cmd.read_pdbstr("""\ ATOM 1 N VAL D 2 43.451 68.380 19.417 1.00 -1.00 \ ATOM 2 CA VAL D 2 43.721 68.351 17.985 1.00 -1.00 \ ATOM 3 C VAL D 2 44.075 66.940 17.528 1.00 -1.00 \ ATOM 4 O VAL D 2 45.062 66.358 17.979 1.00 -1.00 \ ATOM 5 CB VAL D 2 44.844 69.335 17.610 1.00 -1.00 \ ATOM 6 CG1 VAL D 2 45.315 69.082 16.187 1.00 -1.00 \ ATOM 7 CG2 VAL D 2 44.364 70.770 17.766 1.00 -1.00 \ ATOM 8 N ASN D 3 43.257 66.396 16.629 1.00 -0.47 \ ATOM 9 CA ASN D 3 43.504 65.083 16.043 1.00 -0.47 \ ATOM 10 C ASN D 3 44.624 65.212 15.016 1.00 -0.47 \ ATOM 11 O ASN D 3 44.458 65.875 13.986 1.00 -0.47 \ ATOM 12 CB ASN D 3 42.226 64.539 15.410 1.00 -0.47 \ ATOM 13 CG ASN D 3 42.401 63.143 14.849 1.00 -0.47 \ ATOM 14 OD1 ASN D 3 43.004 62.958 13.792 1.00 -0.47 \ ATOM 15 ND2 ASN D 3 41.862 62.151 15.549 1.00 -0.47 \ ATOM 16 N GLN D 4 45.766 64.578 15.293 1.00 0.23 \ ATOM 17 CA GLN D 4 46.945 64.767 14.451 1.00 0.23 \ ATOM 18 C GLN D 4 46.715 64.287 13.030 1.00 0.23 \ ATOM 19 O GLN D 4 47.363 64.773 12.097 1.00 0.23 \ ATOM 20 CB GLN D 4 48.146 64.035 15.042 1.00 0.23 \ ATOM 21 CG GLN D 4 48.856 64.781 16.147 1.00 0.23 \ ATOM 22 CD GLN D 4 50.201 64.168 16.472 1.00 0.23 \ ATOM 23 OE1 GLN D 4 50.653 63.244 15.796 1.00 0.23 \ ATOM 24 NE2 GLN D 4 50.850 64.678 17.511 1.00 0.23 \ ATOM 25 N HIS D 5 45.819 63.329 12.840 1.00 -0.04 \ ATOM 26 CA HIS D 5 45.662 62.759 11.515 1.00 -0.04 \ ATOM 27 C HIS D 5 44.977 63.739 10.560 1.00 -0.04 \ ATOM 28 O HIS D 5 45.464 63.988 9.447 1.00 -0.04 \ ATOM 29 CB HIS D 5 44.901 61.452 11.618 1.00 -0.04 \ ATOM 30 CG HIS D 5 44.800 60.764 10.312 1.00 -0.04 \ ATOM 31 ND1 HIS D 5 45.872 60.157 9.693 1.00 -0.04 \ ATOM 32 CD2 HIS D 5 43.790 60.737 9.428 1.00 -0.04 \ ATOM 33 CE1 HIS D 5 45.483 59.683 8.523 1.00 -0.04 \ ATOM 34 NE2 HIS D 5 44.219 60.015 8.342 1.00 -0.04 \ ATOM 35 N LEU D 6 43.849 64.314 10.985 1.00 1.15 \ ATOM 36 CA LEU D 6 43.175 65.332 10.181 1.00 1.15 \ ATOM 37 C LEU D 6 44.104 66.510 9.899 1.00 1.15 \ ATOM 38 O LEU D 6 44.249 66.956 8.746 1.00 1.15 \ ATOM 39 CB LEU D 6 41.909 65.799 10.905 1.00 1.15 \ ATOM 40 CG LEU D 6 40.980 64.712 11.458 1.00 1.15 \ ATOM 41 CD1 LEU D 6 39.917 65.309 12.376 1.00 1.15 \ ATOM 42 CD2 LEU D 6 40.332 63.930 10.328 1.00 1.15 \ ATOM 43 N CYS D 7 44.744 67.032 10.950 1.00 1.71 \ ATOM 44 CA CYS D 7 45.736 68.084 10.763 1.00 1.71 \ ATOM 45 C