cmd.read_pdbstr("""\ ATOM 1 N HIS D 405 -44.490 72.185-240.787 1.00 -1.00 \ ATOM 2 CA HIS D 405 -45.773 72.357-241.456 1.00 -1.00 \ ATOM 3 C HIS D 405 -46.937 72.185-240.486 1.00 -1.00 \ ATOM 4 O HIS D 405 -47.869 72.994-240.475 1.00 -1.00 \ ATOM 5 CB HIS D 405 -45.913 71.360-242.611 1.00 -1.00 \ ATOM 6 CG HIS D 405 -44.896 71.536-243.696 1.00 -1.00 \ ATOM 7 ND1 HIS D 405 -44.726 72.725-244.371 1.00 -1.00 \ ATOM 8 CD2 HIS D 405 -44.009 70.667-244.234 1.00 -1.00 \ ATOM 9 CE1 HIS D 405 -43.770 72.583-245.273 1.00 -1.00 \ ATOM 10 NE2 HIS D 405 -43.319 71.343-245.210 1.00 -1.00 \ ATOM 11 N THR D 406 -46.892 71.134-239.666 1.00 -1.00 \ ATOM 12 CA THR D 406 -48.000 70.814-238.777 1.00 -1.00 \ ATOM 13 C THR D 406 -48.047 71.699-237.540 1.00 -1.00 \ ATOM 14 O THR D 406 -49.099 71.786-236.898 1.00 -1.00 \ ATOM 15 CB THR D 406 -47.918 69.349-238.344 1.00 -1.00 \ ATOM 16 OG1 THR D 406 -46.742 69.149-237.551 1.00 -1.00 \ ATOM 17 CG2 THR D 406 -47.861 68.439-239.561 1.00 -1.00 \ ATOM 18 N GLY D 407 -46.942 72.354-237.192 1.00 -1.00 \ ATOM 19 CA GLY D 407 -46.890 73.148-235.984 1.00 -1.00 \ ATOM 20 C GLY D 407 -46.754 72.355-234.705 1.00 -1.00 \ ATOM 21 O GLY D 407 -46.867 72.938-233.620 1.00 -1.00 \ ATOM 22 N GLU D 408 -46.521 71.047-234.795 1.00 -1.00 \ ATOM 23 CA GLU D 408 -46.355 70.225-233.604 1.00 -1.00 \ ATOM 24 C GLU D 408 -45.067 70.599-232.881 1.00 -1.00 \ ATOM 25 O GLU D 408 -43.997 70.676-233.494 1.00 -1.00 \ ATOM 26 CB GLU D 408 -46.339 68.745-233.980 1.00 -1.00 \ ATOM 27 CG GLU D 408 -46.114 67.809-232.803 1.00 -1.00 \ ATOM 28 CD GLU D 408 -45.972 66.360-233.226 1.00 -1.00 \ ATOM 29 OE1 GLU D 408 -45.901 66.099-234.445 1.00 -1.00 \ ATOM 30 OE2 GLU D 408 -45.932 65.481-232.339 1.00 -1.00 \ ATOM 31 N LYS D 409 -45.172 70.837-231.575 1.00 0.72 \ ATOM 32 CA LYS D 409 -44.030 71.241-230.756 1.00 0.72 \ ATOM 33 C LYS D 409 -44.092 70.486-229.436 1.00 0.72 \ ATOM 34 O LYS D 409 -44.687 70.957-228.458 1.00 0.72 \ ATOM 35 CB LYS D 409 -44.017 72.754-230.531 1.00 0.72 \ ATOM 36 CG LYS D 409 -43.915 73.565-231.816 1.00 0.72 \ ATOM 37 CD LYS D 409 -44.040 75.057-231.561 1.00 0.72 \ ATOM 38 CE LYS D 409 -43.993 75.834-232.868 1.00 0.72 \ ATOM 39 NZ LYS D 409 -44.090 77.303-232.654 1.00 0.72 \ ATOM 40 N PRO D 410 -43.480 69.299-229.371 1.00 -0.22 \ ATOM 41 CA PRO D 410 -43.625 68.451-228.179 1.00 -0.22 \ ATOM 42 C PRO D 410 -42.793 68.884-226.982 1.00 -0.22 \ ATOM 43 O PRO D 410 -42.996 68.341-225.888 