cmd.read_pdbstr("""\ ATOM 1 N VAL D 2 -4.526 38.165 -13.114 1.00 -1.00 \ ATOM 2 CA VAL D 2 -3.419 38.621 -12.202 1.00 -1.00 \ ATOM 3 C VAL D 2 -3.454 40.136 -11.878 1.00 -1.00 \ ATOM 4 O VAL D 2 -3.511 40.491 -10.728 1.00 -1.00 \ ATOM 5 CB VAL D 2 -2.015 38.193 -12.688 1.00 -1.00 \ ATOM 6 CG1 VAL D 2 -0.932 38.896 -11.855 1.00 -1.00 \ ATOM 7 CG2 VAL D 2 -1.874 36.672 -12.610 1.00 -1.00 \ ATOM 8 N ASN D 3 -3.412 40.999 -12.891 1.00 -0.47 \ ATOM 9 CA ASN D 3 -3.757 42.421 -12.736 1.00 -0.47 \ ATOM 10 C ASN D 3 -5.060 42.574 -11.930 1.00 -0.47 \ ATOM 11 O ASN D 3 -5.108 43.373 -11.007 1.00 -0.47 \ ATOM 12 CB ASN D 3 -3.870 43.164 -14.112 1.00 -0.47 \ ATOM 13 CG ASN D 3 -2.653 44.049 -14.431 1.00 -0.47 \ ATOM 14 OD1 ASN D 3 -1.943 44.507 -13.530 1.00 -0.47 \ ATOM 15 ND2 ASN D 3 -2.410 44.295 -15.731 1.00 -0.47 \ ATOM 16 N GLN D 4 -6.095 41.803 -12.251 1.00 0.23 \ ATOM 17 CA GLN D 4 -7.363 41.892 -11.499 1.00 0.23 \ ATOM 18 C GLN D 4 -7.192 41.493 -10.041 1.00 0.23 \ ATOM 19 O GLN D 4 -7.712 42.158 -9.155 1.00 0.23 \ ATOM 20 CB GLN D 4 -8.436 41.017 -12.153 1.00 0.23 \ ATOM 21 N HIS D 5 -6.438 40.412 -9.820 1.00 -0.04 \ ATOM 22 CA HIS D 5 -6.268 39.797 -8.531 1.00 -0.04 \ ATOM 23 C HIS D 5 -5.430 40.698 -7.585 1.00 -0.04 \ ATOM 24 O HIS D 5 -5.716 40.760 -6.390 1.00 -0.04 \ ATOM 25 CB HIS D 5 -5.654 38.375 -8.706 1.00 -0.04 \ ATOM 26 CG HIS D 5 -5.350 37.693 -7.412 1.00 -0.04 \ ATOM 27 ND1 HIS D 5 -6.331 37.178 -6.606 1.00 -0.04 \ ATOM 28 CD2 HIS D 5 -4.186 37.516 -6.744 1.00 -0.04 \ ATOM 29 CE1 HIS D 5 -5.787 36.700 -5.497 1.00 -0.04 \ ATOM 30 NE2 HIS D 5 -4.486 36.901 -5.552 1.00 -0.04 \ ATOM 31 N LEU D 6 -4.431 41.391 -8.126 1.00 1.14 \ ATOM 32 CA LEU D 6 -3.636 42.364 -7.369 1.00 1.14 \ ATOM 33 C LEU D 6 -4.429 43.617 -7.023 1.00 1.14 \ ATOM 34 O LEU D 6 -4.406 44.065 -5.879 1.00 1.14 \ ATOM 35 CB LEU D 6 -2.386 42.786 -8.137 1.00 1.14 \ ATOM 36 CG LEU D 6 -1.353 41.734 -8.551 1.00 1.14 \ ATOM 37 CD1 LEU D 6 -0.106 42.329 -9.198 1.00 1.14 \ ATOM 38 CD2 LEU D 6 -0.941 40.855 -7.400 1.00 1.14 \ ATOM 39 N CYS D 7 -5.091 44.190 -8.016 1.00 1.71 \ ATOM 40 CA CYS D 7 -6.020 45.303 -7.802 1.00 1.71 \ ATOM 41 C CYS D 7 -7.105 44.989 -6.745 