cmd.read_pdbstr("""\ ATOM 1 N PRO C 549 30.053 47.267 -55.138 1.00 -0.22 \ ATOM 2 CA PRO C 549 28.992 48.215 -55.501 1.00 -0.22 \ ATOM 3 C PRO C 549 28.090 48.582 -54.317 1.00 -0.22 \ ATOM 4 O PRO C 549 28.468 48.339 -53.169 1.00 -0.22 \ ATOM 5 CB PRO C 549 28.207 47.464 -56.582 1.00 -0.22 \ ATOM 6 CG PRO C 549 28.506 46.019 -56.342 1.00 -0.22 \ ATOM 7 CD PRO C 549 29.918 45.984 -55.850 1.00 -0.22 \ ATOM 8 N HIS C 550 26.922 49.164 -54.598 1.00 0.56 \ ATOM 9 CA HIS C 550 26.003 49.582 -53.544 1.00 0.56 \ ATOM 10 C HIS C 550 25.495 48.374 -52.765 1.00 0.56 \ ATOM 11 O HIS C 550 24.859 47.480 -53.333 1.00 0.56 \ ATOM 12 CB HIS C 550 24.827 50.357 -54.142 1.00 0.56 \ ATOM 13 CG HIS C 550 25.191 51.712 -54.667 1.00 0.56 \ ATOM 14 ND1 HIS C 550 25.454 52.784 -53.842 1.00 0.56 \ ATOM 15 CD2 HIS C 550 25.320 52.173 -55.934 1.00 0.56 \ ATOM 16 CE1 HIS C 550 25.738 53.845 -54.577 1.00 0.56 \ ATOM 17 NE2 HIS C 550 25.663 53.501 -55.850 1.00 0.56 \ ATOM 18 N PHE C 551 25.767 48.353 -51.463 1.00 -0.93 \ ATOM 19 CA PHE C 551 25.367 47.259 -50.588 1.00 -0.93 \ ATOM 20 C PHE C 551 24.210 47.694 -49.698 1.00 -0.93 \ ATOM 21 O PHE C 551 24.186 48.824 -49.201 1.00 -0.93 \ ATOM 22 CB PHE C 551 26.541 46.789 -49.723 1.00 -0.93 \ ATOM 23 N CYS C 552 23.254 46.789 -49.499 1.00 1.92 \ ATOM 24 CA CYS C 552 22.114 47.041 -48.633 1.00 1.92 \ ATOM 25 C CYS C 552 22.481 46.721 -47.183 1.00 1.92 \ ATOM 26 O CYS C 552 23.602 46.310 -46.873 1.00 1.92 \ ATOM 27 CB CYS C 552 20.904 46.232 -49.099 1.00 1.92 \ ATOM 28 SG CYS C 552 19.372 46.543 -48.177 1.00 1.92 \ ATOM 29 N GLN C 553 21.517 46.904 -46.279 1.00 -0.86 \ ATOM 30 CA GLN C 553 21.745 46.759 -44.845 1.00 -0.86 \ ATOM 31 C GLN C 553 20.834 45.728 -44.196 1.00 -0.86 \ ATOM 32 O GLN C 553 21.309 44.899 -43.410 1.00 -0.86 \ ATOM 33 CB GLN C 553 21.563 48.118 -44.143 1.00 -0.86 \ ATOM 34 CG GLN C 553 22.504 49.213 -44.621 1.00 -0.86 \ ATOM 35 CD GLN C 553 21.764 50.441 -45.117 1.00 -0.86 \ ATOM 36 OE1 GLN C 553 20.535 50.457 -45.178 1.00 -0.86 \ ATOM 37 NE2 GLN C 553 22.513 51.478 -45.477 1.00 -0.86 \ ATOM 38 N ILE C 554 19.534 45.756 -44.505 1.00 -0.72 \ ATOM 39 CA ILE C 554 18.568 44.934 -43.780 1.00 -0.72 \ ATOM 40 C ILE C 554 18.799 43.451 -44.048 1.00 -0.72 \ ATOM 41 O ILE C 554 18.691 42.619 -43.138 1.00 -0.72 \ ATOM 42 CB ILE C 554 17.133 45.358 -44.141 1.00 -0.72 \ ATOM 43 N CYS C 555 19.108 43.093 -45.289 1.00 1.92 \ ATOM 44 CA CYS C 555 19.383 41.706 -45.647 1.00 1.92 \ ATOM 45 C CYS C 555 20.753 41.506 -46.275 1.00 1.92 \ ATOM 