cmd.read_pdbstr("""\ ATOM 1 N PHE J 1 54.497 4.675 106.986 1.00 -1.00 \ ATOM 2 CA PHE J 1 54.221 5.853 107.797 1.00 -1.00 \ ATOM 3 C PHE J 1 53.707 5.411 109.162 1.00 -1.00 \ ATOM 4 O PHE J 1 52.701 4.696 109.255 1.00 -1.00 \ ATOM 5 CB PHE J 1 53.174 6.757 107.132 1.00 -1.00 \ ATOM 6 CG PHE J 1 53.548 7.211 105.741 1.00 -1.00 \ ATOM 7 CD1 PHE J 1 54.302 8.355 105.551 1.00 -1.00 \ ATOM 8 CD2 PHE J 1 53.115 6.506 104.631 1.00 -1.00 \ ATOM 9 CE1 PHE J 1 54.646 8.768 104.271 1.00 -1.00 \ ATOM 10 CE2 PHE J 1 53.442 6.916 103.359 1.00 -1.00 \ ATOM 11 CZ PHE J 1 54.212 8.050 103.177 1.00 -1.00 \ ATOM 12 N VAL J 2 54.378 5.851 110.230 1.00 -1.00 \ ATOM 13 CA VAL J 2 53.947 5.455 111.572 1.00 -1.00 \ ATOM 14 C VAL J 2 52.560 5.998 111.917 1.00 -1.00 \ ATOM 15 O VAL J 2 51.792 5.323 112.616 1.00 -1.00 \ ATOM 16 CB VAL J 2 55.013 5.791 112.634 1.00 -1.00 \ ATOM 17 CG1 VAL J 2 54.469 5.687 114.052 1.00 -1.00 \ ATOM 18 CG2 VAL J 2 56.218 4.877 112.470 1.00 -1.00 \ ATOM 19 N ASN J 3 52.199 7.207 111.453 1.00 -0.46 \ ATOM 20 CA ASN J 3 50.876 7.717 111.802 1.00 -0.46 \ ATOM 21 C ASN J 3 49.776 6.763 111.332 1.00 -0.46 \ ATOM 22 O ASN J 3 48.851 6.441 112.092 1.00 -0.46 \ ATOM 23 CB ASN J 3 50.669 9.183 111.362 1.00 -0.46 \ ATOM 24 CG ASN J 3 50.722 9.406 109.852 1.00 -0.46 \ ATOM 25 OD1 ASN J 3 51.117 8.547 109.071 1.00 -0.46 \ ATOM 26 ND2 ASN J 3 50.324 10.611 109.446 1.00 -0.46 \ ATOM 27 N GLN J 4 49.889 6.265 110.100 0.38 0.23 \ ATOM 28 CA GLN J 4 48.914 5.308 109.589 0.38 0.23 \ ATOM 29 C GLN J 4 49.008 3.971 110.315 0.38 0.23 \ ATOM 30 O GLN J 4 47.997 3.273 110.462 0.38 0.23 \ ATOM 31 CB GLN J 4 49.093 5.149 108.075 0.38 0.23 \ ATOM 32 CG GLN J 4 48.541 3.862 107.491 0.38 0.23 \ ATOM 33 CD GLN J 4 49.620 2.812 107.270 0.38 0.23 \ ATOM 34 OE1 GLN J 4 50.622 3.065 106.599 0.38 0.23 \ ATOM 35 NE2 GLN J 4 49.420 1.630 107.840 0.38 0.23 \ ATOM 36 N HIS J 5 50.201 3.604 110.789 1.00 -0.05 \ ATOM 37 CA HIS J 5 50.338 2.383 111.570 1.00 -0.05 \ ATOM 38 C HIS J 5 49.585 2.499 112.892 1.00 -0.05 \ ATOM 39 O HIS J 5 48.852 1.585 113.290 1.00 -0.05 \ ATOM 40 CB HIS J 5 51.814 2.070 111.818 1.00 -0.05 \ ATOM 41 CG HIS J 5 52.010 0.785 112.555 1.00 -0.05 \ ATOM 42 ND1 HIS J 5 51.852 -0.447 111.959 1.00 -0.05 \ ATOM 43 CD2 HIS J 5 52.261 