cmd.read_pdbstr("""\ ATOM 1 N PRO B 538 -21.312 80.965 57.513 1.00 2.13 \ ATOM 2 CA PRO B 538 -19.941 81.305 57.116 1.00 2.13 \ ATOM 3 C PRO B 538 -19.586 82.759 57.416 1.00 2.13 \ ATOM 4 O PRO B 538 -20.204 83.675 56.873 1.00 2.13 \ ATOM 5 CB PRO B 538 -19.939 81.043 55.607 1.00 2.13 \ ATOM 6 CG PRO B 538 -21.360 81.218 55.197 1.00 2.13 \ ATOM 7 CD PRO B 538 -22.180 80.714 56.350 1.00 2.13 \ ATOM 8 N LEU B 539 -18.594 82.961 58.279 1.00 2.01 \ ATOM 9 CA LEU B 539 -18.153 84.297 58.648 1.00 2.01 \ ATOM 10 C LEU B 539 -17.079 84.780 57.683 1.00 2.01 \ ATOM 11 O LEU B 539 -16.158 84.036 57.336 1.00 2.01 \ ATOM 12 CB LEU B 539 -17.618 84.313 60.080 1.00 2.01 \ ATOM 13 CG LEU B 539 -18.604 83.882 61.167 1.00 2.01 \ ATOM 14 CD1 LEU B 539 -17.944 83.935 62.536 1.00 2.01 \ ATOM 15 CD2 LEU B 539 -19.854 84.748 61.134 1.00 2.01 \ ATOM 16 N ALA B 540 -17.208 86.030 57.251 1.00 0.71 \ ATOM 17 CA ALA B 540 -16.254 86.590 56.307 1.00 0.71 \ ATOM 18 C ALA B 540 -14.896 86.779 56.979 1.00 0.71 \ ATOM 19 O ALA B 540 -14.830 87.150 58.156 1.00 0.71 \ ATOM 20 CB ALA B 540 -16.759 87.924 55.760 1.00 0.71 \ ATOM 21 N PRO B 541 -13.799 86.529 56.266 1.00 0.42 \ ATOM 22 CA PRO B 541 -12.475 86.712 56.871 1.00 0.42 \ ATOM 23 C PRO B 541 -12.153 88.186 57.060 1.00 0.42 \ ATOM 24 O PRO B 541 -12.524 89.033 56.244 1.00 0.42 \ ATOM 25 CB PRO B 541 -11.530 86.055 55.859 1.00 0.42 \ ATOM 26 CG PRO B 541 -12.248 86.175 54.555 1.00 0.42 \ ATOM 27 CD PRO B 541 -13.713 86.043 54.877 1.00 0.42 \ ATOM 28 N GLN B 542 -11.459 88.488 58.158 1.00 0.68 \ ATOM 29 CA GLN B 542 -11.046 89.852 58.459 1.00 0.68 \ ATOM 30 C GLN B 542 -9.611 90.153 58.056 1.00 0.68 \ ATOM 31 O GLN B 542 -9.241 91.330 57.977 1.00 0.68 \ ATOM 32 CB GLN B 542 -11.210 90.144 59.956 1.00 0.68 \ ATOM 33 CG GLN B 542 -12.573 90.695 60.336 1.00 0.68 \ ATOM 34 CD GLN B 542 -12.611 91.206 61.763 1.00 0.68 \ ATOM 35 OE1 GLN B 542 -12.254 90.492 62.700 1.00 0.68 \ ATOM 36 NE2 GLN B 542 -13.036 92.452 61.933 1.00 0.68 \ ATOM 37 N GLU B 543 -8.801 89.131 57.804 1.00 0.09 \ ATOM 38 CA GLU B 543 -7.413 89.299 57.408 1.00 0.09 \ ATOM 39 C GLU B 543 -7.214 88.746 56.002 1.00 0.09 \ ATOM 40 O GLU B 543 -8.054 88.013 55.473 1.00 0.09 \ ATOM 41 CB