cmd.read_pdbstr("""\ ATOM 1 N ASN D 3 -39.468 72.270 6.521 1.00 -0.47 \ ATOM 2 CA ASN D 3 -39.171 73.645 6.119 1.00 -0.47 \ ATOM 3 C ASN D 3 -40.451 74.369 5.800 1.00 -0.47 \ ATOM 4 O ASN D 3 -40.578 75.588 6.054 1.00 -0.47 \ ATOM 5 CB ASN D 3 -38.244 73.693 4.906 1.00 -0.47 \ ATOM 6 N GLN D 4 -41.380 73.581 5.246 1.00 0.23 \ ATOM 7 CA GLN D 4 -42.706 74.016 4.796 1.00 0.23 \ ATOM 8 C GLN D 4 -42.583 74.585 3.404 1.00 0.23 \ ATOM 9 O GLN D 4 -43.511 74.492 2.636 1.00 0.23 \ ATOM 10 CB GLN D 4 -43.353 75.043 5.744 1.00 0.23 \ ATOM 11 N HIS D 5 -41.427 75.147 3.055 1.00 -0.04 \ ATOM 12 CA HIS D 5 -41.201 75.674 1.691 1.00 -0.04 \ ATOM 13 C HIS D 5 -41.093 74.516 0.710 1.00 -0.04 \ ATOM 14 O HIS D 5 -41.417 74.636 -0.463 1.00 -0.04 \ ATOM 15 CB HIS D 5 -39.937 76.528 1.610 1.00 -0.04 \ ATOM 16 CG HIS D 5 -39.655 77.063 0.233 1.00 -0.04 \ ATOM 17 ND1 HIS D 5 -38.658 76.570 -0.575 1.00 -0.04 \ ATOM 18 CD2 HIS D 5 -40.270 78.042 -0.478 1.00 -0.04 \ ATOM 19 CE1 HIS D 5 -38.664 77.218 -1.733 1.00 -0.04 \ ATOM 20 NE2 HIS D 5 -39.624 78.124 -1.686 1.00 -0.04 \ ATOM 21 N LEU D 6 -40.544 73.419 1.211 1.00 1.14 \ ATOM 22 CA LEU D 6 -40.394 72.214 0.432 1.00 1.14 \ ATOM 23 C LEU D 6 -41.727 71.628 0.095 1.00 1.14 \ ATOM 24 O LEU D 6 -41.953 71.155 -1.003 1.00 1.14 \ ATOM 25 CB LEU D 6 -39.591 71.185 1.213 1.00 1.14 \ ATOM 26 CG LEU D 6 -38.238 71.685 1.680 1.00 1.14 \ ATOM 27 CD1 LEU D 6 -37.435 70.554 2.374 1.00 1.14 \ ATOM 28 CD2 LEU D 6 -37.501 72.255 0.511 1.00 1.14 \ ATOM 29 N CYS D 7 -42.619 71.609 1.040 1.00 1.71 \ ATOM 30 CA CYS D 7 -43.970 71.156 0.742 1.00 1.71 \ ATOM 31 C CYS D 7 -44.652 71.989 -0.355 1.00 1.71 \ ATOM 32 O CYS D 7 -45.322 71.479 -1.227 1.00 1.71 \ ATOM 33 CB CYS D 7 -44.784 71.205 2.022 1.00 1.71 \ ATOM 34 SG CYS D 7 -46.501 70.815 1.834 1.00 1.71 \ ATOM 35 N GLY D 8 -44.459 73.294 -0.311 1.00 0.69 \ ATOM 36 CA GLY D 8 -45.086 74.181 -1.271 1.00 0.69 \ ATOM 37 C GLY D 8 -44.688 73.749 -2.651 1.00 0.69 \ ATOM 38 O GLY D 8 -45.523 73.724 -3.548 1.00 0.69 \ ATOM 39 N SER D 9 -43.420 73.372 -2.819 1.00 -0.48 \ ATOM 40 CA SER D 9 -42.926 72.917 -4.119 1.00 -0.48 \ ATOM 41 C SER D 9 -43.680 71.671 -4.584 1.00 -0.48 \ ATOM 42 O SER D 9 -44.105 71.599 -5.726 1.00 -0.48 \ ATOM 43 CB SER D 9 -41.412 72.587 -4.062 1.00 -0.48 \ ATOM 44 OG SER D 9 -41.001 72.113 -5.335 1.00 -0.48 \ ATOM 45 N HIS D 10 -43.882 70.735 -3.668 1.00 -0.23 \ ATOM 46 CA HIS D 10 -44.581 69.486 -3.990 1.00 -0.23 \ ATOM 47 C HIS D 10 -46.082 69.797 -4.151 1.00 -0.23 \ ATOM 48 O HIS D 10 -46.732 69.324 -5.066 1.00 -0.23 \ ATOM 49 CB HIS D 10 -44.355 68.420 -2.908 1.00 -0.23 \ ATOM 50 CG HIS D 10 -42.959 67.840 -2.908 1.00 -0.23 \ ATOM 51 ND1 HIS D 10 -42.466 67.084 -3.944 1.00 -0.23 \ ATOM 52 CD2 HIS D 10 -41.975 67.898 -1.985 1.00 -0.23 \ ATOM 53 CE1 HIS D 10 -41.219 66.723 -3.679 1.00 -0.23 \ ATOM 54 NE2 HIS D 10 -40.904 67.183 -2.483 1.00 -0.23 \ ATOM 55 N LEU D 11 -46.579 70.716 -3.348 1.00 1.71 \ ATOM 56 CA LEU D 11 -47.998 71.132 -3.483 1.00 1.71 \ ATOM 57 C LEU D 11 -48.306 71.606 -4.899 1.00 1.71 \ ATOM 58 O LEU D 11 -49.233 71.093 -5.510 1.00 1.71 \ ATOM 59 CB LEU D 11 -48.383 72.213 -2.507 1.00 1.71 \ ATOM 60 CG LEU D 11 -48.860 71.901 -1.082 1.00 1.71 \ ATOM 61 CD1 LEU D 11 -49.229 73.172 -0.364 1.00 1.71 \ ATOM 62 CD2 LEU D 11 -50.001 70.920 -1.152 1.00 1.71 \ ATOM 63 N VAL D 12 -47.516 72.518 -5.458 1.00 0.69 \ ATOM 64 CA VAL D 12 -47.845 73.025 -6.786 1.00 0.69 \ ATOM 65 C VAL D 12 -47.690 71.994 -7.854 1.00 0.69 \ ATOM 66 O VAL D 12 -48.349 72.084 -8.931 1.00 0.69 \ ATOM 67 CB VAL D 12 -47.030 74.287 -7.224 1.00 0.69 \ ATOM 68 CG1 VAL D 12 -47.223 75.380 -6.187 1.00 0.69 \ ATOM 69 CG2 VAL D 12 -45.643 74.043 -7.378 1.00 0.69 \ ATOM 70 N GLU D 13 -46.799 71.042 -7.654 1.00 0.66 \ ATOM 71 CA GLU D 13 -46.675 70.074 -8.706 1.00 0.66 \ ATOM 72 C GLU D 13 -47.936 69.288 -8.763 1.00 0.66 \ ATOM 73 O GLU D 13 -48.477 69.011 -9.815 1.00 0.66 \ ATOM 74 CB GLU D 13 -45.530 69.132 -8.487 1.00 0.66 \ ATOM 75 CG GLU D 13 -45.372 68.246 -9.669 1.00 0.66 \ ATOM 76 CD GLU D 13 -44.069 68.507 -10.383 1.00 0.66 \ ATOM 77 OE1 GLU D 13 -42.959 68.354 -9.786 1.00 0.66 \ ATOM 78 OE2 GLU D 13 -44.172 68.941 -11.558 1.00 0.66 \ ATOM 79 N ALA D 14 -48.426 68.967 -7.591 1.00 -0.03 \ ATOM 80 CA ALA D 14 -49.666 68.204 -7.498 1.00 -0.03 \ ATOM 81 C ALA D 14 -50.794 68.972 -8.101 1.00 -0.03 \ ATOM 82 O ALA D 14 -51.544 68.463 -8.938 1.00 -0.03 \ ATOM 83 CB ALA D 14 -49.984 67.906 -6.076 1.00 -0.03 \ ATOM 84 N LEU D 15 -50.913 70.224 -7.686 1.00 1.71 \ ATOM 85 CA LEU D 15 -51.996 71.029 -8.206 1.00 1.71 \ ATOM 86 C LEU D 15 -51.908 71.053 -9.710 1.00 1.71 \ ATOM 87 O LEU D 15 -52.933 70.989 -10.417 1.00 1.71 \ ATOM 88 CB LEU D 15 -51.976 72.446 -7.643 1.00 1.71 \ ATOM 89 CG LEU D 15 -52.346 72.695 -6.170 1.00 1.71 \ ATOM 90 CD1 LEU D 15 -52.336 74.236 -5.842 1.00 1.71 \ ATOM 91 CD2 LEU D 15 -53.656 72.104 -5.761 1.00 1.71 \ ATOM 92 N TYR D 16 -50.680 71.098 -10.204 1.00 -0.22 \ ATOM 93 CA TYR D 16 -50.431 71.135 -11.624 1.00 -0.22 \ ATOM 94 C TYR D 16 -51.029 69.922 -12.342 1.00 -0.22 \ ATOM 95 O TYR D 16 -51.567 70.039 -13.441 1.00 -0.22 \ ATOM 96 CB TYR D 16 -48.919 71.201 -11.906 1.00 -0.22 \ ATOM 97 CG TYR D 16 -48.629 71.216 -13.374 1.00 -0.22 \ ATOM 98 CD1 TYR D 16 -48.697 72.356 -14.045 1.00 -0.22 \ ATOM 99 CD2 TYR D 16 -48.349 70.065 -14.098 1.00 -0.22 \ ATOM 100 CE1 TYR D 16 -48.480 72.406 -15.360 1.00 -0.22 \ ATOM 101 CE2 TYR D 16 -48.121 70.144 -15.501 1.00 -0.22 \ ATOM 102 CZ TYR D 16 -48.181 71.311 -16.084 1.00 -0.22 \ ATOM 103 OH TYR D 16 -48.009 71.567 -17.456 1.00 -0.22 \ ATOM 104 N LEU D 17 -50.889 68.746 -11.744 1.00 -0.23 \ ATOM 105 CA LEU D 17 -51.371 67.483 -12.350 1.00 -0.23 \ ATOM 106 C LEU D 17 -52.875 67.314 -12.163 1.00 -0.23 \ ATOM 107 O LEU D 17 -53.566 66.717 -12.986 1.00 -0.23 \ ATOM 108 CB LEU D 17 -50.643 66.261 -11.769 1.00 -0.23 \ ATOM 109 CG LEU D 17 -49.156 65.962 -12.113 1.00 -0.23 \ ATOM 110 CD1 LEU D 17 -48.555 64.828 -11.233 1.00 -0.23 \ ATOM 111 CD2 LEU D 17 -48.947 65.635 -13.587 1.00 -0.23 \ ATOM 112 N VAL D 18 -53.349 67.735 -11.003 1.00 0.24 \ ATOM 113 CA VAL D 18 -54.776 67.665 -10.682 1.00 0.24 \ ATOM 114 C VAL D 18 -55.693 68.643 -11.441 1.00 0.24 \ ATOM 115 O VAL D 18 -56.782 68.265 -11.878 1.00 0.24 \ ATOM 116 CB VAL D 18 -54.984 67.901 -9.195 1.00 0.24 \ ATOM 117 CG1 VAL D 18 -56.490 68.001 -8.877 1.00 0.24 \ ATOM 118 CG2 VAL D 18 -54.329 66.786 -8.405 1.00 0.24 \ ATOM 119 N CYS D 19 -55.290 69.907 -11.527 1.00 1.71 \ ATOM 120 CA CYS D 19 -56.105 70.972 -12.113 1.00 1.71 \ ATOM 121 C CYS D 19 -56.102 71.011 -13.625 1.00 1.71 \ ATOM 122 O CYS D 19 -57.190 71.059 -14.244 1.00 1.71 \ ATOM 123 CB CYS D 19 -55.660 72.305 -11.590 1.00 1.71 \ ATOM 124 SG CYS D 19 -55.666 72.261 -9.825 1.00 1.71 \ ATOM 125 N GLY D 20 -54.918 70.835 -14.195 1.00 -0.18 \ ATOM 126 CA GLY D 20 -54.708 70.771 -15.624 1.00 -0.18 \ ATOM 127 C GLY D 20 -54.941 72.040 -16.404 1.00 -0.18 \ ATOM 128 O GLY D 20 -54.312 73.079 -16.115 1.00 -0.18 \ ATOM 129 N GLU D 21 -55.809 71.944 -17.408 1.00 0.19 \ ATOM 130 CA GLU D 21 -56.153 73.054 -18.292 1.00 0.19 \ ATOM 131 C GLU D 21 -56.843 74.132 -17.487 1.00 0.19 \ ATOM 132 O GLU D 21 -56.750 75.315 -17.816 1.00 0.19 \ ATOM 133 CB GLU D 21 -57.052 72.587 -19.448 1.00 0.19 \ ATOM 134 N ARG D 22 -57.533 73.705 -16.430 1.00 -0.63 \ ATOM 135 CA ARG D 22 -58.267 74.602 -15.531 1.00 -0.63 \ ATOM 136 C ARG D 22 -57.314 75.581 -14.820 1.00 -0.63 \ ATOM 137 O ARG D 22 -57.707 76.649 -14.324 1.00 -0.63 \ ATOM 138 CB ARG D 22 -59.048 73.795 -14.480 1.00 -0.63 \ ATOM 139 CG ARG D 22 -60.155 72.879 -14.991 1.00 -0.63 \ ATOM 140 CD ARG D 22 -60.942 72.257 -13.822 1.00 -0.63 \ ATOM 141 NE ARG D 22 -60.285 71.103 -13.199 1.00 -0.63 \ ATOM 142 CZ ARG D 22 -60.743 70.486 -12.114 1.00 -0.63 \ ATOM 143 NH1 ARG D 22 -61.860 70.909 -11.521 