cmd.read_pdbstr("""\ ATOM 1 N VAL P 2 -21.925 11.866 26.422 1.00 -1.00 \ ATOM 2 CA VAL P 2 -20.468 11.840 26.363 1.00 -1.00 \ ATOM 3 C VAL P 2 -19.883 11.088 27.556 1.00 -1.00 \ ATOM 4 O VAL P 2 -18.667 11.051 27.744 1.00 -1.00 \ ATOM 5 CB VAL P 2 -19.880 13.263 26.321 1.00 -1.00 \ ATOM 6 N ASN P 3 -20.758 10.497 28.363 1.00 -0.47 \ ATOM 7 CA ASN P 3 -20.331 9.714 29.517 1.00 -0.47 \ ATOM 8 C ASN P 3 -19.532 8.484 29.101 1.00 -0.47 \ ATOM 9 O ASN P 3 -18.622 8.055 29.809 1.00 -0.47 \ ATOM 10 CB ASN P 3 -21.540 9.294 30.355 1.00 -0.47 \ ATOM 11 N GLN P 4 -19.879 7.921 27.948 1.00 0.23 \ ATOM 12 CA GLN P 4 -19.177 6.761 27.421 1.00 0.23 \ ATOM 13 C GLN P 4 -17.754 7.134 27.035 1.00 0.23 \ ATOM 14 O GLN P 4 -16.818 6.357 27.231 1.00 0.23 \ ATOM 15 CB GLN P 4 -19.919 6.181 26.215 1.00 0.23 \ ATOM 16 N HIS P 5 -17.598 8.333 26.487 1.00 -0.04 \ ATOM 17 CA HIS P 5 -16.286 8.818 26.085 1.00 -0.04 \ ATOM 18 C HIS P 5 -15.354 8.981 27.287 1.00 -0.04 \ ATOM 19 O HIS P 5 -14.172 8.659 27.210 1.00 -0.04 \ ATOM 20 CB HIS P 5 -16.424 10.138 25.321 1.00 -0.04 \ ATOM 21 CG HIS P 5 -15.122 10.687 24.834 1.00 -0.04 \ ATOM 22 ND1 HIS P 5 -14.274 9.973 24.016 1.00 -0.04 \ ATOM 23 CD2 HIS P 5 -14.533 11.890 25.031 1.00 -0.04 \ ATOM 24 CE1 HIS P 5 -13.207 10.705 23.747 1.00 -0.04 \ ATOM 25 NE2 HIS P 5 -13.342 11.875 24.346 1.00 -0.04 \ ATOM 26 N LEU P 6 -15.887 9.488 28.394 1.00 1.14 \ ATOM 27 CA LEU P 6 -15.102 9.637 29.613 1.00 1.14 \ ATOM 28 C LEU P 6 -14.771 8.277 30.223 1.00 1.14 \ ATOM 29 O LEU P 6 -13.631 8.022 30.612 1.00 1.14 \ ATOM 30 CB LEU P 6 -15.840 10.516 30.626 1.00 1.14 \ ATOM 31 CG LEU P 6 -16.103 11.943 30.140 1.00 1.14 \ ATOM 32 CD1 LEU P 6 -16.766 12.789 31.224 1.00 1.14 \ ATOM 33 CD2 LEU P 6 -14.816 12.597 29.646 1.00 1.14 \ ATOM 34 N CYS P 7 -15.771 7.405 30.303 1.00 1.71 \ ATOM 35 CA CYS P 7 -15.564 6.053 30.810 1.00 1.71 \ ATOM 36 C CYS P 7 -14.486 5.315 30.023 1.00 1.71 \ ATOM 37 O CYS P 7 -13.658 4.609 30.601 1.00 1.71 \ ATOM 38 CB CYS P 7 -16.869 5.260 30.764 1.00 1.71 \ ATOM 39 SG CYS P 7 -16.685 3.524 31.203 1.00 1.71 \ ATOM 40 N GLY P 8 -14.503 5.488 28.703 1.00 0.69 \ ATOM 41 CA GLY P 8 -13.523 4.866 27.831 1.00 0.69 \ ATOM 42 C GLY P 8 -12.110 5.269 28.191 1.00 0.69 \ ATOM 43 O GLY P 8 -11.190 4.457 28.154 1.00 0.69 \ ATOM 44 N SER P 9 -11.941 6.534 28.552 1.00 -0.48 \ ATOM 45 CA SER P 9 -10.639 7.043 28.962 1.00 -0.48 \ ATOM 46 C SER P 9 -10.111 6.276 30.174 1.00 -0.48 \ ATOM 47 O SER P 9 -8.949 5.881 30.218 