cmd.read_pdbstr("""\ ATOM 1 N PHE B 1 -8.635 50.139 20.958 1.00 -1.00 \ ATOM 2 CA PHE B 1 -9.356 50.312 19.645 1.00 -1.00 \ ATOM 3 C PHE B 1 -8.410 50.333 18.456 1.00 -1.00 \ ATOM 4 O PHE B 1 -8.771 49.886 17.368 1.00 -1.00 \ ATOM 5 CB PHE B 1 -10.239 51.577 19.652 1.00 -1.00 \ ATOM 6 N VAL B 2 -7.205 50.852 18.657 1.00 -1.00 \ ATOM 7 CA VAL B 2 -6.199 50.870 17.613 1.00 -1.00 \ ATOM 8 C VAL B 2 -5.619 49.498 17.244 1.00 -1.00 \ ATOM 9 O VAL B 2 -5.601 49.184 16.078 1.00 -1.00 \ ATOM 10 CB VAL B 2 -5.080 51.859 17.938 1.00 -1.00 \ ATOM 11 CG1 VAL B 2 -3.933 51.729 16.934 1.00 -1.00 \ ATOM 12 CG2 VAL B 2 -5.635 53.277 17.923 1.00 -1.00 \ ATOM 13 N ASN B 3 -5.137 48.715 18.219 1.00 -0.47 \ ATOM 14 CA ASN B 3 -4.712 47.326 17.977 1.00 -0.47 \ ATOM 15 C ASN B 3 -5.827 46.597 17.167 1.00 -0.47 \ ATOM 16 O ASN B 3 -5.489 45.934 16.218 1.00 -0.47 \ ATOM 17 CB ASN B 3 -4.373 46.568 19.281 1.00 -0.47 \ ATOM 18 N GLN B 4 -7.130 46.775 17.478 1.00 0.23 \ ATOM 19 CA GLN B 4 -8.206 46.076 16.711 1.00 0.23 \ ATOM 20 C GLN B 4 -8.315 46.596 15.282 1.00 0.23 \ ATOM 21 O GLN B 4 -8.700 45.875 14.331 1.00 0.23 \ ATOM 22 CB GLN B 4 -9.557 46.208 17.377 1.00 0.23 \ ATOM 23 N HIS B 5 -8.007 47.882 15.118 1.00 -0.04 \ ATOM 24 CA HIS B 5 -8.066 48.497 13.792 1.00 -0.04 \ ATOM 25 C HIS B 5 -6.983 47.900 12.886 1.00 -0.04 \ ATOM 26 O HIS B 5 -7.238 47.553 11.758 1.00 -0.04 \ ATOM 27 CB HIS B 5 -7.982 50.044 13.859 1.00 -0.04 \ ATOM 28 CG HIS B 5 -8.325 50.701 12.561 1.00 -0.04 \ ATOM 29 ND1 HIS B 5 -7.421 50.910 11.556 1.00 -0.04 \ ATOM 30 CD2 HIS B 5 -9.491 51.164 12.076 1.00 -0.04 \ ATOM 31 CE1 HIS B 5 -8.011 51.443 10.502 1.00 -0.04 \ ATOM 32 NE2 HIS B 5 -9.271 51.621 10.800 1.00 -0.04 \ ATOM 33 N LEU B 6 -5.798 47.723 13.426 1.00 1.14 \ ATOM 34 CA LEU B 6 -4.653 47.188 12.694 1.00 1.14 \ ATOM 35 C LEU B 6 -4.832 45.654 12.385 1.00 1.14 \ ATOM 36 O LEU B 6 -4.622 45.193 11.255 1.00 1.14 \ ATOM 37 CB LEU B 6 -3.382 47.410 13.471 1.00 1.14 \ ATOM 38 CG LEU B 6 -2.951 48.852 13.807 1.00 1.14 \ ATOM 39 CD1 LEU B 6 -1.665 48.927 14.634 1.00 1.14 \ ATOM 40 CD2 LEU B 6 -2.844 49.812 12.623 1.00 1.14 \ ATOM 41 N CYS B 7 -5.241 