cmd.read_pdbstr("""\ ATOM 1 N VAL R 2 11.202 15.093 27.380 1.00 -1.00 \ ATOM 2 CA VAL R 2 9.949 14.347 27.395 1.00 -1.00 \ ATOM 3 C VAL R 2 9.368 14.291 28.804 1.00 -1.00 \ ATOM 4 O VAL R 2 8.151 14.245 28.982 1.00 -1.00 \ ATOM 5 CB VAL R 2 10.137 12.912 26.863 1.00 -1.00 \ ATOM 6 CG1 VAL R 2 8.886 12.080 27.114 1.00 -1.00 \ ATOM 7 CG2 VAL R 2 10.475 12.940 25.381 1.00 -1.00 \ ATOM 8 N ASN R 3 10.244 14.292 29.804 1.00 -0.47 \ ATOM 9 CA ASN R 3 9.809 14.286 31.193 1.00 -0.47 \ ATOM 10 C ASN R 3 9.036 15.558 31.523 1.00 -0.47 \ ATOM 11 O ASN R 3 8.114 15.542 32.337 1.00 -0.47 \ ATOM 12 CB ASN R 3 11.007 14.133 32.134 1.00 -0.47 \ ATOM 13 N GLN R 4 9.423 16.659 30.886 1.00 0.23 \ ATOM 14 CA GLN R 4 8.743 17.937 31.074 1.00 0.23 \ ATOM 15 C GLN R 4 7.335 17.875 30.495 1.00 0.23 \ ATOM 16 O GLN R 4 6.394 18.435 31.056 1.00 0.23 \ ATOM 17 CB GLN R 4 9.537 19.076 30.429 1.00 0.23 \ ATOM 18 N HIS R 5 7.199 17.187 29.367 1.00 -0.04 \ ATOM 19 CA HIS R 5 5.902 17.028 28.723 1.00 -0.04 \ ATOM 20 C HIS R 5 4.954 16.241 29.627 1.00 -0.04 \ ATOM 21 O HIS R 5 3.773 16.567 29.731 1.00 -0.04 \ ATOM 22 CB HIS R 5 6.052 16.322 27.374 1.00 -0.04 \ ATOM 23 CG HIS R 5 4.769 16.195 26.616 1.00 -0.04 \ ATOM 24 ND1 HIS R 5 4.025 17.286 26.223 1.00 -0.04 \ ATOM 25 CD2 HIS R 5 4.088 15.102 26.192 1.00 -0.04 \ ATOM 26 CE1 HIS R 5 2.947 16.873 25.580 1.00 -0.04 \ ATOM 27 NE2 HIS R 5 2.962 15.552 25.549 1.00 -0.04 \ ATOM 28 N LEU R 6 5.480 15.204 30.275 1.00 1.14 \ ATOM 29 CA LEU R 6 4.697 14.396 31.205 1.00 1.14 \ ATOM 30 C LEU R 6 4.350 15.203 32.448 1.00 1.14 \ ATOM 31 O LEU R 6 3.213 15.182 32.915 1.00 1.14 \ ATOM 32 CB LEU R 6 5.455 13.125 31.597 1.00 1.14 \ ATOM 33 CG LEU R 6 5.794 12.147 30.469 1.00 1.14 \ ATOM 34 CD1 LEU R 6 6.490 10.911 31.024 1.00 1.14 \ ATOM 35 CD2 LEU R 6 4.544 11.753 29.689 1.00 1.14 \ ATOM 36 N CYS R 7 5.346 15.895 32.989 1.00 1.71 \ ATOM 37 CA CYS R 7 5.149 16.773 34.135 1.00 1.71 \ ATOM 38 C CYS R 7 4.094 17.840 33.841 1.00 1.71 \ ATOM 39 O CYS R 7 3.261 18.154 34.691 1.00 1.71 \ ATOM 40 CB CYS R 7 6.474 17.431 34.529 1.00 1.71 \ ATOM 41 SG CYS R 7 6.356 18.678 35.833 1.00 1.71 \ ATOM 42 N GLY R 8 4.138 18.391 32.631 1.00 0.69 \ ATOM 43 CA GLY R 8 3.180 19.399 32.212 1.00 0.69 \ ATOM 44 C GLY R 8 1.750 18.900 32.288 1.00 0.69 \ ATOM 45 O GLY R 8 0.847 19.635 32.685 1.00 0.69 \ ATOM 46 N SER R 9 1.552 17.639 31.911 1.00 -0.48 \ ATOM 47 CA SER R 9 0.241 17.005 31.975 1.00 -0.48 \ ATOM 48 C SER R 9 -0.299 16.993 33.402 1.00 -0.48 \ ATOM 49 O SER R 9 -1.475 17.269 33.633 1.00 -0.48 \ ATOM 50 CB SER R 9 0.319 15.573 31.432 1.00 -0.48 \ ATOM 51 OG SER R 9 -0.895 14.875 31.646 1.00 -0.48 \ ATOM 52 N HIS R 10 0.571 16.670 34.353 1.00 -0.23 \ ATOM 53 CA HIS R 10 0.201 16.653 35.766 1.00 -0.23 \ ATOM 54 C HIS R 10 -0.008 18.068 36.313 1.00 -0.23 \ ATOM 55 O HIS R 10 -0.881 18.298 37.146 1.00 -0.23 \ ATOM 56 CB HIS R 10 1.269 15.923 36.591 1.00 -0.23 \ ATOM 57 CG HIS R 10 1.314 14.443 36.362 1.00 -0.23 \ ATOM 58 ND1 HIS R 10 0.518 13.557 37.058 1.00 -0.23 \ ATOM 59 CD2 HIS R 10 2.056 13.695 35.513 1.00 -0.23 \ ATOM 60 CE1 HIS R 10 0.778 12.326 36.657 1.00 -0.23 \ ATOM 61 NE2 HIS R 10 1.707 12.378 35.722 1.00 -0.23 \ ATOM 62 N LEU R 11 0.790 19.015 35.836 1.00 1.71 \ ATOM 63 CA LEU R 11 0.679 20.389 36.310 1.00 1.71 \ ATOM 64 C LEU R 11 -0.700 20.983 36.005 1.00 1.71 \ ATOM 65 O LEU R 11 -1.308 21.618 36.868 1.00 1.71 \ ATOM 66 CB LEU R 11 1.784 21.251 35.699 1.00 1.71 \ ATOM 67 N VAL R 12 -1.199 20.764 34.788 1.00 0.69 \ ATOM 68 CA VAL R 12 -2.493 21.322 34.391 1.00 0.69 \ ATOM 69 C VAL R 12 -3.643 20.672 35.158 1.00 0.69 \ ATOM 70 O VAL R 12 -4.643 21.329 35.447 1.00 0.69 \ ATOM 71 CB VAL R 12 -2.755 21.190 32.870 1.00 0.69 \ ATOM 72 CG1 VAL R 12 -1.829 22.108 32.082 1.00 0.69 \ ATOM 73 CG2 VAL R 12 -2.614 19.754 32.416 1.00 0.69 \ ATOM 74 N GLU R 13 -3.511 19.385 35.477 1.00 0.66 \ ATOM 75 CA GLU R 13 -4.511 18.715 36.306 1.00 0.66 \ ATOM 76 C GLU R 13 -4.577 19.366 37.683 1.00 0.66 \ ATOM 77 O GLU R 13 -5.657 19.595 38.224 1.00 0.66 \ ATOM 78 CB GLU R 13 -4.202 17.219 36.451 1.00 0.66 \ ATOM 79 CG GLU R 13 -4.542 16.372 35.233 1.00 0.66 \ ATOM 80 CD GLU R 13 -5.989 15.893 35.236 1.00 0.66 \ ATOM 81 OE1 GLU R 13 -6.263 14.816 35.817 1.00 0.66 \ ATOM 82 OE2 GLU R 13 -6.851 16.595 34.661 1.00 0.66 \ ATOM 83 N ALA R 14 -3.409 19.665 38.238 1.00 -0.03 \ ATOM 84 CA ALA R 14 -3.312 20.303 39.544 1.00 -0.03 \ ATOM 85 C ALA R 14 -3.877 21.718 39.497 1.00 -0.03 \ ATOM 86 O ALA R 14 -4.609 22.133 40.397 1.00 -0.03 \ ATOM 87 CB ALA R 14 -1.871 20.321 40.019 1.00 -0.03 \ ATOM 88 N LEU R 15 -3.529 22.450 38.440 1.00 1.71 \ ATOM 89 CA LEU R 15 -4.010 23.813 38.242 1.00 1.71 \ ATOM 90 C LEU R 15 -5.529 23.856 38.131 1.00 1.71 \ ATOM 91 O LEU R 15 -6.173 24.781 38.629 1.00 1.71 \ ATOM 92 CB LEU R 15 -3.378 24.425 36.986 1.00 1.71 \ ATOM 93 CG LEU R 15 -1.892 24.775 37.076 1.00 1.71 \ ATOM 94 CD1 LEU R 15 -1.345 25.152 35.714 1.00 1.71 \ ATOM 95 CD2 LEU R 15 -1.678 25.915 38.062 1.00 1.71 \ ATOM 96 N TYR R 16 -6.092 22.847 37.474 1.00 -0.22 \ ATOM 97 CA TYR R 16 -7.535 22.755 37.294 1.00 -0.22 \ ATOM 98 C TYR R 16 -8.265 22.659 38.636 1.00 -0.22 \ ATOM 99 O TYR R 16 -9.319 23.266 38.825 