cmd.read_pdbstr("""\ ATOM 1 N LYS B 56 12.914 21.402 60.301 1.00 -0.19 \ ATOM 2 CA LYS B 56 12.943 21.185 61.714 1.00 -0.19 \ ATOM 3 C LYS B 56 13.116 22.539 62.395 1.00 -0.19 \ ATOM 4 O LYS B 56 13.807 23.421 61.863 1.00 -0.19 \ ATOM 5 CB LYS B 56 14.102 20.253 62.078 1.00 -0.19 \ ATOM 6 CG LYS B 56 13.846 18.790 61.753 1.00 -0.19 \ ATOM 7 CD LYS B 56 14.948 17.856 62.202 1.00 -0.19 \ ATOM 8 CE LYS B 56 14.492 16.411 62.239 1.00 -0.19 \ ATOM 9 NZ LYS B 56 15.553 15.496 61.758 1.00 -0.19 \ ATOM 10 N CYS B 57 12.507 22.682 63.576 1.00 2.02 \ ATOM 11 CA CYS B 57 12.651 23.884 64.367 1.00 2.02 \ ATOM 12 C CYS B 57 14.127 24.097 64.710 1.00 2.02 \ ATOM 13 O CYS B 57 14.780 23.186 65.190 1.00 2.02 \ ATOM 14 CB CYS B 57 11.850 23.818 65.662 1.00 2.02 \ ATOM 15 SG CYS B 57 12.015 25.339 66.630 1.00 2.02 \ ATOM 16 N ALA B 58 14.624 25.314 64.484 1.00 -0.61 \ ATOM 17 CA ALA B 58 16.020 25.694 64.775 1.00 -0.61 \ ATOM 18 C ALA B 58 16.348 25.524 66.264 1.00 -0.61 \ ATOM 19 O ALA B 58 17.502 25.278 66.639 1.00 -0.61 \ ATOM 20 CB ALA B 58 16.250 27.124 64.364 1.00 -0.61 \ ATOM 21 N ASP B 59 15.336 25.716 67.110 1.00 -0.92 \ ATOM 22 CA ASP B 59 15.495 25.688 68.544 1.00 -0.92 \ ATOM 23 C ASP B 59 15.395 24.238 69.036 1.00 -0.92 \ ATOM 24 O ASP B 59 16.400 23.662 69.420 1.00 -0.92 \ ATOM 25 CB ASP B 59 14.474 26.623 69.197 1.00 -0.92 \ ATOM 26 CG ASP B 59 14.761 26.934 70.653 1.00 -0.92 \ ATOM 27 OD1 ASP B 59 15.567 26.202 71.267 1.00 -0.92 \ ATOM 28 OD2 ASP B 59 14.171 27.909 71.159 1.00 -0.92 \ ATOM 29 N CYS B 60 14.186 23.664 68.985 1.00 2.02 \ ATOM 30 CA CYS B 60 13.844 22.411 69.667 1.00 2.02 \ ATOM 31 C CYS B 60 14.041 21.182 68.759 1.00 2.02 \ ATOM 32 O CYS B 60 13.925 20.064 69.231 1.00 2.02 \ ATOM 33 CB CYS B 60 12.410 22.464 70.188 1.00 2.02 \ ATOM 34 SG CYS B 60 11.130 22.366 68.903 1.00 2.02 \ ATOM 35 N GLN B 61 14.308 21.396 67.461 1.00 -0.91 \ ATOM 36 CA GLN B 61 14.660 20.341 66.481 1.00 -0.91 \ ATOM 37 C GLN B 61 13.458 19.473 66.095 1.00 -0.91 \ ATOM 38 O GLN B 61 13.636 18.514 65.343 1.00 -0.91 \ ATOM 39 CB GLN B 61 15.766 19.406 66.981 1.00 -0.91 \ ATOM 40 CG GLN B 61 17.031 20.116 67.432 1.00 -0.91 \ ATOM 41 CD GLN B 61 17.506 21.123 66.415 1.00 -0.91 \ ATOM 42 OE1 GLN B 61 17.715 20.813 65.242 1.00 -0.91 \ ATOM 43 NE2 GLN B 61 17.650 22.359 66.860 1.00 -0.91 \ ATOM 44 N MET B 62 12.249 19.796 66.566 1.00 -0.88 \ ATOM 45 CA MET B 62 11.086 18.993 66.225 1.00 -0.88 \ ATOM 46 C MET B 62 10.749 19.254 64.752 1.00 -0.88 \ ATOM 47 O MET B 62 10.871 20.394 64.266 1.00 -0.88 \ ATOM 48 CB MET B 62 9.876 19.304 67.121 1.00 -0.88 \ ATOM 49 CG MET B 62 8.968 20.421 66.615 1.00 -0.88 \ ATOM 50 SD MET B 62 7.469 20.674 67.630 1.00 -0.88 \ ATOM 51 CE MET B 62 6.350 21.373 66.416 1.00 -0.88 \ ATOM 52 N GLN B 63 10.335 18.188 64.055 1.00 -0.49 \ ATOM 53 CA GLN B 63 9.868 18.254 62.680 1.00 -0.49 \ ATOM 54 C GLN B 63 8.672 19.212 62.583 1.00 -0.49 \ ATOM 55 O GLN B 63 7.760 19.178 63.411 1.00 -0.49 \ ATOM 56 CB GLN B 63 9.452 16.870 62.170 1.00 -0.49 \ ATOM 57 CG GLN B 63 9.357 16.818 60.652 1.00 -0.49 \ ATOM 58 CD GLN B 63 8.407 15.783 60.098 1.00 -0.49 \ ATOM 59 OE1 GLN B 63 8.098 14.776 60.738 1.00 -0.49 \ ATOM 60 NE2 GLN B 63 7.952 16.020 58.875 1.00 -0.49 \ ATOM 61 N LEU B 64 8.677 20.042 61.537 1.00 1.23 \ ATOM 62 CA LEU B 64 7.586 20.945 61.246 1.00 1.23 \ ATOM 63 C LEU B 64 6.656 20.248 60.233 1.00 1.23 \ ATOM 64 O LEU B 64 6.855 20.318 59.027 1.00 1.23 \ ATOM 65 CB LEU B 64 8.164 22.273 60.732 1.00 1.23 \ ATOM 66 CG LEU B 64 9.247 22.912 61.609 1.00 1.23 \ ATOM 67 CD1 LEU B 64 9.853 24.142 60.948 1.00 1.23 \ ATOM 68 CD2 LEU B 64 8.693 23.284 62.970 1.00 1.23 \ ATOM 69 N ALA B 65 5.670 19.508 60.745 1.00 -1.29 \ ATOM 70 CA ALA B 65 4.656 18.853 59.898 1.00 -1.29 \ ATOM 71 C ALA B 65 3.539 19.850 59.563 1.00 -1.29 \ ATOM 72 O ALA B 65 3.090 19.925 58.420 1.00 -1.29 \ ATOM 73 CB ALA B 65 4.101 17.630 60.590 1.00 -1.29 \ ATOM 74 N ASP B 66 3.121 20.624 60.569 1.00 -0.25 \ ATOM 75 CA ASP B 66 1.888 21.397 60.525 1.00 -0.25 \ ATOM 76 C ASP B 66 2.154 22.758 59.868 1.00 -0.25 \ ATOM 77 O ASP B 66 1.736 23.010 58.725 1.00 -0.25 \ ATOM 78 CB ASP B 66 1.291 21.520 61.931 1.00 -0.25 \ ATOM 79 CG ASP B 66 1.098 20.187 62.646 1.00 -0.25 \ ATOM 80 OD1 ASP B 66 2.106 19.618 63.116 1.00 -0.25 \ ATOM 81 OD2 ASP B 66 -0.059 19.722 62.729 1.00 -0.25 \ ATOM 82 N ARG B 67 2.854 23.630 60.596 1.00 -0.35 \ ATOM 83 CA ARG B 67 3.103 25.006 60.161 1.00 -0.35 \ ATOM 84 C ARG B 67 4.598 25.294 60.272 1.00 -0.35 \ ATOM 85 O ARG B 67 5.270 