cmd.read_pdbstr("""\ ATOM 1 N HIS D 347 -9.440 48.750-225.421 1.00 -1.00 \ ATOM 2 CA HIS D 347 -10.612 48.365-224.647 1.00 -1.00 \ ATOM 3 C HIS D 347 -11.912 48.906-225.221 1.00 -1.00 \ ATOM 4 O HIS D 347 -12.986 48.422-224.846 1.00 -1.00 \ ATOM 5 CB HIS D 347 -10.470 48.846-223.200 1.00 -1.00 \ ATOM 6 CG HIS D 347 -9.309 48.244-222.471 1.00 -1.00 \ ATOM 7 ND1 HIS D 347 -9.162 46.885-222.299 1.00 -1.00 \ ATOM 8 CD2 HIS D 347 -8.246 48.818-221.859 1.00 -1.00 \ ATOM 9 CE1 HIS D 347 -8.055 46.646-221.618 1.00 -1.00 \ ATOM 10 NE2 HIS D 347 -7.482 47.802-221.338 1.00 -1.00 \ ATOM 11 N THR D 348 -11.846 49.891-226.110 1.00 -1.00 \ ATOM 12 CA THR D 348 -13.053 50.467-226.678 1.00 -1.00 \ ATOM 13 C THR D 348 -13.669 49.518-227.702 1.00 -1.00 \ ATOM 14 O THR D 348 -13.019 48.601-228.211 1.00 -1.00 \ ATOM 15 CB THR D 348 -12.757 51.821-227.324 1.00 -1.00 \ ATOM 16 OG1 THR D 348 -11.819 51.647-228.392 1.00 -1.00 \ ATOM 17 CG2 THR D 348 -12.178 52.785-226.297 1.00 -1.00 \ ATOM 18 N GLY D 349 -14.944 49.753-227.998 1.00 -1.00 \ ATOM 19 CA GLY D 349 -15.660 48.879-228.910 1.00 -1.00 \ ATOM 20 C GLY D 349 -15.123 48.979-230.327 1.00 -1.00 \ ATOM 21 O GLY D 349 -14.739 50.051-230.799 1.00 -1.00 \ ATOM 22 N GLU D 350 -15.102 47.840-231.013 1.00 -1.00 \ ATOM 23 CA GLU D 350 -14.583 47.785-232.370 1.00 -1.00 \ ATOM 24 C GLU D 350 -15.555 48.439-233.351 1.00 -1.00 \ ATOM 25 O GLU D 350 -16.747 48.604-233.078 1.00 -1.00 \ ATOM 26 CB GLU D 350 -14.321 46.337-232.785 1.00 -1.00 \ ATOM 27 N LYS D 351 -15.019 48.817-234.515 1.00 -1.00 \ ATOM 28 CA LYS D 351 -15.795 49.363-235.626 1.00 -1.00 \ ATOM 29 C LYS D 351 -15.515 48.496-236.848 1.00 -1.00 \ ATOM 30 O LYS D 351 -14.701 48.861-237.710 1.00 -1.00 \ ATOM 31 CB LYS D 351 -15.449 50.827-235.891 1.00 -1.00 \ ATOM 32 CG LYS D 351 -15.808 51.771-234.753 1.00 -1.00 \ ATOM 33 CD LYS D 351 -15.461 53.209-235.103 1.00 -1.00 \ ATOM 34 CE LYS D 351 -15.862 54.159-233.987 1.00 -1.00 \ ATOM 35 NZ LYS D 351 -15.517 55.571-234.310 1.00 -1.00 \ ATOM 36 N PRO D 352 -16.172 47.338-236.957 1.00 1.49 \ ATOM 37 CA PRO D 352 -15.826 46.386-238.021 1.00 1.49 \ ATOM 38 C PRO D 352 -16.389 46.729-239.391 1.00 1.49 \ ATOM 39 O PRO D 352 -16.013 46.070-240.370 1.00 1.49 \ ATOM 40 CB PRO D 352 -16.423 45.070-237.506 1.00 1.49 \ ATOM 41 CG PRO D 352 -17.604 45.504-236.705 1.00 1.49 \ ATOM 42 CD PRO D 352 -17.216 46.812-236.058 1.00 