cmd.read_pdbstr("""\ ATOM 1 N ASP B 349 25.467 -24.795 17.859 1.00 2.40 \ ATOM 2 CA ASP B 349 24.253 -24.370 17.146 1.00 2.40 \ ATOM 3 C ASP B 349 23.920 -22.931 17.540 1.00 2.40 \ ATOM 4 O ASP B 349 23.572 -22.103 16.694 1.00 2.40 \ ATOM 5 CB ASP B 349 23.043 -25.277 17.473 1.00 2.40 \ ATOM 6 CG ASP B 349 23.296 -26.763 17.225 1.00 2.40 \ ATOM 7 OD1 ASP B 349 23.677 -27.103 16.088 1.00 2.40 \ ATOM 8 OD2 ASP B 349 23.043 -27.600 18.158 1.00 2.40 \ ATOM 9 N GLY B 350 24.074 -22.631 18.832 1.00 -1.00 \ ATOM 10 CA GLY B 350 23.791 -21.304 19.367 1.00 -1.00 \ ATOM 11 C GLY B 350 24.664 -20.197 18.786 1.00 -1.00 \ ATOM 12 O GLY B 350 24.182 -19.097 18.552 1.00 -1.00 \ ATOM 13 N LEU B 351 25.945 -20.492 18.578 1.00 -0.35 \ ATOM 14 CA LEU B 351 26.888 -19.559 17.981 1.00 -0.35 \ ATOM 15 C LEU B 351 26.437 -19.093 16.602 1.00 -0.35 \ ATOM 16 O LEU B 351 26.588 -17.928 16.277 1.00 -0.35 \ ATOM 17 CB LEU B 351 28.291 -20.185 17.921 1.00 -0.35 \ ATOM 18 CG LEU B 351 29.427 -19.411 17.243 1.00 -0.35 \ ATOM 19 CD1 LEU B 351 29.614 -18.014 17.817 1.00 -0.35 \ ATOM 20 CD2 LEU B 351 30.717 -20.206 17.345 1.00 -0.35 \ ATOM 21 N THR B 352 25.869 -19.989 15.803 1.00 -1.10 \ ATOM 22 CA THR B 352 25.354 -19.608 14.484 1.00 -1.10 \ ATOM 23 C THR B 352 24.216 -18.605 14.604 1.00 -1.10 \ ATOM 24 O THR B 352 24.168 -17.626 13.856 1.00 -1.10 \ ATOM 25 CB THR B 352 24.918 -20.839 13.674 1.00 -1.10 \ ATOM 26 OG1 THR B 352 26.037 -21.722 13.596 1.00 -1.10 \ ATOM 27 CG2 THR B 352 24.471 -20.468 12.264 1.00 -1.10 \ ATOM 28 N ILE B 353 23.339 -18.843 15.570 1.00 -0.20 \ ATOM 29 CA ILE B 353 22.226 -17.936 15.851 1.00 -0.20 \ ATOM 30 C ILE B 353 22.741 -16.546 16.236 1.00 -0.20 \ ATOM 31 O ILE B 353 22.255 -15.541 15.714 1.00 -0.20 \ ATOM 32 CB ILE B 353 21.254 -18.544 16.889 1.00 -0.20 \ ATOM 33 CG1 ILE B 353 20.569 -19.772 16.270 1.00 -0.20 \ ATOM 34 CG2 ILE B 353 20.220 -17.520 17.342 1.00 -0.20 \ ATOM 35 CD1 ILE B 353 19.873 -20.687 17.251 1.00 -0.20 \ ATOM 36 N GLU B 354 23.755 -16.500 17.086 1.00 -0.69 \ ATOM 37 CA GLU B 354 24.389 -15.247 17.476 1.00 -0.69 \ ATOM 38 C GLU B 354 24.993 -14.502 16.287 1.00 -0.69 \ ATOM 39 O GLU B 354 24.850 -13.280 16.188 1.00 -0.69 \ ATOM 40 CB GLU B 354 25.474 -15.486 18.523 1.00 -0.69 \ ATOM 41 CG GLU B 354 24.983 -16.064 19.844 1.00 -0.69 \ ATOM 42 CD GLU B 354 24.007 -15.166 20.584 1.00 -0.69 \ ATOM 43 OE1 GLU B 354 24.227 -13.922 20.606 1.00 -0.69 \ ATOM 44 OE2 GLU B 354 23.032 -15.726 21.156 1.00 -0.69 \ ATOM 45 N ARG B 355 