44.899 13.384 1.00 1.71 \ ATOM 42 CA CYS B 7 -5.518 43.495 13.185 1.00 1.71 \ ATOM 43 C CYS B 7 -6.574 43.236 12.083 1.00 1.71 \ ATOM 44 O CYS B 7 -6.383 42.368 11.203 1.00 1.71 \ ATOM 45 CB CYS B 7 -5.952 42.861 14.501 1.00 1.71 \ ATOM 46 SG CYS B 7 -6.522 41.152 14.361 1.00 1.71 \ ATOM 47 N GLY B 8 -7.638 44.055 12.080 1.00 0.69 \ ATOM 48 CA GLY B 8 -8.702 43.935 11.113 1.00 0.69 \ ATOM 49 C GLY B 8 -8.246 44.073 9.708 1.00 0.69 \ ATOM 50 O GLY B 8 -8.749 43.376 8.797 1.00 0.69 \ ATOM 51 N SER B 9 -7.307 44.990 9.500 1.00 -0.48 \ ATOM 52 CA SER B 9 -6.702 45.172 8.171 1.00 -0.48 \ ATOM 53 C SER B 9 -5.953 43.913 7.644 1.00 -0.48 \ ATOM 54 O SER B 9 -5.984 43.617 6.479 1.00 -0.48 \ ATOM 55 CB SER B 9 -5.685 46.342 8.173 1.00 -0.48 \ ATOM 56 OG SER B 9 -5.067 46.389 6.884 1.00 -0.48 \ ATOM 57 N HIS B 10 -5.271 43.216 8.496 1.00 -0.23 \ ATOM 58 CA HIS B 10 -4.593 41.984 8.087 1.00 -0.23 \ ATOM 59 C HIS B 10 -5.648 40.878 7.952 1.00 -0.23 \ ATOM 60 O HIS B 10 -5.487 40.003 7.143 1.00 -0.23 \ ATOM 61 CB HIS B 10 -3.543 41.577 9.129 1.00 -0.23 \ ATOM 62 CG HIS B 10 -2.360 42.481 9.187 1.00 -0.23 \ ATOM 63 ND1 HIS B 10 -1.292 42.346 8.338 1.00 -0.23 \ ATOM 64 CD2 HIS B 10 -2.088 43.549 9.962 1.00 -0.23 \ ATOM 65 CE1 HIS B 10 -0.372 43.242 8.650 1.00 -0.23 \ ATOM 66 NE2 HIS B 10 -0.847 43.988 9.634 1.00 -0.23 \ ATOM 67 N LEU B 11 -6.757 40.940 8.701 1.00 1.71 \ ATOM 68 CA LEU B 11 -7.812 39.891 8.521 1.00 1.71 \ ATOM 69 C LEU B 11 -8.391 39.871 7.116 1.00 1.71 \ ATOM 70 O LEU B 11 -8.525 38.844 6.468 1.00 1.71 \ ATOM 71 CB LEU B 11 -8.982 40.056 9.493 1.00 1.71 \ ATOM 72 CG LEU B 11 -8.713 39.468 10.865 1.00 1.71 \ ATOM 73 CD1 LEU B 11 -9.853 39.949 11.769 1.00 1.71 \ ATOM 74 CD2 LEU B 11 -8.628 37.914 10.820 1.00 1.71 \ ATOM 75 N VAL B 12 -8.764 41.035 6.669 1.00 0.69 \ ATOM 76 CA VAL B 12 -9.289 41.227 5.351 1.00 0.69 \ ATOM 77 C VAL B 12 -8.309 40.807 4.246 1.00 0.69 \ ATOM 78 O VAL B 12 -8.757 40.277 3.249 1.00 0.69 \ ATOM 79 CB VAL B 12 -9.683 42.694 5.229 1.00 0.69 \ ATOM 80 CG1 VAL B 12 -9.979 43.037 3.844 1.00 0.69 \ ATOM 81 CG2 VAL B 12 -10.957 43.033 6.003 1.00 0.69 \ ATOM 82 N GLU B 13 -7.013 