cmd.read_pdbstr("""\ ATOM 1 N ARG D 321 6.669 52.832-213.344 1.00 -1.00 \ ATOM 2 CA ARG D 321 5.487 52.911-214.195 1.00 -1.00 \ ATOM 3 C ARG D 321 4.301 53.477-213.419 1.00 -1.00 \ ATOM 4 O ARG D 321 3.492 52.728-212.874 1.00 -1.00 \ ATOM 5 CB ARG D 321 5.146 51.534-214.766 1.00 -1.00 \ ATOM 6 CG ARG D 321 6.219 50.970-215.686 1.00 -1.00 \ ATOM 7 CD ARG D 321 5.859 49.578-216.180 1.00 -1.00 \ ATOM 8 NE ARG D 321 6.826 49.077-217.154 1.00 -1.00 \ ATOM 9 CZ ARG D 321 6.697 49.205-218.471 1.00 -1.00 \ ATOM 10 NH1 ARG D 321 5.637 49.820-218.979 1.00 -1.00 \ ATOM 11 NH2 ARG D 321 7.627 48.719-219.281 1.00 -1.00 \ ATOM 12 N PRO D 322 4.199 54.808-213.377 1.00 1.52 \ ATOM 13 CA PRO D 322 3.179 55.439-212.525 1.00 1.52 \ ATOM 14 C PRO D 322 1.768 55.360-213.080 1.00 1.52 \ ATOM 15 O PRO D 322 0.815 55.566-212.318 1.00 1.52 \ ATOM 16 CB PRO D 322 3.650 56.901-212.432 1.00 1.52 \ ATOM 17 CG PRO D 322 5.052 56.917-213.000 1.00 1.52 \ ATOM 18 CD PRO D 322 5.096 55.801-213.987 1.00 1.52 \ ATOM 19 N PHE D 323 1.594 55.069-214.366 1.00 -0.01 \ ATOM 20 CA PHE D 323 0.296 55.169-215.031 1.00 -0.01 \ ATOM 21 C PHE D 323 -0.278 53.771-215.244 1.00 -0.01 \ ATOM 22 O PHE D 323 0.100 53.073-216.189 1.00 -0.01 \ ATOM 23 CB PHE D 323 0.432 55.920-216.353 1.00 -0.01 \ ATOM 24 CG PHE D 323 1.053 57.280-216.214 1.00 -0.01 \ ATOM 25 CD1 PHE D 323 0.269 58.389-215.948 1.00 -0.01 \ ATOM 26 CD2 PHE D 323 2.422 57.448-216.345 1.00 -0.01 \ ATOM 27 CE1 PHE D 323 0.838 59.642-215.817 1.00 -0.01 \ ATOM 28 CE2 PHE D 323 2.997 58.698-216.214 1.00 -0.01 \ ATOM 29 CZ PHE D 323 2.203 59.795-215.950 1.00 -0.01 \ ATOM 30 N MET D 324 -1.202 53.373-214.371 1.00 -1.08 \ ATOM 31 CA MET D 324 -1.902 52.104-214.510 1.00 -1.08 \ ATOM 32 C MET D 324 -3.211 52.306-215.264 1.00 -1.08 \ ATOM 33 O MET D 324 -3.909 53.304-215.063 1.00 -1.08 \ ATOM 34 CB MET D 324 -2.176 51.474-213.142 1.00 -1.08 \ ATOM 35 CG MET D 324 -3.119 50.273-213.189 1.00 -1.08 \ ATOM 36 SD MET D 324 -3.322 49.411-211.618 1.00 -1.08 \ ATOM 37 CE MET D 324 -1.902 48.322-211.645 1.00 -1.08 \ ATOM 38 N CYS D 325 -3.533 51.356-216.139 1.00 1.52 \ ATOM 39 CA CYS D 325 -4.781 51.418-216.888 1.00 1.52 \ ATOM 40 C CYS D 325 -5.976 51.370-215.944 1.00 1.52 \ ATOM 41 O CYS D 325 -5.991 50.613-214.970 1.00 1.52 \ ATOM 42 CB CYS D 325 -4.856 50.265-217.891 1.00 1.52 \ ATOM 43 SG CYS D 325 -6.356 50.258-218.896 1.00 1.52 \ ATOM 44 N ALA D 326 -6.984 52.187-216.241 1.00 -1.08 \ ATOM 45 CA ALA D 326 -8.174 52.293-215.409 1.00 -1.08 \ ATOM 46 C ALA D 