GLU B 543 -6.474 88.607 58.403 1.00 0.09 \ ATOM 42 CG GLU B 543 -6.634 89.101 59.834 1.00 0.09 \ ATOM 43 CD GLU B 543 -5.754 88.351 60.812 1.00 0.09 \ ATOM 44 OE1 GLU B 543 -5.606 88.819 61.959 1.00 0.09 \ ATOM 45 OE2 GLU B 543 -5.209 87.292 60.432 1.00 0.09 \ ATOM 46 N ILE B 544 -6.081 89.112 55.396 1.00 -0.15 \ ATOM 47 CA ILE B 544 -5.833 88.754 54.006 1.00 -0.15 \ ATOM 48 C ILE B 544 -5.743 87.240 53.863 1.00 -0.15 \ ATOM 49 O ILE B 544 -5.153 86.545 54.700 1.00 -0.15 \ ATOM 50 CB ILE B 544 -4.563 89.457 53.495 1.00 -0.15 \ ATOM 51 CG1 ILE B 544 -4.365 89.198 51.999 1.00 -0.15 \ ATOM 52 CG2 ILE B 544 -3.337 89.032 54.300 1.00 -0.15 \ ATOM 53 CD1 ILE B 544 -3.262 90.030 51.376 1.00 -0.15 \ ATOM 54 N THR B 545 -6.351 86.719 52.799 1.00 -0.37 \ ATOM 55 CA THR B 545 -6.465 85.284 52.582 1.00 -0.37 \ ATOM 56 C THR B 545 -5.328 84.711 51.744 1.00 -0.37 \ ATOM 57 O THR B 545 -5.381 83.532 51.379 1.00 -0.37 \ ATOM 58 CB THR B 545 -7.807 84.956 51.919 1.00 -0.37 \ ATOM 59 OG1 THR B 545 -7.937 85.698 50.699 1.00 -0.37 \ ATOM 60 CG2 THR B 545 -8.959 85.308 52.848 1.00 -0.37 \ ATOM 61 N HIS B 546 -4.307 85.507 51.436 1.00 -0.36 \ ATOM 62 CA HIS B 546 -3.174 85.032 50.655 1.00 -0.36 \ ATOM 63 C HIS B 546 -1.943 85.846 51.023 1.00 -0.36 \ ATOM 64 O HIS B 546 -2.046 87.014 51.406 1.00 -0.36 \ ATOM 65 CB HIS B 546 -3.454 85.121 49.150 1.00 -0.36 \ ATOM 66 CG HIS B 546 -4.009 86.442 48.717 1.00 -0.36 \ ATOM 67 ND1 HIS B 546 -3.210 87.483 48.296 1.00 -0.36 \ ATOM 68 CD2 HIS B 546 -5.284 86.893 48.645 1.00 -0.36 \ ATOM 69 CE1 HIS B 546 -3.969 88.517 47.980 1.00 -0.36 \ ATOM 70 NE2 HIS B 546 -5.232 88.185 48.184 1.00 -0.36 \ ATOM 71 N CYS B 547 -0.775 85.216 50.905 1.00 0.55 \ ATOM 72 CA CYS B 547 0.483 85.839 51.304 1.00 0.55 \ ATOM 73 C CYS B 547 1.581 85.523 50.297 1.00 0.55 \ ATOM 74 O CYS B 547 2.735 85.284 50.665 1.00 0.55 \ ATOM 75 CB CYS B 547 0.897 85.393 52.706 1.00 0.55 \ ATOM 76 SG CYS B 547 1.188 83.614 52.876 1.00 0.55 \ ATOM 77 N HIS B 548 1.240 85.524 49.010 1.00 -0.01 \ ATOM 78 CA HIS B 548 2.203 85.239 47.956 1.00 -0.01 \ ATOM 79 C HIS B 548 2.726 86.500 47.277 1.00 -0.01 \ ATOM 80 O HIS B 548 3.456 86.398 46.285 1.00 -0.01 \ ATOM 81 CB HIS B 548 1.588 84.298 