cmd.read_pdbstr("""\ ATOM 1 CA PHE D 1 4.222 8.956 17.948 1.00 -1.00 \ ATOM 2 C PHE D 1 4.363 8.136 16.670 1.00 -1.00 \ ATOM 3 O PHE D 1 3.899 8.541 15.602 1.00 -1.00 \ ATOM 4 N VAL D 2 5.022 6.989 16.782 1.00 -1.00 \ ATOM 5 CA VAL D 2 5.161 6.093 15.642 1.00 -1.00 \ ATOM 6 C VAL D 2 3.799 5.538 15.261 1.00 -1.00 \ ATOM 7 O VAL D 2 3.423 5.547 14.092 1.00 -1.00 \ ATOM 8 CB VAL D 2 6.108 4.924 15.936 1.00 -1.00 \ ATOM 9 CG1 VAL D 2 5.988 3.874 14.853 1.00 -1.00 \ ATOM 10 CG2 VAL D 2 7.529 5.411 16.014 1.00 -1.00 \ ATOM 11 N ASN D 3 3.052 5.074 16.258 1.00 -0.47 \ ATOM 12 CA ASN D 3 1.713 4.559 16.004 1.00 -0.47 \ ATOM 13 C ASN D 3 0.904 5.606 15.241 1.00 -0.47 \ ATOM 14 O ASN D 3 0.205 5.276 14.284 1.00 -0.47 \ ATOM 15 CB ASN D 3 1.010 4.173 17.313 1.00 -0.47 \ ATOM 16 N GLN D 4 1.059 6.872 15.627 1.00 0.23 \ ATOM 17 CA GLN D 4 0.338 7.953 14.975 1.00 0.23 \ ATOM 18 C GLN D 4 0.818 8.084 13.550 1.00 0.23 \ ATOM 19 O GLN D 4 0.032 8.350 12.650 1.00 0.23 \ ATOM 20 CB GLN D 4 0.519 9.272 15.732 1.00 0.23 \ ATOM 21 N HIS D 5 2.112 7.887 13.340 1.00 -0.04 \ ATOM 22 CA HIS D 5 2.669 7.981 11.999 1.00 -0.04 \ ATOM 23 C HIS D 5 2.105 6.897 11.056 1.00 -0.04 \ ATOM 24 O HIS D 5 1.743 7.175 9.916 1.00 -0.04 \ ATOM 25 CB HIS D 5 4.193 7.892 12.057 1.00 -0.04 \ ATOM 26 CG HIS D 5 4.853 7.988 10.717 1.00 -0.04 \ ATOM 27 ND1 HIS D 5 5.032 9.187 10.063 1.00 -0.04 \ ATOM 28 CD2 HIS D 5 5.356 7.034 9.897 1.00 -0.04 \ ATOM 29 CE1 HIS D 5 5.628 8.970 8.904 1.00 -0.04 \ ATOM 30 NE2 HIS D 5 5.834 7.671 8.778 1.00 -0.04 \ ATOM 31 N LEU D 6 2.029 5.666 11.539 1.00 1.14 \ ATOM 32 CA LEU D 6 1.532 4.558 10.742 1.00 1.14 \ ATOM 33 C LEU D 6 0.073 4.792 10.397 1.00 1.14 \ ATOM 34 O LEU D 6 -0.345 4.612 9.267 1.00 1.14 \ ATOM 35 CB LEU D 6 1.704 3.242 11.499 1.00 1.14 \ ATOM 36 CG LEU D 6 3.142 2.858 11.845 1.00 1.14 \ ATOM 37 CD1 LEU D 6 3.214 1.506 12.556 1.00 1.14 \ ATOM 38 CD2 LEU D 6 3.977 2.807 10.597 1.00 1.14 \ ATOM 39 N CYS D 7 -0.688 5.241 11.377 1.00 1.71 \ ATOM 40 CA CYS D 7 -2.091 5.540 11.157 1.00 1.71 \ ATOM 41 C CYS D 7 -2.293 6.602 10.058 1.00 1.71 \ ATOM 42 O CYS D 7 -3.165 6.449 9.212 1.00 1.71 \ ATOM 43 CB CYS D 7 -2.734 5.994 12.464 1.00 1.71 \ ATOM 44 SG CYS D 7 -4.482 6.441 12.330 1.00 1.71 \ ATOM 45 N GLY D 8 -1.477 7.654 10.040 1.00 0.69 \ ATOM 46 CA GLY D 8 -1.635 8.702 9.048 1.00 0.69 \ ATOM 47 C GLY D 8 -1.504 8.162 7.638 1.00 0.69 \ ATOM 48 O GLY D 8 -2.240 8.552 6.741 1.00 0.69 \ ATOM 49 N SER D 9 -0.576 7.232 7.444 1.00 -0.48 \ ATOM 50 CA SER D 9 -0.394 6.621 6.141 1.00 -0.48 \ ATOM 51 C SER D 9 -1.693 