41.094 4.344 1.00 0.66 \ ATOM 83 CA GLU B 13 -6.079 40.606 3.333 1.00 0.66 \ ATOM 84 C GLU B 13 -6.065 39.019 3.318 1.00 0.66 \ ATOM 85 O GLU B 13 -6.022 38.406 2.282 1.00 0.66 \ ATOM 86 CB GLU B 13 -4.617 41.054 3.564 1.00 0.66 \ ATOM 87 N ALA B 14 -6.048 38.419 4.486 1.00 -0.03 \ ATOM 88 CA ALA B 14 -6.121 36.989 4.650 1.00 -0.03 \ ATOM 89 C ALA B 14 -7.383 36.393 4.066 1.00 -0.03 \ ATOM 90 O ALA B 14 -7.294 35.396 3.402 1.00 -0.03 \ ATOM 91 CB ALA B 14 -6.021 36.651 6.129 1.00 -0.03 \ ATOM 92 N LEU B 15 -8.541 37.014 4.296 1.00 1.71 \ ATOM 93 CA LEU B 15 -9.844 36.530 3.759 1.00 1.71 \ ATOM 94 C LEU B 15 -9.921 36.622 2.253 1.00 1.71 \ ATOM 95 O LEU B 15 -10.397 35.701 1.543 1.00 1.71 \ ATOM 96 CB LEU B 15 -10.989 37.375 4.311 1.00 1.71 \ ATOM 97 CG LEU B 15 -11.333 37.080 5.790 1.00 1.71 \ ATOM 98 CD1 LEU B 15 -12.426 38.018 6.229 1.00 1.71 \ ATOM 99 CD2 LEU B 15 -11.730 35.657 6.108 1.00 1.71 \ ATOM 100 N TYR B 16 -9.453 37.744 1.739 1.00 -0.22 \ ATOM 101 CA TYR B 16 -9.404 37.940 0.295 1.00 -0.22 \ ATOM 102 C TYR B 16 -8.690 36.715 -0.329 1.00 -0.22 \ ATOM 103 O TYR B 16 -9.152 36.115 -1.288 1.00 -0.22 \ ATOM 104 CB TYR B 16 -8.625 39.212 -0.042 1.00 -0.22 \ ATOM 105 CG TYR B 16 -8.478 39.434 -1.550 1.00 -0.22 \ ATOM 106 CD1 TYR B 16 -9.566 39.815 -2.343 1.00 -0.22 \ ATOM 107 CD2 TYR B 16 -7.260 39.295 -2.179 1.00 -0.22 \ ATOM 108 CE1 TYR B 16 -9.406 40.059 -3.711 1.00 -0.22 \ ATOM 109 CE2 TYR B 16 -7.105 39.533 -3.537 1.00 -0.22 \ ATOM 110 CZ TYR B 16 -8.211 39.907 -4.294 1.00 -0.22 \ ATOM 111 OH TYR B 16 -8.068 40.141 -5.640 1.00 -0.22 \ ATOM 112 N LEU B 17 -7.603 36.320 0.307 1.00 -0.23 \ ATOM 113 CA LEU B 17 -6.771 35.264 -0.196 1.00 -0.23 \ ATOM 114 C LEU B 17 -7.338 33.833 -0.033 1.00 -0.23 \ ATOM 115 O LEU B 17 -7.332 33.029 -0.964 1.00 -0.23 \ ATOM 116 CB LEU B 17 -5.451 35.330 0.549 1.00 -0.23 \ ATOM 117 CG LEU B 17 -4.280 35.168 -0.379 1.00 -0.23 \ ATOM 118 CD1 LEU B 17 -3.250 36.302 -0.088 1.00 -0.23 \ ATOM 119 CD2 LEU B 17 -3.795 33.759 -0.185 1.00 -0.23 \ ATOM 120 N VAL B 18 -7.775 33.545 1.181 1.00 0.24 \ ATOM 121 CA VAL B 18 -8.416 32.294 1.510 1.00 0.24 \ ATOM 122 C VAL B 