cmd.read_pdbstr("""\ ATOM 1 N PHE H 1 -4.805 37.258 -55.634 1.00 -1.00 \ ATOM 2 CA PHE H 1 -5.407 36.893 -54.319 1.00 -1.00 \ ATOM 3 C PHE H 1 -4.612 37.449 -53.160 1.00 -1.00 \ ATOM 4 O PHE H 1 -5.197 37.809 -52.152 1.00 -1.00 \ ATOM 5 CB PHE H 1 -5.568 35.362 -54.167 1.00 -1.00 \ ATOM 6 N VAL H 2 -3.293 37.520 -53.293 1.00 -1.00 \ ATOM 7 CA VAL H 2 -2.445 38.132 -52.254 1.00 -1.00 \ ATOM 8 C VAL H 2 -2.746 39.623 -51.904 1.00 -1.00 \ ATOM 9 O VAL H 2 -2.828 39.963 -50.740 1.00 -1.00 \ ATOM 10 CB VAL H 2 -0.958 37.945 -52.603 1.00 -1.00 \ ATOM 11 CG1 VAL H 2 -0.062 38.834 -51.750 1.00 -1.00 \ ATOM 12 CG2 VAL H 2 -0.586 36.481 -52.420 1.00 -1.00 \ ATOM 13 N ASN H 3 -2.920 40.469 -52.910 1.00 -0.47 \ ATOM 14 CA ASN H 3 -3.234 41.881 -52.722 1.00 -0.47 \ ATOM 15 C ASN H 3 -4.479 41.897 -51.838 1.00 -0.47 \ ATOM 16 O ASN H 3 -4.513 42.638 -50.887 1.00 -0.47 \ ATOM 17 CB ASN H 3 -3.462 42.610 -54.081 1.00 -0.47 \ ATOM 18 CG ASN H 3 -2.530 43.832 -54.304 1.00 -0.47 \ ATOM 19 OD1 ASN H 3 -1.914 44.352 -53.362 1.00 -0.47 \ ATOM 20 ND2 ASN H 3 -2.452 44.320 -55.577 1.00 -0.47 \ ATOM 21 N GLN H 4 -5.461 41.025 -52.103 1.00 0.23 \ ATOM 22 CA GLN H 4 -6.713 40.993 -51.331 1.00 0.23 \ ATOM 23 C GLN H 4 -6.539 40.519 -49.919 1.00 0.23 \ ATOM 24 O GLN H 4 -7.202 41.002 -49.007 1.00 0.23 \ ATOM 25 CB GLN H 4 -7.808 40.183 -52.052 1.00 0.23 \ ATOM 26 CG GLN H 4 -8.286 40.897 -53.316 1.00 0.23 \ ATOM 27 CD GLN H 4 -9.257 40.060 -54.112 1.00 0.23 \ ATOM 28 OE1 GLN H 4 -9.756 39.022 -53.630 1.00 0.23 \ ATOM 29 NE2 GLN H 4 -9.514 40.475 -55.336 1.00 0.23 \ ATOM 30 N HIS H 5 -5.658 39.566 -49.731 1.00 -0.04 \ ATOM 31 CA HIS H 5 -5.337 39.067 -48.394 1.00 -0.04 \ ATOM 32 C HIS H 5 -4.639 40.151 -47.528 1.00 -0.04 \ ATOM 33 O HIS H 5 -4.921 40.290 -46.345 1.00 -0.04 \ ATOM 34 CB HIS H 5 -4.490 37.801 -48.562 1.00 -0.04 \ ATOM 35 CG HIS H 5 -4.193 37.082 -47.290 1.00 -0.04 \ ATOM 36 ND1 HIS H 5 -5.142 36.402 -46.572 1.00 -0.04 \ ATOM 37 CD2 HIS H 5 -3.036 36.925 -46.614 1.00 -0.04 \ ATOM 38 CE1 HIS H 5 -4.588 35.873 -45.491 1.00 -0.04 \ ATOM 39 NE2 HIS H 5 -3.314 36.194 -45.480 1.00 -0.04 \ ATOM 40 N LEU H 6 -3.749 40.933 -48.107 1.00 1.14 \ ATOM 41 CA LEU H 6 -3.111 42.009 -47.341 1.00 1.14 \ ATOM 42 C LEU H 6 -4.120 43.117 -47.016 1.00 1.14 \ ATOM 43 O LEU H 6 -4.230 43.507 -45.882 1.00 1.14 \ ATOM 44 CB LEU H 6 -1.916 42.636 -48.051 1.00 1.14 \ ATOM 45 CG LEU H 6 -0.820 41.657 -48.496 1.00 1.14 \ ATOM 46 CD1 LEU H 6 0.308 42.380 -49.157 1.00 1.14 \ ATOM 47 CD2 LEU H 6 -0.269 40.753 -47.407 1.00 1.14 \ ATOM 48 N CYS H 7 -4.829 43.610 -48.007 1.00 1.71 \ ATOM 49 CA CYS H 7 -5.832 44.631 -47.812 1.00 1.71 \ ATOM 50 C CYS H 7 -6.899 44.237 -46.735 1.00 1.71 \ ATOM 51 O CYS H 7 -7.265 45.098 -45.898 1.00 1.71 \ ATOM 52 CB CYS H 7 -6.495 44.977 -49.154 1.00 1.71 \ ATOM 53 SG CYS H 7 -7.855 46.169 -49.026 1.00 1.71 \ ATOM 54 N GLY H 8 -7.327 42.971 -46.716 1.00 0.69 \ ATOM 55 CA GLY H 8 -8.275 42.497 -45.714 1.00 0.69 \ ATOM 56 C GLY H 8 -7.798 42.663 -44.317 1.00 0.69 \ ATOM 57 O GLY H 8 -8.589 43.003 -43.372 1.00 0.69 \ ATOM 58 N SER H 9 -6.488 42.442 -44.126 1.00 -0.48 \ ATOM 59 CA SER H 9 -5.899 42.603 -42.784 1.00 -0.48 \ ATOM 60 C SER H 9 -5.947 44.052 -42.260 1.00 -0.48 \ ATOM 61 O SER H 9 -6.137 44.289 -41.074 1.00 -0.48 \ ATOM 62 CB SER H 9 -4.479 42.076 -42.751 1.00 -0.48 \ ATOM 63 OG SER H 9 -3.776 42.548 -41.569 1.00 -0.48 \ ATOM 64 N HIS H 10 -5.807 45.007 -43.146 1.00 -0.23 \ ATOM 65 CA HIS H 10 -6.052 46.395 -42.781 1.00 -0.23 \ ATOM 66 C HIS H 10 -7.543 46.713 -42.616 1.00 -0.23 \ ATOM 67 O HIS H 10 -7.905 47.547 -41.777 1.00 -0.23 \ ATOM 68 CB HIS H 10 -5.370 47.329 -43.780 1.00 -0.23 \ ATOM 69 CG HIS H 10 -3.884 47.213 -43.798 1.00 -0.23 \ ATOM 70 ND1 HIS H 10 -3.079 47.945 -42.968 1.00 -0.23 \ ATOM 71 CD2 HIS H 10 -3.044 46.475 -44.556 1.00 -0.23 \ ATOM 72 CE1 HIS H 10 -1.803 47.690 -43.228 1.00 -0.23 \ ATOM 73 NE2 HIS H 10 -1.753 46.795 -44.187 1.00 -0.23 \ ATOM 74 N LEU H 11 -8.420 46.054 -43.353 1.00 1.71 \ ATOM 75 CA LEU H 11 -9.855 46.282 -43.147 1.00 1.71 \ ATOM 76 C LEU H 11 -10.326 45.966 -41.743 1.00 1.71 \ ATOM 77 O LEU H 11 -11.004 46.795 -41.051 1.00 1.71 \ ATOM 78 CB LEU H 11 -10.715 45.440 -44.129 1.00 1.71 \ ATOM 79 CG LEU H 11 -10.748 45.990 -45.532 1.00 1.71 \ ATOM 80 CD1 LEU H 11 -11.496 45.002 -46.431 1.00 1.71 \ ATOM 81 CD2 LEU H 11 -11.414 47.370 -45.493 1.00 1.71 \ ATOM 82 N VAL H 12 -10.000 44.776 -41.297 1.00 0.69 \ ATOM 