1.00 -0.22 \ ATOM 44 CB PRO D 410 -43.170 67.066-228.677 1.00 -0.22 \ ATOM 45 CG PRO D 410 -43.079 67.178-230.181 1.00 -0.22 \ ATOM 46 CD PRO D 410 -42.762 68.609-230.453 1.00 -0.22 \ ATOM 47 N PHE D 411 -41.873 69.831-227.140 1.00 0.56 \ ATOM 48 CA PHE D 411 -40.954 70.220-226.077 1.00 0.56 \ ATOM 49 C PHE D 411 -41.363 71.580-225.528 1.00 0.56 \ ATOM 50 O PHE D 411 -41.349 72.578-226.256 1.00 0.56 \ ATOM 51 CB PHE D 411 -39.515 70.249-226.592 1.00 0.56 \ ATOM 52 CG PHE D 411 -39.054 68.936-227.155 1.00 0.56 \ ATOM 53 CD1 PHE D 411 -38.491 67.973-226.333 1.00 0.56 \ ATOM 54 CD2 PHE D 411 -39.194 68.658-228.505 1.00 0.56 \ ATOM 55 CE1 PHE D 411 -38.072 66.761-226.848 1.00 0.56 \ ATOM 56 CE2 PHE D 411 -38.776 67.448-229.025 1.00 0.56 \ ATOM 57 CZ PHE D 411 -38.214 66.499-228.196 1.00 0.56 \ ATOM 58 N SER D 412 -41.716 71.616-224.245 1.00 -0.93 \ ATOM 59 CA SER D 412 -42.223 72.814-223.593 1.00 -0.93 \ ATOM 60 C SER D 412 -41.185 73.373-222.629 1.00 -0.93 \ ATOM 61 O SER D 412 -40.499 72.618-221.932 1.00 -0.93 \ ATOM 62 CB SER D 412 -43.523 72.518-222.838 1.00 -0.93 \ ATOM 63 OG SER D 412 -44.517 72.011-223.711 1.00 -0.93 \ ATOM 64 N CYS D 413 -41.081 74.698-222.590 1.00 1.92 \ ATOM 65 CA CYS D 413 -40.171 75.348-221.657 1.00 1.92 \ ATOM 66 C CYS D 413 -40.672 75.182-220.229 1.00 1.92 \ ATOM 67 O CYS D 413 -41.875 75.248-219.962 1.00 1.92 \ ATOM 68 CB CYS D 413 -40.028 76.830-221.997 1.00 1.92 \ ATOM 69 SG CYS D 413 -39.023 77.764-220.822 1.00 1.92 \ ATOM 70 N ARG D 414 -39.738 74.968-219.306 1.00 -0.86 \ ATOM 71 CA ARG D 414 -40.065 74.736-217.907 1.00 -0.86 \ ATOM 72 C ARG D 414 -39.895 75.975-217.040 1.00 -0.86 \ ATOM 73 O ARG D 414 -40.060 75.887-215.819 1.00 -0.86 \ ATOM 74 CB ARG D 414 -39.214 73.589-217.354 1.00 -0.86 \ ATOM 75 CG ARG D 414 -39.655 72.220-217.848 1.00 -0.86 \ ATOM 76 CD ARG D 414 -38.721 71.117-217.382 1.00 -0.86 \ ATOM 77 NE ARG D 414 -37.540 70.998-218.232 1.00 -0.86 \ ATOM 78 CZ ARG D 414 -37.490 70.264-219.338 1.00 -0.86 \ ATOM 79 NH1 ARG D 414 -38.557 69.582-219.733 1.00 -0.86 \ ATOM 80 NH2 ARG D 414 -36.374 70.210-220.052 1.00 -0.86 \ ATOM 81 N TRP D 415 -39.573 77.124-217.638 1.00 -0.73 \ ATOM 82 CA TRP D 415 -39.506 78.363-216.881 1.00 -0.73 \ ATOM 83 C TRP D 415 -40.917 78.882-216.597 1.00 -0.73 \ ATOM 84 O TRP D 415 -41.822 78.721-217.415 1.00 -0.73 \ ATOM 85 CB TRP D 415 -38.706 79.415-217.646 1.00 -0.73 \ ATOM 86 N PRO D 416 -41.121 79.501-215.434 1.00 -0.86 \ ATOM 87 CA PRO D 416 -42.473 79.950-215.077 1.00 -0.86 \ ATOM 88 C PRO D 416 -42.955 81.077-215.973 1.00 -0.86 \ ATOM 89 O PRO D 416 -42.175 81.903-216.452 1.00 -0.86 \ ATOM 90 CB PRO D 416 -42.307 80.424-213.627 1.00 -0.86 \ ATOM 91 CG PRO D 416 -40.865 80.774-213.506 1.00 -0.86 \ ATOM 92 CD PRO D 416 -40.136 79.797-214.382 1.00 -0.86 \ ATOM 93 N SER D 417 -44.270 81.093-216.202 1.00 -0.67 \ ATOM 94 CA SER D 417 -44.958 82.130-216.970 1.00 -0.67 \ ATOM 95 C SER D 417 -44.516 82.170-218.428 1.00 -0.67 \ ATOM 96 O SER D 417 -44.758 83.161-219.126 1.00 -0.67 \ ATOM 97 CB SER D 417 -44.779 83.511-216.328 1.00 -0.67 \ ATOM 98 N CYS D 418 -43.867 81.112-218.907 1.00 1.92 \ ATOM 99 CA CYS D 418 -43.419 81.018-220.291 1.00 1.92 \ ATOM 100 C CYS D 418 -44.005 79.758-220.908 1.00 1.92 \ ATOM 101 O CYS D 418 -43.677 78.646-220.482 1.00 1.92 \ ATOM 102 CB CYS D 418 -41.893 81.000-220.386 1.00 1.92 \ ATOM 103 SG CYS D 418 -41.270 80.925-222.085 1.00 1.92 \ ATOM 104 N GLN D 419 -44.862 79.935-221.913 1.00 -0.81 \ ATOM 105 CA GLN D 419 -45.511 78.828-222.605 1.00 -0.81 \ ATOM 106 C GLN D 419 -44.860 78.525-223.951 1.00 -0.81 \ ATOM 107 O GLN D 419 -45.529 78.041-224.870 1.00 -0.81 \ ATOM 108 CB GLN D 419 -46.999 79.124-222.790 1.00 -0.81 \ ATOM 109 N LYS D 420 -43.563 78.796-224.083 1.00 0.01 \ ATOM 110 CA LYS D 420 -42.873 78.564-225.344 1.00 0.01 \ ATOM 111 C LYS D 420 -42.684 77.071-225.581 1.00 0.01 \ ATOM 112 O LYS D 420 -42.227 76.343-224.694 1.00 0.01 \ ATOM 113 CB LYS D 420 -41.522 79.277-225.348 1.00 0.01 \ ATOM 114 N LYS D 421 -43.037 76.618-226.780 1.00 -0.72 \ ATOM 115 CA LYS D 421 -42.872 75.231-227.182 1.00 -0.72 \ ATOM 116 C LYS D 421 -41.996 75.161-228.426 1.00 -0.72 \ ATOM 117 O LYS D 421 -41.865 76.135-229.173 1.00 -0.72 \ ATOM 118 CB LYS D 421 -44.225 74.557-227.445 1.00 -0.72 \ ATOM 119 CG LYS D 421 -45.112 74.442-226.218 1.00 -0.72 \ ATOM 120 CD LYS D 421 -46.271 73.493-226.465 1.00 -0.72 \ ATOM 121 CE LYS D 421 -47.096 73.305-225.206 1.00 -0.72 \ ATOM 122 NZ LYS D 421 -48.124 72.242-225.369 1.00 -0.72 \ ATOM 123 N PHE D 422 -41.386 73.995-228.641 1.00 1.24 \ ATOM 124 CA PHE D 422 -40.410 73.826-229.708 1.00 1.24 \ ATOM 125 C PHE D 422 -40.548 72.446-230.334 1.00 1.24 \ ATOM 126 O PHE D 422 -41.006 71.495-229.695 1.00 1.24 \ ATOM 127 CB PHE D 422 -38.980 74.034-229.191 1.00 1.24 \ ATOM 128 CG PHE D 422 -38.738 75.409-228.643 1.00 1.24 \ ATOM 129 CD1 PHE D 422 -38.318 