326 -9.270 51.311-215.800 1.00 -1.08 \ ATOM 47 O ALA D 326 -10.307 51.265-215.128 1.00 -1.08 \ ATOM 48 CB ALA D 326 -8.727 53.720-215.459 1.00 -1.08 \ ATOM 49 N TYR D 327 -9.075 50.534-216.861 1.00 -1.08 \ ATOM 50 CA TYR D 327 -10.086 49.568-217.260 1.00 -1.08 \ ATOM 51 C TYR D 327 -10.165 48.446-216.226 1.00 -1.08 \ ATOM 52 O TYR D 327 -9.131 47.967-215.752 1.00 -1.08 \ ATOM 53 CB TYR D 327 -9.768 48.997-218.642 1.00 -1.08 \ ATOM 54 CG TYR D 327 -10.953 48.354-219.327 1.00 -1.08 \ ATOM 55 CD1 TYR D 327 -11.937 49.129-219.927 1.00 -1.08 \ ATOM 56 CD2 TYR D 327 -11.086 46.972-219.378 1.00 -1.08 \ ATOM 57 CE1 TYR D 327 -13.022 48.548-220.555 1.00 -1.08 \ ATOM 58 CE2 TYR D 327 -12.168 46.382-220.005 1.00 -1.08 \ ATOM 59 CZ TYR D 327 -13.132 47.174-220.592 1.00 -1.08 \ ATOM 60 OH TYR D 327 -14.211 46.590-221.216 1.00 -1.08 \ ATOM 61 N PRO D 328 -11.371 48.018-215.851 1.00 0.01 \ ATOM 62 CA PRO D 328 -11.507 47.021-214.775 1.00 0.01 \ ATOM 63 C PRO D 328 -10.827 45.707-215.127 1.00 0.01 \ ATOM 64 O PRO D 328 -11.141 45.072-216.136 1.00 0.01 \ ATOM 65 CB PRO D 328 -13.026 46.856-214.642 1.00 0.01 \ ATOM 66 CG PRO D 328 -13.601 48.115-215.211 1.00 0.01 \ ATOM 67 CD PRO D 328 -12.677 48.505-216.324 1.00 0.01 \ ATOM 68 N GLY D 329 -9.884 45.302-214.279 1.00 -1.00 \ ATOM 69 CA GLY D 329 -9.241 44.012-214.420 1.00 -1.00 \ ATOM 70 C GLY D 329 -8.078 43.965-215.382 1.00 -1.00 \ ATOM 71 O GLY D 329 -7.696 42.873-215.817 1.00 -1.00 \ ATOM 72 N CYS D 330 -7.493 45.112-215.729 1.00 -1.00 \ ATOM 73 CA CYS D 330 -6.384 45.152-216.677 1.00 -1.00 \ ATOM 74 C CYS D 330 -5.036 45.226-215.965 1.00 -1.00 \ ATOM 75 O CYS D 330 -4.163 44.382-216.189 1.00 -1.00 \ ATOM 76 CB CYS D 330 -6.548 46.338-217.634 1.00 -1.00 \ ATOM 77 SG CYS D 330 -5.242 46.452-218.872 1.00 -1.00 \ ATOM 78 N ASN D 331 -4.852 46.243-215.120 1.00 0.01 \ ATOM 79 CA ASN D 331 -3.670 46.422-214.279 1.00 0.01 \ ATOM 80 C ASN D 331 -2.392 46.676-215.070 1.00 0.01 \ ATOM 81 O ASN D 331 -1.294 46.528-214.524 1.00 0.01 \ ATOM 82 CB ASN D 331 -3.458 45.224-213.346 1.00 0.01 \ ATOM 83 CG ASN D 331 -4.483 45.161-212.233 1.00 0.01 \ ATOM 84 OD1 ASN D 331 -5.608 45.644-212.371 1.00 0.01 \ ATOM 85 ND2 ASN D 331 -4.094 44.563-211.115 1.00 0.01 \ ATOM 86 N LYS D 332 -2.502 47.050-216.343 1.00 1.25 \ ATOM 87 CA LYS D 332 -1.323 47.402-217.122 1.00 1.25 \ ATOM 88 C LYS D 332 -0.773 48.754-216.680 1.00 1.25 \ ATOM 89 O LYS D 332 -1.527 49.705-216.461 1.00 1.25 \ ATOM 90 CB LYS D 332 -1.661 47.441-218.610 1.00 1.25 \ ATOM 91 CG LYS