cmd.read_pdbstr("""\ ATOM 1 N PHE T 1 -22.731 21.322 37.667 1.00 -1.00 \ ATOM 2 CA PHE T 1 -22.952 19.881 37.668 1.00 -1.00 \ ATOM 3 C PHE T 1 -21.672 19.132 38.023 1.00 -1.00 \ ATOM 4 O PHE T 1 -20.575 19.542 37.642 1.00 -1.00 \ ATOM 5 CB PHE T 1 -23.475 19.418 36.307 1.00 -1.00 \ ATOM 6 N VAL T 2 -21.820 18.040 38.765 1.00 -1.00 \ ATOM 7 CA VAL T 2 -20.684 17.204 39.138 1.00 -1.00 \ ATOM 8 C VAL T 2 -20.057 16.541 37.913 1.00 -1.00 \ ATOM 9 O VAL T 2 -18.834 16.411 37.818 1.00 -1.00 \ ATOM 10 CB VAL T 2 -21.097 16.116 40.145 1.00 -1.00 \ ATOM 11 CG1 VAL T 2 -19.980 15.102 40.322 1.00 -1.00 \ ATOM 12 CG2 VAL T 2 -21.476 16.747 41.476 1.00 -1.00 \ ATOM 13 N ASN T 3 -20.904 16.117 36.981 1.00 -0.47 \ ATOM 14 CA ASN T 3 -20.435 15.504 35.747 1.00 -0.47 \ ATOM 15 C ASN T 3 -19.622 16.485 34.914 1.00 -0.47 \ ATOM 16 O ASN T 3 -18.676 16.098 34.231 1.00 -0.47 \ ATOM 17 CB ASN T 3 -21.615 14.974 34.930 1.00 -0.47 \ ATOM 18 N GLN T 4 -19.990 17.759 34.983 1.00 0.23 \ ATOM 19 CA GLN T 4 -19.274 18.797 34.255 1.00 0.23 \ ATOM 20 C GLN T 4 -17.869 18.960 34.817 1.00 0.23 \ ATOM 21 O GLN T 4 -16.912 19.174 34.074 1.00 0.23 \ ATOM 22 CB GLN T 4 -20.030 20.126 34.318 1.00 0.23 \ ATOM 23 N HIS T 5 -17.753 18.847 36.136 1.00 -0.04 \ ATOM 24 CA HIS T 5 -16.465 18.975 36.804 1.00 -0.04 \ ATOM 25 C HIS T 5 -15.493 17.860 36.396 1.00 -0.04 \ ATOM 26 O HIS T 5 -14.308 18.109 36.186 1.00 -0.04 \ ATOM 27 CB HIS T 5 -16.657 18.979 38.322 1.00 -0.04 \ ATOM 28 CG HIS T 5 -15.391 19.189 39.088 1.00 -0.04 \ ATOM 29 ND1 HIS T 5 -14.611 20.317 38.941 1.00 -0.04 \ ATOM 30 CD2 HIS T 5 -14.759 18.412 40.000 1.00 -0.04 \ ATOM 31 CE1 HIS T 5 -13.558 20.228 39.733 1.00 -0.04 \ ATOM 32 NE2 HIS T 5 -13.623 19.081 40.385 1.00 -0.04 \ ATOM 33 N LEU T 6 -15.998 16.635 36.286 1.00 1.14 \ ATOM 34 CA LEU T 6 -15.169 15.505 35.869 1.00 1.14 \ ATOM 35 C LEU T 6 -14.763 15.662 34.413 1.00 1.14 \ ATOM 36 O LEU T 6 -13.596 15.493 34.062 1.00 1.14 \ ATOM 37 CB LEU T 6 -15.910 14.183 36.076 1.00 1.14 \ ATOM 38 CG LEU T 6 -16.305 13.849 37.515 1.00 1.14 \ ATOM 39 CD1 LEU T 6 -16.969 12.482 37.590 1.00 1.14 \ ATOM 40 CD2 LEU T 6 -15.095 13.903 38.434 1.00 1.14 \ ATOM 41 N CYS T 7 -15.735 16.002 33.573 1.00 1.71 \ ATOM 42 CA CYS T 7 -15.495 16.250 32.157 1.00 1.71 \ ATOM 43 C CYS T 7 -14.437 17.338 31.956 1.00 1.71 \ ATOM 44 O CYS T 7 -13.582 17.227 31.079 1.00 1.71 \ ATOM 45 CB CYS T 7 -16.805 16.645 31.465 1.00 1.71 \ ATOM 46 SG CYS T 7 -16.648 17.145 29.727 1.00 1.71 \ ATOM 47 N GLY T 8 -14.504 18.386 32.774 1.00 0.69 \ ATOM 48 CA GLY T 8 -13.547 19.475 32.705 1.00 0.69 \ ATOM 49 C