24.753 61.136 1.00 -0.35 \ ATOM 86 CB ARG B 67 2.332 26.025 61.010 1.00 -0.35 \ ATOM 87 CG ARG B 67 0.817 25.897 60.950 1.00 -0.35 \ ATOM 88 CD ARG B 67 0.214 26.095 59.572 1.00 -0.35 \ ATOM 89 NE ARG B 67 0.041 27.486 59.175 1.00 -0.35 \ ATOM 90 CZ ARG B 67 -0.742 27.879 58.171 1.00 -0.35 \ ATOM 91 NH1 ARG B 67 -1.502 27.001 57.540 1.00 -0.35 \ ATOM 92 NH2 ARG B 67 -0.747 29.138 57.779 1.00 -0.35 \ ATOM 93 N CYS B 68 5.092 26.153 59.381 1.00 0.21 \ ATOM 94 CA CYS B 68 6.468 26.581 59.395 1.00 0.21 \ ATOM 95 C CYS B 68 6.507 28.091 59.636 1.00 0.21 \ ATOM 96 O CYS B 68 5.903 28.843 58.890 1.00 0.21 \ ATOM 97 CB CYS B 68 7.172 26.245 58.085 1.00 0.21 \ ATOM 98 SG CYS B 68 8.879 26.851 58.042 1.00 0.21 \ ATOM 99 N PHE B 69 7.200 28.503 60.698 1.00 -0.07 \ ATOM 100 CA PHE B 69 7.424 29.920 60.999 1.00 -0.07 \ ATOM 101 C PHE B 69 8.854 30.310 60.607 1.00 -0.07 \ ATOM 102 O PHE B 69 9.810 29.868 61.229 1.00 -0.07 \ ATOM 103 CB PHE B 69 7.159 30.187 62.484 1.00 -0.07 \ ATOM 104 CG PHE B 69 5.724 29.997 62.906 1.00 -0.07 \ ATOM 105 CD1 PHE B 69 5.196 28.726 63.079 1.00 -0.07 \ ATOM 106 CD2 PHE B 69 4.904 31.092 63.148 1.00 -0.07 \ ATOM 107 CE1 PHE B 69 3.873 28.553 63.455 1.00 -0.07 \ ATOM 108 CE2 PHE B 69 3.585 30.917 63.534 1.00 -0.07 \ ATOM 109 CZ PHE B 69 3.074 29.649 63.688 1.00 -0.07 \ ATOM 110 N SER B 70 8.976 31.162 59.586 1.00 -0.66 \ ATOM 111 CA SER B 70 10.249 31.575 59.003 1.00 -0.66 \ ATOM 112 C SER B 70 10.635 32.954 59.543 1.00 -0.66 \ ATOM 113 O SER B 70 9.790 33.834 59.665 1.00 -0.66 \ ATOM 114 CB SER B 70 10.150 31.629 57.501 1.00 -0.66 \ ATOM 115 OG SER B 70 9.497 30.475 57.005 1.00 -0.66 \ ATOM 116 N ARG B 71 11.915 33.142 59.837 1.00 -0.67 \ ATOM 117 CA ARG B 71 12.451 34.462 60.141 1.00 -0.67 \ ATOM 118 C ARG B 71 13.941 34.419 59.800 1.00 -0.67 \ ATOM 119 O ARG B 71 14.655 33.506 60.243 1.00 -0.67 \ ATOM 120 CB ARG B 71 12.171 34.856 61.596 1.00 -0.67 \ ATOM 121 CG ARG B 71 12.894 36.104 62.089 1.00 -0.67 \ ATOM 122 CD ARG B 71 12.406 37.404 61.473 1.00 -0.67 \ ATOM 123 NE ARG B 71 11.006 37.667 61.778 1.00 -0.67 \ ATOM 124 CZ ARG B 71 10.546 38.297 62.861 1.00 -0.67 \ ATOM 125 NH1 ARG B 71 11.377 38.781 63.766 1.00 -0.67 \ ATOM 126 NH2 ARG B 71 9.243 38.432 63.029 1.00 -0.67 \ ATOM 127 N ALA B 