46 O CYS C 555 21.375 40.463 -46.054 1.00 1.92 \ ATOM 47 CB CYS C 555 18.297 41.176 -46.596 1.00 1.92 \ ATOM 48 SG CYS C 555 18.044 42.161 -48.092 1.00 1.92 \ ATOM 49 N GLY C 556 21.244 42.473 -47.047 1.00 -0.81 \ ATOM 50 CA GLY C 556 22.572 42.382 -47.621 1.00 -0.81 \ ATOM 51 C GLY C 556 22.621 41.787 -49.015 1.00 -0.81 \ ATOM 52 O GLY C 556 22.891 40.593 -49.180 1.00 -0.81 \ ATOM 53 N LYS C 557 22.366 42.613 -50.029 1.00 0.02 \ ATOM 54 CA LYS C 557 22.441 42.200 -51.423 1.00 0.02 \ ATOM 55 C LYS C 557 23.288 43.198 -52.198 1.00 0.02 \ ATOM 56 O LYS C 557 23.216 44.406 -51.956 1.00 0.02 \ ATOM 57 CB LYS C 557 21.046 42.091 -52.055 1.00 0.02 \ ATOM 58 N THR C 558 24.090 42.689 -53.130 1.00 -0.72 \ ATOM 59 CA THR C 558 24.935 43.533 -53.971 1.00 -0.72 \ ATOM 60 C THR C 558 24.092 44.090 -55.112 1.00 -0.72 \ ATOM 61 O THR C 558 23.620 43.336 -55.971 1.00 -0.72 \ ATOM 62 CB THR C 558 26.127 42.744 -54.506 1.00 -0.72 \ ATOM 63 OG1 THR C 558 26.975 42.357 -53.418 1.00 -0.72 \ ATOM 64 N PHE C 559 23.908 45.407 -55.127 1.00 1.25 \ ATOM 65 CA PHE C 559 23.065 46.071 -56.109 1.00 1.25 \ ATOM 66 C PHE C 559 23.899 46.874 -57.099 1.00 1.25 \ ATOM 67 O PHE C 559 25.066 47.194 -56.858 1.00 1.25 \ ATOM 68 CB PHE C 559 22.042 46.989 -55.429 1.00 1.25 \ ATOM 69 CG PHE C 559 20.682 46.374 -55.289 1.00 1.25 \ ATOM 70 CD1 PHE C 559 20.264 45.849 -54.078 1.00 1.25 \ ATOM 71 CD2 PHE C 559 19.827 46.307 -56.377 1.00 1.25 \ ATOM 72 CE1 PHE C 559 19.013 45.279 -53.953 1.00 1.25 \ ATOM 73 CE2 PHE C 559 18.577 45.738 -56.258 1.00 1.25 \ ATOM 74 CZ PHE C 559 18.170 45.222 -55.046 1.00 1.25 \ ATOM 75 N LYS C 560 23.265 47.205 -58.224 1.00 -0.66 \ ATOM 76 CA LYS C 560 23.918 47.907 -59.321 1.00 -0.66 \ ATOM 77 C LYS C 560 23.894 49.417 -59.111 1.00 -0.66 \ ATOM 78 O LYS C 560 24.903 50.010 -58.718 1.00 -0.66 \ ATOM 79 CB LYS C 560 23.248 47.541 -60.649 1.00 -0.66 \ ATOM 80 CG LYS C 560 21.856 46.929 -60.493 1.00 -0.66 \ ATOM 81 CD LYS C 560 21.877 45.422 -60.726 1.00 -0.66 \ ATOM 82 CE LYS C 560 20.726 44.720 -60.009 1.00 -0.66 \ ATOM 83 NZ LYS C 560 19.380 45.250 -60.369 1.00 -0.66 \ ATOM 84 N ALA C 561 22.750 50.044 -59.364 1.00 -0.79 \ ATOM 85 CA ALA C 561 22.618 51.491 -59.289 1.00 -0.79 \ ATOM 86 C ALA C 561 22.010 51.920 -57.959 1.00 -0.79 \ ATOM 87 O ALA C 561 21.446 51.116 -57.213 1.00 -0.79 \ ATOM 88 CB ALA C 561 21.764 52.016 -60.445 1.00 -0.79 \ ATOM 89 N VAL C 562 22.131 53.219 -57.673 1.00 -0.72 \ ATOM 90 CA VAL C 562 21.592 53.761 -56.433 1.00 -0.72 \ ATOM 91 C VAL C 562 