25.650 -15.235 15.389 1.00 -1.27 \ ATOM 46 CA ARG B 355 26.224 -14.644 14.165 1.00 -1.27 \ ATOM 47 C ARG B 355 25.163 -14.039 13.276 1.00 -1.27 \ ATOM 48 O ARG B 355 25.367 -12.958 12.727 1.00 -1.27 \ ATOM 49 CB ARG B 355 27.013 -15.670 13.375 1.00 -1.27 \ ATOM 50 CG ARG B 355 28.323 -16.000 14.059 1.00 -1.27 \ ATOM 51 CD ARG B 355 28.996 -17.184 13.406 1.00 -1.27 \ ATOM 52 NE ARG B 355 30.354 -17.263 13.931 1.00 -1.27 \ ATOM 53 CZ ARG B 355 31.127 -18.345 13.959 1.00 -1.27 \ ATOM 54 NH1 ARG B 355 30.704 -19.512 13.494 1.00 -1.27 \ ATOM 55 NH2 ARG B 355 32.342 -18.246 14.485 1.00 -1.27 \ ATOM 56 N VAL B 356 24.025 -14.711 13.165 1.00 -1.09 \ ATOM 57 CA VAL B 356 22.915 -14.169 12.377 1.00 -1.09 \ ATOM 58 C VAL B 356 22.436 -12.822 12.934 1.00 -1.09 \ ATOM 59 O VAL B 356 22.409 -11.824 12.202 1.00 -1.09 \ ATOM 60 CB VAL B 356 21.756 -15.171 12.252 1.00 -1.09 \ ATOM 61 CG1 VAL B 356 20.539 -14.514 11.596 1.00 -1.09 \ ATOM 62 CG2 VAL B 356 22.198 -16.370 11.436 1.00 -1.09 \ ATOM 63 N ILE B 357 22.077 -12.795 14.215 1.00 -0.23 \ ATOM 64 CA ILE B 357 21.574 -11.553 14.826 1.00 -0.23 \ ATOM 65 C ILE B 357 22.608 -10.415 14.824 1.00 -0.23 \ ATOM 66 O ILE B 357 22.273 -9.285 14.493 1.00 -0.23 \ ATOM 67 CB ILE B 357 20.932 -11.767 16.229 1.00 -0.23 \ ATOM 68 CG1 ILE B 357 21.913 -12.334 17.253 1.00 -0.23 \ ATOM 69 CG2 ILE B 357 19.717 -12.699 16.111 1.00 -0.23 \ ATOM 70 CD1 ILE B 357 21.411 -12.289 18.686 1.00 -0.23 \ ATOM 71 N HIS B 358 23.857 -10.722 15.156 1.00 -0.85 \ ATOM 72 CA HIS B 358 24.917 -9.723 15.104 1.00 -0.85 \ ATOM 73 C HIS B 358 25.251 -9.278 13.683 1.00 -0.85 \ ATOM 74 O HIS B 358 25.617 -8.124 13.483 1.00 -0.85 \ ATOM 75 CB HIS B 358 26.158 -10.198 15.880 1.00 -0.85 \ ATOM 76 CG HIS B 358 26.019 -10.010 17.356 1.00 -0.85 \ ATOM 77 ND1 HIS B 358 25.507 -10.985 18.194 1.00 -0.85 \ ATOM 78 CD2 HIS B 358 26.265 -8.935 18.138 1.00 -0.85 \ ATOM 79 CE1 HIS B 358 25.475 -10.525 19.430 1.00 -0.85 \ ATOM 80 NE2 HIS B 358 25.918 -9.280 19.424 1.00 -0.85 \ ATOM 81 N GLY B 359 25.094 -10.187 12.718 1.00 -1.01 \ ATOM 82 CA GLY B 359 25.243 -9.884 11.292 1.00 -1.01 \ ATOM 83 C GLY B 359 24.170 -8.943 10.768 1.00 -1.01 \ ATOM 84 O GLY B 359 24.449 -8.025 9.998 1.00 -1.01 \ ATOM 85 N MET B 360 22.932 -9.165 11.207 1.00 -1.24 \ ATOM 86 CA MET B 360 21.840 -8.219 10.966 1.00 -1.24 \ ATOM 87 C MET B 360 22.157 -6.856 11.608 1.00 -1.24 \ ATOM 88 O MET B 360 21.942 -5.838 10.987 1.00 -1.24 \ ATOM 89 CB MET B 360 20.522 -8.740 11.530 1.00 -1.24 \ ATOM 90 CG MET B 360 19.971 -9.982 10.884 1.00 -1.24 \ ATOM 91 SD MET B 360 18.441 -10.481 11.717 1.00 -1.24 \ ATOM 92 CE MET B 360 17.935 -11.765 10.575 1.00 -1.24 \ ATOM 93 N ALA B 361 22.684 -6.839 12.831 1.00 -0.70 \ ATOM 94 CA ALA B 361 23.083 -5.562 13.472 1.00 -0.70 \ ATOM 95 C ALA B 361 24.130 -4.829 12.627 1.00 -0.70 \ ATOM 96 O ALA B 361 24.006 -3.634 12.360 1.00 -0.70 \ ATOM 97 CB ALA B 361 23.617 -5.782 14.877 1.00 -0.70 \ ATOM 98 N THR B 362 25.140 -5.567 12.188 1.00 -0.05 \ ATOM 99 CA THR B 362 26.174 -5.024 11.314 1.00 -0.05 \ ATOM 100 C THR B 362 25.544 -4.441 10.051 1.00 -0.05 \ ATOM 101 O THR B 362 25.840 -3.303 9.675 1.00 -0.05 \ ATOM 102 CB THR B 362 27.216 -6.107 10.936 1.00 -0.05 \ ATOM 103 OG1 THR B 362 27.866 -6.552 12.126 1.00 -0.05 \ ATOM 104 CG2 THR B 362 28.268 -5.594 9.932 1.00 -0.05 \ ATOM 105 N SER B 363 24.681 -5.219 9.407 1.00 -0.20 \ ATOM 106 CA SER B 363 24.062 -4.782 8.181 1.00 -0.20 \ ATOM 107 C SER B 363 23.320 -3.478 8.410 1.00 -0.20 \ ATOM 108 O SER B 363 23.446 -2.546 7.611 1.00 -0.20 \ ATOM 109 CB SER B 363 23.116 -5.835 7.616 1.00 -0.20 \ ATOM 110 OG SER B 363 22.522 -5.343 6.447 1.00 -0.20 \ ATOM 111 N ALA B 364 22.572 -3.400 9.505 1.00 1.02 \ ATOM 112 CA ALA B 364 21.813 -2.172 9.799 1.00 1.02 \ ATOM 113 C ALA B 364 22.721 -0.974 10.033 1.00 1.02 \ ATOM 114 O ALA B 364 22.388 0.143 9.657 1.00 1.02 \ ATOM 115 CB ALA B 364 20.894 -2.369 10.989 1.00 1.02 \ ATOM 116 N GLN B 365 23.866 -1.213 10.647 1.00 -0.15 \ ATOM 117 CA GLN B 365 24.837 -0.161 10.874 1.00 -0.15 \ ATOM 118 C GLN B 365 25.520 0.296 9.593 1.00 -0.15 \ ATOM 119 O GLN B 365 25.745 1.480 9.433 1.00 -0.15 \ ATOM 120 CB GLN B 365 25.873 -0.611 11.891 1.00 -0.15 \ ATOM 121 CG GLN B 365 25.299 -0.769 13.274 1.00 -0.15 \ ATOM 122 CD GLN B 365 26.294 -1.374 14.249 1.00 -0.15 \ ATOM 123 OE1 GLN B 365 27.321 -0.765 14.549 1.00 -0.15 \ ATOM 124 NE2 GLN B 365 26.004 -2.579 14.744 1.00 -0.15 \ ATOM 125 N THR B 366 25.824 -0.622 8.683 1.00 0.08 \ ATOM 126 CA THR B 366 26.595 -0.290 7.485 1.00 0.08 \ ATOM 127 C THR B 366 25.732 0.121 6.275 1.00 0.08 \ ATOM 128 O THR B 366 26.239 0.709 5.337 1.00 0.08 \ ATOM 129 CB THR B 366 27.513 -1.473 7.093 1.00 0.08 \ ATOM 130 OG1 THR B 366 26.717 -2.647 6.853 1.00 0.08 \ ATOM 131 CG2 THR B 366 28.550 -1.754 8.209 1.00 0.08 \ ATOM 132 N GLY B 367 24.438 -0.206 6.283 1.00 0.51 \ ATOM 133 CA GLY B 367 23.621 -0.096 5.075 1.00 0.51 \ ATOM 134 C GLY B 367 23.988 -1.083 3.969 1.00 0.51 \ ATOM 135 O GLY B 367 23.560 -0.908 2.844 1.00 0.51 \ ATOM 136 N GLN B 368 24.736 -2.137 4.301 1.00 -0.45 \ ATOM 137 CA GLN B 368 25.219 -3.133 3.330 1.00 -0.45 \ ATOM 138 C GLN B 368 24.706 -4.521 3.704 1.00 -0.45 \ ATOM 139 O GLN B 368 24.592 -4.824 4.884 1.00 -0.45 \ ATOM 140 CB GLN B 368 26.757 -3.176 3.293 1.00 -0.45 \ ATOM 141 CG GLN B 368 27.446 -1.903 2.808 1.00 -0.45 \ ATOM 142 CD GLN B 368 27.100 -1.547 1.371 1.00 -0.45 \ ATOM 143 OE1 GLN B 368 27.022 -2.415 0.499 1.00 -0.45 \ ATOM 144 NE2 GLN B 368 26.866 -0.266 1.122 1.00 -0.45 \ ATOM 145 N PRO B 369 24.418 -5.378 2.700 1.00 -0.40 \ ATOM 146 CA PRO B 369 24.106 -6.775 3.009 1.00 -0.40 \ ATOM 147 C PRO B 369 25.293 -7.481 3.646 1.00 -0.40 \ ATOM 148 O PRO B 369 26.432 -7.044 3.486 1.00 -0.40 \ ATOM 149 CB PRO B 369 23.777 -7.398 1.640 1.00 -0.40 \ ATOM 150 CG PRO B 369 24.389 -6.514 0.635 1.00 -0.40 \ ATOM 151 CD PRO B 369 24.490 -5.136 1.244 1.00 -0.40 \ ATOM 152 N VAL B 370 25.013 -8.544 4.381 1.00 0.11 \ ATOM 153 CA VAL B 370 26.037 -9.331 5.074 1.00 0.11 \ ATOM 154 C VAL B 370 25.786 -10.749 4.632 1.00 0.11 \ ATOM 155 O VAL B 370 24.669 -11.227 4.760 1.00 0.11 \ ATOM 156 CB VAL B 370 25.904 -9.216 6.611 1.00 0.11 \ ATOM 157 CG1 VAL B 370 26.787 -10.220 7.364 1.00 0.11 \ ATOM 158 CG2 VAL B 370 26.247 -7.803 7.050 1.00 0.11 \ ATOM 159 N ASN B 371 26.820 -11.393 4.091 1.00 -0.08 \ ATOM 160 CA ASN B 371 26.772 -12.804 3.750 1.00 -0.08 \ ATOM 161 C ASN B 371 27.343 -13.659 4.860 1.00 -0.08 \ ATOM 162 O ASN B 371 28.241 -13.230 5.596 1.00 -0.08 \ ATOM 163 CB ASN B 371 27.538 -13.053 2.459 1.00 -0.08 \ ATOM 164 CG ASN B 371 26.848 -12.436 1.262 1.00 -0.08 \ ATOM 165 OD1 ASN B 371 25.807 -12.908 0.814 1.00 -0.08 \ ATOM 166 ND2 ASN B 371 27.413 -11.365 0.748 1.00 -0.08 \ ATOM 167 N PHE B 372 26.790 -14.857 4.990 1.00 -0.05 \ ATOM 168 CA PHE B 372 27.316 -15.887 5.874 1.00 -0.05 \ ATOM 169 C PHE B 372 27.809 -17.060 5.015 1.00 -0.05 \ ATOM 170 O PHE B 372 28.603 -17.863 5.502 1.00 -0.05 \ ATOM 171 CB PHE B 372 26.244 -16.347 6.861 1.00 -0.05 \ ATOM 172 CG PHE B 372 25.635 -15.218 7.631 1.00 -0.05 \ ATOM 173 CD1 PHE B 372 26.298 -14.661 8.726 1.00 -0.05 \ ATOM 174 CD2 PHE B 372 24.430 -14.667 7.235 1.00 -0.05 \ ATOM 175 CE1 PHE B 372 25.749 -13.592 9.417 1.00 -0.05 \ ATOM 176 CE2 PHE B 372 23.879 -13.600 7.929 1.00 -0.05 \ ATOM 177 CZ PHE B 372 24.534 -13.056 9.012 1.00 -0.05 \ """, "e5yaqB1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5yaqB1_csv", state=0, origin=1) cmd.zoom("e5yaqB1_csv", animate=-1)