1.00 1.71 \ ATOM 42 O CYS D 7 -7.339 45.802 -5.853 1.00 1.71 \ ATOM 43 CB CYS D 7 -6.618 45.781 -9.159 1.00 1.71 \ ATOM 44 SG CYS D 7 -7.822 47.099 -8.939 1.00 1.71 \ ATOM 45 N GLY D 8 -7.713 43.799 -6.782 1.00 0.69 \ ATOM 46 CA GLY D 8 -8.719 43.399 -5.745 1.00 0.69 \ ATOM 47 C GLY D 8 -8.180 43.464 -4.319 1.00 0.69 \ ATOM 48 O GLY D 8 -8.844 43.858 -3.371 1.00 0.69 \ ATOM 49 N SER D 9 -6.933 43.116 -4.147 1.00 -0.48 \ ATOM 50 CA SER D 9 -6.302 43.194 -2.816 1.00 -0.48 \ ATOM 51 C SER D 9 -6.236 44.617 -2.251 1.00 -0.48 \ ATOM 52 O SER D 9 -6.396 44.825 -1.024 1.00 -0.48 \ ATOM 53 CB SER D 9 -4.873 42.652 -2.910 1.00 -0.48 \ ATOM 54 OG SER D 9 -4.265 42.793 -1.670 1.00 -0.48 \ ATOM 55 N HIS D 10 -5.938 45.588 -3.133 1.00 -0.23 \ ATOM 56 CA HIS D 10 -5.990 47.019 -2.747 1.00 -0.23 \ ATOM 57 C HIS D 10 -7.437 47.480 -2.485 1.00 -0.23 \ ATOM 58 O HIS D 10 -7.690 48.212 -1.535 1.00 -0.23 \ ATOM 59 CB HIS D 10 -5.271 47.859 -3.813 1.00 -0.23 \ ATOM 60 CG HIS D 10 -3.798 47.615 -3.834 1.00 -0.23 \ ATOM 61 ND1 HIS D 10 -2.926 48.261 -2.988 1.00 -0.23 \ ATOM 62 CD2 HIS D 10 -3.057 46.706 -4.499 1.00 -0.23 \ ATOM 63 CE1 HIS D 10 -1.708 47.814 -3.188 1.00 -0.23 \ ATOM 64 NE2 HIS D 10 -1.754 46.885 -4.116 1.00 -0.23 \ ATOM 65 N LEU D 11 -8.377 47.008 -3.281 1.00 1.71 \ ATOM 66 CA LEU D 11 -9.782 47.399 -3.101 1.00 1.71 \ ATOM 67 C LEU D 11 -10.302 47.052 -1.735 1.00 1.71 \ ATOM 68 O LEU D 11 -10.869 47.917 -1.032 1.00 1.71 \ ATOM 69 CB LEU D 11 -10.658 46.733 -4.151 1.00 1.71 \ ATOM 70 CG LEU D 11 -10.522 47.271 -5.544 1.00 1.71 \ ATOM 71 CD1 LEU D 11 -11.348 46.324 -6.408 1.00 1.71 \ ATOM 72 CD2 LEU D 11 -11.083 48.688 -5.581 1.00 1.71 \ ATOM 73 N VAL D 12 -10.094 45.802 -1.335 1.00 0.69 \ ATOM 74 CA VAL D 12 -10.542 45.402 -0.013 1.00 0.69 \ ATOM 75 C VAL D 12 -9.836 46.159 1.083 1.00 0.69 \ ATOM 76 O VAL D 12 -10.491 46.415 2.102 1.00 0.69 \ ATOM 77 CB VAL D 12 -10.566 43.859 0.251 1.00 0.69 \ ATOM 78 CG1 VAL D 12 -11.480 43.201 -0.749 1.00 0.69 \ ATOM 79 CG2 VAL D 12 -9.244 43.132 0.191 1.00 0.69 \ ATOM 80 N GLU D 13 -8.558 46.548 0.910 1.00 0.66 \ ATOM 81 CA GLU D 13 -7.931 47.396 1.958 1.00 0.66 \ ATOM 82 C GLU D 13 -8.643 48.760 2.087 