cmd.read_pdbstr("""\ ATOM 1 N PHE B 1 -5.532 -9.557 -5.914 1.00 -1.00 \ ATOM 2 CA PHE B 1 -6.384 -9.446 -4.711 1.00 -1.00 \ ATOM 3 C PHE B 1 -6.320 -10.714 -3.871 1.00 -1.00 \ ATOM 4 O PHE B 1 -6.845 -10.674 -2.722 1.00 -1.00 \ ATOM 5 CB PHE B 1 -7.876 -9.147 -5.073 1.00 -1.00 \ ATOM 6 CG PHE B 1 -8.552 -10.155 -6.026 1.00 -1.00 \ ATOM 7 CD1 PHE B 1 -8.207 -10.237 -7.328 1.00 -1.00 \ ATOM 8 CD2 PHE B 1 -9.471 -11.083 -5.565 1.00 -1.00 \ ATOM 9 CE1 PHE B 1 -8.757 -11.170 -8.168 1.00 -1.00 \ ATOM 10 CE2 PHE B 1 -10.073 -11.988 -6.433 1.00 -1.00 \ ATOM 11 CZ PHE B 1 -9.730 -12.000 -7.731 1.00 -1.00 \ ATOM 12 N VAL B 2 -5.848 -11.855 -4.384 1.00 -1.00 \ ATOM 13 CA VAL B 2 -5.900 -13.096 -3.570 1.00 -1.00 \ ATOM 14 C VAL B 2 -4.684 -13.280 -2.658 1.00 -1.00 \ ATOM 15 O VAL B 2 -4.755 -14.017 -1.703 1.00 -1.00 \ ATOM 16 CB VAL B 2 -6.117 -14.347 -4.366 1.00 -1.00 \ ATOM 17 CG1 VAL B 2 -7.483 -14.224 -5.101 1.00 -1.00 \ ATOM 18 CG2 VAL B 2 -5.023 -14.628 -5.299 1.00 -1.00 \ ATOM 19 N ASN B 3 -3.584 -12.582 -2.980 1.00 -0.47 \ ATOM 20 CA ASN B 3 -2.334 -12.900 -2.283 1.00 -0.47 \ ATOM 21 C ASN B 3 -2.107 -11.927 -1.104 1.00 -0.47 \ ATOM 22 O ASN B 3 -1.196 -11.057 -1.042 1.00 -0.47 \ ATOM 23 CB ASN B 3 -1.154 -12.873 -3.291 1.00 -0.47 \ ATOM 24 CG ASN B 3 -1.288 -13.904 -4.294 1.00 -0.47 \ ATOM 25 OD1 ASN B 3 -1.096 -15.093 -4.084 1.00 -0.47 \ ATOM 26 ND2 ASN B 3 -1.746 -13.436 -5.487 1.00 -0.47 \ ATOM 27 N GLN B 4 -3.023 -12.031 -0.161 1.00 0.22 \ ATOM 28 CA GLN B 4 -3.051 -11.222 1.046 1.00 0.22 \ ATOM 29 C GLN B 4 -3.793 -11.970 2.128 1.00 0.22 \ ATOM 30 O GLN B 4 -4.311 -13.052 1.913 1.00 0.22 \ ATOM 31 CB GLN B 4 -3.685 -9.875 0.792 1.00 0.22 \ ATOM 32 CG GLN B 4 -5.131 -9.976 0.355 1.00 0.22 \ ATOM 33 CD GLN B 4 -5.727 -8.607 0.000 1.00 0.22 \ ATOM 34 OE1 GLN B 4 -5.694 -7.718 0.789 1.00 0.22 \ ATOM 35 NE2 GLN B 4 -6.313 -8.488 -1.136 1.00 0.22 \ ATOM 36 N HIS B 5 -3.861 -11.401 3.333 1.00 -0.04 \ ATOM 37 CA HIS B 5 -4.681 -11.989 4.370 1.00 -0.04 \ ATOM 38 C HIS B 5 -6.156 -11.677 4.056 1.00 -0.04 \ ATOM 39 O HIS B 5 -6.444 -10.517 3.784 1.00 -0.04 \ ATOM 40 CB HIS B 5 -4.375 -11.403 5.773 1.00 -0.04 \ ATOM 41 CG HIS B 5 -2.998 -11.724 