1.49 \ ATOM 43 N TYR D 353 -17.268 47.721-239.501 1.00 0.81 \ ATOM 44 CA TYR D 353 -17.925 48.050-240.765 1.00 0.81 \ ATOM 45 C TYR D 353 -17.244 49.276-241.361 1.00 0.81 \ ATOM 46 O TYR D 353 -17.461 50.404-240.910 1.00 0.81 \ ATOM 47 CB TYR D 353 -19.418 48.274-240.552 1.00 0.81 \ ATOM 48 CG TYR D 353 -20.120 47.060-239.990 1.00 0.81 \ ATOM 49 CD1 TYR D 353 -20.467 45.995-240.810 1.00 0.81 \ ATOM 50 CD2 TYR D 353 -20.426 46.972-238.638 1.00 0.81 \ ATOM 51 CE1 TYR D 353 -21.102 44.878-240.302 1.00 0.81 \ ATOM 52 CE2 TYR D 353 -21.063 45.860-238.120 1.00 0.81 \ ATOM 53 CZ TYR D 353 -21.399 44.816-238.957 1.00 0.81 \ ATOM 54 OH TYR D 353 -22.033 43.706-238.448 1.00 0.81 \ ATOM 55 N GLN D 354 -16.420 49.052-242.380 1.00 -0.83 \ ATOM 56 CA GLN D 354 -15.654 50.113-243.016 1.00 -0.83 \ ATOM 57 C GLN D 354 -16.263 50.466-244.367 1.00 -0.83 \ ATOM 58 O GLN D 354 -16.724 49.588-245.102 1.00 -0.83 \ ATOM 59 CB GLN D 354 -14.191 49.698-243.194 1.00 -0.83 \ ATOM 60 CG GLN D 354 -13.292 50.805-243.725 1.00 -0.83 \ ATOM 61 CD GLN D 354 -11.823 50.434-243.683 1.00 -0.83 \ ATOM 62 OE1 GLN D 354 -11.464 49.260-243.773 1.00 -0.83 \ ATOM 63 NE2 GLN D 354 -10.965 51.437-243.537 1.00 -0.83 \ ATOM 64 N CYS D 355 -16.263 51.757-244.685 1.00 1.49 \ ATOM 65 CA CYS D 355 -16.786 52.226-245.959 1.00 1.49 \ ATOM 66 C CYS D 355 -15.793 51.923-247.074 1.00 1.49 \ ATOM 67 O CYS D 355 -14.597 52.201-246.946 1.00 1.49 \ ATOM 68 CB CYS D 355 -17.073 53.724-245.896 1.00 1.49 \ ATOM 69 SG CYS D 355 -17.803 54.390-247.402 1.00 1.49 \ ATOM 70 N ASP D 356 -16.293 51.355-248.170 1.00 -1.60 \ ATOM 71 CA ASP D 356 -15.460 50.960-249.296 1.00 -1.60 \ ATOM 72 C ASP D 356 -15.588 51.909-250.479 1.00 -1.60 \ ATOM 73 O ASP D 356 -15.150 51.572-251.583 1.00 -1.60 \ ATOM 74 CB ASP D 356 -15.797 49.528-249.717 1.00 -1.60 \ ATOM 75 CG ASP D 356 -17.265 49.350-250.059 1.00 -1.60 \ ATOM 76 OD1 ASP D 356 -17.626 48.281-250.594 1.00 -1.60 \ ATOM 77 OD2 ASP D 356 -18.058 50.281-249.804 1.00 -1.60 \ ATOM 78 N PHE D 357 -16.178 53.082-250.272 1.00 -1.00 \ ATOM 79 CA PHE D 357 -16.191 54.111-251.299 1.00 -1.00 \ ATOM 80 C PHE D 357 -14.792 54.695-251.466 1.00 -1.00 \ ATOM 81 O PHE D 357 -14.007 54.760-250.516 1.00 -1.00 \ ATOM 82 CB PHE D 357 -17.192 55.209-250.938 1.00 -1.00 \ ATOM 83 CG PHE D 357 -17.613 56.056-252.106 1.00 -1.00 \ ATOM 84 CD1 PHE D 357 -18.566 55.597-252.999 1.00 -1.00 \ ATOM 85 CD2 PHE D 357 -17.071 57.317-252.302 1.00 -1.00 \ ATOM 86 CE1 PHE D 357 -18.964 56.371-254.071 1.00 -1.00 \ ATOM 87 CE2 PHE D 357 -17.466 58.098-253.373 1.00 -1.00 \ ATOM 88 CZ PHE D 357 -18.414 57.622-254.258 1.00 -1.00 \ ATOM 89 N LYS D 358 -14.482 55.115-252.691 1.00 -1.00 \ ATOM 90 CA LYS D 358 -13.134 55.567-253.015 1.00 -1.00 \ ATOM 91 C LYS D 358 -12.698 56.715-252.112 1.00 -1.00 \ ATOM 92 O LYS D 358 -13.415 57.708-251.956 1.00 -1.00 \ ATOM 93 CB LYS D 358 -13.070 55.996-254.480 1.00 -1.00 \ ATOM 94 CG LYS D 358 -11.753 56.633-254.888 1.00 -1.00 \ ATOM 95 CD LYS D 358 -11.806 57.121-256.328 1.00 -1.00 \ ATOM 96 CE LYS D 358 -10.556 57.900-256.692 1.00 -1.00 \ ATOM 97 NZ LYS D 358 -10.627 58.445-258.075 1.00 -1.00 \ ATOM 98 N ASP D 359 -11.517 56.562-251.510 1.00 -1.23 \ ATOM 99 CA ASP D 359 -10.843 57.552-250.669 1.00 -1.23 \ ATOM 100 C ASP D 359 -11.563 57.831-249.355 1.00 -1.23 \ ATOM 101 O ASP D 359 -11.170 58.754-248.632 1.00 -1.23 \ ATOM 102 CB ASP D 359 -10.618 58.875-251.412 1.00 -1.23 \ ATOM 103 CG ASP D 359 -9.669 58.729-252.585 1.00 -1.23 \ ATOM 104 OD1 ASP D 359 -8.759 57.875-252.511 1.00 -1.23 \ ATOM 105 OD2 ASP D 359 -9.832 59.466-253.581 1.00 -1.23 \ ATOM 106 N CYS D 360 -12.596 57.066-249.014 1.00 1.49 \ ATOM 107 CA CYS D 360 -13.257 57.189-247.721 1.00 1.49 \ ATOM 108 C CYS D 360 -12.798 56.056-246.814 1.00 1.49 \ ATOM 109 O CYS D 360 -12.862 54.882-247.196 1.00 1.49 \ ATOM 110 CB CYS D 360 -14.779 57.166-247.864 1.00 1.49 \ ATOM 111 SG CYS D 360 -15.656 57.440-246.300 1.00 1.49 \ ATOM 112 N GLU D 361 -12.334 56.410-245.618 1.00 0.46 \ ATOM 113 CA GLU D 361 -11.815 55.441-244.663 1.00 0.46 \ ATOM 114 C GLU D 361 -12.662 55.349-243.401 1.00 0.46 \ ATOM 115 O GLU D 361 -12.196 54.803-242.395 1.00 0.46 \ ATOM 116 CB GLU D 361 -10.369 55.785-244.299 1.00 0.46 \ ATOM 117 N ARG D 362 -13.890 55.863-243.427 1.00 0.50 \ ATOM 118 CA ARG D 362 -14.723 55.868-242.232 1.00 0.50 \ ATOM 119 C ARG D 362 -15.107 54.451-241.827 1.00 0.50 \ ATOM 120 O ARG D 362 -15.396 53.598-242.671 1.00 0.50 \ ATOM 121 CB ARG D 362 -15.985 56.700-242.456 1.00 0.50 \ ATOM 122 CG ARG D 362 -15.784 58.201-242.334 1.00 0.50 \ ATOM 123 CD ARG D 362 -17.044 58.871-241.800 1.00 0.50 \ ATOM 124 NE ARG D 362 -17.184 58.707-240.355 1.00 0.50 \ ATOM 125 CZ ARG D 362 -17.039 59.692-239.473 1.00 0.50 \ ATOM 126 NH1 ARG D 362 -16.760 60.921-239.887 