26 60.833 1.256 128.108 1.00 -0.24 \ ATOM 205 CG TYR B 26 60.338 2.398 127.223 1.00 -0.24 \ ATOM 206 CD1 TYR B 26 60.331 2.270 125.843 1.00 -0.24 \ ATOM 207 CD2 TYR B 26 59.895 3.594 127.756 1.00 -0.24 \ ATOM 208 CE1 TYR B 26 59.923 3.311 125.015 1.00 -0.24 \ ATOM 209 CE2 TYR B 26 59.472 4.641 126.933 1.00 -0.24 \ ATOM 210 CZ TYR B 26 59.485 4.494 125.562 1.00 -0.24 \ ATOM 211 OH TYR B 26 59.061 5.526 124.741 1.00 -0.24 \ ATOM 212 N THR B 27 63.553 3.367 128.152 1.00 -0.98 \ ATOM 213 CA THR B 27 64.070 4.634 128.647 1.00 -0.98 \ ATOM 214 C THR B 27 63.626 5.757 127.716 1.00 -0.98 \ ATOM 215 O THR B 27 63.288 5.520 126.553 1.00 -0.98 \ ATOM 216 CB THR B 27 65.598 4.611 128.796 1.00 -0.98 \ ATOM 217 OG1 THR B 27 66.210 4.408 127.516 1.00 -0.98 \ ATOM 218 CG2 THR B 27 66.025 3.502 129.748 1.00 -0.98 \ ATOM 219 N LYS B 28 63.628 6.992 128.237 1.00 -0.77 \ ATOM 220 CA LYS B 28 62.979 8.079 127.515 1.00 -0.77 \ ATOM 221 C LYS B 28 63.987 8.940 126.769 1.00 -0.77 \ ATOM 222 O LYS B 28 65.170 8.978 127.117 1.00 -0.77 \ ATOM 223 CB LYS B 28 62.167 8.951 128.483 1.00 -0.77 \ ATOM 224 CG LYS B 28 60.830 8.343 128.883 1.00 -0.77 \ ATOM 225 CD LYS B 28 59.679 8.918 128.070 1.00 -0.77 \ ATOM 226 CE LYS B 28 58.348 8.333 128.520 1.00 -0.77 \ ATOM 227 NZ LYS B 28 57.186 8.918 127.793 1.00 -0.77 \ ATOM 228 N PRO B 29 63.545 9.650 125.711 1.00 -0.94 \ ATOM 229 CA PRO B 29 64.416 10.540 124.933 1.00 -0.94 \ ATOM 230 C PRO B 29 64.804 11.793 125.711 1.00 -0.94 \ ATOM 231 O PRO B 29 65.682 11.716 126.568 1.00 -0.94 \ ATOM 232 CB PRO B 29 63.543 10.927 123.729 1.00 -0.94 \ ATOM 233 CG PRO B 29 62.429 9.924 123.703 1.00 -0.94 \ ATOM 234 CD PRO B 29 62.193 9.573 125.132 1.00 -0.94 \ """, "e5udpB1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5udpB1_csv", state=0, origin=1) cmd.zoom("e5udpB1_csv", animate=-1)