0.547 113.864 1.00 -0.05 \ ATOM 44 CE1 HIS J 5 52.037 -1.391 112.866 1.00 -0.05 \ ATOM 45 NE2 HIS J 5 52.283 -0.816 114.030 1.00 -0.05 \ ATOM 46 N LEU J 6 49.750 3.622 113.592 1.00 1.11 \ ATOM 47 CA LEU J 6 49.059 3.818 114.864 1.00 1.11 \ ATOM 48 C LEU J 6 47.552 3.926 114.662 1.00 1.11 \ ATOM 49 O LEU J 6 46.770 3.346 115.432 1.00 1.11 \ ATOM 50 CB LEU J 6 49.608 5.065 115.569 1.00 1.11 \ ATOM 51 CG LEU J 6 51.128 5.080 115.824 1.00 1.11 \ ATOM 52 CD1 LEU J 6 51.573 6.365 116.525 1.00 1.11 \ ATOM 53 CD2 LEU J 6 51.529 3.871 116.642 1.00 1.11 \ ATOM 54 N CYS J 7 47.122 4.684 113.649 1.00 1.72 \ ATOM 55 CA CYS J 7 45.695 4.795 113.373 1.00 1.72 \ ATOM 56 C CYS J 7 45.094 3.422 113.106 1.00 1.72 \ ATOM 57 O CYS J 7 44.032 3.086 113.642 1.00 1.72 \ ATOM 58 CB CYS J 7 45.463 5.740 112.187 1.00 1.72 \ ATOM 59 SG CYS J 7 43.719 5.860 111.737 1.00 1.72 \ ATOM 60 N GLY J 8 45.781 2.608 112.291 1.00 0.65 \ ATOM 61 CA GLY J 8 45.277 1.277 111.971 1.00 0.65 \ ATOM 62 C GLY J 8 45.089 0.400 113.193 1.00 0.65 \ ATOM 63 O GLY J 8 44.145 -0.401 113.259 1.00 0.65 \ ATOM 64 N SER J 9 45.987 0.527 114.171 0.65 -0.48 \ ATOM 65 CA SER J 9 45.847 -0.224 115.413 0.65 -0.48 \ ATOM 66 C SER J 9 44.524 0.107 116.087 0.65 -0.48 \ ATOM 67 O SER J 9 43.777 -0.787 116.502 0.65 -0.48 \ ATOM 68 CB SER J 9 47.025 0.094 116.337 0.65 -0.48 \ ATOM 69 OG SER J 9 46.948 -0.661 117.539 0.65 -0.48 \ ATOM 70 N HIS J 10 44.195 1.395 116.156 1.00 -0.22 \ ATOM 71 CA HIS J 10 42.926 1.798 116.740 1.00 -0.22 \ ATOM 72 C HIS J 10 41.747 1.375 115.869 1.00 -0.22 \ ATOM 73 O HIS J 10 40.691 1.030 116.401 1.00 -0.22 \ ATOM 74 CB HIS J 10 42.942 3.307 116.991 1.00 -0.22 \ ATOM 75 CG HIS J 10 43.874 3.714 118.084 1.00 -0.22 \ ATOM 76 ND1 HIS J 10 43.519 3.661 119.416 1.00 -0.22 \ ATOM 77 CD2 HIS J 10 45.152 4.159 118.052 1.00 -0.22 \ ATOM 78 CE1 HIS J 10 44.531 4.079 120.156 1.00 -0.22 \ ATOM 79 NE2 HIS J 10 45.531 4.395 119.351 1.00 -0.22 \ ATOM 80 N LEU J 11 41.908 1.375 114.543 1.00 1.72 \ ATOM 81 CA LEU J 11 40.831 0.919 113.667 1.00 1.72 \ ATOM 82 C LEU J 11 40.507 -0.550 113.900 1.00 1.72 \ ATOM 83 O LEU J 11 39.330 -0.935 113.935 1.00 1.72 \ ATOM 84 CB LEU J 11 41.196 1.143 112.201 1.00 1.72 \ ATOM 85 CG LEU J 11 41.081 2.581 111.686 1.00 1.72 \ ATOM 86 