20.075 53.881 -56.479 1.00 -0.72 \ ATOM 92 O VAL C 562 19.428 53.868 -55.425 1.00 -0.72 \ ATOM 93 CB VAL C 562 22.231 55.127 -56.120 1.00 -0.72 \ ATOM 94 N GLU C 563 19.486 53.995 -57.672 1.00 -0.74 \ ATOM 95 CA GLU C 563 18.036 54.070 -57.803 1.00 -0.74 \ ATOM 96 C GLU C 563 17.371 52.699 -57.811 1.00 -0.74 \ ATOM 97 O GLU C 563 16.186 52.598 -57.474 1.00 -0.74 \ ATOM 98 CB GLU C 563 17.657 54.836 -59.076 1.00 -0.74 \ ATOM 99 CG GLU C 563 16.194 55.257 -59.142 1.00 -0.74 \ ATOM 100 CD GLU C 563 15.816 56.236 -58.045 1.00 -0.74 \ ATOM 101 OE1 GLU C 563 16.697 56.996 -57.590 1.00 -0.74 \ ATOM 102 OE2 GLU C 563 14.636 56.243 -57.634 1.00 -0.74 \ ATOM 103 N GLN C 564 18.105 51.645 -58.182 1.00 -0.74 \ ATOM 104 CA GLN C 564 17.588 50.285 -58.061 1.00 -0.74 \ ATOM 105 C GLN C 564 17.529 49.817 -56.614 1.00 -0.74 \ ATOM 106 O GLN C 564 16.852 48.825 -56.324 1.00 -0.74 \ ATOM 107 CB GLN C 564 18.445 49.322 -58.882 1.00 -0.74 \ ATOM 108 CG GLN C 564 17.976 49.150 -60.315 1.00 -0.74 \ ATOM 109 CD GLN C 564 17.146 47.894 -60.514 1.00 -0.74 \ ATOM 110 OE1 GLN C 564 17.454 46.837 -59.959 1.00 -0.74 \ ATOM 111 NE2 GLN C 564 16.091 48.003 -61.311 1.00 -0.74 \ ATOM 112 N LEU C 565 18.214 50.512 -55.707 1.00 0.60 \ ATOM 113 CA LEU C 565 18.239 50.150 -54.297 1.00 0.60 \ ATOM 114 C LEU C 565 17.134 50.827 -53.496 1.00 0.60 \ ATOM 115 O LEU C 565 16.619 50.233 -52.541 1.00 0.60 \ ATOM 116 CB LEU C 565 19.607 50.499 -53.703 1.00 0.60 \ ATOM 117 CG LEU C 565 19.873 50.147 -52.239 1.00 0.60 \ ATOM 118 CD1 LEU C 565 19.652 48.666 -51.990 1.00 0.60 \ ATOM 119 CD2 LEU C 565 21.284 50.553 -51.839 1.00 0.60 \ ATOM 120 N ARG C 566 16.760 52.056 -53.864 1.00 -0.65 \ ATOM 121 CA ARG C 566 15.676 52.741 -53.166 1.00 -0.65 \ ATOM 122 C ARG C 566 14.347 52.029 -53.381 1.00 -0.65 \ ATOM 123 O ARG C 566 13.563 51.865 -52.438 1.00 -0.65 \ ATOM 124 CB ARG C 566 15.587 54.197 -53.627 1.00 -0.65 \ ATOM 125 N VAL C 567 14.078 51.591 -54.615 1.00 -0.68 \ ATOM 126 CA VAL C 567 12.853 50.854 -54.896 1.00 -0.68 \ ATOM 127 C VAL C 567 12.880 49.470 -54.264 1.00 -0.68 \ ATOM 128 O VAL C 567 11.827 48.840 -54.115 1.00 -0.68 \ ATOM 129 CB VAL C 567 12.615 50.748 -56.415 1.00 -0.68 \ ATOM 130 CG1 VAL C 567 12.633 52.127 -57.056 1.00 -0.68 \ ATOM 131 CG2 VAL C 567 13.648 49.838 -57.056 1.00 -0.68 \ ATOM 132 N HIS C 568 14.059 48.982 -53.880 1.00 1.92 \ ATOM 133 CA HIS C 568 14.182 47.680 -53.235 1.00 1.92 \ ATOM 134 C HIS C 568 13.956 47.777 -51.729 1.00 1.92 \ ATOM 135 O HIS C 568 13.014 47.185 -51.193 