76.434-229.473 1.00 1.24 \ ATOM 130 CD2 PHE D 422 -38.952 75.682-227.303 1.00 1.24 \ ATOM 131 CE1 PHE D 422 -38.105 77.704-228.975 1.00 1.24 \ ATOM 132 CE2 PHE D 422 -38.744 76.949-226.801 1.00 1.24 \ ATOM 133 CZ PHE D 422 -38.319 77.962-227.639 1.00 1.24 \ ATOM 134 N ALA D 423 -40.130 72.349-231.598 1.00 -0.67 \ ATOM 135 CA ALA D 423 -40.292 71.114-232.355 1.00 -0.67 \ ATOM 136 C ALA D 423 -39.229 70.077-232.019 1.00 -0.67 \ ATOM 137 O ALA D 423 -39.487 68.874-232.143 1.00 -0.67 \ ATOM 138 CB ALA D 423 -40.271 71.414-233.855 1.00 -0.67 \ ATOM 139 N ARG D 424 -38.040 70.507-231.603 1.00 -0.79 \ ATOM 140 CA ARG D 424 -36.935 69.593-231.359 1.00 -0.79 \ ATOM 141 C ARG D 424 -36.359 69.829-229.970 1.00 -0.79 \ ATOM 142 O ARG D 424 -36.484 70.915-229.396 1.00 -0.79 \ ATOM 143 CB ARG D 424 -35.838 69.747-232.425 1.00 -0.79 \ ATOM 144 CG ARG D 424 -36.374 69.944-233.835 1.00 -0.79 \ ATOM 145 CD ARG D 424 -35.300 69.762-234.895 1.00 -0.79 \ ATOM 146 NE ARG D 424 -34.023 70.362-234.513 1.00 -0.79 \ ATOM 147 CZ ARG D 424 -33.099 70.764-235.381 1.00 -0.79 \ ATOM 148 NH1 ARG D 424 -33.316 70.650-236.685 1.00 -0.79 \ ATOM 149 NH2 ARG D 424 -31.963 71.291-234.948 1.00 -0.79 \ ATOM 150 N SER D 425 -35.723 68.783-229.433 1.00 -0.72 \ ATOM 151 CA SER D 425 -35.176 68.861-228.082 1.00 -0.72 \ ATOM 152 C SER D 425 -34.020 69.850-228.003 1.00 -0.72 \ ATOM 153 O SER D 425 -33.899 70.592-227.021 1.00 -0.72 \ ATOM 154 CB SER D 425 -34.726 67.478-227.616 1.00 -0.72 \ ATOM 155 OG SER D 425 -33.678 66.978-228.431 1.00 -0.72 \ ATOM 156 N ASP D 426 -33.152 69.868-229.018 1.00 -0.74 \ ATOM 157 CA ASP D 426 -32.022 70.790-228.999 1.00 -0.74 \ ATOM 158 C ASP D 426 -32.460 72.243-229.128 1.00 -0.74 \ ATOM 159 O ASP D 426 -31.710 73.140-228.730 1.00 -0.74 \ ATOM 160 CB ASP D 426 -31.024 70.437-230.106 1.00 -0.74 \ ATOM 161 CG ASP D 426 -31.641 70.471-231.489 1.00 -0.74 \ ATOM 162 OD1 ASP D 426 -32.784 69.998-231.645 1.00 -0.74 \ ATOM 163 OD2 ASP D 426 -30.980 70.973-232.422 1.00 -0.74 \ ATOM 164 N GLU D 427 -33.653 72.496-229.669 1.00 -0.74 \ ATOM 165 CA GLU D 427 -34.179 73.857-229.674 1.00 -0.74 \ ATOM 166 C GLU D 427 -34.606 74.280-228.276 1.00 -0.74 \ ATOM 167 O GLU D 427 -34.417 75.439-227.884 1.00 -0.74 \ ATOM 168 CB GLU D 427 -35.347 73.966-230.653 1.00 -0.74 \ ATOM 169 CG GLU D 427 -34.947 73.833-232.117 1.00 -0.74 \ ATOM 170 CD GLU D 427 -36.145 73.703-233.040 1.00 -0.74 \ ATOM 171 OE1 GLU D 427 -37.239 73.363-232.545 