D 332 -1.766 46.080-219.273 1.00 1.25 \ ATOM 92 CD LYS D 332 -0.407 45.416-219.377 1.00 1.25 \ ATOM 93 CE LYS D 332 -0.335 44.553-220.619 1.00 1.25 \ ATOM 94 NZ LYS D 332 -0.716 45.350-221.816 1.00 1.25 \ ATOM 95 N ARG D 333 0.552 48.840-216.567 1.00 0.01 \ ATOM 96 CA ARG D 333 1.227 50.047-216.114 1.00 0.01 \ ATOM 97 C ARG D 333 2.222 50.521-217.166 1.00 0.01 \ ATOM 98 O ARG D 333 2.771 49.720-217.927 1.00 0.01 \ ATOM 99 CB ARG D 333 1.946 49.814-214.780 1.00 0.01 \ ATOM 100 CG ARG D 333 1.015 49.688-213.590 1.00 0.01 \ ATOM 101 CD ARG D 333 1.800 49.622-212.292 1.00 0.01 \ ATOM 102 NE ARG D 333 0.944 49.838-211.131 1.00 0.01 \ ATOM 103 CZ ARG D 333 0.675 51.033-210.617 1.00 0.01 \ ATOM 104 NH1 ARG D 333 1.201 52.123-211.159 1.00 0.01 \ ATOM 105 NH2 ARG D 333 -0.119 51.140-209.561 1.00 0.01 \ ATOM 106 N TYR D 334 2.452 51.833-217.199 1.00 -0.01 \ ATOM 107 CA TYR D 334 3.300 52.444-218.213 1.00 -0.01 \ ATOM 108 C TYR D 334 4.072 53.606-217.608 1.00 -0.01 \ ATOM 109 O TYR D 334 3.678 54.180-216.590 1.00 -0.01 \ ATOM 110 CB TYR D 334 2.480 52.925-219.418 1.00 -0.01 \ ATOM 111 CG TYR D 334 1.770 51.804-220.138 1.00 -0.01 \ ATOM 112 CD1 TYR D 334 2.408 51.086-221.138 1.00 -0.01 \ ATOM 113 CD2 TYR D 334 0.466 51.456-219.809 1.00 -0.01 \ ATOM 114 CE1 TYR D 334 1.768 50.056-221.795 1.00 -0.01 \ ATOM 115 CE2 TYR D 334 -0.183 50.426-220.460 1.00 -0.01 \ ATOM 116 CZ TYR D 334 0.473 49.730-221.453 1.00 -0.01 \ ATOM 117 OH TYR D 334 -0.166 48.703-222.106 1.00 -0.01 \ ATOM 118 N PHE D 335 5.187 53.949-218.259 1.00 -0.01 \ ATOM 119 CA PHE D 335 6.031 55.043-217.793 1.00 -0.01 \ ATOM 120 C PHE D 335 5.469 56.410-218.161 1.00 -0.01 \ ATOM 121 O PHE D 335 5.703 57.385-217.439 1.00 -0.01 \ ATOM 122 CB PHE D 335 7.444 54.908-218.367 1.00 -0.01 \ ATOM 123 CG PHE D 335 8.195 53.703-217.872 1.00 -0.01 \ ATOM 124 CD1 PHE D 335 8.711 53.671-216.587 1.00 -0.01 \ ATOM 125 CD2 PHE D 335 8.403 52.612-218.700 1.00 -0.01 \ ATOM 126 CE1 PHE D 335 9.409 52.567-216.132 1.00 -0.01 \ ATOM 127 CE2 PHE D 335 9.101 51.506-218.250 1.00 -0.01 \ ATOM 128 CZ PHE D 335 9.604 51.483-216.965 1.00 -0.01 \ ATOM 129 N LYS D 336 4.745 56.509-219.273 1.00 0.01 \ ATOM 130 CA LYS D 336 4.258 57.785-219.772 1.00 0.01 \ ATOM 131 C LYS D 336 2.755 57.718-219.992 1.00 0.01 \ ATOM 132 O LYS D 336 2.206 56.662-220.321 1.00 0.01 \ ATOM 133 CB LYS D 336 4.959 58.179-221.083 1.00 0.01 \ ATOM 134 CG LYS D 336 6.468 58.314-220.964 1.00 0.01 \ ATOM 135 CD LYS D 336 6.847 59.441-220.020 1.00 0.01 \ ATOM 136 CE LYS D 