83 CA VAL H 12 -10.441 44.421 -39.952 1.00 0.69 \ ATOM 84 C VAL H 12 -9.846 45.273 -38.846 1.00 0.69 \ ATOM 85 O VAL H 12 -10.561 45.461 -37.826 1.00 0.69 \ ATOM 86 CB VAL H 12 -10.253 42.913 -39.600 1.00 0.69 \ ATOM 87 CG1 VAL H 12 -10.991 42.101 -40.594 1.00 0.69 \ ATOM 88 CG2 VAL H 12 -8.825 42.448 -39.618 1.00 0.69 \ ATOM 89 N GLU H 13 -8.562 45.699 -38.959 1.00 0.66 \ ATOM 90 CA GLU H 13 -8.017 46.626 -37.934 1.00 0.66 \ ATOM 91 C GLU H 13 -8.860 47.984 -37.841 1.00 0.66 \ ATOM 92 O GLU H 13 -9.148 48.510 -36.727 1.00 0.66 \ ATOM 93 CB GLU H 13 -6.532 47.002 -38.156 1.00 0.66 \ ATOM 94 N ALA H 14 -9.121 48.533 -39.014 1.00 -0.03 \ ATOM 95 CA ALA H 14 -10.053 49.643 -39.239 1.00 -0.03 \ ATOM 96 C ALA H 14 -11.478 49.395 -38.722 1.00 -0.03 \ ATOM 97 O ALA H 14 -12.034 50.266 -38.091 1.00 -0.03 \ ATOM 98 CB ALA H 14 -10.089 49.983 -40.695 1.00 -0.03 \ ATOM 99 N LEU H 15 -12.076 48.256 -39.011 1.00 1.71 \ ATOM 100 CA LEU H 15 -13.436 47.925 -38.428 1.00 1.71 \ ATOM 101 C LEU H 15 -13.367 47.799 -36.896 1.00 1.71 \ ATOM 102 O LEU H 15 -14.247 48.316 -36.170 1.00 1.71 \ ATOM 103 CB LEU H 15 -13.966 46.597 -38.990 1.00 1.71 \ ATOM 104 CG LEU H 15 -14.373 46.559 -40.456 1.00 1.71 \ ATOM 105 CD1 LEU H 15 -14.857 45.185 -40.887 1.00 1.71 \ ATOM 106 CD2 LEU H 15 -15.462 47.574 -40.759 1.00 1.71 \ ATOM 107 N TYR H 16 -12.301 47.145 -36.392 1.00 -0.22 \ ATOM 108 CA TYR H 16 -12.102 47.062 -34.943 1.00 -0.22 \ ATOM 109 C TYR H 16 -12.222 48.483 -34.304 1.00 -0.22 \ ATOM 110 O TYR H 16 -12.959 48.744 -33.335 1.00 -0.22 \ ATOM 111 CB TYR H 16 -10.789 46.368 -34.620 1.00 -0.22 \ ATOM 112 CG TYR H 16 -10.504 46.305 -33.139 1.00 -0.22 \ ATOM 113 CD1 TYR H 16 -11.200 45.482 -32.334 1.00 -0.22 \ ATOM 114 CD2 TYR H 16 -9.575 47.135 -32.562 1.00 -0.22 \ ATOM 115 CE1 TYR H 16 -10.981 45.470 -30.980 1.00 -0.22 \ ATOM 116 CE2 TYR H 16 -9.318 47.118 -31.227 1.00 -0.22 \ ATOM 117 CZ TYR H 16 -10.026 46.277 -30.432 1.00 -0.22 \ ATOM 118 OH TYR H 16 -9.807 46.263 -29.066 1.00 -0.22 \ ATOM 119 N LEU H 17 -11.555 49.418 -34.945 1.00 -0.23 \ ATOM 120 CA LEU H 17 -11.493 50.773 -34.455 1.00 -0.23 \ ATOM 121 C LEU H 17 -12.814 51.565 -34.608 1.00 -0.23 \ ATOM 122 O LEU H 17 -13.237 52.212 -33.656 