1.00 0.66 \ ATOM 83 O GLU D 13 -8.869 49.245 3.197 1.00 0.66 \ ATOM 84 CB GLU D 13 -6.378 47.567 1.774 1.00 0.66 \ ATOM 85 CG GLU D 13 -5.727 48.732 2.540 1.00 0.66 \ ATOM 86 CD GLU D 13 -5.747 48.587 4.052 1.00 0.66 \ ATOM 87 OE1 GLU D 13 -5.111 47.585 4.504 1.00 0.66 \ ATOM 88 OE2 GLU D 13 -6.334 49.461 4.810 1.00 0.66 \ ATOM 89 N ALA D 14 -8.920 49.348 0.943 1.00 -0.03 \ ATOM 90 CA ALA D 14 -9.679 50.626 0.801 1.00 -0.03 \ ATOM 91 C ALA D 14 -11.137 50.576 1.322 1.00 -0.03 \ ATOM 92 O ALA D 14 -11.564 51.480 2.038 1.00 -0.03 \ ATOM 93 CB ALA D 14 -9.628 51.063 -0.638 1.00 -0.03 \ ATOM 94 N LEU D 15 -11.881 49.504 1.018 1.00 1.71 \ ATOM 95 CA LEU D 15 -13.204 49.281 1.641 1.00 1.71 \ ATOM 96 C LEU D 15 -13.104 49.133 3.162 1.00 1.71 \ ATOM 97 O LEU D 15 -13.929 49.718 3.929 1.00 1.71 \ ATOM 98 CB LEU D 15 -13.862 48.072 1.052 1.00 1.71 \ ATOM 99 CG LEU D 15 -14.250 48.044 -0.440 1.00 1.71 \ ATOM 100 CD1 LEU D 15 -14.760 46.672 -0.825 1.00 1.71 \ ATOM 101 CD2 LEU D 15 -15.282 49.131 -0.740 1.00 1.71 \ ATOM 102 N TYR D 16 -12.084 48.422 3.617 1.00 -0.22 \ ATOM 103 CA TYR D 16 -11.858 48.294 5.070 1.00 -0.22 \ ATOM 104 C TYR D 16 -11.833 49.654 5.757 1.00 -0.22 \ ATOM 105 O TYR D 16 -12.384 49.875 6.801 1.00 -0.22 \ ATOM 106 CB TYR D 16 -10.566 47.469 5.385 1.00 -0.22 \ ATOM 107 CG TYR D 16 -10.290 47.368 6.856 1.00 -0.22 \ ATOM 108 CD1 TYR D 16 -11.075 46.584 7.694 1.00 -0.22 \ ATOM 109 CD2 TYR D 16 -9.230 48.103 7.436 1.00 -0.22 \ ATOM 110 CE1 TYR D 16 -10.882 46.580 9.094 1.00 -0.22 \ ATOM 111 CE2 TYR D 16 -8.943 48.002 8.803 1.00 -0.22 \ ATOM 112 CZ TYR D 16 -9.814 47.272 9.638 1.00 -0.22 \ ATOM 113 OH TYR D 16 -9.588 47.278 10.990 1.00 -0.22 \ ATOM 114 N LEU D 17 -11.173 50.590 5.129 1.00 -0.23 \ ATOM 115 CA LEU D 17 -10.996 51.930 5.662 1.00 -0.23 \ ATOM 116 C LEU D 17 -12.250 52.814 5.512 1.00 -0.23 \ ATOM 117 O LEU D 17 -12.657 53.461 6.440 1.00 -0.23 \ ATOM 118 CB LEU D 17 -9.915 52.596 4.828 1.00 -0.23 \ ATOM 119 CG LEU D 17 -9.039 53.466 5.624 1.00 -0.23 \ ATOM 120 CD1 LEU D 17 -7.688 52.712 5.660 1.00 -0.23 \ ATOM 121 CD2 LEU D 17 -8.867 54.778 4.899 1.00 -0.23 \ ATOM 122 N VAL D 18 -12.785 52.878 4.301 1.00 0.24 \ ATOM 123 CA VAL D 18 -13.904 53.747 4.021 1.00 0.24 \ ATOM 124 C VAL D 18 -15.182 53.306 4.737 1.00 0.24 \ ATOM 125 O VAL D 18 -15.925 54.172 5.165 1.00 0.24 \ ATOM 126 CB VAL D 18 -14.201 53.793 2.506 1.00 0.24 \ ATOM 127 CG1 VAL D 18 -15.437 54.605 2.241 1.00 0.24 \ ATOM 128 CG2 VAL D 18 -13.005 54.395 1.751 1.00 0.24 \ ATOM 129 N CYS D 19 -15.429 51.982 4.842 1.00 1.71 \ ATOM 130 CA CYS D 19 -16.655 51.499 5.424 1.00 1.71 \ ATOM 131 C CYS D 19 -16.774 51.558 6.941 1.00 1.71 \ ATOM 132 O CYS D 19 -17.874 51.577 7.459 1.00 1.71 \ ATOM 133 CB CYS D 19 -16.976 50.113 4.900 1.00 1.71 \ ATOM 134 SG CYS D 19 -16.995 49.987 3.101 1.00 1.71 \ ATOM 135 N GLY D 20 -15.670 51.561 7.657 1.00 -0.18 \ ATOM 136 CA GLY D 20 -15.715 51.640 9.130 1.00 -0.18 \ ATOM 137 C GLY D 20 -16.544 50.570 9.801 1.00 -0.18 \ ATOM 138 O GLY D 20 -16.455 49.395 9.391 1.00 -0.18 \ ATOM 139 N GLU D 21 -17.360 50.985 10.798 1.00 0.19 \ ATOM 140 CA GLU D 21 -18.198 50.081 11.622 1.00 0.19 \ ATOM 141 C GLU D 21 -19.211 49.322 10.793 1.00 0.19 \ ATOM 142 O GLU D 21 -19.607 48.196 11.125 1.00 0.19 \ ATOM 143 CB GLU D 21 -18.933 50.849 12.749 1.00 0.19 \ ATOM 144 N ARG D 22 -19.597 49.926 9.682 1.00 -0.63 \ ATOM 145 CA ARG D 22 -20.581 49.319 8.792 1.00 -0.63 \ ATOM 146 C ARG D 22 -20.130 48.029 8.140 1.00 -0.63 \ ATOM 147 O ARG D 22 -20.934 47.105 7.998 1.00 -0.63 \ ATOM 148 CB ARG D 22 -20.932 50.295 7.707 1.00 -0.63 \ ATOM 149 CG ARG D 22 -21.630 51.539 8.219 1.00 -0.63 \ ATOM 150 CD ARG D 22 -21.876 52.473 7.044 1.00 -0.63 \ ATOM 151 NE ARG D 22 -20.641 53.099 6.556 1.00 -0.63 \ ATOM 152 CZ ARG D 22 -20.542 53.966 5.531 1.00 -0.63 \ ATOM 153 NH1 ARG D 22 -21.608 54.339 4.832 1.00 -0.63 \ ATOM 154 NH2 ARG D 22 -19.350 54.460 5.192 1.00 -0.63 \ ATOM 155 N GLY D 23 -18.850 47.967 7.763 1.00 1.71 \ ATOM 156 CA GLY D 23 -18.297 46.760 7.160 1.00 1.71 \ ATOM 157 C GLY D 23 -18.764 46.648 5.728 1.00 1.71 \ ATOM 158 O GLY D 23 -19.366 47.604 5.211 1.00 1.71 \ ATOM 159 N PHE D 24 -18.545 45.477 5.105 1.00 1.12 \ ATOM 160 CA PHE D 24 -18.735 45.311 3.663 1.00 1.12 \ ATOM 161 C PHE D 24 -18.755 43.854 3.212 1.00 1.12 \ ATOM 162 O PHE D 24 -18.464 42.943 3.978 1.00 1.12 \ ATOM 