46.918 1.00 -0.01 \ ATOM 82 CG HIS B 548 0.365 84.847 46.254 1.00 -0.01 \ ATOM 83 ND1 HIS B 548 -0.898 84.697 46.782 1.00 -0.01 \ ATOM 84 CD2 HIS B 548 0.213 85.547 45.105 1.00 -0.01 \ ATOM 85 CE1 HIS B 548 -1.777 85.281 45.988 1.00 -0.01 \ ATOM 86 NE2 HIS B 548 -1.129 85.804 44.963 1.00 -0.01 \ ATOM 87 N ASP B 549 2.374 87.682 47.784 1.00 3.25 \ ATOM 88 CA ASP B 549 2.905 88.933 47.263 1.00 3.25 \ ATOM 89 C ASP B 549 3.872 89.622 48.214 1.00 3.25 \ ATOM 90 O ASP B 549 4.584 90.539 47.789 1.00 3.25 \ ATOM 91 CB ASP B 549 1.766 89.903 46.916 1.00 3.25 \ ATOM 92 CG ASP B 549 0.941 89.432 45.736 1.00 3.25 \ ATOM 93 OD1 ASP B 549 -0.274 89.202 45.908 1.00 3.25 \ ATOM 94 OD2 ASP B 549 1.515 89.276 44.638 1.00 3.25 \ ATOM 95 N GLU B 550 3.913 89.217 49.483 1.00 0.35 \ ATOM 96 CA GLU B 550 4.858 89.763 50.443 1.00 0.35 \ ATOM 97 C GLU B 550 5.948 88.778 50.839 1.00 0.35 \ ATOM 98 O GLU B 550 6.903 89.181 51.512 1.00 0.35 \ ATOM 99 CB GLU B 550 4.126 90.237 51.708 1.00 0.35 \ ATOM 100 CG GLU B 550 3.565 91.650 51.633 1.00 0.35 \ ATOM 101 CD GLU B 550 2.506 91.808 50.561 1.00 0.35 \ ATOM 102 OE1 GLU B 550 2.607 92.763 49.761 1.00 0.35 \ ATOM 103 OE2 GLU B 550 1.577 90.975 50.516 1.00 0.35 \ ATOM 104 N ASP B 551 5.832 87.510 50.440 1.00 -0.18 \ ATOM 105 CA ASP B 551 6.794 86.467 50.792 1.00 -0.18 \ ATOM 106 C ASP B 551 6.946 86.363 52.313 1.00 -0.18 \ ATOM 107 O ASP B 551 8.040 86.473 52.867 1.00 -0.18 \ ATOM 108 CB ASP B 551 8.148 86.714 50.116 1.00 -0.18 \ ATOM 109 CG ASP B 551 8.973 85.448 49.983 1.00 -0.18 \ ATOM 110 OD1 ASP B 551 9.463 85.178 48.868 1.00 -0.18 \ ATOM 111 OD2 ASP B 551 9.116 84.710 50.979 1.00 -0.18 \ ATOM 112 N ASP B 552 5.817 86.158 52.983 1.00 1.31 \ ATOM 113 CA ASP B 552 5.799 86.116 54.441 1.00 1.31 \ ATOM 114 C ASP B 552 4.860 85.022 54.944 1.00 1.31 \ ATOM 115 O ASP B 552 5.104 84.404 55.980 1.00 1.31 \ ATOM 116 CB ASP B 552 5.381 87.477 55.006 1.00 1.31 \ ATOM 117 CG ASP B 552 3.905 87.762 54.803 1.00 1.31 \ ATOM 118 OD1 ASP B 552 3.180 87.910 55.809 1.00 1.31 \ ATOM 119 OD2 ASP B 552 3.464 87.817 53.635 1.00 1.31 \ """, "e6ddoB1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6ddoB1_csv", state=0, origin=1) cmd.zoom("e6ddoB1_csv", animate=-1)