6.299 1.00 -0.04 \ ATOM 42 ND1 HIS B 5 -1.923 -10.906 6.076 1.00 -0.04 \ ATOM 43 CD2 HIS B 5 -2.541 -12.801 6.936 1.00 -0.04 \ ATOM 44 CE1 HIS B 5 -0.845 -11.464 6.585 1.00 -0.04 \ ATOM 45 NE2 HIS B 5 -1.185 -12.608 7.115 1.00 -0.04 \ ATOM 46 N LEU B 6 -6.984 -12.658 4.015 1.00 1.15 \ ATOM 47 CA LEU B 6 -8.414 -12.555 3.681 1.00 1.15 \ ATOM 48 C LEU B 6 -9.179 -13.235 4.802 1.00 1.15 \ ATOM 49 O LEU B 6 -9.170 -14.440 4.911 1.00 1.15 \ ATOM 50 CB LEU B 6 -8.680 -13.215 2.350 1.00 1.15 \ ATOM 51 CG LEU B 6 -8.029 -12.506 1.159 1.00 1.15 \ ATOM 52 CD1 LEU B 6 -8.138 -13.457 0.036 1.00 1.15 \ ATOM 53 CD2 LEU B 6 -8.575 -11.101 0.916 1.00 1.15 \ ATOM 54 N CYS B 7 -10.049 -12.450 5.481 1.00 1.70 \ ATOM 55 CA CYS B 7 -10.820 -13.004 6.537 1.00 1.70 \ ATOM 56 C CYS B 7 -12.324 -12.658 6.362 1.00 1.70 \ ATOM 57 O CYS B 7 -12.645 -11.600 5.826 1.00 1.70 \ ATOM 58 CB CYS B 7 -10.394 -12.466 7.898 1.00 1.70 \ ATOM 59 SG CYS B 7 -8.628 -12.788 8.283 1.00 1.70 \ ATOM 60 N GLY B 8 -13.085 -13.610 6.879 1.00 0.71 \ ATOM 61 CA GLY B 8 -14.579 -13.378 6.955 1.00 0.71 \ ATOM 62 C GLY B 8 -15.145 -13.042 5.583 1.00 0.71 \ ATOM 63 O GLY B 8 -14.917 -13.755 4.637 1.00 0.71 \ ATOM 64 N SER B 9 -15.939 -11.950 5.443 1.00 -0.48 \ ATOM 65 CA SER B 9 -16.582 -11.638 4.194 1.00 -0.48 \ ATOM 66 C SER B 9 -15.556 -11.369 3.092 1.00 -0.48 \ ATOM 67 O SER B 9 -15.860 -11.556 1.883 1.00 -0.48 \ ATOM 68 CB SER B 9 -17.572 -10.459 4.275 1.00 -0.48 \ ATOM 69 OG SER B 9 -16.885 -9.307 4.455 1.00 -0.48 \ ATOM 70 N HIS B 10 -14.356 -10.959 3.481 1.00 -0.23 \ ATOM 71 CA HIS B 10 -13.321 -10.691 2.465 1.00 -0.23 \ ATOM 72 C HIS B 10 -12.824 -11.972 1.797 1.00 -0.23 \ ATOM 73 O HIS B 10 -12.524 -11.990 0.565 1.00 -0.23 \ ATOM 74 CB HIS B 10 -12.118 -10.044 3.120 1.00 -0.23 \ ATOM 75 CG HIS B 10 -12.434 -8.751 3.859 1.00 -0.23 \ ATOM 76 ND1 HIS B 10 -11.423 -7.921 4.302 1.00 -0.23 \ ATOM 77 CD2 HIS B 10 -13.602 -8.112 4.149 1.00 -0.23 \ ATOM 78 CE1 HIS B 10 -11.956 -6.833 4.833 1.00 -0.23 \ ATOM 79 NE2 HIS B 10 -13.272 -6.936 4.814 1.00 -0.23 \ ATOM 80 N LEU B 11 -12.798 -13.006 2.575 1.00 1.70 \ ATOM 81 CA LEU B 11 -12.472 -14.358 2.076 1.00 1.70 \ ATOM 82 C LEU B 11 -13.524 -14.967 1.242 1.00 1.70 \ ATOM 83 O LEU B 11 -13.302 -15.520 0.142 1.00 1.70 \ ATOM 84 CB LEU B 11 -12.082 -15.266 3.271 1.00 1.70 \ ATOM 85 CG LEU B 11 -11.627 -16.690 3.004 1.00 1.70 \ ATOM 86 CD1 LEU B 11 -10.534 -16.664 1.928 1.00 1.70 \ ATOM 87 CD2 LEU B 11 -11.172 -17.269 4.342 1.00 1.70 \ ATOM 88 N VAL B 12 -14.791 -14.873 1.715 1.00 0.71 \ ATOM 89 CA VAL B 12 -15.906 -15.330 0.936 1.00 0.71 \ ATOM 90 C VAL B 12 -15.970 -14.611 -0.443 1.00 0.71 \ ATOM 91 O VAL B 12 -16.291 -15.198 -1.476 1.00 0.71 \ ATOM 92 CB VAL B 12 -17.233 -15.175 1.722 1.00 0.71 \ ATOM 93 CG1 VAL B 12 -18.377 -15.288 0.860 1.00 0.71 \ ATOM 94 CG2 VAL B 12 -17.207 -16.169 2.890 1.00 0.71 \ ATOM 95 N GLU B 13 -15.707 -13.296 -0.442 1.00 0.66 \ ATOM 96 CA GLU B 13 -15.707 -12.534 -1.701 1.00 0.66 \ ATOM 97 C GLU B 13 -14.677 -13.042 -2.672 1.00 0.66 \ ATOM 98 O GLU B 13 -14.949 -13.203 -3.865 1.00 0.66 \ ATOM 99 CB GLU B 13 -15.429 -11.056 -1.390 1.00 0.66 \ ATOM 100 CG GLU B 13 -15.347 -10.211 -2.623 1.00 0.66 \ ATOM 101 CD GLU B 13 -15.493 -8.709 -2.241 1.00 0.66 \ ATOM 102 OE1 GLU B 13 -16.531 -8.340 -1.566 1.00 0.66 \ ATOM 103 OE2 GLU B 13 -14.658 -7.970 -2.717 1.00 0.66 \ ATOM 104 N ALA B 14 -13.473 -13.306 -2.154 1.00 -0.00 \ ATOM 105 CA ALA B 14 -12.396 -13.859 -2.990 1.00 -0.00 \ ATOM 106 C ALA B 14 -12.774 -15.200 -3.572 1.00 -0.00 \ ATOM 107 O ALA B 14 -12.566 -15.393 -4.794 1.00 -0.00 \ ATOM 108 CB ALA B 14 -11.122 -13.960 -2.191 1.00 -0.00 \ ATOM 109 N LEU B 15 -13.358 -16.125 -2.773 1.00 1.70 \ ATOM 110 CA LEU B 15 -13.828 -17.417 -3.288 1.00 1.70 \ ATOM 111 C LEU B 15 -14.898 -17.221 -4.355 1.00 1.70 \ ATOM 112 O LEU B 15 -14.885 -17.827 -5.435 1.00 1.70 \ ATOM 113 CB LEU B 15 -14.417 -18.204 -2.169 1.00 1.70 \ ATOM 114 CG LEU B 15 -13.455 -18.807 -1.234 1.00 1.70 \ ATOM 115 CD1 LEU B 15 -14.124 -19.220 0.113 1.00 1.70 \ ATOM 116 CD2 LEU B 15 -12.763 -20.018 -1.897 1.00 1.70 \ ATOM 117 N TYR B 16 -15.827 -16.257 -4.127 1.00 -0.22 \ ATOM 118 CA TYR B 16 -16.846 -15.984 -5.109 1.00 -0.22 \ ATOM 119 C TYR B 16 -16.244 -15.505 -6.427 1.00 -0.22 \ ATOM 120 O TYR B 16 -16.636 -16.021 -7.499 1.00 -0.22 \ ATOM 121 CB TYR B 16 -17.795 -14.917 -4.556 