cmd.read_pdbstr("""\ ATOM 1 N PHE D 1 -12.655 -15.099 67.645 1.00 -1.00 \ ATOM 2 CA PHE D 1 -13.988 -15.426 67.151 1.00 -1.00 \ ATOM 3 C PHE D 1 -14.898 -14.202 67.183 1.00 -1.00 \ ATOM 4 O PHE D 1 -15.623 -13.973 68.154 1.00 -1.00 \ ATOM 5 CB PHE D 1 -14.602 -16.562 67.968 1.00 -1.00 \ ATOM 6 N VAL D 2 -14.856 -13.426 66.107 1.00 -1.00 \ ATOM 7 CA VAL D 2 -15.632 -12.201 66.013 1.00 -1.00 \ ATOM 8 C VAL D 2 -17.133 -12.457 66.120 1.00 -1.00 \ ATOM 9 O VAL D 2 -17.822 -11.711 66.790 1.00 -1.00 \ ATOM 10 CB VAL D 2 -15.278 -11.402 64.740 1.00 -1.00 \ ATOM 11 CG1 VAL D 2 -16.282 -10.300 64.507 1.00 -1.00 \ ATOM 12 CG2 VAL D 2 -13.870 -10.827 64.858 1.00 -1.00 \ ATOM 13 N ASN D 3 -17.636 -13.520 65.499 1.00 -0.47 \ ATOM 14 CA ASN D 3 -19.059 -13.864 65.591 1.00 -0.47 \ ATOM 15 C ASN D 3 -19.544 -13.921 67.027 1.00 -0.47 \ ATOM 16 O ASN D 3 -20.586 -13.353 67.373 1.00 -0.47 \ ATOM 17 CB ASN D 3 -19.349 -15.222 64.940 1.00 -0.47 \ ATOM 18 CG ASN D 3 -19.437 -15.145 63.438 1.00 -0.47 \ ATOM 19 OD1 ASN D 3 -19.397 -14.062 62.857 1.00 -0.47 \ ATOM 20 ND2 ASN D 3 -19.572 -16.305 62.793 1.00 -0.47 \ ATOM 21 N GLN D 4 -18.792 -14.610 67.874 1.00 0.23 \ ATOM 22 CA GLN D 4 -19.168 -14.755 69.268 1.00 0.23 \ ATOM 23 C GLN D 4 -19.024 -13.434 69.994 1.00 0.23 \ ATOM 24 O GLN D 4 -19.795 -13.142 70.907 1.00 0.23 \ ATOM 25 CB GLN D 4 -18.327 -15.836 69.941 1.00 0.23 \ ATOM 26 CG GLN D 4 -18.661 -17.229 69.459 1.00 0.23 \ ATOM 27 N HIS D 5 -18.036 -12.639 69.600 1.00 -0.04 \ ATOM 28 CA HIS D 5 -17.844 -11.332 70.217 1.00 -0.04 \ ATOM 29 C HIS D 5 -19.065 -10.457 69.966 1.00 -0.04 \ ATOM 30 O HIS D 5 -19.582 -9.800 70.875 1.00 -0.04 \ ATOM 31 CB HIS D 5 -16.575 -10.673 69.666 1.00 -0.04 \ ATOM 32 CG HIS D 5 -16.193 -9.402 70.364 1.00 -0.04 \ ATOM 33 ND1 HIS D 5 -15.834 -9.359 71.694 1.00 -0.04 \ ATOM 34 CD2 HIS D 5 -16.107 -8.128 69.911 1.00 -0.04 \ ATOM 35 CE1 HIS D 5 -15.550 -8.115 72.032 1.00 -0.04 \ ATOM 36 NE2 HIS D 5 -15.707 -7.348 70.968 1.00 -0.04 \ ATOM 37 N LEU D 6 -19.543 -10.464 68.731 1.00 1.14 \ ATOM 38 CA LEU D 6 -20.722 -9.674 68.373 1.00 1.14 \ ATOM 39 C LEU D 6 -21.974 -10.214 69.059 1.00 1.14 \ ATOM 40 O LEU D 6 -22.775 -9.448 69.620 1.00 1.14 \ ATOM 41 CB LEU D 6 -20.912 -9.651 66.849 1.00 1.14 \ ATOM 42 CG LEU D 6 -19.771 -9.078 66.004 1.00 1.14 \ ATOM 43 CD1 LEU D 6 -20.215 -8.984 64.558 