163 CB PHE D 24 -17.643 46.058 2.851 1.00 1.12 \ ATOM 164 CG PHE D 24 -16.216 45.526 3.053 1.00 1.12 \ ATOM 165 CD1 PHE D 24 -15.443 45.976 4.048 1.00 1.12 \ ATOM 166 CD2 PHE D 24 -15.678 44.572 2.205 1.00 1.12 \ ATOM 167 CE1 PHE D 24 -14.123 45.469 4.234 1.00 1.12 \ ATOM 168 CE2 PHE D 24 -14.360 44.097 2.335 1.00 1.12 \ ATOM 169 CZ PHE D 24 -13.591 44.518 3.377 1.00 1.12 \ ATOM 170 N PHE D 25 -19.065 43.683 1.929 1.00 0.52 \ ATOM 171 CA PHE D 25 -18.885 42.452 1.225 1.00 0.52 \ ATOM 172 C PHE D 25 -18.060 42.523 0.026 1.00 0.52 \ ATOM 173 O PHE D 25 -18.267 43.411 -0.758 1.00 0.52 \ ATOM 174 CB PHE D 25 -20.050 42.214 0.407 1.00 0.52 \ ATOM 175 CG PHE D 25 -21.146 41.893 1.100 1.00 0.52 \ ATOM 176 CD1 PHE D 25 -21.824 42.882 1.721 1.00 0.52 \ ATOM 177 CD2 PHE D 25 -21.560 40.650 1.053 1.00 0.52 \ ATOM 178 CE1 PHE D 25 -22.950 42.611 2.344 1.00 0.52 \ ATOM 179 CE2 PHE D 25 -22.703 40.339 1.660 1.00 0.52 \ ATOM 180 CZ PHE D 25 -23.411 41.325 2.309 1.00 0.52 \ ATOM 181 N TYR D 26 -17.338 41.472 -0.265 1.00 -0.25 \ ATOM 182 CA TYR D 26 -16.584 41.479 -1.455 1.00 -0.25 \ ATOM 183 C TYR D 26 -16.904 40.240 -2.178 1.00 -0.25 \ ATOM 184 O TYR D 26 -16.735 39.132 -1.644 1.00 -0.25 \ ATOM 185 CB TYR D 26 -15.111 41.530 -1.151 1.00 -0.25 \ ATOM 186 CG TYR D 26 -14.309 41.482 -2.407 1.00 -0.25 \ ATOM 187 CD1 TYR D 26 -14.302 42.580 -3.282 1.00 -0.25 \ ATOM 188 CD2 TYR D 26 -13.559 40.360 -2.745 1.00 -0.25 \ ATOM 189 CE1 TYR D 26 -13.560 42.554 -4.459 1.00 -0.25 \ ATOM 190 CE2 TYR D 26 -12.813 40.333 -3.915 1.00 -0.25 \ ATOM 191 CZ TYR D 26 -12.817 41.434 -4.768 1.00 -0.25 \ ATOM 192 OH TYR D 26 -12.112 41.472 -5.964 1.00 -0.25 \ ATOM 193 N THR D 27 -17.326 40.449 -3.419 1.00 -0.98 \ ATOM 194 CA THR D 27 -17.586 39.399 -4.332 1.00 -0.98 \ ATOM 195 C THR D 27 -16.830 39.695 -5.651 1.00 -0.98 \ ATOM 196 O THR D 27 -17.218 40.601 -6.423 1.00 -0.98 \ ATOM 197 CB THR D 27 -19.122 39.270 -4.602 1.00 -0.98 \ ATOM 198 OG1 THR D 27 -19.880 39.982 -3.607 1.00 -0.98 \ ATOM 199 CG2 THR D 27 -19.544 37.824 -4.553 1.00 -0.98 \ """, "e5uruD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5uruD1_csv", state=0, origin=1) cmd.zoom("e5uruD1_csv", animate=-1)