1.00 -0.63 \ ATOM 144 NH2 ARG D 22 -60.089 69.449 -11.627 1.00 -0.63 \ ATOM 145 N GLY D 23 -56.072 75.161 -14.693 1.00 1.71 \ ATOM 146 CA GLY D 23 -55.088 75.985 -14.025 1.00 1.71 \ ATOM 147 C GLY D 23 -55.411 76.038 -12.543 1.00 1.71 \ ATOM 148 O GLY D 23 -56.304 75.355 -12.069 1.00 1.71 \ ATOM 149 N PHE D 24 -54.674 76.839 -11.792 1.00 1.12 \ ATOM 150 CA PHE D 24 -54.870 76.851 -10.350 1.00 1.12 \ ATOM 151 C PHE D 24 -54.173 78.058 -9.827 1.00 1.12 \ ATOM 152 O PHE D 24 -53.461 78.715 -10.578 1.00 1.12 \ ATOM 153 CB PHE D 24 -54.267 75.601 -9.701 1.00 1.12 \ ATOM 154 CG PHE D 24 -52.754 75.534 -9.823 1.00 1.12 \ ATOM 155 CD1 PHE D 24 -52.162 74.909 -10.898 1.00 1.12 \ ATOM 156 CD2 PHE D 24 -51.930 76.121 -8.876 1.00 1.12 \ ATOM 157 CE1 PHE D 24 -50.801 74.869 -11.021 1.00 1.12 \ ATOM 158 CE2 PHE D 24 -50.543 76.081 -8.997 1.00 1.12 \ ATOM 159 CZ PHE D 24 -49.990 75.459 -10.066 1.00 1.12 \ ATOM 160 N PHE D 25 -54.324 78.285 -8.527 1.00 0.52 \ ATOM 161 CA PHE D 25 -53.678 79.370 -7.774 1.00 0.52 \ ATOM 162 C PHE D 25 -52.890 78.928 -6.529 1.00 0.52 \ ATOM 163 O PHE D 25 -53.318 78.040 -5.799 1.00 0.52 \ ATOM 164 CB PHE D 25 -54.749 80.325 -7.360 1.00 0.52 \ ATOM 165 CG PHE D 25 -56.023 79.639 -7.012 1.00 0.52 \ ATOM 166 CD1 PHE D 25 -57.075 79.589 -7.920 1.00 0.52 \ ATOM 167 CD2 PHE D 25 -56.168 79.027 -5.779 1.00 0.52 \ ATOM 168 CE1 PHE D 25 -58.265 78.967 -7.584 1.00 0.52 \ ATOM 169 CE2 PHE D 25 -57.343 78.397 -5.435 1.00 0.52 \ ATOM 170 CZ PHE D 25 -58.397 78.365 -6.338 1.00 0.52 \ ATOM 171 N TYR D 26 -51.715 79.488 -6.295 1.00 -0.25 \ ATOM 172 CA TYR D 26 -51.017 79.131 -5.076 1.00 -0.25 \ ATOM 173 C TYR D 26 -50.673 80.327 -4.249 1.00 -0.25 \ ATOM 174 O TYR D 26 -49.996 81.203 -4.758 1.00 -0.25 \ ATOM 175 CB TYR D 26 -49.736 78.367 -5.378 1.00 -0.25 \ ATOM 176 CG TYR D 26 -48.913 78.131 -4.132 1.00 -0.25 \ ATOM 177 CD1 TYR D 26 -49.150 77.046 -3.290 1.00 -0.25 \ ATOM 178 CD2 TYR D 26 -47.937 79.047 -3.754 1.00 -0.25 \ ATOM 179 CE1 TYR D 26 -48.383 76.847 -2.128 1.00 -0.25 \ ATOM 180 CE2 TYR D 26 -47.191 78.883 -2.614 1.00 -0.25 \ ATOM 181 CZ TYR D 26 -47.412 77.794 -1.787 1.00 -0.25 \ ATOM 182 OH TYR D 26 -46.620 77.683 -0.636 1.00 -0.25 \ ATOM 183 N THR D 27 -51.014 80.310 -2.962 1.00 -0.98 \ ATOM 184 CA THR D 27 -50.551 81.361 -2.049 1.00 -0.98 \ ATOM 185 C THR D 27 -50.094 80.829 -0.666 1.00 -0.98 \ ATOM 186 O THR D 27 -50.606 79.812 -0.178 1.00 -0.98 \ ATOM 187 CB THR D 27 -51.640 82.431 -1.840 1.00 -0.98 \ """, "e5uu4D1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5uu4D1_csv", state=0, origin=1) cmd.zoom("e5uu4D1_csv", animate=-1)