CYS D 7 46.754 67.677 9.710 1.00 1.71 \ ATOM 46 O CYS D 7 47.121 68.476 8.847 1.00 1.71 \ ATOM 47 CB CYS D 7 46.437 68.409 12.085 1.00 1.71 \ ATOM 48 SG CYS D 7 47.721 69.691 11.926 1.00 1.71 \ ATOM 49 N GLY D 8 47.217 66.427 9.768 1.00 0.71 \ ATOM 50 CA GLY D 8 48.150 65.947 8.759 1.00 0.71 \ ATOM 51 C GLY D 8 47.601 66.088 7.364 1.00 0.71 \ ATOM 52 O GLY D 8 48.290 66.563 6.449 1.00 0.71 \ ATOM 53 N SER D 9 46.347 65.672 7.149 1.00 -0.47 \ ATOM 54 CA SER D 9 45.706 65.863 5.859 0.59 -0.47 \ ATOM 55 C SER D 9 45.851 67.311 5.390 1.00 -0.47 \ ATOM 56 O SER D 9 46.373 67.580 4.288 1.00 -0.47 \ ATOM 57 CB SER D 9 44.232 65.463 5.948 0.59 -0.47 \ ATOM 58 OG SER D 9 43.531 65.788 4.759 0.59 -0.47 \ ATOM 59 N HIS D 10 45.411 68.259 6.223 1.00 -0.23 \ ATOM 60 CA HIS D 10 45.551 69.664 5.842 1.00 -0.23 \ ATOM 61 C HIS D 10 47.007 70.037 5.576 1.00 -0.23 \ ATOM 62 O HIS D 10 47.288 70.849 4.685 1.00 -0.23 \ ATOM 63 CB HIS D 10 44.963 70.567 6.924 1.00 -0.23 \ ATOM 64 CG HIS D 10 43.479 70.444 7.071 1.00 -0.23 \ ATOM 65 ND1 HIS D 10 42.593 71.248 6.387 1.00 -0.23 \ ATOM 66 CD2 HIS D 10 42.725 69.605 7.820 1.00 -0.23 \ ATOM 67 CE1 HIS D 10 41.357 70.912 6.710 1.00 -0.23 \ ATOM 68 NE2 HIS D 10 41.409 69.918 7.577 1.00 -0.23 \ ATOM 69 N LEU D 11 47.940 69.444 6.323 1.00 1.71 \ ATOM 70 CA LEU D 11 49.348 69.805 6.199 1.00 1.71 \ ATOM 71 C LEU D 11 49.917 69.365 4.859 1.00 1.71 \ ATOM 72 O LEU D 11 50.667 70.113 4.227 1.00 1.71 \ ATOM 73 CB LEU D 11 50.159 69.189 7.344 1.00 1.71 \ ATOM 74 CG LEU D 11 50.081 69.811 8.739 1.00 1.71 \ ATOM 75 CD1 LEU D 11 50.910 69.075 9.734 1.00 1.71 \ ATOM 76 CD2 LEU D 11 50.697 71.117 8.624 1.00 1.71 \ ATOM 77 N VAL D 12 49.589 68.151 4.413 1.00 0.71 \ ATOM 78 CA VAL D 12 50.129 67.700 3.136 1.00 0.71 \ ATOM 79 C VAL D 12 49.482 68.453 1.982 1.00 0.71 \ ATOM 80 O VAL D 12 50.130 68.690 0.955 1.00 0.71 \ ATOM 81 CB VAL D 12 49.983 66.176 2.972 1.00 0.71 \ ATOM 82 CG1 VAL D 12 50.764 65.450 4.058 1.00 0.71 \ ATOM 83 CG2 VAL D 12 48.522 65.769 2.982 1.00 0.71 \ ATOM 84 N GLU D 13 48.214 68.855 2.114 1.00 0.66 \ ATOM 85 CA GLU D 13 47.666 69.748 1.091 1.00 0.66 \ ATOM 86 C GLU D 13 48.453 71.061 1.039 1.00 0.66 \ ATOM 87 O GLU D 13 48.961 71.474 -0.022 1.00 0.66 \ ATOM 88 CB GLU D 13 46.180 70.001 1.361 1.00 0.66 \ ATOM 89 CG GLU D 13 45.448 70.750 0.256 1.00 0.66 \ ATOM 