1.00 -0.22 \ ATOM 100 CB TYR R 16 -7.877 21.549 36.415 1.00 -0.22 \ ATOM 101 CG TYR R 16 -9.358 21.302 36.260 1.00 -0.22 \ ATOM 102 CD1 TYR R 16 -10.119 22.055 35.377 1.00 -0.22 \ ATOM 103 CD2 TYR R 16 -9.997 20.318 37.002 1.00 -0.22 \ ATOM 104 CE1 TYR R 16 -11.471 21.832 35.234 1.00 -0.22 \ ATOM 105 CE2 TYR R 16 -11.349 20.091 36.867 1.00 -0.22 \ ATOM 106 CZ TYR R 16 -12.081 20.849 35.983 1.00 -0.22 \ ATOM 107 OH TYR R 16 -13.430 20.625 35.847 1.00 -0.22 \ ATOM 108 N LEU R 17 -7.688 21.898 39.563 1.00 -0.23 \ ATOM 109 CA LEU R 17 -8.280 21.691 40.882 1.00 -0.23 \ ATOM 110 C LEU R 17 -8.093 22.892 41.812 1.00 -0.23 \ ATOM 111 O LEU R 17 -9.038 23.336 42.465 1.00 -0.23 \ ATOM 112 CB LEU R 17 -7.688 20.437 41.540 1.00 -0.23 \ ATOM 113 CG LEU R 17 -7.991 19.078 40.898 1.00 -0.23 \ ATOM 114 CD1 LEU R 17 -7.218 17.959 41.589 1.00 -0.23 \ ATOM 115 CD2 LEU R 17 -9.487 18.785 40.914 1.00 -0.23 \ ATOM 116 N VAL R 18 -6.874 23.417 41.856 1.00 0.24 \ ATOM 117 CA VAL R 18 -6.526 24.474 42.799 1.00 0.24 \ ATOM 118 C VAL R 18 -7.203 25.803 42.480 1.00 0.24 \ ATOM 119 O VAL R 18 -7.688 26.490 43.376 1.00 0.24 \ ATOM 120 CB VAL R 18 -5.001 24.701 42.838 1.00 0.24 \ ATOM 121 CG1 VAL R 18 -4.665 25.918 43.686 1.00 0.24 \ ATOM 122 CG2 VAL R 18 -4.294 23.463 43.367 1.00 0.24 \ ATOM 123 N CYS R 19 -7.239 26.157 41.202 1.00 1.71 \ ATOM 124 CA CYS R 19 -7.728 27.465 40.781 1.00 1.71 \ ATOM 125 C CYS R 19 -9.251 27.566 40.830 1.00 1.71 \ ATOM 126 O CYS R 19 -9.803 28.657 40.970 1.00 1.71 \ ATOM 127 CB CYS R 19 -7.212 27.781 39.382 1.00 1.71 \ ATOM 128 SG CYS R 19 -5.413 27.914 39.329 1.00 1.71 \ ATOM 129 N GLY R 20 -9.919 26.422 40.719 1.00 -0.18 \ ATOM 130 CA GLY R 20 -11.368 26.356 40.813 1.00 -0.18 \ ATOM 131 C GLY R 20 -12.130 27.265 39.867 1.00 -0.18 \ ATOM 132 O GLY R 20 -11.962 27.192 38.650 1.00 -0.18 \ ATOM 133 N GLU R 21 -12.970 28.129 40.431 1.00 0.19 \ ATOM 134 CA GLU R 21 -13.839 28.982 39.629 1.00 0.19 \ ATOM 135 C GLU R 21 -13.048 30.038 38.868 1.00 0.19 \ ATOM 136 O GLU R 21 -13.458 30.476 37.794 1.00 0.19 \ ATOM 137 CB GLU R 21 -14.889 29.656 40.515 1.00 0.19 \ ATOM 138 N ARG R 22 -11.908 30.434 39.425 1.00 -0.63 \ ATOM 139 CA ARG R 22 -11.063 31.447 38.807 1.00 -0.63 \ ATOM 140 C ARG R 22 -10.519 30.987 37.462 1.00 -0.63 \ ATOM 141 O ARG R 22 -10.207 31.802 36.596 1.00 -0.63 \ ATOM 142 CB ARG R 22 -9.907 31.826 39.732 1.00 -0.63 \ ATOM 143 CG ARG R 22 -10.345 32.370 41.078 1.00 -0.63 \ ATOM 144 CD ARG R 22 -9.162 32.939 41.834 1.00 -0.63 \ ATOM 145 NE ARG R 22 -8.412 31.895 42.525 1.00 -0.63 \ ATOM 146 CZ ARG R 22 -7.260 32.097 43.154 1.00 -0.63 \ ATOM 147 NH1 ARG R 22 -6.720 33.310 43.185 1.00 -0.63 \ ATOM 148 NH2 ARG R 22 -6.649 31.086 43.754 1.00 -0.63 \ ATOM 149 N GLY R 23 -10.390 29.678 37.293 1.00 1.71 \ ATOM 150 CA GLY R 23 -9.796 29.146 36.084 1.00 1.71 \ ATOM 151 C GLY R 23 -8.304 29.382 36.133 1.00 1.71 \ ATOM 152 O GLY R 23 -7.770 29.792 37.161 1.00 1.71 \ ATOM 153 N PHE R 24 -7.620 29.125 35.029 1.00 1.12 \ ATOM 154 CA PHE R 24 -6.172 29.274 35.007 1.00 1.12 \ ATOM 155 C PHE R 24 -5.660 29.396 33.585 1.00 1.12 \ ATOM 156 O PHE R 24 -6.403 29.218 32.624 1.00 1.12 \ ATOM 157 CB PHE R 24 -5.493 28.087 35.698 1.00 1.12 \ ATOM 158 CG PHE R 24 -5.638 26.790 34.954 1.00 1.12 \ ATOM 159 CD1 PHE R 24 -6.778 26.020 35.094 1.00 1.12 \ ATOM 160 CD2 PHE R 24 -4.635 26.348 34.104 1.00 1.12 \ ATOM 161 CE1 PHE R 24 -6.915 24.827 34.406 1.00 1.12 \ ATOM 162 CE2 PHE R 24 -4.767 25.162 33.411 1.00 1.12 \ ATOM 163 CZ PHE R 24 -5.907 24.399 33.560 1.00 1.12 \ ATOM 164 N PHE R 25 -4.376 29.692 33.466 1.00 0.52 \ ATOM 165 CA PHE R 25 -3.732 29.823 32.173 1.00 0.52 \ ATOM 166 C PHE R 25 -2.558 28.874 32.063 1.00 0.52 \ ATOM 167 O PHE R 25 -1.850 28.643 33.042 1.00 0.52 \ ATOM 168 CB PHE R 25 -3.263 31.260 31.958 1.00 0.52 \ ATOM 169 CG PHE R 25 -2.444 31.809 33.099 1.00 0.52 \ ATOM 170 CD1 PHE R 25 -1.080 31.578 33.167 1.00 0.52 \ ATOM 171 CD2 PHE R 25 -3.037 32.552 34.098 1.00 0.52 \ ATOM 172 CE1 PHE R 25 -0.325 32.082 34.205 1.00 0.52 \ ATOM 173 CE2 PHE R 25 -2.284 33.061 35.143 1.00 0.52 \ ATOM 174 CZ PHE R 25 -0.927 32.822 35.196 1.00 0.52 \ ATOM 175 N TYR R 26 -2.348 28.319 30.875 1.00 -0.25 \ ATOM 176 CA TYR R 26 -1.174 27.490 30.668 1.00 -0.25 \ ATOM 177 C TYR R 26 -0.495 27.729 29.327 1.00 -0.25 \ ATOM 178 O TYR R 26 -1.130 27.716 28.273 1.00 -0.25 \ ATOM 179 CB TYR R 26 -1.518 26.008 30.792 1.00 -0.25 \ ATOM 180 CG TYR R 26 -0.274 25.160 30.800 1.00 -0.25 \ ATOM 181 CD1 TYR R 26 0.429 24.944 31.975 1.00 -0.25 \ ATOM 182 CD2 TYR R 26 0.224 24.610 29.627 1.00 -0.25 \ ATOM 183 CE1 TYR R 26 1.579 24.185 31.987 1.00 -0.25 \ ATOM 184 CE2 TYR R 26 1.373 23.849 29.629 1.00 -0.25 \ ATOM 185 CZ TYR R 26 2.047 23.638 30.812 1.00 -0.25 \ ATOM 186 OH TYR R 26 3.197 22.880 30.823 1.00 -0.25 \ ATOM 187 N THR R 27 0.818 27.908 29.392 1.00 -0.98 \ ATOM 188 CA THR R 27 1.643 28.096 28.213 1.00 -0.98 \ ATOM 189 C THR R 27 3.000 27.457 28.474 1.00 -0.98 \ ATOM 190 O THR R 27 3.498 27.473 29.600 1.00 -0.98 \ ATOM 191 CB THR R 27 1.817 29.588 27.862 1.00 -0.98 \ """, "e5uu3R1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5uu3R1_csv", state=0, origin=1) cmd.zoom("e5uu3R1_csv", animate=-1)