1.00 0.50 \ ATOM 127 NH2 ARG D 362 -17.181 59.452-238.176 1.00 0.50 \ ATOM 128 N ARG D 363 -15.109 54.208-240.519 1.00 -0.58 \ ATOM 129 CA ARG D 363 -15.514 52.936-239.944 1.00 -0.58 \ ATOM 130 C ARG D 363 -16.648 53.172-238.956 1.00 -0.58 \ ATOM 131 O ARG D 363 -16.739 54.237-238.338 1.00 -0.58 \ ATOM 132 CB ARG D 363 -14.340 52.246-239.240 1.00 -0.58 \ ATOM 133 CG ARG D 363 -13.078 52.154-240.084 1.00 -0.58 \ ATOM 134 CD ARG D 363 -11.969 51.441-239.331 1.00 -0.58 \ ATOM 135 NE ARG D 363 -12.336 50.066-239.004 1.00 -0.58 \ ATOM 136 CZ ARG D 363 -12.012 49.009-239.743 1.00 -0.58 \ ATOM 137 NH1 ARG D 363 -11.305 49.163-240.854 1.00 -0.58 \ ATOM 138 NH2 ARG D 363 -12.393 47.796-239.367 1.00 -0.58 \ ATOM 139 N PHE D 364 -17.516 52.172-238.810 1.00 1.08 \ ATOM 140 CA PHE D 364 -18.696 52.305-237.968 1.00 1.08 \ ATOM 141 C PHE D 364 -18.881 51.053-237.124 1.00 1.08 \ ATOM 142 O PHE D 364 -18.473 49.955-237.511 1.00 1.08 \ ATOM 143 CB PHE D 364 -19.952 52.570-238.810 1.00 1.08 \ ATOM 144 CG PHE D 364 -19.902 53.862-239.571 1.00 1.08 \ ATOM 145 CD1 PHE D 364 -20.396 55.029-239.012 1.00 1.08 \ ATOM 146 CD2 PHE D 364 -19.347 53.915-240.840 1.00 1.08 \ ATOM 147 CE1 PHE D 364 -20.343 56.222-239.706 1.00 1.08 \ ATOM 148 CE2 PHE D 364 -19.293 55.106-241.537 1.00 1.08 \ ATOM 149 CZ PHE D 364 -19.789 56.261-240.968 1.00 1.08 \ ATOM 150 N SER D 365 -19.509 51.234-235.960 1.00 -0.52 \ ATOM 151 CA SER D 365 -19.736 50.111-235.058 1.00 -0.52 \ ATOM 152 C SER D 365 -20.831 49.185-235.569 1.00 -0.52 \ ATOM 153 O SER D 365 -20.790 47.977-235.307 1.00 -0.52 \ ATOM 154 CB SER D 365 -20.091 50.621-233.661 1.00 -0.52 \ ATOM 155 OG SER D 365 -19.045 51.413-233.129 1.00 -0.52 \ ATOM 156 N ARG D 366 -21.815 49.722-236.287 1.00 -0.67 \ ATOM 157 CA ARG D 366 -22.960 48.948-236.743 1.00 -0.67 \ ATOM 158 C ARG D 366 -23.144 49.134-238.242 1.00 -0.67 \ ATOM 159 O ARG D 366 -22.809 50.183-238.801 1.00 -0.67 \ ATOM 160 CB ARG D 366 -24.240 49.353-235.996 1.00 -0.67 \ ATOM 161 CG ARG D 366 -24.008 49.699-234.532 1.00 -0.67 \ ATOM 162 CD ARG D 366 -25.301 49.761-233.737 1.00 -0.67 \ ATOM 163 NE ARG D 366 -26.326 50.565-234.394 1.00 -0.67 \ ATOM 164 CZ ARG D 366 -27.340 51.143-233.758 1.00 -0.67 \ ATOM 165 NH1 ARG D 366 -27.457 51.020-232.442 1.00 -0.67 \ ATOM 166 NH2 ARG D 366 -28.232 51.854-234.434 1.00 -0.67 \ ATOM 167 N SER D 367 -23.688 48.099-238.890 1.00 -0.24 \ ATOM 168 CA SER D 367 -23.843 48.134-240.341 1.00 -0.24 \ ATOM 169 C SER D 367 -24.877 49.163-240.777 1.00 -0.24 \ ATOM 170 O SER D 367 -24.739 49.756-241.853 1.00 -0.24 \ ATOM 171 CB SER D 367 -24.226 46.751-240.865 1.00 -0.24 \ ATOM 172 OG SER D 367 -25.534 46.392-240.453 1.00 -0.24 \ ATOM 173 N ASP D 368 -25.918 49.386-239.970 1.00 -0.13 \ ATOM 174 CA ASP D 368 -26.931 50.365-240.347 1.00 -0.13 \ ATOM 175 C ASP D 368 -26.376 51.783-240.312 1.00 -0.13 \ ATOM 176 O ASP D 368 -26.849 52.651-241.055 1.00 -0.13 \ ATOM 177 CB ASP D 368 -28.159 50.238-239.442 1.00 -0.13 \ ATOM 178 CG ASP D 368 -27.873 50.622-238.002 1.00 -0.13 \ ATOM 179 OD1 ASP D 368 -26.711 50.505-237.566 1.00 -0.13 \ ATOM 180 OD2 ASP D 368 -28.820 51.038-237.301 1.00 -0.13 \ ATOM 181 N GLN D 369 -25.379 52.037-239.462 1.00 -0.96 \ ATOM 182 CA GLN D 369 -24.710 53.333-239.480 1.00 -0.96 \ ATOM 183 C GLN D 369 -23.886 53.499-240.749 1.00 -0.96 \ ATOM 184 O GLN D 369 -23.810 54.598-241.310 1.00 -0.96 \ ATOM 185 CB GLN D 369 -23.825 53.487-238.243 1.00 -0.96 \ ATOM 186 CG GLN D 369 -24.576 53.439-236.924 1.00 -0.96 \ ATOM 187 CD GLN D 369 -23.646 53.278-235.737 1.00 -0.96 \ ATOM 188 OE1 GLN D 369 -22.501 52.849-235.886 1.00 -0.96 \ ATOM 189 NE2 GLN D 369 -24.134 53.625-234.551 1.00 -0.96 \ ATOM 190 N LEU D 370 -23.261 52.416-241.215 1.00 0.73 \ ATOM 191 CA LEU D 370 -22.522 52.471-242.471 1.00 0.73 \ ATOM 192 C LEU D 370 -23.460 52.704-243.647 1.00 0.73 \ ATOM 193 O LEU D 370 -23.172 53.525-244.526 1.00 0.73 \ ATOM 194 CB LEU D 370 -21.722 51.183-242.664 1.00 0.73 \ ATOM 195 CG LEU D 370 -21.021 51.014-244.014 1.00 0.73 \ ATOM 196 CD1 LEU D 370 -20.042 52.152-244.262 1.00 0.73 \ ATOM 197 CD2 LEU D 370 -20.314 49.669-244.093 1.00 0.73 \ ATOM 198 N LYS D 371 -24.592 51.995-243.676 1.00 -1.04 \ ATOM 199 CA LYS D 371 -25.548 52.166-244.764 1.00 -1.04 \ ATOM 200 C LYS D 371 -26.083 53.591-244.810 1.00 -1.04 \ ATOM 201 O LYS D 371 -26.196 54.186-245.888 1.00 -1.04 \ ATOM 202 CB LYS D 371 -26.694 51.165-244.615 1.00 -1.04 \ ATOM 203 CG LYS D 371 -26.263 49.711-244.728 1.00 -1.04 \ ATOM 204 CD LYS D 371 -25.656 49.429-246.090 1.00 -1.04 \ ATOM 205 CE LYS D 371 -25.207 47.984-246.215 1.00 -1.04 \ ATOM 206 NZ LYS D 371 -24.568 47.735-247.535 1.00 -1.04 \ ATOM 207 N ARG D 372 -26.415 54.157-243.647 1.00 -1.23 \ ATOM 208 CA ARG D 372 -26.870 55.542-243.602 1.00 -1.23 \ ATOM 209 