1.00 -0.74 \ ATOM 172 OE2 GLU D 427 -35.994 73.942-234.257 1.00 -0.74 \ ATOM 173 N LEU D 428 -35.182 73.351-227.507 1.00 0.59 \ ATOM 174 CA LEU D 428 -35.541 73.654-226.126 1.00 0.59 \ ATOM 175 C LEU D 428 -34.304 73.867-225.262 1.00 0.59 \ ATOM 176 O LEU D 428 -34.330 74.685-224.335 1.00 0.59 \ ATOM 177 CB LEU D 428 -36.408 72.532-225.550 1.00 0.59 \ ATOM 178 CG LEU D 428 -36.791 72.642-224.072 1.00 0.59 \ ATOM 179 CD1 LEU D 428 -37.567 73.921-223.815 1.00 0.59 \ ATOM 180 CD2 LEU D 428 -37.590 71.426-223.620 1.00 0.59 \ ATOM 181 N VAL D 429 -33.217 73.147-225.549 1.00 -0.65 \ ATOM 182 CA VAL D 429 -31.991 73.298-224.768 1.00 -0.65 \ ATOM 183 C VAL D 429 -31.444 74.714-224.906 1.00 -0.65 \ ATOM 184 O VAL D 429 -31.080 75.358-223.915 1.00 -0.65 \ ATOM 185 CB VAL D 429 -30.952 72.246-225.194 1.00 -0.65 \ ATOM 186 CG1 VAL D 429 -29.611 72.537-224.541 1.00 -0.65 \ ATOM 187 CG2 VAL D 429 -31.439 70.849-224.835 1.00 -0.65 \ ATOM 188 N ARG D 430 -31.382 75.221-226.140 1.00 -0.68 \ ATOM 189 CA ARG D 430 -30.914 76.588-226.352 1.00 -0.68 \ ATOM 190 C ARG D 430 -31.870 77.601-225.736 1.00 -0.68 \ ATOM 191 O ARG D 430 -31.438 78.640-225.223 1.00 -0.68 \ ATOM 192 CB ARG D 430 -30.737 76.862-227.845 1.00 -0.68 \ ATOM 193 CG ARG D 430 -29.555 76.149-228.477 1.00 -0.68 \ ATOM 194 CD ARG D 430 -29.408 76.526-229.942 1.00 -0.68 \ ATOM 195 NE ARG D 430 -28.248 75.891-230.560 1.00 -0.68 \ ATOM 196 CZ ARG D 430 -27.948 75.982-231.851 1.00 -0.68 \ ATOM 197 NH1 ARG D 430 -28.727 76.681-232.666 1.00 -0.68 \ ATOM 198 NH2 ARG D 430 -26.873 75.372-232.329 1.00 -0.68 \ ATOM 199 N HIS D 431 -33.174 77.317-225.778 1.00 1.92 \ ATOM 200 CA HIS D 431 -34.146 78.214-225.162 1.00 1.92 \ ATOM 201 C HIS D 431 -33.988 78.242-223.648 1.00 1.92 \ ATOM 202 O HIS D 431 -34.134 79.297-223.021 1.00 1.92 \ ATOM 203 CB HIS D 431 -35.562 77.792-225.544 1.00 1.92 \ ATOM 204 CG HIS D 431 -36.633 78.645-224.938 1.00 1.92 \ ATOM 205 ND1 HIS D 431 -36.893 79.929-225.367 1.00 1.92 \ ATOM 206 CD2 HIS D 431 -37.517 78.394-223.944 1.00 1.92 \ ATOM 207 CE1 HIS D 431 -37.890 80.433-224.660 1.00 1.92 \ ATOM 208 NE2 HIS D 431 -38.287 79.521-223.791 1.00 1.92 \ ATOM 209 N HIS D 432 -33.699 77.088-223.041 1.00 -0.83 \ ATOM 210 CA HIS D 432 -33.447 77.055-221.605 1.00 -0.83 \ ATOM 211 C HIS D 432 -32.190 77.837-221.251 1.00 -0.83 \ ATOM 212 O HIS D 432 -32.160 78.559-220.247 1.00 -0.83 \ ATOM 213 CB HIS D 432 -33.337 75.608-221.123 1.00 -0.83 \ ATOM 214 CG HIS D 432 -34.659 74.957-220.860 1.00 -0.83 \ ATOM 215 ND1 HIS D 432 -34.808 73.591-220.755 1.00 -0.83 \ ATOM 216 CD2 HIS D 432 -35.892 75.485-220.669 1.00 -0.83 \ ATOM 217 CE1 HIS D 432 -36.075 73.305-220.516 1.00 -0.83 \ ATOM 218 NE2 HIS D 432 -36.754 74.437-220.459 1.00 -0.83 \ ATOM 219 N ASN D 433 -31.139 77.706-222.065 1.00 -0.32 \ ATOM 220 CA ASN D 433 -29.939 78.507-221.851 1.00 -0.32 \ ATOM 221 C ASN D 433 -30.210 79.986-222.084 1.00 -0.32 \ ATOM 222 O ASN D 433 -29.533 80.841-221.502 1.00 -0.32 \ ATOM 223 CB ASN D 433 -28.811 78.027-222.763 1.00 -0.32 \ ATOM 224 CG ASN D 433 -28.414 76.590-222.494 1.00 -0.32 \ ATOM 225 OD1 ASN D 433 -28.604 76.077-221.391 1.00 -0.32 \ ATOM 226 ND2 ASN D 433 -27.855 75.933-223.503 1.00 -0.32 \ ATOM 227 N MET D 434 -31.191 80.308-222.931 1.00 -0.43 \ ATOM 228 CA MET D 434 -31.540 81.705-223.161 1.00 -0.43 \ ATOM 229 C MET D 434 -32.051 82.356-221.882 1.00 -0.43 \ ATOM 230 O MET D 434 -31.790 83.540-221.631 1.00 -0.43 \ ATOM 231 CB MET D 434 -32.576 81.805-224.283 1.00 -0.43 \ ATOM 232 CG MET D 434 -32.918 83.222-224.705 1.00 -0.43 \ ATOM 233 SD MET D 434 -34.253 83.950-223.738 1.00 -0.43 \ ATOM 234 CE MET D 434 -34.007 85.684-224.101 1.00 -0.43 \ ATOM 235 N HIS D 435 -32.779 81.596-221.057 1.00 1.92 \ ATOM 236 CA HIS D 435 -33.203 82.081-219.749 1.00 1.92 \ ATOM 237 C HIS D 435 -32.065 82.118-218.740 1.00 1.92 \ ATOM 238 O HIS D 435 -32.238 82.703-217.664 1.00 1.92 \ ATOM 239 CB HIS D 435 -34.318 81.201-219.182 1.00 1.92 \ ATOM 240 CG HIS D 435 -35.555 81.158-220.023 1.00 1.92 \ ATOM 241 ND1 HIS D 435 -36.377 82.251-220.198 1.00 1.92 \ ATOM 242 CD2 HIS D 435 -36.125 80.145-220.717 1.00 1.92 \ ATOM 243 CE1 HIS D 435 -37.393 81.916-220.974 1.00 1.92 \ ATOM 244 NE2 HIS D 435 -37.263 80.643-221.301 1.00 1.92 \ ATOM 245 N GLN D 436 -30.920 81.519-219.061 1.00 0.44 \ ATOM 246 CA GLN D 436 -29.852 81.261-218.093 1.00 0.44 \ ATOM 247 C GLN D 436 -30.385 80.440-216.924 1.00 0.44 \ ATOM 248 O GLN D 436 -30.302 79.210-216.922 1.00 0.44 \ ATOM 249 CB GLN D 436 -29.224 82.562-217.579 1.00 0.44 \ ATOM 250 CG GLN D 436 -28.163 83.156-218.486 1.00 0.44 \ ATOM 251 CD GLN D 436 -28.737 84.103-219.517 1.00 0.44 \ ATOM 252 OE1 GLN D 436 -29.943 84.348-219.549 1.00 0.44 \ ATOM 253 NE2 GLN D 436 -27.873 84.646-220.365 1.00 0.44 \ """, "e6b0oD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6b0oD1_csv", state=0, origin=1) cmd.zoom("e6b0oD1_csv", animate=-1)