1.00 -0.48 \ ATOM 48 CB SER P 9 -10.734 8.539 29.281 1.00 -0.48 \ ATOM 49 OG SER P 9 -9.519 9.004 29.837 1.00 -0.48 \ ATOM 50 N HIS P 10 -10.978 6.043 31.147 1.00 -0.23 \ ATOM 51 CA HIS P 10 -10.574 5.281 32.319 1.00 -0.23 \ ATOM 52 C HIS P 10 -10.377 3.805 31.964 1.00 -0.23 \ ATOM 53 O HIS P 10 -9.508 3.144 32.524 1.00 -0.23 \ ATOM 54 CB HIS P 10 -11.590 5.438 33.447 1.00 -0.23 \ ATOM 55 CG HIS P 10 -11.614 6.810 34.042 1.00 -0.23 \ ATOM 56 ND1 HIS P 10 -10.741 7.208 35.032 1.00 -0.23 \ ATOM 57 CD2 HIS P 10 -12.409 7.878 33.792 1.00 -0.23 \ ATOM 58 CE1 HIS P 10 -10.998 8.459 35.367 1.00 -0.23 \ ATOM 59 NE2 HIS P 10 -12.008 8.886 34.631 1.00 -0.23 \ ATOM 60 N LEU P 11 -11.181 3.297 31.033 1.00 1.71 \ ATOM 61 CA LEU P 11 -11.078 1.901 30.621 1.00 1.71 \ ATOM 62 C LEU P 11 -9.715 1.569 30.009 1.00 1.71 \ ATOM 63 O LEU P 11 -9.119 0.542 30.342 1.00 1.71 \ ATOM 64 CB LEU P 11 -12.188 1.554 29.627 1.00 1.71 \ ATOM 65 CG LEU P 11 -13.566 1.243 30.213 1.00 1.71 \ ATOM 66 CD1 LEU P 11 -14.550 0.907 29.105 1.00 1.71 \ ATOM 67 CD2 LEU P 11 -13.483 0.105 31.225 1.00 1.71 \ ATOM 68 N VAL P 12 -9.219 2.436 29.127 1.00 0.69 \ ATOM 69 CA VAL P 12 -7.939 2.185 28.465 1.00 0.69 \ ATOM 70 C VAL P 12 -6.791 2.276 29.465 1.00 0.69 \ ATOM 71 O VAL P 12 -5.804 1.552 29.352 1.00 0.69 \ ATOM 72 CB VAL P 12 -7.682 3.160 27.289 1.00 0.69 \ ATOM 73 CG1 VAL P 12 -8.652 2.879 26.139 1.00 0.69 \ ATOM 74 CG2 VAL P 12 -7.783 4.606 27.743 1.00 0.69 \ ATOM 75 N GLU P 13 -6.916 3.171 30.440 1.00 0.66 \ ATOM 76 CA GLU P 13 -5.936 3.244 31.522 1.00 0.66 \ ATOM 77 C GLU P 13 -5.939 1.941 32.330 1.00 0.66 \ ATOM 78 O GLU P 13 -4.887 1.406 32.684 1.00 0.66 \ ATOM 79 CB GLU P 13 -6.228 4.435 32.444 1.00 0.66 \ ATOM 80 N ALA P 14 -7.130 1.434 32.616 1.00 -0.03 \ ATOM 81 CA ALA P 14 -7.251 0.197 33.371 1.00 -0.03 \ ATOM 82 C ALA P 14 -6.700 -0.977 32.554 1.00 -0.03 \ ATOM 83 O ALA P 14 -5.978 -1.821 33.086 1.00 -0.03 \ ATOM 84 CB ALA P 14 -8.696 -0.044 33.775 1.00 -0.03 \ ATOM 85 N LEU P 15 -7.042 -1.027 31.268 1.00 1.71 \ ATOM 86 CA LEU P 15 -6.543 -2.087 30.392 1.00 1.71 \ ATOM 87 C LEU P 15 -5.024 -2.035 30.319 1.00 1.71 \ ATOM 88 O LEU P 15 -4.356 -3.074 30.280 1.00 1.71 \ ATOM 89 CB LEU P 15 -7.145 -1.971 28.985 1.00 1.71 \ ATOM 90 CG LEU P 15 -8.619 -2.335 28.791 1.00 1.71 \ ATOM 91 CD1 LEU P 15 -9.104 -1.934 27.403 1.00 1.71 \ ATOM 92 CD2 LEU P 15 -8.794 -3.826 28.980 1.00 1.71 \ ATOM 93 N TYR P 16 -4.485 -0.818 30.311 1.00 -0.22 \ ATOM 94 CA TYR P 16 -3.044 -0.621 30.249 1.00 -0.22 \ ATOM 95 C TYR P 16 -2.337 -1.237 31.451 1.00 -0.22 \ ATOM 96 O TYR P 16 -1.261 -1.813 31.318 1.00 -0.22 \ ATOM 97 CB TYR P 16 -2.702 0.868 30.155 1.00 -0.22 \ ATOM 98 CG TYR P 16 -1.215 1.128 30.198 1.00 -0.22 \ ATOM 99 CD1 TYR P 16 -0.426 0.922 29.075 1.00 -0.22 \ ATOM 100 CD2 TYR P 16 -0.596 1.564 31.363 1.00 -0.22 \ ATOM 101 CE1 TYR P 16 0.935 1.146 29.106 1.00 -0.22 \ ATOM 102 CE2 TYR P 16 0.767 1.792 31.405 1.00 -0.22 \ ATOM 103 CZ TYR P 16 1.529 1.581 30.271 1.00 -0.22 \ ATOM 104 OH TYR P 16 2.888 1.808 30.293 1.00 -0.22 \ ATOM 105 N LEU P 17 -2.943 -1.105 32.625 1.00 -0.23 \ ATOM 106 CA LEU P 17 -2.349 -1.641 33.843 1.00 -0.23 \ ATOM 107 C LEU P 17 -2.525 -3.159 33.928 1.00 -0.23 \ ATOM 108 O LEU P 17 -1.580 -3.888 34.224 1.00 -0.23 \ ATOM 109 CB LEU P 17 -2.961 -0.969 35.076 1.00 -0.23 \ ATOM 110 CG LEU P 17 -2.489 -1.501 36.429 1.00 -0.23 \ ATOM 111 CD1 LEU P 17 -1.075 -1.021 36.717 1.00 -0.23 \ ATOM 112 CD2 LEU P 17 -3.441 -1.107 37.557 1.00 -0.23 \ ATOM 113 N VAL P 18 -3.742 -3.621 33.660 1.00 0.24 \ ATOM 114 CA VAL P 18 -4.095 -5.030 33.813 1.00 0.24 \ ATOM 115 C VAL P 18 -3.460 -5.942 32.763 1.00 0.24 \ ATOM 116 O VAL P 18 -2.999 -7.032 33.082 1.00 0.24 \ ATOM 117 CB VAL P 18 -5.624 -5.229 33.763 1.00 0.24 \ ATOM 118 N CYS P 19 -3.441 -5.502 31.511 1.00 1.71 \ ATOM 119 CA CYS P 19 -2.988 -6.363 30.424 1.00 1.71 \ ATOM 120 C CYS P 19 -1.473 -6.516 30.413 1.00 1.71 \ ATOM 121 O CYS P 19 -0.948 -7.531 29.947 1.00 1.71 \ ATOM 122 CB CYS P 19 -3.474 -5.820 29.086 1.00 1.71 \ ATOM 123 SG CYS P 19 -5.264 -5.822 28.954 1.00 1.71 \ ATOM 124 N GLY P 20 -0.777 -5.514 30.942 1.00 -0.18 \ ATOM 125 CA GLY P 20 0.669 -5.560 31.056 1.00 -0.18 \ ATOM 126 C GLY P 20 1.394 -5.857 29.757 1.00 -0.18 \ ATOM 127 O GLY P 20 1.231 -5.145 28.766 1.00 -0.18 \ ATOM 128 N GLU P 21 2.192 -6.922 29.764 1.00 0.19 \ ATOM 129 CA GLU P 21 3.033 -7.268 28.623 1.00 0.19 \ ATOM 130 C GLU P 21 2.229 -7.753 27.420 1.00 0.19 \ ATOM 131 O GLU P 21 2.662 -7.607 26.278 1.00 0.19 \ ATOM 132 CB GLU P 21 4.052 -8.336 29.025 1.00 0.19 \ ATOM 133 N ARG P 22 1.063 -8.336 27.680 1.00 -0.63 \ ATOM 134 CA ARG P 22 0.219 -8.853 26.609 1.00 -0.63 \ ATOM 135 C ARG P 22 -0.269 -7.741 25.684 1.00 -0.63 \ ATOM 136 O ARG P 22 -0.500 -7.967 24.495 1.00 -0.63 \ ATOM 137 CB ARG P 22 -0.978 -9.608 27.192 1.00 -0.63 \ ATOM 138 N GLY P 23 -0.416 -6.540 26.232 1.00 1.71 \ ATOM 139 CA GLY P 23 -0.951 -5.423 25.475 1.00 1.71 \ ATOM 140 C GLY