336 8.351 59.499-219.812 1.00 0.01 \ ATOM 137 NZ LYS D 336 9.086 59.579-221.104 1.00 0.01 \ ATOM 138 N LEU D 337 2.094 58.864-219.806 1.00 -1.08 \ ATOM 139 CA LEU D 337 0.651 58.928-220.009 1.00 -1.08 \ ATOM 140 C LEU D 337 0.286 58.671-221.467 1.00 -1.08 \ ATOM 141 O LEU D 337 -0.756 58.072-221.758 1.00 -1.08 \ ATOM 142 CB LEU D 337 0.119 60.287-219.552 1.00 -1.08 \ ATOM 143 CG LEU D 337 -1.397 60.484-219.585 1.00 -1.08 \ ATOM 144 CD1 LEU D 337 -2.081 59.415-218.750 1.00 -1.08 \ ATOM 145 CD2 LEU D 337 -1.771 61.875-219.088 1.00 -1.08 \ ATOM 146 N SER D 338 1.137 59.113-222.396 1.00 -1.08 \ ATOM 147 CA SER D 338 0.866 58.892-223.813 1.00 -1.08 \ ATOM 148 C SER D 338 0.888 57.408-224.156 1.00 -1.08 \ ATOM 149 O SER D 338 0.109 56.945-224.997 1.00 -1.08 \ ATOM 150 CB SER D 338 1.879 59.654-224.666 1.00 -1.08 \ ATOM 151 OG SER D 338 3.195 59.182-224.432 1.00 -1.08 \ ATOM 152 N HIS D 339 1.779 56.646-223.516 1.00 0.07 \ ATOM 153 CA HIS D 339 1.814 55.203-223.736 1.00 0.07 \ ATOM 154 C HIS D 339 0.518 54.554-223.267 1.00 0.07 \ ATOM 155 O HIS D 339 -0.050 53.699-223.957 1.00 0.07 \ ATOM 156 CB HIS D 339 3.016 54.590-223.013 1.00 0.07 \ ATOM 157 CG HIS D 339 4.328 55.211-223.379 1.00 0.07 \ ATOM 158 ND1 HIS D 339 5.475 55.018-222.639 1.00 0.07 \ ATOM 159 CD2 HIS D 339 4.677 56.021-224.407 1.00 0.07 \ ATOM 160 CE1 HIS D 339 6.472 55.684-223.193 1.00 0.07 \ ATOM 161 NE2 HIS D 339 6.015 56.301-224.267 1.00 0.07 \ ATOM 162 N LEU D 340 0.032 54.958-222.091 1.00 1.52 \ ATOM 163 CA LEU D 340 -1.224 54.419-221.579 1.00 1.52 \ ATOM 164 C LEU D 340 -2.399 54.838-222.453 1.00 1.52 \ ATOM 165 O LEU D 340 -3.330 54.053-222.673 1.00 1.52 \ ATOM 166 CB LEU D 340 -1.436 54.877-220.137 1.00 1.52 \ ATOM 167 CG LEU D 340 -2.777 54.499-219.510 1.00 1.52 \ ATOM 168 CD1 LEU D 340 -2.952 52.990-219.523 1.00 1.52 \ ATOM 169 CD2 LEU D 340 -2.884 55.049-218.098 1.00 1.52 \ ATOM 170 N GLN D 341 -2.371 56.073-222.960 1.00 -1.08 \ ATOM 171 CA GLN D 341 -3.451 56.554-223.815 1.00 -1.08 \ ATOM 172 C GLN D 341 -3.609 55.677-225.051 1.00 -1.08 \ ATOM 173 O GLN D 341 -4.733 55.358-225.457 1.00 -1.08 \ ATOM 174 CB GLN D 341 -3.190 58.005-224.216 1.00 -1.08 \ ATOM 175 CG GLN D 341 -4.286 58.617-225.070 1.00 -1.08 \ ATOM 176 CD GLN D 341 -5.612 58.702-224.341 1.00 -1.08 \ ATOM 177 OE1 GLN D 341 -5.723 59.358-223.305 1.00 -1.08 \ ATOM 178 NE2 GLN D 341 -6.626 58.034-224.879 1.00 -1.08 \ ATOM 179 N MET D 342 -2.493 55.271-225.661 1.00 -1.08 \ ATOM 180 CA MET D 342 -2.567 54.389-226.821 1.00 -1.08 \ ATOM 181 C MET D 342 -3.038 52.994-226.425 1.00 -1.08 \ ATOM 182 O MET D 342 -3.837 52.379-227.140 1.00 -1.08 \ ATOM 183 CB MET D 342 -1.207 54.326-227.519 1.00 -1.08 \ ATOM 184 CG MET D 342 -0.803 55.628-228.196 1.00 -1.08 \ ATOM 185 SD MET D 342 0.754 55.510-229.099 1.00 -1.08 \ ATOM 186 CE MET D 342 1.919 55.301-227.755 1.00 -1.08 \ ATOM 187 N HIS D 343 -2.561 52.483-225.288 1.00 1.52 \ ATOM 188 CA HIS D 343 -2.983 51.160-224.836 1.00 1.52 \ ATOM 189 C HIS D 343 -4.480 51.111-224.563 1.00 1.52 \ ATOM 190 O HIS D 343 -5.149 50.129-224.905 1.00 1.52 \ ATOM 191 CB HIS D 343 -2.212 50.760-223.579 1.00 1.52 \ ATOM 192 CG HIS D 343 -2.920 49.744-222.738 1.00 1.52 \ ATOM 193 ND1 HIS D 343 -2.875 48.393-223.007 1.00 1.52 \ ATOM 194 CD2 HIS D 343 -3.700 49.883-221.639 1.00 1.52 \ ATOM 195 CE1 HIS D 343 -3.591 47.743-222.106 1.00 1.52 \ ATOM 196 NE2 HIS D 343 -4.103 48.624-221.266 1.00 1.52 \ ATOM 197 N SER D 344 -5.024 52.164-223.945 1.00 -1.08 \ ATOM 198 CA SER D 344 -6.409 52.132-223.489 1.00 -1.08 \ ATOM 199 C SER D 344 -7.401 52.002-224.638 1.00 -1.08 \ ATOM 200 O SER D 344 -8.527 51.540-224.420 1.00 -1.08 \ ATOM 201 CB SER D 344 -6.720 53.388-222.671 1.00 -1.08 \ ATOM 202 OG SER D 344 -6.608 54.556-223.466 1.00 -1.08 \ ATOM 203 N ARG D 345 -7.014 52.393-225.855 1.00 -0.12 \ ATOM 204 CA ARG D 345 -7.934 52.313-226.984 1.00 -0.12 \ ATOM 205 C ARG D 345 -8.269 50.876-227.362 1.00 -0.12 \ ATOM 206 O ARG D 345 -9.268 50.648-228.053 1.00 -0.12 \ ATOM 207 CB ARG D 345 -7.352 53.054-228.189 1.00 -0.12 \ ATOM 208 CG ARG D 345 -7.125 54.536-227.940 1.00 -0.12 \ ATOM 209 CD ARG D 345 -6.897 55.290-229.239 1.00 -0.12 \ ATOM 210 NE ARG D 345 -6.678 56.715-229.012 1.00 -0.12 \ ATOM 211 CZ ARG D 345 -5.480 57.290-228.964 1.00 -0.12 \ ATOM 212 NH1 ARG D 345 -4.384 56.563-229.134 1.00 -0.12 \ ATOM 213 NH2 ARG D 345 -5.379 58.595-228.750 1.00 -0.12 \ ATOM 214 N LYS D 346 -7.466 49.904-226.922 1.00 1.37 \ ATOM 215 CA LYS D 346 -7.772 48.507-227.201 1.00 1.37 \ ATOM 216 C LYS D 346 -9.024 48.039-226.471 1.00 1.37 \ ATOM 217 O LYS D 346 -9.616 47.028-226.865 1.00 1.37 \ ATOM 218 CB LYS D 346 -6.585 47.620-226.815 1.00 1.37 \ ATOM 219 CG LYS D 346 -6.563 47.216-225.347 1.00 1.37 \ ATOM 220 CD LYS D 346 -5.205 46.674-224.928 1.00 1.37 \ ATOM 221 CE LYS D 346 -4.808 45.447-225.731 1.00 1.37 \ ATOM 222 NZ LYS D 346 -3.482 44.923-225.300 1.00 1.37 \ """, "e6b0oD3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6b0oD3_csv", state=0, origin=1) cmd.zoom("e6b0oD3_csv", animate=-1)