18 -9.701 32.006 0.688 1.00 0.24 \ ATOM 123 O VAL B 18 -9.921 30.905 0.240 1.00 0.24 \ ATOM 124 CB VAL B 18 -8.743 32.264 3.031 1.00 0.24 \ ATOM 125 CG1 VAL B 18 -9.671 31.124 3.390 1.00 0.24 \ ATOM 126 CG2 VAL B 18 -7.441 32.151 3.800 1.00 0.24 \ ATOM 127 N CYS B 19 -10.549 32.996 0.511 1.00 1.71 \ ATOM 128 CA CYS B 19 -11.874 32.749 -0.042 1.00 1.71 \ ATOM 129 C CYS B 19 -11.948 32.745 -1.566 1.00 1.71 \ ATOM 130 O CYS B 19 -12.944 32.274 -2.122 1.00 1.71 \ ATOM 131 CB CYS B 19 -12.840 33.789 0.494 1.00 1.71 \ ATOM 132 SG CYS B 19 -12.963 33.771 2.276 1.00 1.71 \ ATOM 133 N GLY B 20 -10.927 33.259 -2.249 1.00 -0.18 \ ATOM 134 CA GLY B 20 -10.946 33.344 -3.728 1.00 -0.18 \ ATOM 135 C GLY B 20 -12.284 33.791 -4.335 1.00 -0.18 \ ATOM 136 O GLY B 20 -12.893 34.785 -3.878 1.00 -0.18 \ ATOM 137 N GLU B 21 -12.761 33.028 -5.336 1.00 0.19 \ ATOM 138 CA GLU B 21 -13.947 33.358 -6.129 1.00 0.19 \ ATOM 139 C GLU B 21 -15.193 33.541 -5.271 1.00 0.19 \ ATOM 140 O GLU B 21 -15.997 34.395 -5.557 1.00 0.19 \ ATOM 141 CB GLU B 21 -14.161 32.275 -7.199 1.00 0.19 \ ATOM 142 N ARG B 22 -15.290 32.788 -4.176 1.00 -0.63 \ ATOM 143 CA ARG B 22 -16.421 32.891 -3.224 1.00 -0.63 \ ATOM 144 C ARG B 22 -16.489 34.276 -2.600 1.00 -0.63 \ ATOM 145 O ARG B 22 -17.549 34.772 -2.321 1.00 -0.63 \ ATOM 146 CB ARG B 22 -16.297 31.861 -2.082 1.00 -0.63 \ ATOM 147 CG ARG B 22 -16.390 30.388 -2.480 1.00 -0.63 \ ATOM 148 CD ARG B 22 -16.030 29.486 -1.306 1.00 -0.63 \ ATOM 149 NE ARG B 22 -14.590 29.481 -1.029 1.00 -0.63 \ ATOM 150 CZ ARG B 22 -14.018 28.858 0.010 1.00 -0.63 \ ATOM 151 NH1 ARG B 22 -14.757 28.155 0.889 1.00 -0.63 \ ATOM 152 NH2 ARG B 22 -12.694 28.943 0.173 1.00 -0.63 \ ATOM 153 N GLY B 23 -15.346 34.886 -2.312 1.00 1.71 \ ATOM 154 CA GLY B 23 -15.349 36.213 -1.719 1.00 1.71 \ ATOM 155 C GLY B 23 -15.766 36.082 -0.283 1.00 1.71 \ ATOM 156 O GLY B 23 -15.761 34.951 0.238 1.00 1.71 \ ATOM 157 N PHE B 24 -16.125 37.215 0.353 1.00 1.12 \ ATOM 158 CA PHE B 24 -16.267 37.247 1.806 1.00 1.12 \ ATOM 159 C PHE B 24 -17.007 38.416 2.325 1.00 1.12 \ ATOM 160 O PHE B 24 -17.347 39.302 1.611 1.00 1.12 \ ATOM 161 CB PHE B 24 -14.862 