GLY T 8 -12.120 19.011 32.906 1.00 0.69 \ ATOM 50 O GLY T 8 -11.201 19.496 32.248 1.00 0.69 \ ATOM 51 N SER T 9 -11.935 18.070 33.826 1.00 -0.48 \ ATOM 52 CA SER T 9 -10.620 17.491 34.079 1.00 -0.48 \ ATOM 53 C SER T 9 -10.077 16.828 32.820 1.00 -0.48 \ ATOM 54 O SER T 9 -8.891 16.943 32.511 1.00 -0.48 \ ATOM 55 CB SER T 9 -10.678 16.479 35.222 1.00 -0.48 \ ATOM 56 OG SER T 9 -9.439 15.800 35.347 1.00 -0.48 \ ATOM 57 N HIS T 10 -10.946 16.117 32.108 1.00 -0.23 \ ATOM 58 CA HIS T 10 -10.548 15.473 30.858 1.00 -0.23 \ ATOM 59 C HIS T 10 -10.330 16.494 29.741 1.00 -0.23 \ ATOM 60 O HIS T 10 -9.423 16.340 28.926 1.00 -0.23 \ ATOM 61 CB HIS T 10 -11.593 14.443 30.431 1.00 -0.23 \ ATOM 62 CG HIS T 10 -11.632 13.230 31.304 1.00 -0.23 \ ATOM 63 ND1 HIS T 10 -10.797 12.151 31.113 1.00 -0.23 \ ATOM 64 CD2 HIS T 10 -12.401 12.928 32.375 1.00 -0.23 \ ATOM 65 CE1 HIS T 10 -11.049 11.237 32.028 1.00 -0.23 \ ATOM 66 NE2 HIS T 10 -12.019 11.680 32.805 1.00 -0.23 \ ATOM 67 N LEU T 11 -11.149 17.539 29.720 1.00 1.71 \ ATOM 68 CA LEU T 11 -11.023 18.582 28.705 1.00 1.71 \ ATOM 69 C LEU T 11 -9.667 19.266 28.796 1.00 1.71 \ ATOM 70 O LEU T 11 -9.017 19.516 27.777 1.00 1.71 \ ATOM 71 CB LEU T 11 -12.142 19.615 28.837 1.00 1.71 \ ATOM 72 CG LEU T 11 -13.482 19.254 28.197 1.00 1.71 \ ATOM 73 CD1 LEU T 11 -14.496 20.368 28.402 1.00 1.71 \ ATOM 74 CD2 LEU T 11 -13.281 18.977 26.713 1.00 1.71 \ ATOM 75 N VAL T 12 -9.240 19.562 30.020 1.00 0.69 \ ATOM 76 CA VAL T 12 -7.976 20.259 30.223 1.00 0.69 \ ATOM 77 C VAL T 12 -6.810 19.375 29.809 1.00 0.69 \ ATOM 78 O VAL T 12 -5.827 19.855 29.241 1.00 0.69 \ ATOM 79 CB VAL T 12 -7.800 20.698 31.694 1.00 0.69 \ ATOM 80 CG1 VAL T 12 -6.326 20.854 32.036 1.00 0.69 \ ATOM 81 CG2 VAL T 12 -8.576 22.000 31.966 1.00 0.69 \ ATOM 82 N GLU T 13 -6.936 18.076 30.063 1.00 0.66 \ ATOM 83 CA GLU T 13 -5.929 17.127 29.619 1.00 0.66 \ ATOM 84 C GLU T 13 -5.861 17.119 28.094 1.00 0.66 \ ATOM 85 O GLU T 13 -4.777 17.132 27.511 1.00 0.66 \ ATOM 86 CB GLU T 13 -6.238 15.726 30.152 1.00 0.66 \ ATOM 87 N ALA T 14 -7.029 17.134 27.460 1.00 -0.03 \ ATOM 88 CA ALA T 14 -7.123 17.121 26.004 1.00 -0.03 \ ATOM 89 C ALA T 14 -6.555 18.395 25.378 1.00 -0.03 \ ATOM 90 O ALA T 14 -5.807 18.330 24.402 1.00 -0.03 \ ATOM 91 CB ALA T 14 -8.578 16.929 25.574 1.00 -0.03 \ ATOM 92 N LEU T 15 -6.906 19.550 25.942 1.00 1.71 \ ATOM 93 CA LEU T 15 -6.394 20.822 25.439 1.00 1.71 \ ATOM 94 C LEU T 15 -4.878 20.870 25.544 1.00 1.71 \ ATOM 95 O LEU T 15 -4.204 21.426 24.672 1.00 1.71 \ ATOM 96 CB LEU T 15 -7.011 22.003 26.196 1.00 1.71 \ ATOM 97 CG LEU T 15 -8.484 