5.985 5.639 1.00 -0.48 \ ATOM 52 O SER D 9 -2.064 6.114 4.478 1.00 -0.48 \ ATOM 53 CB SER D 9 0.709 5.579 6.198 1.00 -0.48 \ ATOM 54 OG SER D 9 0.675 4.809 5.024 1.00 -0.48 \ ATOM 55 N HIS D 10 -2.396 5.323 6.541 1.00 -0.23 \ ATOM 56 CA HIS D 10 -3.652 4.699 6.184 1.00 -0.23 \ ATOM 57 C HIS D 10 -4.753 5.747 6.017 1.00 -0.23 \ ATOM 58 O HIS D 10 -5.608 5.609 5.149 1.00 -0.23 \ ATOM 59 CB HIS D 10 -4.038 3.655 7.235 1.00 -0.23 \ ATOM 60 CG HIS D 10 -3.171 2.427 7.205 1.00 -0.23 \ ATOM 61 ND1 HIS D 10 -3.419 1.355 6.376 1.00 -0.23 \ ATOM 62 CD2 HIS D 10 -2.042 2.117 7.886 1.00 -0.23 \ ATOM 63 CE1 HIS D 10 -2.491 0.436 6.555 1.00 -0.23 \ ATOM 64 NE2 HIS D 10 -1.652 0.870 7.476 1.00 -0.23 \ ATOM 65 N LEU D 11 -4.712 6.815 6.803 1.00 1.71 \ ATOM 66 CA LEU D 11 -5.685 7.895 6.620 1.00 1.71 \ ATOM 67 C LEU D 11 -5.621 8.475 5.214 1.00 1.71 \ ATOM 68 O LEU D 11 -6.642 8.685 4.574 1.00 1.71 \ ATOM 69 CB LEU D 11 -5.467 9.008 7.636 1.00 1.71 \ ATOM 70 CG LEU D 11 -6.116 8.876 9.002 1.00 1.71 \ ATOM 71 CD1 LEU D 11 -5.713 10.070 9.843 1.00 1.71 \ ATOM 72 CD2 LEU D 11 -7.629 8.800 8.880 1.00 1.71 \ ATOM 73 N VAL D 12 -4.423 8.741 4.716 1.00 0.69 \ ATOM 74 CA VAL D 12 -4.354 9.400 3.423 1.00 0.69 \ ATOM 75 C VAL D 12 -4.800 8.429 2.334 1.00 0.69 \ ATOM 76 O VAL D 12 -5.438 8.859 1.386 1.00 0.69 \ ATOM 77 CB VAL D 12 -2.955 10.006 3.112 1.00 0.69 \ ATOM 78 CG1 VAL D 12 -2.637 11.155 4.104 1.00 0.69 \ ATOM 79 CG2 VAL D 12 -1.871 8.979 3.112 1.00 0.69 \ ATOM 80 N GLU D 13 -4.476 7.139 2.449 1.00 0.66 \ ATOM 81 CA GLU D 13 -4.969 6.181 1.449 1.00 0.66 \ ATOM 82 C GLU D 13 -6.496 6.185 1.411 1.00 0.66 \ ATOM 83 O GLU D 13 -7.095 6.170 0.341 1.00 0.66 \ ATOM 84 CB GLU D 13 -4.457 4.750 1.726 1.00 0.66 \ ATOM 85 N ALA D 14 -7.110 6.206 2.588 1.00 -0.03 \ ATOM 86 CA ALA D 14 -8.568 6.228 2.711 1.00 -0.03 \ ATOM 87 C ALA D 14 -9.180 7.515 2.145 1.00 -0.03 \ ATOM 88 O ALA D 14 -10.181 7.472 1.422 1.00 -0.03 \ ATOM 89 CB ALA D 14 -8.972 6.055 4.144 1.00 -0.03 \ ATOM 90 N LEU D 15 -8.602 8.662 2.491 1.00 1.71 \ ATOM 91 CA LEU D 15 -9.075 9.920 1.921 1.00 1.71 \ ATOM 92 C LEU D 15 -8.977 9.898 0.406 1.00 1.71 \ ATOM 93 O LEU D 15 -9.873 10.368 -0.278 1.00 1.71 \ ATOM 94 CB LEU D 15 -8.275 11.106 2.460 1.00 1.71 \ ATOM 95 CG LEU D 15 -8.556 11.526 3.892 1.00 1.71 \ ATOM 96 CD1 LEU D 15 -7.653 12.691 4.234 1.00 1.71 \ ATOM 97 CD2 LEU D 15 -9.982 11.933 4.022 1.00 1.71 \ ATOM 98 N TYR D 16 -7.882 9.346 -0.117 1.00 -0.22 \ ATOM 99 CA TYR D 16 -7.716 9.244 -1.561 1.00 -0.22 \ ATOM 100 C TYR D 16 -8.909 8.527 -2.229 1.00 -0.22 \ ATOM 101 O