cmd.read_pdbstr("""\ ATOM 1 N LYS A 349 3.733 -2.560 -21.155 1.00 0.75 \ ATOM 2 CA LYS A 349 4.560 -1.975 -22.184 1.00 0.75 \ ATOM 3 C LYS A 349 5.795 -2.839 -22.364 1.00 0.75 \ ATOM 4 O LYS A 349 6.854 -2.615 -21.717 1.00 0.75 \ ATOM 5 CB LYS A 349 5.024 -0.555 -21.791 1.00 0.75 \ ATOM 6 N PRO A 350 5.678 -3.897 -23.173 1.00 1.01 \ ATOM 7 CA PRO A 350 4.465 -4.409 -23.797 1.00 1.01 \ ATOM 8 C PRO A 350 3.592 -5.232 -22.893 1.00 1.01 \ ATOM 9 O PRO A 350 2.380 -5.281 -23.089 1.00 1.01 \ ATOM 10 CB PRO A 350 5.008 -5.250 -25.001 1.00 1.01 \ ATOM 11 CG PRO A 350 6.245 -5.798 -24.487 1.00 1.01 \ ATOM 12 CD PRO A 350 6.851 -4.533 -23.797 1.00 1.01 \ ATOM 13 N PHE A 351 4.220 -5.926 -21.955 1.00 1.06 \ ATOM 14 CA PHE A 351 3.546 -6.911 -21.119 1.00 1.06 \ ATOM 15 C PHE A 351 3.374 -6.341 -19.724 1.00 1.06 \ ATOM 16 O PHE A 351 4.325 -6.367 -18.939 1.00 1.06 \ ATOM 17 CB PHE A 351 4.357 -8.193 -21.036 1.00 1.06 \ ATOM 18 N LYS A 352 2.171 -5.870 -19.393 1.00 -0.96 \ ATOM 19 CA LYS A 352 1.910 -5.423 -18.033 1.00 -0.96 \ ATOM 20 C LYS A 352 1.486 -6.592 -17.157 1.00 -0.96 \ ATOM 21 O LYS A 352 0.797 -7.516 -17.605 1.00 -0.96 \ ATOM 22 CB LYS A 352 0.816 -4.358 -18.008 1.00 -0.96 \ ATOM 23 N CYS A 353 1.875 -6.533 -15.889 1.00 1.93 \ ATOM 24 CA CYS A 353 1.278 -7.510 -15.006 1.00 1.93 \ ATOM 25 C CYS A 353 -0.128 -7.018 -14.681 1.00 1.93 \ ATOM 26 O CYS A 353 -0.491 -5.877 -14.983 1.00 1.93 \ ATOM 27 CB CYS A 353 2.136 -7.702 -13.744 1.00 1.93 \ ATOM 28 SG CYS A 353 1.455 -8.757 -12.438 1.00 1.93 \ ATOM 29 N SER A 354 -0.910 -7.859 -14.017 1.00 -0.86 \ ATOM 30 CA SER A 354 -2.316 -7.541 -13.825 1.00 -0.86 \ ATOM 31 C SER A 354 -2.662 -7.381 -12.357 1.00 -0.86 \ ATOM 32 O SER A 354 -3.622 -6.672 -12.033 1.00 -0.86 \ ATOM 33 CB SER A 354 -3.214 -8.598 -14.482 1.00 -0.86 \ ATOM 34 OG SER A 354 -3.177 -9.828 -13.798 1.00 -0.86 \ ATOM 35 N MET A 355 -1.871 -7.967 -11.462 1.00 -0.60 \ ATOM 36 CA MET A 355 -2.145 -7.871 -10.038 1.00 -0.60 \ ATOM 37 C MET A 355 -1.407 -6.632 -9.560 1.00 -0.60 \ ATOM 38 O MET A 355 -2.006 -5.570 -9.361 1.00 -0.60 \ ATOM 39 CB MET A 355 -1.655 -9.110 -9.279 1.00 -0.60 \ ATOM 40 CG MET A 355 -2.633 -10.284 -9.224 1.00 -0.60 \ ATOM 41 SD MET A 355 -1.735 -11.857 -9.244 1.00 -0.60 \ ATOM 42 CE MET A 355 -1.074 -11.836 -7.578 1.00 -0.60 \ ATOM 43 N CYS A 356 -0.096 -6.761 -9.413 1.00 1.93 \ ATOM 44 CA CYS A 356 0.797 -5.646 -9.153 1.00 1.93 \ ATOM 45 C CYS A 356 1.080 -4.889 -10.448 1.00 1.93 \ ATOM 46 O CYS A 356 0.548 -5.206 -11.517 1.00 1.93 \ ATOM 47 CB CYS A 356 2.098 -6.139 -8.537 1.00 1.93 \ ATOM 48 SG CYS A 356 3.253 -6.766 -9.768 1.00 1.93 \ ATOM 49 N ASP A 357 1.941 -3.872 -10.346 1.00 -0.92 \ ATOM 50 CA ASP A 357 2.147 -2.893 -11.407 1.00 -0.92 \ ATOM 51 C ASP A 357 3.413 -3.155 -12.224 1.00 -0.92 \ ATOM 52 O ASP A 357 4.011 -2.214 -12.770 1.00 -0.92 \ ATOM 53 CB ASP A 357 2.182 -1.486 -10.813 1.00 -0.92 \ ATOM 54 N TYR A 358 3.844 -4.409 -12.321 1.00 1.07 \ ATOM 55 CA TYR A 358 5.072 -4.700 -13.046 1.00 1.07 \ ATOM 56 C TYR A 358 4.803 -4.835 -14.539 1.00 1.07 \ ATOM 57 O TYR A 358 3.775 -5.366 -14.965 1.00 1.07 \ ATOM 58 CB TYR A 358 5.727 -5.984 -12.521 1.00 1.07 \ ATOM 59 CG TYR A 358 7.012 -6.388 -13.232 1.00 1.07 \ ATOM 60 CD1 TYR A 358 8.177 -5.637 -13.114 1.00 1.07 \ ATOM 61 CD2 TYR A 358 7.045 -7.523 -14.033 1.00 1.07 \ ATOM 62 CE1 TYR A 358 9.341 -6.015 -13.774 1.00 1.07 \ ATOM 63 CE2 TYR A 358 8.190 -7.910 -14.690 1.00 1.07 \ ATOM 64 CZ TYR A 358 9.340 -7.156 -14.561 1.00 1.07 \ ATOM 65 OH TYR A 358 10.482 -7.554 -15.225 1.00 1.07 \ ATOM 66 N ALA A 359 5.760 -4.369 -15.334 1.00 -0.49 \ ATOM 67 CA ALA A 359 5.718 -4.531 -16.778 1.00 -0.49 \ ATOM 68 C ALA A 359 7.151 -4.524 -17.286 1.00 -0.49 \ ATOM 69 O ALA A 359 7.998 -3.784 -16.776 1.00 -0.49 \ ATOM 70 CB ALA A 359 4.900 -3.428 -17.453 1.00 -0.49 \ ATOM 71 N SER A 360 7.388 -5.300 -18.344 1.00 -0.05 \ ATOM 72 CA SER A 360 8.734 -5.514 -18.859 1.00 -0.05 \ ATOM 73 C SER A 360 8.659 -6.013 -20.294 1.00 -0.05 \ ATOM 74 O SER A 360 7.618 -6.492 -20.763 1.00 -0.05 \ ATOM 75 CB SER A 360 9.507 -6.506 -17.994 1.00 -0.05 \ ATOM 76 OG SER A 360 10.425 -7.252 -18.773 1.00 -0.05 \ ATOM 77 N VAL A 361 9.819 -5.960 -20.960 1.00 -0.52 \ ATOM 78 CA VAL A 361 9.827 -5.987 -22.418 1.00 -0.52 \ ATOM 79 C VAL A 361 9.626 -7.418 -22.915 1.00 -0.52 \ ATOM 80 O VAL A 361 9.105 -7.647 -24.013 1.00 -0.52 \ ATOM 81 CB VAL A 361 11.139 -5.385 -22.961 1.00 -0.52 \ ATOM 82 CG1 VAL A 361 11.535 -5.945 -24.368 1.00 -0.52 \ ATOM 83 CG2 VAL A 361 11.246 -3.880 -22.731 1.00 -0.52 \ ATOM 84 N GLU A 362 10.074 -8.386 -22.124 1.00 -1.10 \ ATOM 85 CA GLU A 362 10.066 -9.779 -22.559 1.00 -1.10 \ ATOM 86 C GLU A 362 8.943 -10.600 -21.935 1.00 -1.10 \ ATOM 87 O GLU A 362 8.612 -10.431 -20.761 1.00 -1.10 \ ATOM 88 CB GLU A 362 11.417 -10.436 -22.264 1.00 -1.10 \ ATOM 89 CG GLU A 362 12.616 -9.617 -22.712 1.00 -1.10 \ ATOM 90 CD GLU A 362 13.846 -9.872 -21.863 1.00 -1.10 \ ATOM 91 OE1 GLU A 362 13.908 -10.933 -21.207 1.00 -1.10 \ ATOM 92 OE2 GLU A 362 14.752 -9.012 -21.852 1.00 -1.10 \ ATOM 93 N VAL A 363 8.366 -11.495 -22.731 1.00 -0.52 \ ATOM 94 CA VAL A 363 7.335 -12.404 -22.240 1.00 -0.52 \ ATOM 95 C VAL A 363 7.894 -13.299 -21.146 1.00 -0.52 \ ATOM 96 O VAL A 363 7.204 -13.611 -20.169 1.00 -0.52 \ ATOM 97 CB VAL A 363 6.740 -13.227 -23.399 1.00 -0.52 \ ATOM 98 N SER A 364 9.146 -13.737 -21.291 1.00 -0.27 \ ATOM 99 CA SER A 364 9.717 -14.599 -20.266 1.00 -0.27 \ ATOM 100 C SER A 364 9.901 -13.844 -18.960 1.00 -0.27 \ ATOM 101 O SER A 364 9.719 -14.421 -17.886 1.00 -0.27 \ ATOM 102 CB SER A 364 11.047 -15.176 -20.748 1.00 -0.27 \ ATOM 103 N LYS A 365 10.189 -12.544 -19.035 1.00 -0.79 \ ATOM 104 CA LYS A 365 10.331 -11.743 -17.826 1.00 -0.79 \ ATOM 105 C LYS A 365 8.996 -11.592 -17.096 1.00 -0.79 \ ATOM 106 O LYS A 365 8.937 -11.699 -15.861 1.00 -0.79 \ ATOM 107 CB LYS A 365 10.921 -10.381 -18.184 1.00 -0.79 \ ATOM 108 N LEU A 366 7.903 -11.387 -17.839 1.00 1.47 \ ATOM 109 CA LEU A 366 6.609 -11.241 -17.182 1.00 1.47 \ ATOM 110 C LEU A 366 6.120 -12.578 -16.651 1.00 1.47 \ ATOM 111 O LEU A 366 5.548 -12.641 -15.559 1.00 1.47 \ ATOM 112 CB LEU A 366 5.581 -10.632 -18.138 1.00 1.47 \ ATOM 113 N LYS A 367 6.384 -13.666 -17.379 1.00 -0.54 \ ATOM 114 CA LYS A 367 5.968 -14.984 -16.901 1.00 -0.54 \ ATOM 115 C LYS A 367 6.750 -15.404 -15.657 1.00 -0.54 \ ATOM 116 O LYS A 367 6.184 -16.014 -14.738 1.00 -0.54 \ ATOM 117 CB LYS A 367 6.122 -16.017 -18.017 1.00 -0.54 \ ATOM 118 N ARG A 368 8.044 -15.063 -15.595 1.00 -1.24 \ ATOM 119 CA ARG A 368 8.836 -15.323 -14.394 1.00 -1.24 \ ATOM 120 C ARG A 368 8.331 -14.486 -13.226 1.00 -1.24 \ ATOM 121 O ARG A 368 8.233 -14.970 -12.086 1.00 -1.24 \ ATOM 122 CB ARG A 368 10.313 -15.030 -14.684 1.00 -1.24 \ ATOM 123 CG ARG A 368 11.285 -15.109 -13.488 1.00 -1.24 \ ATOM 124 CD ARG A 368 12.743 -14.713 -13.900 1.00 -1.24 \ ATOM 125 NE ARG A 368 12.960 -13.268 -13.923 1.00 -1.24 \ ATOM 126 CZ ARG A 368 14.055 -12.671 -14.384 1.00 -1.24 \ ATOM 127 NH1 ARG A 368 15.064 -13.382 -14.876 1.00 -1.24 \ ATOM 128 NH2 ARG A 368 14.141 -11.352 -14.353 1.00 -1.24 \ ATOM 129 N HIS A 369 7.944 -13.239 -13.507 1.00 1.93 \ ATOM 130 CA HIS A 369 7.391 -12.391 -12.461 1.00 1.93 \ ATOM 131 C HIS A 369 6.077 -12.955 -11.939 1.00 1.93 \ ATOM 132 O HIS A 369 5.813 -12.937 -10.725 1.00 1.93 \ ATOM 133 CB HIS A 369 7.164 -10.990 -13.026 1.00 1.93 \ ATOM 134 CG HIS A 369 6.336 -10.111 -12.148 1.00 1.93 \ ATOM 135 ND1 HIS A 369 6.834 -9.504 -11.015 1.00 1.93 \ ATOM 136 CD2 HIS A 369 5.025 -9.780 -12.208 1.00 1.93 \ ATOM 137 CE1 HIS A 369 5.874 -8.806 -10.435 1.00 1.93 \ ATOM 138 NE2 HIS A 369 4.766 -8.959 -11.138 1.00 1.93 \ ATOM 139 N ILE A 370 5.279 -13.540 -12.834 1.00 0.23 \ ATOM 140 CA ILE A 370 4.020 -14.131 -12.410 1.00 0.23 \ ATOM 141 C ILE A 370 4.298 -15.360 -11.593 1.00 0.23 \ ATOM 142 O ILE A 370 3.569 -15.655 -10.646 1.00 0.23 \ ATOM 143 CB ILE A 370 3.114 -14.459 -13.612 1.00 0.23 \ ATOM 144 N ARG A 371 5.376 -16.081 -11.907 1.00 -0.67 \ ATOM 145 CA ARG A 371 5.752 -17.172 -11.022 1.00 -0.67 \ ATOM 146 C ARG A 371 6.075 -16.638 -9.637 1.00 -0.67 \ ATOM 147 O ARG A 371 5.816 -17.311 -8.631 1.00 -0.67 \ ATOM 148 CB ARG A 371 6.929 -17.953 -11.593 1.00 -0.67 \ ATOM 149 CG ARG A 371 6.490 -18.963 -12.655 1.00 -0.67 \ ATOM 150 CD ARG A 371 7.537 -20.035 -12.859 1.00 -0.67 \ ATOM 151 NE ARG A 371 8.807 -19.469 -13.296 1.00 -0.67 \ ATOM 152 CZ ARG A 371 9.119 -19.196 -14.558 1.00 -0.67 \ ATOM 153 NH1 ARG A 371 8.238 -19.436 -15.526 1.00 -0.67 \ ATOM 154 NH2 ARG A 371 10.315 -18.680 -14.845 1.00 -0.67 \ ATOM 155 N SER A 372 6.572 -15.405 -9.549 1.00 -0.68 \ ATOM 156 CA SER A 372 6.760 -14.847 -8.214 1.00 -0.68 \ ATOM 157 C SER A 372 5.425 -14.563 -7.537 1.00 -0.68 \ ATOM 158 O SER A 372 5.321 -14.673 -6.311 1.00 -0.68 \ ATOM 159 CB SER A 372 7.615 -13.586 -8.275 1.00 -0.68 \ ATOM 160 OG SER A 372 8.930 -13.896 -8.703 1.00 -0.68 \ ATOM 161 N HIS A 373 4.392 -14.176 -8.305 1.00 0.60 \ ATOM 162 CA HIS A 373 3.078 -13.979 -7.685 1.00 0.60 \ ATOM 163 C HIS A 373 2.410 -15.289 -7.270 1.00 0.60 \ ATOM 164 O HIS A 373 1.894 -15.402 -6.154 1.00 0.60 \ ATOM 165 CB HIS A 373 2.150 -13.212 -8.626 1.00 0.60 \ ATOM 166 CG HIS A 373 2.203 -11.736 -8.433 1.00 0.60 \ ATOM 167 ND1 HIS A 373 2.219 -11.160 -7.181 1.00 0.60 \ ATOM 168 CD2 HIS A 373 2.223 -10.719 -9.320 1.00 0.60 \ ATOM 169 CE1 HIS A 373 2.262 -9.848 -7.306 1.00 0.60 \ ATOM 170 NE2 HIS A 373 2.264 -9.554 -8.594 1.00 0.60 \ ATOM 171 N THR A 374 2.394 -16.277 -8.155 1.00 -0.66 \ ATOM 172 CA THR A 374 1.726 -17.540 -7.874 1.00 -0.66 \ ATOM 173 C THR A 374 2.474 -18.336 -6.812 1.00 -0.66 \ ATOM 174 O THR A 374 1.862 -18.880 -5.886 1.00 -0.66 \ ATOM 175 CB THR A 374 1.578 -18.343 -9.163 1.00 -0.66 \ ATOM 176 OG1 THR A 374 2.869 -18.778 -9.604 1.00 -0.66 \ ATOM 177 CG2 THR A 374 0.950 -17.476 -10.249 1.00 -0.66 \ """, "e5yehA1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5yehA1_csv", state=0, origin=1) cmd.zoom("e5yehA1_csv", animate=-1)