72 14.360 35.373 58.956 1.00 -0.82 \ ATOM 128 CA ALA B 72 15.732 35.524 58.518 1.00 -0.82 \ ATOM 129 C ALA B 72 16.172 34.207 57.849 1.00 -0.82 \ ATOM 130 O ALA B 72 15.500 33.747 56.934 1.00 -0.82 \ ATOM 131 CB ALA B 72 16.573 35.967 59.694 1.00 -0.82 \ ATOM 132 N GLY B 73 17.248 33.578 58.327 1.00 0.08 \ ATOM 133 CA GLY B 73 17.795 32.373 57.715 1.00 0.08 \ ATOM 134 C GLY B 73 17.376 31.074 58.388 1.00 0.08 \ ATOM 135 O GLY B 73 18.010 30.061 58.145 1.00 0.08 \ ATOM 136 N SER B 74 16.316 31.093 59.214 1.00 -0.63 \ ATOM 137 CA SER B 74 15.955 29.936 60.032 1.00 -0.63 \ ATOM 138 C SER B 74 14.436 29.701 60.061 1.00 -0.63 \ ATOM 139 O SER B 74 13.650 30.521 59.581 1.00 -0.63 \ ATOM 140 CB SER B 74 16.532 30.097 61.400 1.00 -0.63 \ ATOM 141 OG SER B 74 17.944 30.234 61.320 1.00 -0.63 \ ATOM 142 N VAL B 75 14.046 28.541 60.599 1.00 -0.23 \ ATOM 143 CA VAL B 75 12.657 28.110 60.680 1.00 -0.23 \ ATOM 144 C VAL B 75 12.391 27.593 62.100 1.00 -0.23 \ ATOM 145 O VAL B 75 13.300 27.072 62.754 1.00 -0.23 \ ATOM 146 CB VAL B 75 12.313 27.054 59.610 1.00 -0.23 \ ATOM 147 CG1 VAL B 75 12.315 27.664 58.227 1.00 -0.23 \ ATOM 148 CG2 VAL B 75 13.238 25.847 59.657 1.00 -0.23 \ ATOM 149 N TYR B 76 11.148 27.787 62.569 1.00 0.32 \ ATOM 150 CA TYR B 76 10.767 27.539 63.958 1.00 0.32 \ ATOM 151 C TYR B 76 9.379 26.893 64.042 1.00 0.32 \ ATOM 152 O TYR B 76 8.562 27.030 63.119 1.00 0.32 \ ATOM 153 CB TYR B 76 10.725 28.852 64.741 1.00 0.32 \ ATOM 154 CG TYR B 76 12.004 29.635 64.685 1.00 0.32 \ ATOM 155 CD1 TYR B 76 12.285 30.463 63.609 1.00 0.32 \ ATOM 156 CD2 TYR B 76 12.941 29.543 65.697 1.00 0.32 \ ATOM 157 CE1 TYR B 76 13.460 31.189 63.549 1.00 0.32 \ ATOM 158 CE2 TYR B 76 14.125 30.258 65.644 1.00 0.32 \ ATOM 159 CZ TYR B 76 14.387 31.086 64.567 1.00 0.32 \ ATOM 160 OH TYR B 76 15.543 31.820 64.526 1.00 0.32 \ ATOM 161 N CYS B 77 9.123 26.225 65.176 1.00 2.02 \ ATOM 162 CA CYS B 77 7.768 25.906 65.591 1.00 2.02 \ ATOM 163 C CYS B 77 7.127 27.176 66.164 1.00 2.02 \ ATOM 164 O CYS B 77 7.814 28.168 66.405 1.00 2.02 \ ATOM 165 CB CYS B 77 7.733 24.777 66.613 1.00 2.02 \ ATOM 166 SG CYS B 77 8.504 25.214 68.190 1.00 2.02 \ ATOM 167 N LYS B 78 5.804 27.135 66.337 1.00 0.69 \ ATOM 168 CA LYS B 78 5.019 28.273 66.811 1.00 0.69 \ ATOM 169 C LYS B 78 5.616 28.791 68.129 1.00 0.69 \ ATOM 170 O LYS B 78 5.891 29.985 68.285 1.00 0.69 \ ATOM 171 CB LYS B 78 3.554 27.852 66.959 1.00 0.69 \ ATOM 172 CG LYS B 78 2.589 28.959 67.371 1.00 0.69 \ ATOM 173 CD LYS B 78 1.134 28.595 67.115 1.00 0.69 \ ATOM 174 CE LYS B 78 0.139 29.636 67.589 1.00 0.69 \ ATOM 175 NZ LYS B 78 -0.140 29.505 69.038 1.00 0.69 \ ATOM 176 N GLU B 79 5.874 27.872 69.057 1.00 -1.06 \ ATOM 177 CA GLU B 79 6.264 28.231 70.421 1.00 -1.06 \ ATOM 178 C GLU B 79 7.624 28.943 70.418 1.00 -1.06 \ ATOM 179 O GLU B 79 7.778 30.002 71.016 1.00 -1.06 \ ATOM 180 CB GLU B 79 6.277 26.989 71.316 1.00 -1.06 \ ATOM 181 CG GLU B 79 4.885 26.506 71.704 1.00 -1.06 \ ATOM 182 CD GLU B 79 4.090 25.819 70.603 1.00 -1.06 \ ATOM 183 OE1 GLU B 79 2.834 25.827 70.692 1.00 -1.06 \ ATOM 184 OE2 GLU B 79 4.724 25.268 69.656 1.00 -1.06 \ ATOM 185 N ASP B 80 8.612 28.359 69.734 1.00 1.36 \ ATOM 186 CA ASP B 80 9.970 28.866 69.785 1.00 1.36 \ ATOM 187 C ASP B 80 10.052 30.170 68.985 1.00 1.36 \ ATOM 188 O ASP B 80 10.937 30.981 69.256 1.00 1.36 \ ATOM 189 CB ASP B 80 10.986 27.810 69.336 1.00 1.36 \ ATOM 190 CG ASP B 80 11.128 26.652 70.312 1.00 1.36 \ ATOM 191 OD1 ASP B 80 11.086 26.918 71.526 1.00 1.36 \ ATOM 192 OD2 ASP B 80 11.281 25.488 69.852 1.00 1.36 \ ATOM 193 N PHE B 81 9.145 30.347 68.006 1.00 0.06 \ ATOM 194 CA PHE B 81 9.076 31.559 67.204 1.00 0.06 \ ATOM 195 C PHE B 81 8.704 32.731 68.119 1.00 0.06 \ ATOM 196 O PHE B 81 9.459 33.697 68.232 1.00 0.06 \ ATOM 197 CB PHE B 81 8.078 31.427 66.050 1.00 0.06 \ ATOM 198 CG PHE B 81 7.967 32.660 65.187 1.00 0.06 \ ATOM 199 CD1 PHE B 81 8.890 32.913 64.185 1.00 0.06 \ ATOM 200 CD2 PHE B 81 6.966 33.598 65.411 1.00 0.06 \ ATOM 201 CE1 PHE B 81 8.794 34.056 63.403 1.00 0.06 \ ATOM 202 CE2 PHE B 81 6.875 34.742 64.631 1.00 0.06 \ ATOM 203 CZ PHE B 81 7.791 34.970 63.629 1.00 0.06 \ ATOM 204 N PHE B 82 7.562 32.604 68.802 1.00 -0.74 \ ATOM 205 CA PHE B 82 7.025 33.686 69.628 1.00 -0.74 \ ATOM 206 C PHE B 82 7.877 33.866 70.884 1.00 -0.74 \ ATOM 207 O PHE B 82 7.897 34.942 71.447 1.00 -0.74 \ ATOM 208 CB PHE B 82 5.558 33.443 69.984 1.00 -0.74 \ ATOM 209 CG PHE B 82 4.623 33.687 68.832 1.00 -0.74 \ ATOM 210 CD1 PHE B 82 4.489 34.960 68.294 1.00 -0.74 \ ATOM 