90 CD GLU D 13 45.499 72.254 0.433 1.00 0.66 \ ATOM 91 OE1 GLU D 13 45.177 72.979 -0.532 1.00 0.66 \ ATOM 92 OE2 GLU D 13 45.858 72.711 1.539 1.00 0.66 \ ATOM 93 N ALA D 14 48.587 71.716 2.197 1.00 -0.01 \ ATOM 94 CA ALA D 14 49.309 72.982 2.261 1.00 -0.01 \ ATOM 95 C ALA D 14 50.719 72.847 1.703 1.00 -0.01 \ ATOM 96 O ALA D 14 51.196 73.733 0.988 1.00 -0.01 \ ATOM 97 CB ALA D 14 49.349 73.488 3.703 1.00 -0.01 \ ATOM 98 N LEU D 15 51.404 71.747 2.023 1.00 1.71 \ ATOM 99 CA LEU D 15 52.764 71.542 1.537 1.00 1.71 \ ATOM 100 C LEU D 15 52.783 71.297 0.038 1.00 1.71 \ ATOM 101 O LEU D 15 53.728 71.699 -0.649 1.00 1.71 \ ATOM 102 CB LEU D 15 53.417 70.376 2.274 1.00 1.71 \ ATOM 103 CG LEU D 15 53.807 70.676 3.718 1.00 1.71 \ ATOM 104 CD1 LEU D 15 54.248 69.408 4.424 1.00 1.71 \ ATOM 105 CD2 LEU D 15 54.909 71.721 3.747 1.00 1.71 \ ATOM 106 N TYR D 16 51.767 70.613 -0.486 1.00 -0.22 \ ATOM 107 CA TYR D 16 51.615 70.555 -1.932 1.00 -0.22 \ ATOM 108 C TYR D 16 51.725 71.953 -2.523 1.00 -0.22 \ ATOM 109 O TYR D 16 52.594 72.224 -3.367 1.00 -0.22 \ ATOM 110 CB TYR D 16 50.278 69.909 -2.297 1.00 -0.22 \ ATOM 111 CG TYR D 16 49.932 70.018 -3.763 1.00 -0.22 \ ATOM 112 CD1 TYR D 16 50.438 69.112 -4.685 1.00 -0.22 \ ATOM 113 CD2 TYR D 16 49.099 71.028 -4.226 1.00 -0.22 \ ATOM 114 CE1 TYR D 16 50.124 69.209 -6.028 1.00 -0.22 \ ATOM 115 CE2 TYR D 16 48.780 71.133 -5.566 1.00 -0.22 \ ATOM 116 CZ TYR D 16 49.295 70.222 -6.463 1.00 -0.22 \ ATOM 117 OH TYR D 16 48.978 70.324 -7.798 1.00 -0.22 \ ATOM 118 N LEU D 17 50.884 72.876 -2.043 1.00 -0.23 \ ATOM 119 CA LEU D 17 50.904 74.230 -2.599 1.00 -0.23 \ ATOM 120 C LEU D 17 52.243 74.927 -2.356 1.00 -0.23 \ ATOM 121 O LEU D 17 52.847 75.476 -3.285 1.00 -0.23 \ ATOM 122 CB LEU D 17 49.762 75.057 -2.012 1.00 -0.23 \ ATOM 123 CG LEU D 17 48.330 74.631 -2.336 1.00 -0.23 \ ATOM 124 CD1 LEU D 17 47.357 75.454 -1.512 1.00 -0.23 \ ATOM 125 CD2 LEU D 17 48.036 74.779 -3.822 1.00 -0.23 \ ATOM 126 N VAL D 18 52.717 74.926 -1.107 1.00 0.26 \ ATOM 127 CA VAL D 18 53.882 75.728 -0.735 1.00 0.26 \ ATOM 128 C VAL D 18 55.135 75.233 -1.442 1.00 0.26 \ ATOM 129 O VAL D 18 55.929 76.029 -1.959 1.00 0.26 \ ATOM 130 CB VAL D 18 54.066 75.717 0.794 1.00 0.26 \ ATOM 131 CG1 VAL D 18 55.419 76.304 1.169 1.00 0.26 \ ATOM 132 CG2 VAL D 18 52.939 76.475 1.474 1.00 0.26 \ ATOM 133 N