CD1 LEU J 11 41.646 2.686 110.278 1.00 1.72 \ ATOM 87 CD2 LEU J 11 39.616 3.033 111.717 1.00 1.72 \ ATOM 88 N VAL J 12 41.527 -1.394 114.055 1.00 0.65 \ ATOM 89 CA VAL J 12 41.215 -2.804 114.260 1.00 0.65 \ ATOM 90 C VAL J 12 40.532 -3.024 115.605 1.00 0.65 \ ATOM 91 O VAL J 12 39.649 -3.879 115.727 1.00 0.65 \ ATOM 92 CB VAL J 12 42.419 -3.736 114.024 1.00 0.65 \ ATOM 93 CG1 VAL J 12 42.925 -3.609 112.617 1.00 0.65 \ ATOM 94 CG2 VAL J 12 43.501 -3.516 115.016 1.00 0.65 \ ATOM 95 N GLU J 13 40.928 -2.264 116.630 0.45 0.69 \ ATOM 96 CA GLU J 13 40.223 -2.327 117.907 0.45 0.69 \ ATOM 97 C GLU J 13 38.760 -1.924 117.747 0.45 0.69 \ ATOM 98 O GLU J 13 37.863 -2.564 118.309 0.45 0.69 \ ATOM 99 CB GLU J 13 40.923 -1.433 118.931 0.45 0.69 \ ATOM 100 CG GLU J 13 42.252 -1.981 119.422 0.45 0.69 \ ATOM 101 CD GLU J 13 42.931 -1.072 120.436 0.45 0.69 \ ATOM 102 OE1 GLU J 13 43.307 0.071 120.083 0.45 0.69 \ ATOM 103 OE2 GLU J 13 43.085 -1.503 121.597 0.45 0.69 \ ATOM 104 N ALA J 14 38.501 -0.863 116.982 1.00 -0.05 \ ATOM 105 CA ALA J 14 37.132 -0.415 116.762 1.00 -0.05 \ ATOM 106 C ALA J 14 36.336 -1.459 115.984 1.00 -0.05 \ ATOM 107 O ALA J 14 35.168 -1.732 116.303 1.00 -0.05 \ ATOM 108 CB ALA J 14 37.150 0.928 116.033 1.00 -0.05 \ ATOM 109 N LEU J 15 36.952 -2.061 114.962 1.00 1.72 \ ATOM 110 CA LEU J 15 36.262 -3.085 114.180 1.00 1.72 \ ATOM 111 C LEU J 15 35.981 -4.320 115.021 1.00 1.72 \ ATOM 112 O LEU J 15 34.938 -4.963 114.857 1.00 1.72 \ ATOM 113 CB LEU J 15 37.085 -3.456 112.949 1.00 1.72 \ ATOM 114 CG LEU J 15 37.176 -2.391 111.852 1.00 1.72 \ ATOM 115 CD1 LEU J 15 38.073 -2.858 110.713 1.00 1.72 \ ATOM 116 CD2 LEU J 15 35.787 -2.074 111.339 1.00 1.72 \ ATOM 117 N TYR J 16 36.891 -4.665 115.929 1.00 -0.23 \ ATOM 118 CA TYR J 16 36.638 -5.781 116.833 1.00 -0.23 \ ATOM 119 C TYR J 16 35.359 -5.549 117.624 1.00 -0.23 \ ATOM 120 O TYR J 16 34.537 -6.465 117.784 1.00 -0.23 \ ATOM 121 CB TYR J 16 37.833 -5.963 117.765 1.00 -0.23 \ ATOM 122 CG TYR J 16 37.672 -7.089 118.762 1.00 -0.23 \ ATOM 123 CD1 TYR J 16 37.806 -8.412 118.362 1.00 -0.23 \ ATOM 124 CD2 TYR J 16 37.417 -6.831 120.108 1.00 -0.23 \ ATOM 125 CE1 TYR J 16 37.677 -9.449 119.263 1.00 -0.23 \ ATOM 126 CE2 TYR J 16 37.284 -7.863 121.023 1.00 -0.23 \ ATOM 127 CZ TYR J 16 37.418 -9.171 120.593 1.00 -0.23 \ ATOM 128 OH TYR J 16 37.297 -10.212 121.491 1.00 -0.23 \ ATOM 129 N LEU J 17 35.177 -4.326 118.132 0.43 -0.22 \ ATOM 130 CA LEU J 17 33.964 -3.989 118.872 0.43 -0.22 \ ATOM 131 C LEU J 17 32.749 -3.987 117.956 0.43 -0.22 \ ATOM 132 O LEU J 17 31.746 -4.656 118.232 0.43 -0.22 \ ATOM 133 CB LEU J 17 34.112 -2.615 119.533 0.43 -0.22 \ ATOM 134 CG LEU J 17 32.863 -2.103 120.265 0.43 -0.22 \ ATOM 135 CD1 LEU J 17 32.746 -2.735 121.634 0.43 -0.22 \ ATOM 136 CD2 LEU J 17 32.868 -0.586 120.376 0.43 -0.22 \ ATOM 137 N VAL J 18 32.831 -3.245 116.851 1.00 0.22 \ ATOM 138 CA VAL J 18 31.656 -2.999 116.018 1.00 0.22 \ ATOM 139 C VAL J 18 31.195 -4.265 115.311 1.00 0.22 \ ATOM 140 O VAL J 18 29.991 -4.538 115.222 1.00 0.22 \ ATOM 141 CB VAL J 18 31.973 -1.873 115.021 1.00 0.22 \ ATOM 142 CG1 VAL J 18 30.863 -1.750 114.011 1.00 0.22 \ ATOM 143 CG2 VAL J 18 32.172 -0.564 115.755 1.00 0.22 \ ATOM 144 N CYS J 19 32.132 -5.040 114.777 1.00 1.72 \ ATOM 145 CA CYS J 19 31.775 -6.164 113.925 1.00 1.72 \ ATOM 146 C CYS J 19 31.350 -7.397 114.716 1.00 1.72 \ ATOM 147 O CYS J 19 30.594 -8.218 114.187 1.00 1.72 \ ATOM 148 CB CYS J 19 32.921 -6.465 112.957 1.00 1.72 \ ATOM 149 SG CYS J 19 33.401 -5.040 111.928 1.00 1.72 \ ATOM 150 N GLY J 20 31.800 -7.535 115.963 1.00 -0.22 \ ATOM 151 CA GLY J 20 31.308 -8.610 116.814 1.00 -0.22 \ ATOM 152 C GLY J 20 31.577 -9.977 116.219 1.00 -0.22 \ ATOM 153 O GLY J 20 32.687 -10.278 115.765 1.00 -0.22 \ ATOM 154 N GLU J 21 30.542 -10.824 116.214 1.00 0.20 \ ATOM 155 CA GLU J 21 30.679 -12.164 115.657 1.00 0.20 \ ATOM 156 C GLU J 21 30.894 -12.152 114.149 1.00 0.20 \ ATOM 157 O GLU J 21 31.416 -13.131 113.605 1.00 0.20 \ ATOM 158 CB GLU J 21 29.453 -13.009 116.011 1.00 0.20 \ ATOM 159 CG GLU J 21 29.209 -13.168 117.508 1.00 0.20 \ ATOM 160 CD GLU J 21 30.130 -14.187 118.159 1.00 0.20 \ ATOM 161 OE1 GLU J 21 31.366 -14.060 118.029 1.00 0.20 \ ATOM 162 OE2 GLU J 21 29.611 -15.123 118.804 1.00 0.20 \ ATOM 163 N ARG J 22 30.508 -11.071 113.463 1.00 -0.65 \ ATOM 164 CA ARG J 22 30.700 -11.007 112.018 1.00 -0.65 \ ATOM 165 C ARG J 22 32.173 -11.078 111.644 1.00 -0.65 \ ATOM 166 O ARG J 22 32.525 -11.661 110.613 1.00 -0.65 \ ATOM 167 CB ARG J 22 30.092 -9.722 111.455 