22.300 25.913 1.00 1.71 \ ATOM 98 CD1 LEU T 15 -9.028 23.355 26.871 1.00 1.71 \ ATOM 99 CD2 LEU T 15 -8.666 22.739 24.466 1.00 1.71 \ ATOM 100 N TYR T 16 -4.346 20.286 26.612 1.00 -0.22 \ ATOM 101 CA TYR T 16 -2.906 20.262 26.826 1.00 -0.22 \ ATOM 102 C TYR T 16 -2.179 19.544 25.695 1.00 -0.22 \ ATOM 103 O TYR T 16 -1.127 19.989 25.245 1.00 -0.22 \ ATOM 104 CB TYR T 16 -2.578 19.590 28.161 1.00 -0.22 \ ATOM 105 CG TYR T 16 -1.097 19.409 28.406 1.00 -0.22 \ ATOM 106 CD1 TYR T 16 -0.311 20.469 28.832 1.00 -0.22 \ ATOM 107 CD2 TYR T 16 -0.483 18.174 28.203 1.00 -0.22 \ ATOM 108 CE1 TYR T 16 1.039 20.310 29.053 1.00 -0.22 \ ATOM 109 CE2 TYR T 16 0.869 18.005 28.420 1.00 -0.22 \ ATOM 110 CZ TYR T 16 1.625 19.078 28.845 1.00 -0.22 \ ATOM 111 OH TYR T 16 2.973 18.928 29.074 1.00 -0.22 \ ATOM 112 N LEU T 17 -2.754 18.442 25.230 1.00 -0.23 \ ATOM 113 CA LEU T 17 -2.149 17.657 24.163 1.00 -0.23 \ ATOM 114 C LEU T 17 -2.337 18.312 22.802 1.00 -0.23 \ ATOM 115 O LEU T 17 -1.399 18.429 22.014 1.00 -0.23 \ ATOM 116 CB LEU T 17 -2.752 16.252 24.134 1.00 -0.23 \ ATOM 117 CG LEU T 17 -2.300 15.341 22.992 1.00 -0.23 \ ATOM 118 CD1 LEU T 17 -0.878 14.844 23.235 1.00 -0.23 \ ATOM 119 CD2 LEU T 17 -3.269 14.179 22.807 1.00 -0.23 \ ATOM 120 N VAL T 18 -3.566 18.733 22.540 1.00 0.24 \ ATOM 121 CA VAL T 18 -3.946 19.263 21.245 1.00 0.24 \ ATOM 122 C VAL T 18 -3.336 20.637 20.966 1.00 0.24 \ ATOM 123 O VAL T 18 -2.871 20.899 19.860 1.00 0.24 \ ATOM 124 CB VAL T 18 -5.468 19.354 21.130 1.00 0.24 \ ATOM 125 CG1 VAL T 18 -5.854 20.025 19.835 1.00 0.24 \ ATOM 126 CG2 VAL T 18 -6.074 17.958 21.210 1.00 0.24 \ ATOM 127 N CYS T 19 -3.321 21.504 21.971 1.00 1.71 \ ATOM 128 CA CYS T 19 -2.891 22.884 21.768 1.00 1.71 \ ATOM 129 C CYS T 19 -1.380 22.997 21.612 1.00 1.71 \ ATOM 130 O CYS T 19 -0.884 23.943 20.993 1.00 1.71 \ ATOM 131 CB CYS T 19 -3.369 23.767 22.919 1.00 1.71 \ ATOM 132 SG CYS T 19 -5.163 23.900 23.023 1.00 1.71 \ ATOM 133 N GLY T 20 -0.652 22.042 22.180 1.00 -0.18 \ ATOM 134 CA GLY T 20 0.790 21.990 22.025 1.00 -0.18 \ ATOM 135 C GLY T 20 1.514 23.273 22.384 1.00 -0.18 \ ATOM 136 O GLY T 20 1.421 23.763 23.508 1.00 -0.18 \ ATOM 137 N GLU T 21 2.244 23.810 21.412 1.00 0.19 \ ATOM 138 CA GLU T 21 3.076 24.987 21.627 1.00 0.19 \ ATOM 139 C GLU T 21 2.258 26.255 21.855 1.00 0.19 \ ATOM 140 O GLU T 21 2.715 27.183 22.523 1.00 0.19 \ ATOM 141 CB GLU T 21 4.021 25.187 20.441 1.00 0.19 \ ATOM 142 N ARG T 22 1.054 26.298 21.293 1.00 -0.63 \ ATOM 143 CA ARG T 22 0.195 27.473 21.422 1.00 -0.63 \ ATOM 144 C ARG T 22 -0.246 27.748 22.861 1.00 -0.63 \ ATOM 145 O