1.00 1.14 \ ATOM 44 CD2 LEU D 6 -19.302 -7.709 66.508 1.00 1.14 \ ATOM 45 N CYS D 7 -22.153 -11.525 69.040 1.00 1.71 \ ATOM 46 CA CYS D 7 -23.279 -12.144 69.734 1.00 1.71 \ ATOM 47 C CYS D 7 -23.291 -11.780 71.215 1.00 1.71 \ ATOM 48 O CYS D 7 -24.337 -11.426 71.771 1.00 1.71 \ ATOM 49 CB CYS D 7 -23.248 -13.667 69.557 1.00 1.71 \ ATOM 50 SG CYS D 7 -24.534 -14.555 70.504 1.00 1.71 \ ATOM 51 N GLY D 8 -22.122 -11.835 71.845 1.00 0.69 \ ATOM 52 CA GLY D 8 -22.017 -11.559 73.267 1.00 0.69 \ ATOM 53 C GLY D 8 -22.464 -10.160 73.623 1.00 0.69 \ ATOM 54 O GLY D 8 -23.030 -9.926 74.683 1.00 0.69 \ ATOM 55 N SER D 9 -22.207 -9.213 72.735 1.00 -0.48 \ ATOM 56 CA SER D 9 -22.639 -7.841 72.954 1.00 -0.48 \ ATOM 57 C SER D 9 -24.162 -7.788 73.058 1.00 -0.48 \ ATOM 58 O SER D 9 -24.723 -7.125 73.935 1.00 -0.48 \ ATOM 59 CB SER D 9 -22.157 -6.965 71.800 1.00 -0.48 \ ATOM 60 OG SER D 9 -22.700 -5.665 71.925 1.00 -0.48 \ ATOM 61 N HIS D 10 -24.841 -8.490 72.163 1.00 -0.23 \ ATOM 62 CA HIS D 10 -26.298 -8.568 72.211 1.00 -0.23 \ ATOM 63 C HIS D 10 -26.794 -9.374 73.404 1.00 -0.23 \ ATOM 64 O HIS D 10 -27.822 -9.029 73.994 1.00 -0.23 \ ATOM 65 CB HIS D 10 -26.848 -9.136 70.900 1.00 -0.23 \ ATOM 66 CG HIS D 10 -26.648 -8.229 69.727 1.00 -0.23 \ ATOM 67 ND1 HIS D 10 -27.564 -7.274 69.349 1.00 -0.23 \ ATOM 68 CD2 HIS D 10 -25.630 -8.144 68.830 1.00 -0.23 \ ATOM 69 CE1 HIS D 10 -27.117 -6.625 68.286 1.00 -0.23 \ ATOM 70 NE2 HIS D 10 -25.950 -7.143 67.938 1.00 -0.23 \ ATOM 71 N LEU D 11 -26.064 -10.416 73.795 1.00 1.71 \ ATOM 72 CA LEU D 11 -26.455 -11.206 74.960 1.00 1.71 \ ATOM 73 C LEU D 11 -26.410 -10.373 76.223 1.00 1.71 \ ATOM 74 O LEU D 11 -27.312 -10.460 77.042 1.00 1.71 \ ATOM 75 CB LEU D 11 -25.561 -12.437 75.138 1.00 1.71 \ ATOM 76 CG LEU D 11 -25.836 -13.651 74.262 1.00 1.71 \ ATOM 77 CD1 LEU D 11 -24.806 -14.702 74.579 1.00 1.71 \ ATOM 78 CD2 LEU D 11 -27.233 -14.184 74.522 1.00 1.71 \ ATOM 79 N VAL D 12 -25.370 -9.579 76.417 1.00 0.69 \ ATOM 80 CA VAL D 12 -25.316 -8.802 77.648 0.52 0.69 \ ATOM 81 C VAL D 12 -26.412 -7.744 77.659 1.00 0.69 \ ATOM 82 O VAL D 12 -26.991 -7.471 78.724 1.00 0.69 \ ATOM 83 CB VAL D 12 -23.922 -8.198 77.939 0.52 0.69 \ ATOM 84 CG1 VAL D 12 -22.877 -9.305 78.046 0.52 0.69 \ ATOM 85 CG2 VAL D 12 -23.534 -7.183 76.890 0.52 0.69 \ ATOM 86 N GLU D 13 -26.747 -7.175 76.502 