1.00 -0.22 \ ATOM 122 CG TYR B 16 -18.792 -14.419 -5.538 1.00 -0.22 \ ATOM 123 CD1 TYR B 16 -19.866 -15.181 -5.944 1.00 -0.22 \ ATOM 124 CD2 TYR B 16 -18.648 -13.142 -6.065 1.00 -0.22 \ ATOM 125 CE1 TYR B 16 -20.792 -14.627 -6.859 1.00 -0.22 \ ATOM 126 CE2 TYR B 16 -19.533 -12.571 -7.001 1.00 -0.22 \ ATOM 127 CZ TYR B 16 -20.633 -13.324 -7.382 1.00 -0.22 \ ATOM 128 OH TYR B 16 -21.563 -12.832 -8.261 1.00 -0.22 \ ATOM 129 N LEU B 17 -15.304 -14.566 -6.372 1.00 -0.23 \ ATOM 130 CA LEU B 17 -14.728 -14.068 -7.590 1.00 -0.23 \ ATOM 131 C LEU B 17 -13.847 -15.039 -8.340 1.00 -0.23 \ ATOM 132 O LEU B 17 -13.931 -15.071 -9.584 1.00 -0.23 \ ATOM 133 CB LEU B 17 -13.918 -12.815 -7.264 1.00 -0.23 \ ATOM 134 CG LEU B 17 -14.755 -11.578 -6.850 1.00 -0.23 \ ATOM 135 CD1 LEU B 17 -13.887 -10.421 -6.335 1.00 -0.23 \ ATOM 136 CD2 LEU B 17 -15.702 -11.137 -7.965 1.00 -0.23 \ ATOM 137 N VAL B 18 -13.112 -15.825 -7.630 1.00 0.28 \ ATOM 138 CA VAL B 18 -12.170 -16.771 -8.253 1.00 0.28 \ ATOM 139 C VAL B 18 -12.942 -17.950 -8.774 1.00 0.28 \ ATOM 140 O VAL B 18 -12.723 -18.393 -9.962 1.00 0.28 \ ATOM 141 CB VAL B 18 -11.111 -17.216 -7.212 1.00 0.28 \ ATOM 142 CG1 VAL B 18 -10.498 -18.531 -7.629 1.00 0.28 \ ATOM 143 CG2 VAL B 18 -10.189 -15.989 -7.090 1.00 0.28 \ ATOM 144 N CYS B 19 -13.868 -18.483 -7.978 1.00 1.70 \ ATOM 145 CA CYS B 19 -14.497 -19.736 -8.331 1.00 1.70 \ ATOM 146 C CYS B 19 -15.544 -19.617 -9.446 1.00 1.70 \ ATOM 147 O CYS B 19 -15.751 -20.574 -10.205 1.00 1.70 \ ATOM 148 CB CYS B 19 -15.093 -20.460 -7.112 1.00 1.70 \ ATOM 149 SG CYS B 19 -13.775 -20.954 -5.940 1.00 1.70 \ ATOM 150 N GLY B 20 -16.205 -18.480 -9.503 1.00 -0.16 \ ATOM 151 CA GLY B 20 -17.216 -18.196 -10.486 1.00 -0.16 \ ATOM 152 C GLY B 20 -18.324 -19.243 -10.451 1.00 -0.16 \ ATOM 153 O GLY B 20 -18.773 -19.673 -9.396 1.00 -0.16 \ ATOM 154 N GLU B 21 -18.611 -19.770 -11.659 1.00 0.19 \ ATOM 155 CA GLU B 21 -19.722 -20.739 -11.800 1.00 0.19 \ ATOM 156 C GLU B 21 -19.410 -22.085 -11.246 1.00 0.19 \ ATOM 157 O GLU B 21 -20.320 -22.866 -11.052 1.00 0.19 \ ATOM 158 CB GLU B 21 -20.173 -20.904 -13.253 1.00 0.19 \ ATOM 159 CG GLU B 21 -20.550 -19.629 -13.972 1.00 0.19 \ ATOM 160 