P 23 -2.440 -5.597 25.249 1.00 1.71 \ ATOM 141 O GLY P 23 -3.056 -6.505 25.795 1.00 1.71 \ ATOM 142 N PHE P 24 -3.026 -4.727 24.437 1.00 1.12 \ ATOM 143 CA PHE P 24 -4.454 -4.800 24.180 1.00 1.12 \ ATOM 144 C PHE P 24 -4.851 -4.024 22.934 1.00 1.12 \ ATOM 145 O PHE P 24 -4.041 -3.307 22.347 1.00 1.12 \ ATOM 146 CB PHE P 24 -5.230 -4.281 25.393 1.00 1.12 \ ATOM 147 CG PHE P 24 -5.034 -2.812 25.652 1.00 1.12 \ ATOM 148 CD1 PHE P 24 -3.925 -2.364 26.349 1.00 1.12 \ ATOM 149 CD2 PHE P 24 -5.960 -1.885 25.211 1.00 1.12 \ ATOM 150 CE1 PHE P 24 -3.741 -1.010 26.595 1.00 1.12 \ ATOM 151 CE2 PHE P 24 -5.782 -0.532 25.454 1.00 1.12 \ ATOM 152 CZ PHE P 24 -4.668 -0.097 26.146 1.00 1.12 \ ATOM 153 N PHE P 25 -6.108 -4.186 22.540 1.00 0.52 \ ATOM 154 CA PHE P 25 -6.683 -3.464 21.416 1.00 0.52 \ ATOM 155 C PHE P 25 -7.903 -2.713 21.924 1.00 0.52 \ ATOM 156 O PHE P 25 -8.639 -3.226 22.769 1.00 0.52 \ ATOM 157 CB PHE P 25 -7.072 -4.422 20.287 1.00 0.52 \ ATOM 158 CG PHE P 25 -5.979 -4.664 19.286 1.00 0.52 \ ATOM 159 CD1 PHE P 25 -4.977 -5.583 19.542 1.00 0.52 \ ATOM 160 CD2 PHE P 25 -5.969 -3.992 18.076 1.00 0.52 \ ATOM 161 CE1 PHE P 25 -3.973 -5.815 18.613 1.00 0.52 \ ATOM 162 CE2 PHE P 25 -4.973 -4.220 17.145 1.00 0.52 \ ATOM 163 CZ PHE P 25 -3.972 -5.131 17.414 1.00 0.52 \ ATOM 164 N TYR P 26 -8.132 -1.504 21.424 1.00 -0.25 \ ATOM 165 CA TYR P 26 -9.337 -0.790 21.813 1.00 -0.25 \ ATOM 166 C TYR P 26 -10.002 -0.077 20.642 1.00 -0.25 \ ATOM 167 O TYR P 26 -9.348 0.618 19.865 1.00 -0.25 \ ATOM 168 CB TYR P 26 -9.039 0.220 22.921 1.00 -0.25 \ ATOM 169 CG TYR P 26 -10.304 0.778 23.522 1.00 -0.25 \ ATOM 170 CD1 TYR P 26 -10.960 0.097 24.536 1.00 -0.25 \ ATOM 171 CD2 TYR P 26 -10.863 1.962 23.057 1.00 -0.25 \ ATOM 172 CE1 TYR P 26 -12.125 0.582 25.086 1.00 -0.25 \ ATOM 173 CE2 TYR P 26 -12.033 2.458 23.600 1.00 -0.25 \ ATOM 174 CZ TYR P 26 -12.658 1.762 24.617 1.00 -0.25 \ ATOM 175 OH TYR P 26 -13.827 2.236 25.175 1.00 -0.25 \ ATOM 176 N THR P 27 -11.309 -0.270 20.521 1.00 -0.98 \ ATOM 177 CA THR P 27 -12.103 0.396 19.498 1.00 -0.98 \ ATOM 178 C THR P 27 -13.510 0.644 20.032 1.00 -0.98 \ ATOM 179 O THR P 27 -13.864 0.162 21.107 1.00 -0.98 \ ATOM 180 CB THR P 27 -12.166 -0.426 18.201 1.00 -0.98 \ ATOM 181 OG1 THR P 27 -12.349 -1.810 18.522 1.00 -0.98 \ ATOM 182 CG2 THR P 27 -10.875 -0.270 17.413 1.00 -0.98 \ """, "e5uu3P1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5uu3P1_csv", state=0, origin=1) cmd.zoom("e5uu3P1_csv", animate=-1)