ARG T 22 -0.459 28.899 23.240 1.00 -0.63 \ ATOM 146 CB ARG T 22 -1.039 27.324 20.526 1.00 -0.63 \ ATOM 147 N GLY T 23 -0.365 26.695 23.664 1.00 1.71 \ ATOM 148 CA GLY T 23 -0.868 26.831 25.020 1.00 1.71 \ ATOM 149 C GLY T 23 -2.363 27.091 25.009 1.00 1.71 \ ATOM 150 O GLY T 23 -2.994 27.010 23.956 1.00 1.71 \ ATOM 151 N PHE T 24 -2.944 27.381 26.170 1.00 1.12 \ ATOM 152 CA PHE T 24 -4.380 27.627 26.235 1.00 1.12 \ ATOM 153 C PHE T 24 -4.827 28.311 27.526 1.00 1.12 \ ATOM 154 O PHE T 24 -4.057 28.448 28.475 1.00 1.12 \ ATOM 155 CB PHE T 24 -5.140 26.310 26.067 1.00 1.12 \ ATOM 156 CG PHE T 24 -4.960 25.353 27.215 1.00 1.12 \ ATOM 157 CD1 PHE T 24 -3.844 24.537 27.287 1.00 1.12 \ ATOM 158 CD2 PHE T 24 -5.918 25.259 28.213 1.00 1.12 \ ATOM 159 CE1 PHE T 24 -3.682 23.649 28.347 1.00 1.12 \ ATOM 160 CE2 PHE T 24 -5.764 24.378 29.270 1.00 1.12 \ ATOM 161 CZ PHE T 24 -4.647 23.574 29.339 1.00 1.12 \ ATOM 162 N PHE T 25 -6.093 28.715 27.548 1.00 0.52 \ ATOM 163 CA PHE T 25 -6.714 29.300 28.724 1.00 0.52 \ ATOM 164 C PHE T 25 -7.919 28.443 29.087 1.00 0.52 \ ATOM 165 O PHE T 25 -8.631 27.960 28.207 1.00 0.52 \ ATOM 166 CB PHE T 25 -7.160 30.746 28.472 1.00 0.52 \ ATOM 167 CG PHE T 25 -6.123 31.788 28.810 1.00 0.52 \ ATOM 168 CD1 PHE T 25 -4.772 31.491 28.770 1.00 0.52 \ ATOM 169 CD2 PHE T 25 -6.510 33.071 29.159 1.00 0.52 \ ATOM 170 CE1 PHE T 25 -3.826 32.457 29.076 1.00 0.52 \ ATOM 171 CE2 PHE T 25 -5.570 34.041 29.469 1.00 0.52 \ ATOM 172 CZ PHE T 25 -4.227 33.734 29.427 1.00 0.52 \ ATOM 173 N TYR T 26 -8.154 28.258 30.380 1.00 -0.25 \ ATOM 174 CA TYR T 26 -9.341 27.547 30.826 1.00 -0.25 \ ATOM 175 C TYR T 26 -9.982 28.221 32.030 1.00 -0.25 \ ATOM 176 O TYR T 26 -9.306 28.555 33.002 1.00 -0.25 \ ATOM 177 CB TYR T 26 -9.019 26.094 31.169 1.00 -0.25 \ ATOM 178 CG TYR T 26 -10.266 25.287 31.434 1.00 -0.25 \ ATOM 179 CD1 TYR T 26 -10.824 25.233 32.704 1.00 -0.25 \ ATOM 180 CD2 TYR T 26 -10.905 24.606 30.408 1.00 -0.25 \ ATOM 181 CE1 TYR T 26 -11.973 24.514 32.949 1.00 -0.25 \ ATOM 182 CE2 TYR T 26 -12.055 23.879 30.643 1.00 -0.25 \ ATOM 183 CZ TYR T 26 -12.585 23.836 31.915 1.00 -0.25 \ ATOM 184 OH TYR T 26 -13.731 23.111 32.151 1.00 -0.25 \ ATOM 185 N THR T 27 -11.294 28.415 31.953 1.00 -0.98 \ ATOM 186 CA THR T 27 -12.058 28.989 33.052 1.00 -0.98 \ ATOM 187 C THR T 27 -13.466 28.401 33.074 1.00 -0.98 \ ATOM 188 O THR T 27 -14.219 28.531 32.109 1.00 -0.98 \ ATOM 189 CB THR T 27 -12.141 30.522 32.949 1.00 -0.98 \ """, "e5uu3T1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5uu3T1_csv", state=0, origin=1) cmd.zoom("e5uu3T1_csv", animate=-1)