CD GLU B 21 -21.628 -18.756 -13.290 1.00 0.19 \ ATOM 161 OE1 GLU B 21 -22.501 -19.259 -12.499 1.00 0.19 \ ATOM 162 OE2 GLU B 21 -21.593 -17.518 -13.593 1.00 0.19 \ ATOM 163 N ARG B 22 -18.171 -22.371 -10.933 1.00 -0.61 \ ATOM 164 CA ARG B 22 -17.840 -23.569 -10.264 1.00 -0.61 \ ATOM 165 C ARG B 22 -18.494 -23.600 -8.849 1.00 -0.61 \ ATOM 166 O ARG B 22 -18.655 -24.665 -8.243 1.00 -0.61 \ ATOM 167 CB ARG B 22 -16.374 -23.711 -10.123 1.00 -0.61 \ ATOM 168 CG ARG B 22 -15.588 -23.834 -11.457 1.00 -0.61 \ ATOM 169 CD ARG B 22 -14.093 -23.932 -11.202 1.00 -0.61 \ ATOM 170 NE ARG B 22 -13.492 -22.575 -11.010 1.00 -0.61 \ ATOM 171 CZ ARG B 22 -12.189 -22.366 -10.788 1.00 -0.61 \ ATOM 172 NH1 ARG B 22 -11.361 -23.434 -10.704 1.00 -0.61 \ ATOM 173 NH2 ARG B 22 -11.701 -21.113 -10.615 1.00 -0.61 \ ATOM 174 N GLY B 23 -18.826 -22.447 -8.268 1.00 1.70 \ ATOM 175 CA GLY B 23 -19.239 -22.439 -6.856 1.00 1.70 \ ATOM 176 C GLY B 23 -18.079 -22.718 -5.928 1.00 1.70 \ ATOM 177 O GLY B 23 -16.922 -22.939 -6.358 1.00 1.70 \ ATOM 178 N PHE B 24 -18.357 -22.787 -4.653 1.00 1.13 \ ATOM 179 CA PHE B 24 -17.339 -23.112 -3.679 1.00 1.13 \ ATOM 180 C PHE B 24 -17.917 -23.546 -2.351 1.00 1.13 \ ATOM 181 O PHE B 24 -19.127 -23.402 -2.088 1.00 1.13 \ ATOM 182 CB PHE B 24 -16.412 -21.868 -3.435 1.00 1.13 \ ATOM 183 CG PHE B 24 -17.137 -20.661 -2.887 1.00 1.13 \ ATOM 184 CD1 PHE B 24 -17.308 -20.515 -1.469 1.00 1.13 \ ATOM 185 CD2 PHE B 24 -17.725 -19.720 -3.750 1.00 1.13 \ ATOM 186 CE1 PHE B 24 -18.031 -19.392 -0.991 1.00 1.13 \ ATOM 187 CE2 PHE B 24 -18.427 -18.611 -3.252 1.00 1.13 \ ATOM 188 CZ PHE B 24 -18.599 -18.472 -1.885 1.00 1.13 \ ATOM 189 N PHE B 25 -17.038 -24.079 -1.534 1.00 0.52 \ ATOM 190 CA PHE B 25 -17.300 -24.322 -0.145 1.00 0.52 \ ATOM 191 C PHE B 25 -16.499 -23.486 0.837 1.00 0.52 \ ATOM 192 O PHE B 25 -15.277 -23.301 0.696 1.00 0.52 \ ATOM 193 CB PHE B 25 -17.306 -25.834 0.091 1.00 0.52 \ ATOM 194 CG PHE B 25 -16.027 -26.509 0.276 1.00 0.52 \ ATOM 195 CD1 PHE B 25 -15.576 -26.840 1.610 1.00 0.52 \ ATOM 196 CD2 PHE B 25 -15.309 -27.118 -0.830 1.00 0.52 \ ATOM 197 CE1 PHE B 25 -14.380 -27.605 1.815 1.00 0.52 \ ATOM 198 CE2 PHE B 25 -14.090 -27.878 -0.605 1.00 0.52 \ ATOM 199 CZ PHE B 25 -13.650 -28.126 0.702 1.00 0.52 \ ATOM 200 N TYR B 26 -17.161 -22.860 1.810 1.00 -0.24 \ ATOM 201 CA TYR B 26 -16.476 -22.069 2.829 1.00 -0.24 \ ATOM 202 C TYR B 26 -16.691 -22.777 4.174 1.00 -0.24 \ ATOM 203 O TYR B 26 -17.822 -22.854 4.651 1.00 -0.24 \ ATOM 204 CB TYR B 26 -17.062 -20.697 2.847 1.00 -0.24 \ ATOM 205 CG TYR B 26 -16.578 -19.866 3.957 1.00 -0.24 \ ATOM 206 CD1 TYR B 26 -15.206 -19.524 4.075 1.00 -0.24 \ ATOM 207 CD2 TYR B 26 -17.445 -19.446 4.932 1.00 -0.24 \ ATOM 208 CE1 TYR B 26 -14.718 -18.718 5.113 1.00 -0.24 \ ATOM 209 CE2 TYR B 26 -17.022 -18.631 5.959 1.00 -0.24 \ ATOM 210 CZ TYR B 26 -15.676 -18.289 6.113 1.00 -0.24 \ ATOM 211 OH TYR B 26 -15.251 -17.503 7.161 1.00 -0.24 \ ATOM 212 N THR B 27 -15.628 -23.350 4.722 1.00 -0.98 \ ATOM 213 CA THR B 27 -15.689 -24.154 5.969 1.00 -0.98 \ ATOM 214 C THR B 27 -14.714 -23.642 6.970 1.00 -0.98 \ ATOM 215 O THR B 27 -13.561 -24.111 7.000 1.00 -0.98 \ ATOM 216 CB THR B 27 -15.371 -25.647 5.647 1.00 -0.98 \ ATOM 217 OG1 THR B 27 -16.232 -26.085 4.588 1.00 -0.98 \ ATOM 218 CG2 THR B 27 -15.622 -26.512 6.913 1.00 -0.98 \ ATOM 219 N PRO B 28 -15.094 -22.642 7.742 1.00 -0.79 \ ATOM 220 CA PRO B 28 -14.099 -21.952 8.558 1.00 -0.79 \ ATOM 221 C PRO B 28 -13.623 -22.782 9.781 1.00 -0.79 \ ATOM 222 O PRO B 28 -12.515 -22.531 10.292 1.00 -0.79 \ ATOM 223 CB PRO B 28 -14.803 -20.694 9.019 1.00 -0.79 \ ATOM 224 CG PRO B 28 -16.254 -21.026 8.886 1.00 -0.79 \ ATOM 225 CD PRO B 28 -16.355 -21.901 7.679 1.00 -0.79 \ ATOM 226 N LYS B 29 -14.469 -23.700 10.224 1.00 -0.90 \ ATOM 227 CA LYS B 29 -14.123 -24.829 11.125 1.00 -0.90 \ ATOM 228 C LYS B 29 -14.734 -24.392 12.437 1.00 -0.90 \ ATOM 229 O LYS B 29 -15.761 -24.969 12.822 1.00 -0.90 \ ATOM 230 CB LYS B 29 -12.612 -25.134 11.248 1.00 -0.90 \ ATOM 231 CG LYS B 29 -12.244 -26.584 11.505 1.00 -0.90 \ ATOM 232 CD LYS B 29 -10.867 -26.696 12.178 1.00 -0.90 \ ATOM 233 CE LYS B 29 -9.711 -26.110 11.352 1.00 -0.90 \ ATOM 234 NZ LYS B 29 -9.232 -27.054 10.306 1.00 -0.90 \ """, "e5vizB1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5vizB1_csv", state=0, origin=1) cmd.zoom("e5vizB1_csv", animate=-1)