1.00 -0.65 \ ATOM 168 CG ARG J 22 28.579 -9.705 111.388 1.00 -0.65 \ ATOM 169 CD ARG J 22 28.081 -8.388 110.816 1.00 -0.65 \ ATOM 170 NE ARG J 22 28.223 -7.286 111.764 1.00 -0.65 \ ATOM 171 CZ ARG J 22 27.968 -6.014 111.473 1.00 -0.65 \ ATOM 172 NH1 ARG J 22 27.563 -5.681 110.255 1.00 -0.65 \ ATOM 173 NH2 ARG J 22 28.121 -5.076 112.397 1.00 -0.65 \ ATOM 174 N GLY J 23 33.043 -10.501 112.460 1.00 1.72 \ ATOM 175 CA GLY J 23 34.445 -10.424 112.115 1.00 1.72 \ ATOM 176 C GLY J 23 34.691 -9.396 111.024 1.00 1.72 \ ATOM 177 O GLY J 23 33.793 -8.689 110.565 1.00 1.72 \ ATOM 178 N PHE J 24 35.950 -9.332 110.599 1.00 1.10 \ ATOM 179 CA PHE J 24 36.385 -8.333 109.633 1.00 1.10 \ ATOM 180 C PHE J 24 37.698 -8.794 109.021 1.00 1.10 \ ATOM 181 O PHE J 24 38.378 -9.676 109.553 1.00 1.10 \ ATOM 182 CB PHE J 24 36.559 -6.957 110.292 1.00 1.10 \ ATOM 183 CG PHE J 24 37.588 -6.933 111.395 1.00 1.10 \ ATOM 184 CD1 PHE J 24 37.236 -7.242 112.701 1.00 1.10 \ ATOM 185 CD2 PHE J 24 38.904 -6.584 111.127 1.00 1.10 \ ATOM 186 CE1 PHE J 24 38.186 -7.217 113.717 1.00 1.10 \ ATOM 187 CE2 PHE J 24 39.850 -6.564 112.132 1.00 1.10 \ ATOM 188 CZ PHE J 24 39.493 -6.877 113.428 1.00 1.10 \ ATOM 189 N PHE J 25 38.049 -8.180 107.896 1.00 0.52 \ ATOM 190 CA PHE J 25 39.324 -8.414 107.239 1.00 0.52 \ ATOM 191 C PHE J 25 40.114 -7.114 107.223 1.00 0.52 \ ATOM 192 O PHE J 25 39.542 -6.032 107.060 1.00 0.52 \ ATOM 193 CB PHE J 25 39.122 -8.920 105.805 1.00 0.52 \ ATOM 194 N TYR J 26 41.425 -7.222 107.408 1.00 -0.25 \ ATOM 195 CA TYR J 26 42.286 -6.047 107.371 1.00 -0.25 \ ATOM 196 C TYR J 26 43.484 -6.267 106.456 1.00 -0.25 \ ATOM 197 O TYR J 26 44.364 -7.069 106.761 1.00 -0.25 \ ATOM 198 CB TYR J 26 42.758 -5.665 108.775 1.00 -0.25 \ ATOM 199 CG TYR J 26 43.207 -4.226 108.865 1.00 -0.25 \ ATOM 200 CD1 TYR J 26 44.523 -3.872 108.601 1.00 -0.25 \ ATOM 201 CD2 TYR J 26 42.309 -3.219 109.196 1.00 -0.25 \ ATOM 202 CE1 TYR J 26 44.935 -2.557 108.671 1.00 -0.25 \ ATOM 203 CE2 TYR J 26 42.712 -1.900 109.272 1.00 -0.25 \ ATOM 204 CZ TYR J 26 44.026 -1.575 109.009 1.00 -0.25 \ ATOM 205 OH TYR J 26 44.433 -0.264 109.080 1.00 -0.25 \ """, "e5udpH1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5udpH1_csv", state=0, origin=1) cmd.zoom("e5udpH1_csv", animate=-1)