1.00 -0.23 \ ATOM 123 CB LEU H 17 -10.440 51.522 -35.214 1.00 -0.23 \ ATOM 124 CG LEU H 17 -9.810 52.601 -34.359 1.00 -0.23 \ ATOM 125 CD1 LEU H 17 -8.376 52.131 -34.132 1.00 -0.23 \ ATOM 126 CD2 LEU H 17 -9.812 53.940 -35.045 1.00 -0.23 \ ATOM 127 N VAL H 18 -13.408 51.513 -35.804 1.00 0.24 \ ATOM 128 CA VAL H 18 -14.628 52.228 -36.107 1.00 0.24 \ ATOM 129 C VAL H 18 -15.801 51.810 -35.288 1.00 0.24 \ ATOM 130 O VAL H 18 -16.499 52.671 -34.809 1.00 0.24 \ ATOM 131 CB VAL H 18 -15.010 52.158 -37.594 1.00 0.24 \ ATOM 132 CG1 VAL H 18 -16.301 52.897 -37.835 1.00 0.24 \ ATOM 133 CG2 VAL H 18 -13.941 52.897 -38.358 1.00 0.24 \ ATOM 134 N CYS H 19 -15.982 50.503 -35.133 1.00 1.71 \ ATOM 135 CA CYS H 19 -17.216 49.895 -34.626 1.00 1.71 \ ATOM 136 C CYS H 19 -17.374 49.913 -33.094 1.00 1.71 \ ATOM 137 O CYS H 19 -18.485 49.847 -32.565 1.00 1.71 \ ATOM 138 CB CYS H 19 -17.283 48.469 -35.167 1.00 1.71 \ ATOM 139 SG CYS H 19 -17.426 48.368 -36.985 1.00 1.71 \ ATOM 140 N GLY H 20 -16.274 49.974 -32.377 1.00 -0.18 \ ATOM 141 CA GLY H 20 -16.329 49.985 -30.918 1.00 -0.18 \ ATOM 142 C GLY H 20 -17.134 48.839 -30.317 1.00 -0.18 \ ATOM 143 O GLY H 20 -17.065 47.687 -30.809 1.00 -0.18 \ ATOM 144 N GLU H 21 -17.941 49.179 -29.290 1.00 0.19 \ ATOM 145 CA GLU H 21 -18.617 48.200 -28.466 1.00 0.19 \ ATOM 146 C GLU H 21 -19.609 47.381 -29.284 1.00 0.19 \ ATOM 147 O GLU H 21 -19.927 46.235 -28.925 1.00 0.19 \ ATOM 148 CB GLU H 21 -19.306 48.894 -27.308 1.00 0.19 \ ATOM 149 N ARG H 22 -20.069 47.955 -30.399 1.00 -0.63 \ ATOM 150 CA ARG H 22 -20.985 47.284 -31.327 1.00 -0.63 \ ATOM 151 C ARG H 22 -20.371 46.069 -32.048 1.00 -0.63 \ ATOM 152 O ARG H 22 -21.105 45.143 -32.419 1.00 -0.63 \ ATOM 153 CB ARG H 22 -21.472 48.278 -32.386 1.00 -0.63 \ ATOM 154 N GLY H 23 -19.054 46.048 -32.281 1.00 1.71 \ ATOM 155 CA GLY H 23 -18.465 44.845 -32.863 1.00 1.71 \ ATOM 156 C GLY H 23 -18.841 44.722 -34.338 1.00 1.71 \ ATOM 157 O GLY H 23 -19.355 45.666 -34.924 1.00 1.71 \ ATOM 158 N PHE H 24 -18.617 43.556 -34.940 1.00 1.12 \ ATOM 159 CA PHE H 24 -18.735 43.410 -36.388 1.00 1.12 \ ATOM 160 C PHE H 24 -18.545 41.977 -36.849 1.00 1.12 \ ATOM 161 O PHE H 24 -18.037 41.149 -36.131 1.00 1.12 \ ATOM 162 CB PHE H 24 -17.686 44.274 -37.123 1.00 1.12 \ ATOM 163 CG PHE H 24 -16.208 43.865 -36.921 1.00 1.12 \ ATOM 164 CD1 PHE H 24 -15.447 44.403 -35.928 1.00 1.12 \ ATOM 165 CD2 PHE H 24 -15.566 43.064 -37.815 1.00 1.12 \ ATOM 166 CE1 PHE H 24 -14.090 44.062 -35.790 1.00 1.12 \ ATOM 167 CE2 PHE H 24 -14.219 42.737 -37.693 1.00 1.12 \ ATOM 168 CZ PHE H 24 -13.504 43.180 -36.656 1.00 1.12 \ ATOM 169 N PHE H 25 -18.817 41.735 -38.101 1.00 0.52 \ ATOM 170 CA PHE H 25 -18.500 40.495 -38.749 1.00 0.52 \ ATOM 171 C PHE H 25 -17.581 40.701 -39.849 1.00 0.52 \ ATOM 172 O PHE H 25 -17.769 41.654 -40.587 1.00 0.52 \ ATOM 173 CB PHE H 25 -19.599 40.115 -39.658 1.00 0.52 \ ATOM 174 CG PHE H 25 -20.754 39.757 -39.022 1.00 0.52 \ ATOM 175 CD1 PHE H 25 -21.395 40.649 -38.230 1.00 0.52 \ ATOM 176 CD2 PHE H 25 -21.265 38.564 -39.279 1.00 0.52 \ ATOM 177 CE1 PHE H 25 -22.551 40.336 -37.662 1.00 0.52 \ ATOM 178 CE2 PHE H 25 -22.435 38.217 -38.712 1.00 0.52 \ ATOM 179 CZ PHE H 25 -23.080 39.108 -37.894 1.00 0.52 \ ATOM 180 N TYR H 26 -16.767 39.713 -40.140 1.00 -0.25 \ ATOM 181 CA TYR H 26 -15.986 39.843 -41.314 1.00 -0.25 \ ATOM 182 C TYR H 26 -16.289 38.617 -42.058 1.00 -0.25 \ ATOM 183 O TYR H 26 -16.136 37.553 -41.503 1.00 -0.25 \ ATOM 184 CB TYR H 26 -14.490 40.006 -41.001 1.00 -0.25 \ ATOM 185 CG TYR H 26 -13.649 40.036 -42.245 1.00 -0.25 \ ATOM 186 CD1 TYR H 26 -13.710 41.104 -43.087 1.00 -0.25 \ ATOM 187 CD2 TYR H 26 -12.873 38.944 -42.621 1.00 -0.25 \ ATOM 188 CE1 TYR H 26 -12.988 41.123 -44.279 1.00 -0.25 \ ATOM 189 CE2 TYR H 26 -12.118 38.948 -43.811 1.00 -0.25 \ ATOM 190 CZ TYR H 26 -12.168 40.059 -44.632 1.00 -0.25 \ ATOM 191 OH TYR H 26 -11.449 40.175 -45.823 1.00 -0.25 \ ATOM 192 N THR H 27 -16.705 38.785 -43.316 1.00 -0.98 \ ATOM 193 CA THR H 27 -16.813 37.675 -44.252 1.00 -0.98 \ ATOM 194 C THR H 27 -16.057 37.943 -45.563 1.00 -0.98 \ ATOM 195 O THR H 27 -16.570 38.649 -46.442 1.00 -0.98 \ ATOM 196 CB THR H 27 -18.299 37.416 -44.601 1.00 -0.98 \ ATOM 197 OG1 THR H 27 -19.145 38.183 -43.740 1.00 -0.98 \ ATOM 198 CG2 THR H 27 -18.624 35.928 -44.477 1.00 -0.98 \ """, "e5uruH1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5uruH1_csv", state=0, origin=1) cmd.zoom("e5uruH1_csv", animate=-1)