C ARG D 372 -25.777 56.492-244.076 1.00 -1.23 \ ATOM 210 O ARG D 372 -26.051 57.449-244.810 1.00 -1.23 \ ATOM 211 CB ARG D 372 -27.317 55.896-242.183 1.00 -1.23 \ ATOM 212 CG ARG D 372 -27.854 57.308-242.028 1.00 -1.23 \ ATOM 213 CD ARG D 372 -28.223 57.597-240.581 1.00 -1.23 \ ATOM 214 NE ARG D 372 -27.059 57.514-239.700 1.00 -1.23 \ ATOM 215 CZ ARG D 372 -27.104 57.664-238.380 1.00 -1.23 \ ATOM 216 NH1 ARG D 372 -28.260 57.905-237.774 1.00 -1.23 \ ATOM 217 NH2 ARG D 372 -25.992 57.571-237.666 1.00 -1.23 \ ATOM 218 N HIS D 373 -24.530 56.233-243.674 1.00 1.49 \ ATOM 219 CA HIS D 373 -23.417 57.083-244.083 1.00 1.49 \ ATOM 220 C HIS D 373 -23.227 57.070-245.594 1.00 1.49 \ ATOM 221 O HIS D 373 -22.968 58.115-246.202 1.00 1.49 \ ATOM 222 CB HIS D 373 -22.134 56.630-243.388 1.00 1.49 \ ATOM 223 CG HIS D 373 -20.882 57.038-244.104 1.00 1.49 \ ATOM 224 ND1 HIS D 373 -20.307 58.281-243.949 1.00 1.49 \ ATOM 225 CD2 HIS D 373 -20.099 56.368-244.982 1.00 1.49 \ ATOM 226 CE1 HIS D 373 -19.223 58.359-244.699 1.00 1.49 \ ATOM 227 NE2 HIS D 373 -19.074 57.212-245.337 1.00 1.49 \ ATOM 228 N GLN D 374 -23.345 55.896-246.218 1.00 -0.83 \ ATOM 229 CA GLN D 374 -23.075 55.790-247.647 1.00 -0.83 \ ATOM 230 C GLN D 374 -24.114 56.503-248.502 1.00 -0.83 \ ATOM 231 O GLN D 374 -23.895 56.653-249.710 1.00 -0.83 \ ATOM 232 CB GLN D 374 -22.965 54.318-248.047 1.00 -0.83 \ ATOM 233 CG GLN D 374 -21.749 53.630-247.438 1.00 -0.83 \ ATOM 234 CD GLN D 374 -21.415 52.310-248.101 1.00 -0.83 \ ATOM 235 OE1 GLN D 374 -20.246 52.008-248.348 1.00 -0.83 \ ATOM 236 NE2 GLN D 374 -22.437 51.513-248.387 1.00 -0.83 \ ATOM 237 N ARG D 375 -25.227 56.950-247.914 1.00 -0.14 \ ATOM 238 CA ARG D 375 -26.131 57.844-248.629 1.00 -0.14 \ ATOM 239 C ARG D 375 -25.459 59.163-248.982 1.00 -0.14 \ ATOM 240 O ARG D 375 -25.890 59.833-249.927 1.00 -0.14 \ ATOM 241 CB ARG D 375 -27.390 58.110-247.801 1.00 -0.14 \ ATOM 242 CG ARG D 375 -28.218 56.873-247.503 1.00 -0.14 \ ATOM 243 CD ARG D 375 -29.359 57.195-246.551 1.00 -0.14 \ ATOM 244 NE ARG D 375 -30.041 55.987-246.097 1.00 -0.14 \ ATOM 245 CZ ARG D 375 -30.900 55.954-245.085 1.00 -0.14 \ ATOM 246 NH1 ARG D 375 -31.182 57.066-244.419 1.00 -0.14 \ ATOM 247 NH2 ARG D 375 -31.475 54.812-244.736 1.00 -0.14 \ """, "e6b0oA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6b0oA2_csv", state=0, origin=1) cmd.zoom("e6b0oA2_csv", animate=-1)