TYR D 16 -9.441 8.994 -3.240 1.00 -0.22 \ ATOM 102 CB TYR D 16 -6.417 8.521 -1.892 1.00 -0.22 \ ATOM 103 CG TYR D 16 -6.185 8.332 -3.367 1.00 -0.22 \ ATOM 104 CD1 TYR D 16 -5.705 9.370 -4.153 1.00 -0.22 \ ATOM 105 CD2 TYR D 16 -6.434 7.109 -3.978 1.00 -0.22 \ ATOM 106 CE1 TYR D 16 -5.495 9.198 -5.517 1.00 -0.22 \ ATOM 107 CE2 TYR D 16 -6.220 6.931 -5.335 1.00 -0.22 \ ATOM 108 CZ TYR D 16 -5.754 7.968 -6.100 1.00 -0.22 \ ATOM 109 OH TYR D 16 -5.538 7.788 -7.451 1.00 -0.22 \ ATOM 110 N LEU D 17 -9.343 7.407 -1.653 1.00 -0.23 \ ATOM 111 CA LEU D 17 -10.442 6.639 -2.240 1.00 -0.23 \ ATOM 112 C LEU D 17 -11.764 7.367 -2.013 1.00 -0.23 \ ATOM 113 O LEU D 17 -12.566 7.494 -2.914 1.00 -0.23 \ ATOM 114 CB LEU D 17 -10.501 5.213 -1.664 1.00 -0.23 \ ATOM 115 N VAL D 18 -11.975 7.867 -0.806 1.00 0.24 \ ATOM 116 CA VAL D 18 -13.230 8.503 -0.454 1.00 0.24 \ ATOM 117 C VAL D 18 -13.465 9.800 -1.218 1.00 0.24 \ ATOM 118 O VAL D 18 -14.541 10.047 -1.740 1.00 0.24 \ ATOM 119 CB VAL D 18 -13.261 8.799 1.033 1.00 0.24 \ ATOM 120 CG1 VAL D 18 -14.459 9.662 1.377 1.00 0.24 \ ATOM 121 CG2 VAL D 18 -13.284 7.501 1.814 1.00 0.24 \ ATOM 122 N CYS D 19 -12.434 10.624 -1.307 1.00 1.71 \ ATOM 123 CA CYS D 19 -12.603 11.939 -1.884 1.00 1.71 \ ATOM 124 C CYS D 19 -12.651 11.907 -3.415 1.00 1.71 \ ATOM 125 O CYS D 19 -13.303 12.744 -4.038 1.00 1.71 \ ATOM 126 CB CYS D 19 -11.497 12.861 -1.387 1.00 1.71 \ ATOM 127 SG CYS D 19 -11.501 13.011 0.414 1.00 1.71 \ ATOM 128 N GLY D 20 -11.958 10.949 -4.015 1.00 -0.18 \ ATOM 129 CA GLY D 20 -11.976 10.803 -5.459 1.00 -0.18 \ ATOM 130 C GLY D 20 -11.544 12.057 -6.199 1.00 -0.18 \ ATOM 131 O GLY D 20 -10.549 12.673 -5.832 1.00 -0.18 \ ATOM 132 N GLU D 21 -12.324 12.452 -7.208 1.00 0.19 \ ATOM 133 CA GLU D 21 -11.994 13.589 -8.069 1.00 0.19 \ ATOM 134 C GLU D 21 -11.908 14.903 -7.299 1.00 0.19 \ ATOM 135 O GLU D 21 -11.208 15.820 -7.702 1.00 0.19 \ ATOM 136 CB GLU D 21 -13.020 13.727 -9.197 1.00 0.19 \ ATOM 137 N ARG D 22 -12.634 14.988 -6.194 1.00 -0.63 \ ATOM 138 CA ARG D 22 -12.574 16.162 -5.337 1.00 -0.63 \ ATOM 139 C ARG D 22 -11.169 16.453 -4.811 1.00 -0.63 \ ATOM 140 O ARG D 22 -10.750 17.609 -4.750 1.00 -0.63 \ ATOM 141 CB ARG D 22 -13.536 16.004 -4.165 1.00 -0.63 \ ATOM 142 CG ARG D 22 -15.009 16.170 -4.528 1.00 -0.63 \ ATOM 143 CD ARG D 22 -15.896 15.829 -3.347 1.00 -0.63 \ ATOM 144 NE ARG D 22 -15.836 14.398 -3.062 1.00 -0.63 \ ATOM 145 CZ ARG D 22 -16.470 13.798 -2.061 1.00 -0.63 \ ATOM 146 NH1 ARG D 22 -17.192 14.513 -1.212 1.00 -0.63 \ ATOM 147 NH2 ARG D 22 -16.361 12.483 -1.899 1.00 -0.63 \ ATOM 148 N GLY D 23 -10.448 15.419 -4.400 1.00 1.71 \ ATOM 149 CA GLY D 23 -9.144 15.640 -3.805 1.00 1.71 \ ATOM 150 C GLY D 23 -9.236 16.079 -2.353 1.00 1.71 \ ATOM 151 O GLY D 23 -10.320 16.131 -1.784 1.00 1.71 \ ATOM 152 N PHE D 24 -8.100 16.398 -1.747 1.00 1.12 \ ATOM 153 CA PHE D 24 -8.087 16.744 -0.342 1.00 1.12 \ ATOM 154 C PHE D 24 -6.810 17.451 0.071 1.00 1.12 \ ATOM 155 O PHE D 24 -5.806 17.431 -0.646 1.00 1.12 \ ATOM 156 CB PHE D 24 -8.304 15.485 0.512 1.00 1.12 \ ATOM 157 CG PHE D 24 -7.229 14.447 0.362 1.00 1.12 \ ATOM 158 CD1 PHE D 24 -7.281 13.521 -0.658 1.00 1.12 \ ATOM 159 CD2 PHE D 24 -6.178 14.391 1.249 1.00 1.12 \ ATOM 160 CE1 PHE D 24 -6.269 12.554 -0.801 1.00 1.12 \ ATOM 161 CE2 PHE D 24 -5.168 13.435 1.115 1.00 1.12 \ ATOM 162 CZ PHE D 24 -5.217 12.521 0.094 1.00 1.12 \ ATOM 163 N PHE D 25 -6.860 18.044 1.256 1.00 0.52 \ ATOM 164 CA PHE D 25 -5.699 18.617 1.903 1.00 0.52 \ ATOM 165 C PHE D 25 -5.398 17.715 3.080 1.00 0.52 \ ATOM 166 O PHE D 25 -6.313 17.292 3.781 1.00 0.52 \ ATOM 167 CB PHE D 25 -5.973 20.047 2.392 1.00 0.52 \ ATOM 168 CG PHE D 25 -5.578 21.122 1.415 1.00 0.52 \ ATOM 169 CD1 PHE D 25 -6.291 21.316 0.241 1.00 0.52 \ ATOM 170 CD2 PHE D 25 -4.493 21.951 1.676 1.00 0.52 \ ATOM 171 CE1 PHE D 25 -5.920 22.305 -0.661 1.00 0.52 \ ATOM 172 CE2 PHE D 25 -4.117 22.942 0.777 1.00 0.52 \ ATOM 173 CZ PHE D 25 -4.834 23.120 -0.391 1.00 0.52 \ ATOM 174 N TYR D 26 -4.133 17.405 3.309 1.00 -0.25 \ ATOM 175 CA TYR D 26 -3.788 16.658 4.511 1.00 -0.25 \ ATOM 176 C TYR D 26 -2.985 17.569 5.425 1.00 -0.25 \ ATOM 177 O TYR D 26 -1.869 17.971 5.101 1.00 -0.25 \ ATOM 178 CB TYR D 26 -3.008 15.367 4.191 1.00 -0.25 \ ATOM 179 CG TYR D 26 -2.606 14.626 5.451 1.00 -0.25 \ ATOM 180 CD1 TYR D 26 -3.537 13.905 6.175 1.00 -0.25 \ ATOM 181 CD2 TYR D 26 -1.313 14.681 5.938 1.00 -0.25 \ ATOM 182 CE1 TYR D 26 -3.193 13.251 7.343 1.00 -0.25 \ ATOM 183 CE2 TYR D 26 -0.955 14.026 7.112 1.00 -0.25 \ ATOM 184 CZ TYR D 26 -1.903 13.314 7.802 1.00 -0.25 \ ATOM 185 OH TYR D 26 -1.575 12.664 8.965 1.00 -0.25 \ ATOM 186 N THR D 27 -3.574 17.908 6.566 1.00 -0.98 \ ATOM 187 CA THR D 27 -2.902 18.759 7.530 1.00 -0.98 \ ATOM 188 C THR D 27 -2.920 18.121 8.914 1.00 -0.98 \ ATOM 189 O THR D 27 -3.972 18.025 9.540 1.00 -0.98 \ ATOM 190 CB THR D 27 -3.551 20.142 7.591 1.00 -0.98 \ ATOM 191 OG1 THR D 27 -4.860 20.025 8.149 1.00 -0.98 \ ATOM 192 CG2 THR D 27 -3.676 20.733 6.199 1.00 -0.98 \ """, "e5ussD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5ussD1_csv", state=0, origin=1) cmd.zoom("e5ussD1_csv", animate=-1)