211 CD2 PHE B 82 3.910 32.642 68.266 1.00 -0.74 \ ATOM 212 CE1 PHE B 82 3.645 35.185 67.221 1.00 -0.74 \ ATOM 213 CE2 PHE B 82 3.061 32.872 67.197 1.00 -0.74 \ ATOM 214 CZ PHE B 82 2.936 34.139 66.673 1.00 -0.74 \ ATOM 215 N LYS B 83 8.589 32.813 71.284 1.00 -0.99 \ ATOM 216 CA LYS B 83 9.472 32.876 72.429 1.00 -0.99 \ ATOM 217 C LYS B 83 10.540 33.953 72.202 1.00 -0.99 \ ATOM 218 O LYS B 83 10.980 34.572 73.173 1.00 -0.99 \ ATOM 219 CB LYS B 83 10.096 31.502 72.694 1.00 -0.99 \ ATOM 220 CG LYS B 83 10.733 31.331 74.066 1.00 -0.99 \ ATOM 221 CD LYS B 83 11.400 29.985 74.254 1.00 -0.99 \ ATOM 222 CE LYS B 83 12.655 29.831 73.421 1.00 -0.99 \ ATOM 223 NZ LYS B 83 13.129 28.428 73.417 1.00 -0.99 \ ATOM 224 N ARG B 84 10.941 34.189 70.941 1.00 0.08 \ ATOM 225 CA ARG B 84 12.047 35.126 70.660 1.00 0.08 \ ATOM 226 C ARG B 84 11.644 36.280 69.734 1.00 0.08 \ ATOM 227 O ARG B 84 12.329 37.296 69.734 1.00 0.08 \ ATOM 228 CB ARG B 84 13.281 34.404 70.103 1.00 0.08 \ ATOM 229 CG ARG B 84 13.017 33.466 68.938 1.00 0.08 \ ATOM 230 CD ARG B 84 14.284 32.808 68.406 1.00 0.08 \ ATOM 231 NE ARG B 84 15.178 32.250 69.416 1.00 0.08 \ ATOM 232 CZ ARG B 84 15.090 31.021 69.917 1.00 0.08 \ ATOM 233 NH1 ARG B 84 14.031 30.272 69.660 1.00 0.08 \ ATOM 234 NH2 ARG B 84 16.063 30.544 70.676 1.00 0.08 \ ATOM 235 N PHE B 85 10.574 36.144 68.943 1.00 -1.00 \ ATOM 236 CA PHE B 85 10.223 37.181 67.987 1.00 -1.00 \ ATOM 237 C PHE B 85 8.843 37.761 68.300 1.00 -1.00 \ ATOM 238 O PHE B 85 7.963 37.086 68.829 1.00 -1.00 \ ATOM 239 CB PHE B 85 10.227 36.647 66.553 1.00 -1.00 \ ATOM 240 CG PHE B 85 11.536 36.041 66.125 1.00 -1.00 \ ATOM 241 CD1 PHE B 85 12.701 36.792 66.137 1.00 -1.00 \ ATOM 242 CD2 PHE B 85 11.604 34.720 65.720 1.00 -1.00 \ ATOM 243 CE1 PHE B 85 13.910 36.232 65.751 1.00 -1.00 \ ATOM 244 CE2 PHE B 85 12.811 34.164 65.332 1.00 -1.00 \ ATOM 245 CZ PHE B 85 13.962 34.919 65.344 1.00 -1.00 \ ATOM 246 N GLY B 86 8.681 39.033 67.940 1.00 -1.00 \ ATOM 247 CA GLY B 86 7.396 39.684 67.914 1.00 -1.00 \ ATOM 248 C GLY B 86 6.980 39.962 66.484 1.00 -1.00 \ ATOM 249 O GLY B 86 7.604 39.476 65.539 1.00 -1.00 \ """, "e6cmeB3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6cmeB3_csv", state=0, origin=1) cmd.zoom("e6cmeB3_csv", animate=-1)