37.169 2.463 1.00 1.12 \ ATOM 162 CG PHE B 24 -14.058 38.427 2.338 1.00 1.12 \ ATOM 163 CD1 PHE B 24 -14.133 39.373 3.209 1.00 1.12 \ ATOM 164 CD2 PHE B 24 -13.244 38.627 1.321 1.00 1.12 \ ATOM 165 CE1 PHE B 24 -13.394 40.548 3.088 1.00 1.12 \ ATOM 166 CE2 PHE B 24 -12.488 39.785 1.158 1.00 1.12 \ ATOM 167 CZ PHE B 24 -12.533 40.762 2.051 1.00 1.12 \ ATOM 168 N PHE B 25 -17.255 38.435 3.595 1.00 0.52 \ ATOM 169 CA PHE B 25 -17.769 39.659 4.187 1.00 0.52 \ ATOM 170 C PHE B 25 -17.107 39.861 5.544 1.00 0.52 \ ATOM 171 O PHE B 25 -16.603 38.899 6.197 1.00 0.52 \ ATOM 172 CB PHE B 25 -19.223 39.597 4.388 1.00 0.52 \ ATOM 173 CG PHE B 25 -19.585 38.399 5.041 1.00 0.52 \ ATOM 174 CD1 PHE B 25 -19.532 37.209 4.346 1.00 0.52 \ ATOM 175 CD2 PHE B 25 -19.786 38.407 6.323 1.00 0.52 \ ATOM 176 CE1 PHE B 25 -19.785 36.049 4.919 1.00 0.52 \ ATOM 177 CE2 PHE B 25 -20.061 37.245 6.924 1.00 0.52 \ ATOM 178 CZ PHE B 25 -20.080 36.063 6.222 1.00 0.52 \ ATOM 179 N TYR B 26 -17.118 41.138 5.925 1.00 -0.25 \ ATOM 180 CA TYR B 26 -16.364 41.608 7.035 1.00 -0.25 \ ATOM 181 C TYR B 26 -17.264 42.531 7.726 1.00 -0.25 \ ATOM 182 O TYR B 26 -17.639 43.517 7.146 1.00 -0.25 \ ATOM 183 CB TYR B 26 -15.100 42.366 6.602 1.00 -0.25 \ ATOM 184 CG TYR B 26 -14.388 42.892 7.825 1.00 -0.25 \ ATOM 185 CD1 TYR B 26 -13.729 42.012 8.684 1.00 -0.25 \ ATOM 186 CD2 TYR B 26 -14.485 44.214 8.215 1.00 -0.25 \ ATOM 187 CE1 TYR B 26 -13.109 42.455 9.852 1.00 -0.25 \ ATOM 188 CE2 TYR B 26 -13.896 44.660 9.393 1.00 -0.25 \ ATOM 189 CZ TYR B 26 -13.204 43.775 10.212 1.00 -0.25 \ ATOM 190 OH TYR B 26 -12.566 44.186 11.389 1.00 -0.25 \ ATOM 191 N THR B 27 -17.538 42.235 8.984 1.00 -0.98 \ ATOM 192 CA THR B 27 -18.428 42.985 9.820 1.00 -0.98 \ ATOM 193 C THR B 27 -17.725 43.197 11.143 1.00 -0.98 \ ATOM 194 O THR B 27 -17.699 42.276 11.954 1.00 -0.98 \ ATOM 195 CB THR B 27 -19.715 42.157 10.067 1.00 -0.98 \ ATOM 196 OG1 THR B 27 -19.959 41.291 8.942 1.00 -0.98 \ ATOM 197 CG2 THR B 27 -20.905 43.067 10.267 1.00 -0.98 \ """, "e5uruB1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5uruB1_csv", state=0, origin=1) cmd.zoom("e5uruB1_csv", animate=-1)