CYS D 19 55.345 73.918 -1.459 1.00 1.71 \ ATOM 134 CA CYS D 19 56.573 73.359 -2.005 1.00 1.71 \ ATOM 135 C CYS D 19 56.543 73.277 -3.524 1.00 1.71 \ ATOM 136 O CYS D 19 57.589 73.435 -4.164 1.00 1.71 \ ATOM 137 CB CYS D 19 56.823 71.975 -1.409 1.00 1.71 \ ATOM 138 SG CYS D 19 56.890 71.960 0.394 1.00 1.71 \ ATOM 139 N GLY D 20 55.373 73.032 -4.114 1.00 -0.15 \ ATOM 140 CA GLY D 20 55.311 72.979 -5.564 1.00 -0.15 \ ATOM 141 C GLY D 20 56.336 72.022 -6.142 1.00 -0.15 \ ATOM 142 O GLY D 20 56.452 70.865 -5.723 1.00 -0.15 \ ATOM 143 N GLU D 21 57.109 72.520 -7.109 1.00 0.19 \ ATOM 144 CA GLU D 21 58.038 71.674 -7.855 1.00 0.19 \ ATOM 145 C GLU D 21 58.982 70.911 -6.931 1.00 0.19 \ ATOM 146 O GLU D 21 59.165 69.697 -7.076 1.00 0.19 \ ATOM 147 CB GLU D 21 58.832 72.525 -8.852 1.00 0.19 \ ATOM 148 CG GLU D 21 59.328 73.860 -8.301 1.00 0.19 \ ATOM 149 CD GLU D 21 58.228 74.905 -8.212 1.00 0.19 \ ATOM 150 OE1 GLU D 21 57.127 74.655 -8.748 1.00 0.19 \ ATOM 151 OE2 GLU D 21 58.461 75.969 -7.600 1.00 0.19 \ ATOM 152 N ARG D 22 59.592 71.609 -5.972 1.00 -0.60 \ ATOM 153 CA ARG D 22 60.613 70.992 -5.131 1.00 -0.60 \ ATOM 154 C ARG D 22 60.074 69.824 -4.314 1.00 -0.60 \ ATOM 155 O ARG D 22 60.857 68.970 -3.885 1.00 -0.60 \ ATOM 156 CB ARG D 22 61.227 72.049 -4.213 1.00 -0.60 \ ATOM 157 CG ARG D 22 61.367 73.408 -4.882 1.00 -0.60 \ ATOM 158 CD ARG D 22 62.229 74.366 -4.079 1.00 -0.60 \ ATOM 159 NE ARG D 22 61.697 74.618 -2.743 1.00 -0.60 \ ATOM 160 CZ ARG D 22 60.640 75.383 -2.489 1.00 -0.60 \ ATOM 161 NH1 ARG D 22 59.984 75.966 -3.484 1.00 -0.60 \ ATOM 162 NH2 ARG D 22 60.233 75.558 -1.240 1.00 -0.60 \ ATOM 163 N GLY D 23 58.764 69.767 -4.086 1.00 1.71 \ ATOM 164 CA GLY D 23 58.171 68.642 -3.391 1.00 1.71 \ ATOM 165 C GLY D 23 58.576 68.563 -1.927 1.00 1.71 \ ATOM 166 O GLY D 23 59.212 69.457 -1.367 1.00 1.71 \ ATOM 167 N PHE D 24 58.189 67.450 -1.306 1.00 1.14 \ ATOM 168 CA PHE D 24 58.469 67.247 0.108 1.00 1.14 \ ATOM 169 C PHE D 24 58.400 65.764 0.434 1.00 1.14 \ ATOM 170 O PHE D 24 57.850 64.962 -0.326 1.00 1.14 \ ATOM 171 CB PHE D 24 57.492 68.032 0.993 1.00 1.14 \ ATOM 172 CG PHE D 24 56.054 67.610 0.839 1.00 1.14 \ ATOM 173 CD1 PHE D 24 55.268 68.139 -0.172 1.00 1.14 \ ATOM 174 CD2 PHE D 24 55.488 66.690 1.708 1.00 1.14 \ ATOM 175 CE1 PHE D 24 53.946 67.756 -0.316 1.00 1.14 \ ATOM 176 CE2 PHE