1.00 0.66 \ ATOM 87 CA GLU D 13 -27.874 -6.252 76.421 1.00 0.66 \ ATOM 88 C GLU D 13 -29.173 -6.959 76.818 1.00 0.66 \ ATOM 89 O GLU D 13 -29.989 -6.421 77.573 1.00 0.66 \ ATOM 90 CB GLU D 13 -27.999 -5.714 74.992 1.00 0.66 \ ATOM 91 CG GLU D 13 -29.066 -4.676 74.850 1.00 0.66 \ ATOM 92 CD GLU D 13 -28.607 -3.367 75.402 1.00 0.66 \ ATOM 93 OE1 GLU D 13 -27.580 -2.846 74.903 1.00 0.66 \ ATOM 94 OE2 GLU D 13 -29.255 -2.876 76.340 1.00 0.66 \ ATOM 95 N ALA D 14 -29.353 -8.179 76.335 1.00 -0.03 \ ATOM 96 CA ALA D 14 -30.560 -8.943 76.621 1.00 -0.03 \ ATOM 97 C ALA D 14 -30.638 -9.297 78.100 1.00 -0.03 \ ATOM 98 O ALA D 14 -31.690 -9.139 78.719 1.00 -0.03 \ ATOM 99 CB ALA D 14 -30.598 -10.214 75.766 1.00 -0.03 \ ATOM 100 N LEU D 15 -29.523 -9.728 78.687 1.00 1.71 \ ATOM 101 CA LEU D 15 -29.495 -10.062 80.112 1.00 1.71 \ ATOM 102 C LEU D 15 -29.768 -8.817 80.948 1.00 1.71 \ ATOM 103 O LEU D 15 -30.449 -8.872 81.981 1.00 1.71 \ ATOM 104 CB LEU D 15 -28.134 -10.635 80.505 1.00 1.71 \ ATOM 105 CG LEU D 15 -27.854 -12.043 79.995 1.00 1.71 \ ATOM 106 CD1 LEU D 15 -26.479 -12.476 80.429 1.00 1.71 \ ATOM 107 CD2 LEU D 15 -28.903 -13.036 80.523 1.00 1.71 \ ATOM 108 N TYR D 16 -29.269 -7.672 80.513 1.00 -0.22 \ ATOM 109 CA TYR D 16 -29.474 -6.454 81.273 1.00 -0.22 \ ATOM 110 C TYR D 16 -30.973 -6.202 81.398 1.00 -0.22 \ ATOM 111 O TYR D 16 -31.483 -5.875 82.483 1.00 -0.22 \ ATOM 112 CB TYR D 16 -28.767 -5.282 80.576 1.00 -0.22 \ ATOM 113 CG TYR D 16 -29.045 -3.940 81.213 1.00 -0.22 \ ATOM 114 CD1 TYR D 16 -28.451 -3.586 82.416 1.00 -0.22 \ ATOM 115 CD2 TYR D 16 -29.923 -3.045 80.632 1.00 -0.22 \ ATOM 116 CE1 TYR D 16 -28.709 -2.368 83.008 1.00 -0.22 \ ATOM 117 CE2 TYR D 16 -30.179 -1.821 81.217 1.00 -0.22 \ ATOM 118 CZ TYR D 16 -29.567 -1.494 82.396 1.00 -0.22 \ ATOM 119 OH TYR D 16 -29.825 -0.283 82.994 1.00 -0.22 \ ATOM 120 N LEU D 17 -31.700 -6.349 80.296 1.00 -0.23 \ ATOM 121 CA LEU D 17 -33.143 -6.133 80.292 1.00 -0.23 \ ATOM 122 C LEU D 17 -33.883 -7.208 81.084 1.00 -0.23 \ ATOM 123 O LEU D 17 -34.709 -6.918 81.936 1.00 -0.23 \ ATOM 124 CB LEU D 17 -33.680 -6.132 78.861 1.00 -0.23 \ ATOM 125 CG LEU D 17 -35.197 -5.974 78.720 1.00 -0.23 \ ATOM 126 CD1 LEU D 17 -35.698 -4.621 79.230 1.00 -0.23 \ ATOM 127 CD2 LEU D 17 -35.621 -6.196 77.277 1.00 -0.23 \ ATOM 128 N VAL D 18 -33.590 -8.466 80.789 1.00 0.24 \ ATOM 129 CA VAL D 18 -34.331 -9.573 81.358 1.00 0.24 \ ATOM 130 C VAL D 18 -34.091 -9.685 82.851 1.00 0.24 \ ATOM 131 O VAL D 18 -35.018 -9.986 83.608 1.00 0.24 \ ATOM 132 CB VAL D 18 -33.935 -10.886 80.658 1.00 0.24 \ ATOM 133 CG1 VAL D 18 -34.422 -12.108 81.454 1.00 0.24 \ ATOM 134 CG2 VAL D 18 -34.486 -10.901 79.229 1.00 0.24 \ ATOM 135 N CYS D 19 -32.861 -9.466 83.294 1.00 1.71 \ ATOM 136 CA CYS D 19 -32.512 -9.738 84.690 1.00 1.71 \ ATOM 137 C CYS D 19 -32.948 -8.637 85.653 1.00 1.71 \ ATOM 138 O CYS D 19 -33.111 -8.896 86.855 1.00 1.71 \ ATOM 139 CB CYS D 19 -31.022 -10.010 84.821 1.00 1.71 \ ATOM 140 SG CYS D 19 -30.539 -11.445 83.850 1.00 1.71 \ ATOM 141 N GLY D 20 -33.140 -7.422 85.148 1.00 -0.18 \ ATOM 142 CA GLY D 20 -33.578 -6.320 85.992 1.00 -0.18 \ ATOM 143 C GLY D 20 -32.708 -6.182 87.216 1.00 -0.18 \ ATOM 144 O GLY D 20 -31.495 -6.299 87.139 1.00 -0.18 \ ATOM 145 N GLU D 21 -33.342 -5.974 88.367 1.00 0.19 \ ATOM 146 CA GLU D 21 -32.611 -5.735 89.611 1.00 0.19 \ ATOM 147 C GLU D 21 -31.825 -6.942 90.132 1.00 0.19 \ ATOM 148 O GLU D 21 -31.008 -6.801 91.035 1.00 0.19 \ ATOM 149 CB GLU D 21 -33.541 -5.164 90.690 1.00 0.19 \ ATOM 150 CG GLU D 21 -34.020 -3.752 90.352 1.00 0.19 \ ATOM 151 CD GLU D 21 -34.825 -3.092 91.455 1.00 0.19 \ ATOM 152 OE1 GLU D 21 -35.400 -2.012 91.199 1.00 0.19 \ ATOM 153 OE2 GLU D 21 -34.882 -3.638 92.574 1.00 0.19 \ ATOM 154 N ARG D 22 -32.033 -8.116 89.542 1.00 -0.63 \ ATOM 155 CA ARG D 22 -31.212 -9.275 89.899 1.00 -0.63 \ ATOM 156 C ARG D 22 -29.772 -9.116 89.422 1.00 -0.63 \ ATOM 157 O ARG D 22 -28.841 -9.625 90.045 1.00 -0.63 \ ATOM 158 CB ARG D 22 -31.790 -10.555 89.302 1.00 -0.63 \ ATOM 159 CG ARG D 22 -33.136 -10.930 89.868 1.00 -0.63 \ ATOM 160 CD ARG D 22 -33.732 -12.095 89.113 1.00 -0.63 \ ATOM 161 NE ARG D 22 -32.890 -13.284 89.200 1.00 -0.63 \ ATOM 162 CZ ARG D 22 -33.154 -14.430 88.580 1.00 -0.63 \ ATOM 163 NH1 ARG D 22 -34.234 -14.539 87.817 1.00 -0.63 \ ATOM 164 NH2 ARG D 22 -32.332 -15.460 88.709 1.00 -0.63 \ ATOM 165 N GLY D 23 -29.588 -8.422 88.305 1.00 1.71 \ ATOM 166 CA GLY D 23 -28.274 -8.328 87.699 1.00 1.71 \ ATOM 167 C GLY D 23 -27.794 -9.654 87.136 1.00 1.71 \ ATOM 168 O GLY D 23 -28.546 -10.633 87.075 1.00 1.71 \ ATOM 169 N PHE D 24 -26.528 -9.694 86.741 1.00 1.12 \ ATOM 170 CA PHE D 24 -25.973 -10.876 86.109 1.00 1.12 \ ATOM 171 C PHE D 24 -24.451 -10.805 86.082 1.00 1.12 \ ATOM 172 O PHE D 24 -23.866 -9.726 86.169 1.00 1.12 \ ATOM 173 CB PHE D 24 -26.523 -11.009 84.671 1.00 1.12 \ ATOM 174 CG PHE D 24 -26.108 -9.875 83.754 1.00 1.12 \ ATOM 175 CD1 PHE D 24 -26.829 -8.683 83.712 1.00 1.12 \ ATOM 176 CD2 PHE D 24 -24.987 -9.995 82.947 1.00 1.12 \ ATOM 177 CE1 PHE D 24 -26.438 -7.642 82.882 1.00 1.12 \ ATOM 178 CE2 PHE D 24 -24.591 -8.956 82.123 1.00 1.12 \ ATOM 179 CZ PHE D 24 -25.326 -7.776 82.093 1.00 1.12 \ ATOM 180 N PHE D 25 -23.820 -11.970 85.973 0.55 0.52 \ ATOM 181 CA PHE D 25 -22.406 -12.056 85.646 0.55 0.52 \ ATOM 182 C PHE D 25 -22.299 -12.318 84.155 0.55 0.52 \ ATOM 183 O PHE D 25 -23.187 -12.923 83.562 0.55 0.52 \ ATOM 184 CB PHE D 25 -21.740 -13.207 86.405 0.55 0.52 \ ATOM 185 CG PHE D 25 -21.482 -12.913 87.850 0.55 0.52 \ ATOM 186 CD1 PHE D 25 -22.464 -13.128 88.802 0.55 0.52 \ ATOM 187 CD2 PHE D 25 -20.253 -12.425 88.259 0.55 0.52 \ ATOM 188 CE1 PHE D 25 -22.221 -12.862 90.137 0.55 0.52 \ ATOM 189 CE2 PHE D 25 -20.006 -12.163 89.590 0.55 0.52 \ ATOM 190 CZ PHE D 25 -20.990 -12.375 90.527 0.55 0.52 \ ATOM 191 N TYR D 26 -21.221 -11.853 83.541 1.00 -0.25 \ ATOM 192 CA TYR D 26 -20.913 -12.283 82.189 1.00 -0.25 \ ATOM 193 C TYR D 26 -19.424 -12.459 81.962 1.00 -0.25 \ ATOM 194 O TYR D 26 -18.614 -11.685 82.461 1.00 -0.25 \ ATOM 195 CB TYR D 26 -21.501 -11.328 81.145 1.00 -0.25 \ ATOM 196 CG TYR D 26 -21.394 -11.871 79.741 1.00 -0.25 \ ATOM 197 CD1 TYR D 26 -20.264 -11.630 78.963 1.00 -0.25 \ ATOM 198 CD2 TYR D 26 -22.403 -12.665 79.203 1.00 -0.25 \ ATOM 199 CE1 TYR D 26 -20.151 -12.154 77.678 1.00 -0.25 \ ATOM 200 CE2 TYR D 26 -22.303 -13.188 77.921 1.00 -0.25 \ ATOM 201 CZ TYR D 26 -21.176 -12.932 77.167 1.00 -0.25 \ ATOM 202 OH TYR D 26 -21.091 -13.452 75.898 1.00 -0.25 \ ATOM 203 N THR D 27 -19.077 -13.491 81.202 1.00 -0.98 \ ATOM 204 CA THR D 27 -17.712 -13.669 80.731 1.00 -0.98 \ ATOM 205 C THR D 27 -17.719 -14.262 79.323 1.00 -0.98 \ ATOM 206 O THR D 27 -18.508 -15.160 79.031 1.00 -0.98 \ ATOM 207 CB THR D 27 -16.905 -14.580 81.667 1.00 -0.98 \ ATOM 208 OG1 THR D 27 -15.590 -14.755 81.130 1.00 -0.98 \ ATOM 209 CG2 THR D 27 -17.583 -15.938 81.813 1.00 -0.98 \ """, "e5uqaD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5uqaD1_csv", state=0, origin=1) cmd.zoom("e5uqaD1_csv", animate=-1)