1.00 1.92 \ ATOM 136 CB HIS C 568 15.559 47.077 -53.526 1.00 1.92 \ ATOM 137 CG HIS C 568 15.828 45.808 -52.779 1.00 1.92 \ ATOM 138 ND1 HIS C 568 15.502 44.566 -53.279 1.00 1.92 \ ATOM 139 CD2 HIS C 568 16.387 45.589 -51.564 1.00 1.92 \ ATOM 140 CE1 HIS C 568 15.852 43.636 -52.408 1.00 1.92 \ ATOM 141 NE2 HIS C 568 16.390 44.231 -51.358 1.00 1.92 \ ATOM 142 N VAL C 569 14.821 48.518 -51.029 1.00 -0.83 \ ATOM 143 CA VAL C 569 14.689 48.643 -49.580 1.00 -0.83 \ ATOM 144 C VAL C 569 13.562 49.578 -49.178 1.00 -0.83 \ ATOM 145 O VAL C 569 13.302 49.737 -47.978 1.00 -0.83 \ ATOM 146 CB VAL C 569 16.023 49.106 -48.961 1.00 -0.83 \ ATOM 147 N ARG C 570 12.885 50.204 -50.143 1.00 -0.32 \ ATOM 148 CA ARG C 570 11.685 50.970 -49.830 1.00 -0.32 \ ATOM 149 C ARG C 570 10.502 50.048 -49.564 1.00 -0.32 \ ATOM 150 O ARG C 570 9.730 50.278 -48.627 1.00 -0.32 \ ATOM 151 CB ARG C 570 11.366 51.941 -50.968 1.00 -0.32 \ ATOM 152 N ARG C 571 10.346 48.999 -50.374 1.00 -0.43 \ ATOM 153 CA ARG C 571 9.336 47.989 -50.087 1.00 -0.43 \ ATOM 154 C ARG C 571 9.745 47.085 -48.933 1.00 -0.43 \ ATOM 155 O ARG C 571 8.942 46.252 -48.500 1.00 -0.43 \ ATOM 156 CB ARG C 571 9.049 47.156 -51.342 1.00 -0.43 \ ATOM 157 CG ARG C 571 10.136 46.151 -51.696 1.00 -0.43 \ ATOM 158 CD ARG C 571 10.029 45.713 -53.148 1.00 -0.43 \ ATOM 159 NE ARG C 571 9.969 44.264 -53.289 1.00 -0.43 \ ATOM 160 CZ ARG C 571 11.035 43.481 -53.431 1.00 -0.43 \ ATOM 161 NH1 ARG C 571 10.893 42.163 -53.559 1.00 -0.43 \ ATOM 162 NH2 ARG C 571 12.248 44.016 -53.446 1.00 -0.43 \ ATOM 163 N HIS C 572 10.971 47.236 -48.427 1.00 1.92 \ ATOM 164 CA HIS C 572 11.396 46.487 -47.251 1.00 1.92 \ ATOM 165 C HIS C 572 10.666 46.951 -45.998 1.00 1.92 \ ATOM 166 O HIS C 572 10.536 46.186 -45.035 1.00 1.92 \ ATOM 167 CB HIS C 572 12.905 46.634 -47.072 1.00 1.92 \ ATOM 168 CG HIS C 572 13.591 45.377 -46.642 1.00 1.92 \ ATOM 169 ND1 HIS C 572 12.940 44.361 -45.976 1.00 1.92 \ ATOM 170 CD2 HIS C 572 14.873 44.969 -46.792 1.00 1.92 \ ATOM 171 CE1 HIS C 572 13.794 43.382 -45.732 1.00 1.92 \ ATOM 172 NE2 HIS C 572 14.973 43.726 -46.216 1.00 1.92 \ ATOM 173 N LYS C 573 10.196 48.195 -45.985 1.00 0.37 \ ATOM 174 CA LYS C 573 9.453 48.751 -44.866 1.00 0.37 \ ATOM 175 C LYS C 573 8.005 48.967 -45.284 1.00 0.37 \ ATOM 176 O LYS C 573 7.744 49.583 -46.325 1.00 0.37 \ ATOM 177 CB LYS C 573 10.072 50.069 -44.395 1.00 0.37 \ """, "e5yj3C2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5yj3C2_csv", state=0, origin=1) cmd.zoom("e5yj3C2_csv", animate=-1)