D 24 54.166 66.304 1.569 1.00 1.14 \ ATOM 177 CZ PHE D 24 53.394 66.838 0.555 1.00 1.14 \ ATOM 178 N PHE D 25 58.981 65.415 1.578 1.00 0.52 \ ATOM 179 CA PHE D 25 58.846 64.094 2.174 1.00 0.52 \ ATOM 180 C PHE D 25 57.908 64.189 3.369 1.00 0.52 \ ATOM 181 O PHE D 25 58.033 65.105 4.189 1.00 0.52 \ ATOM 182 CB PHE D 25 60.203 63.544 2.620 1.00 0.52 \ ATOM 183 CG PHE D 25 60.998 62.906 1.517 1.00 0.52 \ ATOM 184 CD1 PHE D 25 61.710 63.683 0.619 1.00 0.52 \ ATOM 185 CD2 PHE D 25 61.047 61.528 1.389 1.00 0.52 \ ATOM 186 CE1 PHE D 25 62.447 63.097 -0.393 1.00 0.52 \ ATOM 187 CE2 PHE D 25 61.783 60.936 0.379 1.00 0.52 \ ATOM 188 CZ PHE D 25 62.483 61.722 -0.513 1.00 0.52 \ ATOM 189 N TRP D 26 56.969 63.253 3.461 1.00 -0.40 \ ATOM 190 CA TRP D 26 56.073 63.143 4.606 1.00 -0.40 \ ATOM 191 C TRP D 26 56.483 61.904 5.391 1.00 -0.40 \ ATOM 192 O TRP D 26 56.375 60.780 4.888 1.00 -0.40 \ ATOM 193 CB TRP D 26 54.613 63.067 4.163 1.00 -0.40 \ ATOM 194 CG TRP D 26 53.648 62.974 5.307 1.00 -0.40 \ ATOM 195 CD1 TRP D 26 53.001 61.855 5.746 1.00 -0.40 \ ATOM 196 CD2 TRP D 26 53.228 64.043 6.165 1.00 -0.40 \ ATOM 197 NE1 TRP D 26 52.200 62.162 6.820 1.00 -0.40 \ ATOM 198 CE2 TRP D 26 52.323 63.497 7.097 1.00 -0.40 \ ATOM 199 CE3 TRP D 26 53.528 65.406 6.234 1.00 -0.40 \ ATOM 200 CZ2 TRP D 26 51.715 64.269 8.086 1.00 -0.40 \ ATOM 201 CZ3 TRP D 26 52.923 66.170 7.216 1.00 -0.40 \ ATOM 202 CH2 TRP D 26 52.028 65.600 8.128 1.00 -0.40 \ ATOM 203 N THR D 27 56.961 62.109 6.616 1.00 -0.98 \ ATOM 204 CA THR D 27 57.484 61.026 7.450 1.00 -0.98 \ ATOM 205 C THR D 27 57.021 61.221 8.885 1.00 -0.98 \ ATOM 206 O THR D 27 57.747 61.767 9.725 1.00 -0.98 \ ATOM 207 CB THR D 27 59.011 60.963 7.374 1.00 -0.98 \ ATOM 208 OG1 THR D 27 59.557 62.268 7.604 1.00 -0.98 \ ATOM 209 CG2 THR D 27 59.457 60.464 6.007 1.00 -0.98 \ ATOM 210 N PRO D 28 55.798 60.776 9.210 1.00 -0.79 \ ATOM 211 CA PRO D 28 55.268 60.824 10.576 1.00 -0.79 \ ATOM 212 C PRO D 28 56.155 60.080 11.571 1.00 -0.79 \ ATOM 213 O PRO D 28 56.408 60.607 12.654 1.00 -0.79 \ ATOM 214 CB PRO D 28 53.897 60.143 10.450 1.00 -0.79 \ ATOM 215 CG PRO D 28 53.939 59.402 9.146 1.00 -0.79 \ ATOM 216 CD PRO D 28 54.824 60.214 8.261 1.00 -0.79 \ """, "e6ck2D1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6ck2D1_csv", state=0, origin=1) cmd.zoom("e6ck2D1_csv", animate=-1)