cmd.read_pdbstr("""\ ATOM 1 N GLU L 333 -54.996 25.508 24.720 1.00 0.04 \ ATOM 2 CA GLU L 333 -55.776 26.540 23.944 1.00 0.04 \ ATOM 3 C GLU L 333 -56.751 26.015 22.801 1.00 0.04 \ ATOM 4 O GLU L 333 -57.831 26.631 22.659 1.00 0.04 \ ATOM 5 CB GLU L 333 -54.832 27.593 23.366 1.00 0.04 \ ATOM 6 CG GLU L 333 -55.556 28.850 22.899 1.00 0.04 \ ATOM 7 CD GLU L 333 -56.123 29.937 23.882 1.00 0.04 \ ATOM 8 OE1 GLU L 333 -55.779 31.029 23.417 1.00 0.04 \ ATOM 9 OE2 GLU L 333 -57.011 29.886 24.886 1.00 0.04 \ ATOM 10 N ALA L 334 -56.340 24.961 21.994 1.00 0.84 \ ATOM 11 CA ALA L 334 -57.174 24.253 20.884 1.00 0.84 \ ATOM 12 C ALA L 334 -57.505 25.279 19.784 1.00 0.84 \ ATOM 13 O ALA L 334 -58.672 25.480 19.400 1.00 0.84 \ ATOM 14 CB ALA L 334 -58.459 23.716 21.525 1.00 0.84 \ ATOM 15 N ASP L 335 -56.521 26.091 19.426 1.00 0.04 \ ATOM 16 CA ASP L 335 -56.764 27.247 18.658 1.00 0.04 \ ATOM 17 C ASP L 335 -56.069 26.956 17.276 1.00 0.04 \ ATOM 18 O ASP L 335 -55.773 27.964 16.602 1.00 0.04 \ ATOM 19 CB ASP L 335 -56.456 28.759 19.274 1.00 0.04 \ ATOM 20 CG ASP L 335 -55.019 28.944 19.520 1.00 0.04 \ ATOM 21 OD1 ASP L 335 -54.339 27.877 19.514 1.00 0.04 \ ATOM 22 OD2 ASP L 335 -54.529 30.084 19.633 1.00 0.04 \ ATOM 23 N CYS L 336 -56.110 25.713 16.809 1.00 0.84 \ ATOM 24 CA CYS L 336 -55.604 25.480 15.404 1.00 0.84 \ ATOM 25 C CYS L 336 -56.390 26.324 14.430 1.00 0.84 \ ATOM 26 O CYS L 336 -57.578 26.574 14.604 1.00 0.84 \ ATOM 27 CB CYS L 336 -55.610 24.019 14.987 1.00 0.84 \ ATOM 28 SG CYS L 336 -57.290 23.322 14.764 1.00 0.84 \ ATOM 29 N GLY L 337 -55.749 26.795 13.344 1.00 0.84 \ ATOM 30 CA GLY L 337 -56.492 27.436 12.293 1.00 0.84 \ ATOM 31 C GLY L 337 -57.051 28.787 12.531 1.00 0.84 \ ATOM 32 O GLY L 337 -57.797 29.273 11.672 1.00 0.84 \ ATOM 33 N LEU L 338 -56.731 29.465 13.660 1.00 -0.93 \ ATOM 34 CA LEU L 338 -57.125 30.781 13.959 1.00 -0.93 \ ATOM 35 C LEU L 338 -55.924 31.632 14.005 1.00 -0.93 \ ATOM 36 O LEU L 338 -55.024 31.436 14.864 1.00 -0.93 \ ATOM 37 CB LEU L 338 -57.835 30.794 15.326 1.00 -0.93 \ ATOM 38 CG LEU L 338 -59.126 29.963 15.346 1.00 -0.93 \ ATOM 39 CD1 LEU L 338 -59.616 29.873 16.790 1.00 -0.93 \ ATOM 40 CD2 LEU L 338 -60.192 30.572 14.447 1.00 -0.93 \ ATOM 41 N ARG L 339 -55.820 32.553 13.053 1.00 0.84 \ ATOM 42 CA ARG L 339 -54.578 33.285 12.880 1.00 0.84 \ ATOM 43 C ARG L 339 -54.458 34.440 13.857 1.00 0.84 \ ATOM 44 O ARG L 339 -55.396 35.266 13.925 1.00 0.84 \ ATOM 45 CB ARG L 339 -54.493 33.874 11.501 1.00 0.84 \ ATOM 46 CG ARG L 339 -54.504 32.739 10.452 1.00 0.84 \ ATOM 47 CD ARG L 339 -54.573 33.272 9.035 1.00 0.84 \ ATOM 48 NE ARG L 339 -55.870 33.905 8.830 1.00 0.84 \ ATOM 49 CZ ARG L 339 -56.281 34.493 7.732 1.00 0.84 \ ATOM 50 NH1 ARG L 339 -55.454 34.581 6.725 1.00 0.84 \ ATOM 51 NH2 ARG L 339 -57.482 35.073 7.644 1.00 0.84 \ ATOM 52 N PRO L 340 -53.317 34.576 14.542 1.00 0.84 \ ATOM 53 CA PRO L 340 -53.149 35.695 15.431 1.00 0.84 \ ATOM 54 C PRO L 340 -53.386 37.038 14.833 1.00 0.84 \ ATOM 55 O PRO L 340 -53.933 37.920 15.507 1.00 0.84 \ ATOM 56 CB PRO L 340 -51.674 35.641 15.786 1.00 0.84 \ ATOM 57 CG PRO L 340 -51.406 34.144 15.821 1.00 0.84 \ ATOM 58 CD PRO L 340 -52.217 33.620 14.659 1.00 0.84 \ ATOM 59 N LEU L 341 -53.018 37.272 13.573 1.00 0.84 \ ATOM 60 CA LEU L 341 -53.187 38.575 13.000 1.00 0.84 \ ATOM 61 C LEU L 341 -54.476 38.831 12.230 1.00 0.84 \ ATOM 62 O LEU L 341 -54.651 39.937 11.712 1.00 0.84 \ ATOM 63 CB LEU L 341 -51.988 38.937 12.114 1.00 0.84 \ ATOM 64 CG LEU L 341 -50.671 38.980 12.850 1.00 0.84 \ ATOM 65 CD1 LEU L 341 -49.464 39.288 11.942 1.00 0.84 \ ATOM 66 CD2 LEU L 341 -50.691 40.055 13.924 1.00 0.84 \ ATOM 67 N PHE L 342 -55.378 37.876 12.193 1.00 0.84 \ ATOM 68 CA PHE L 342 -56.600 37.944 11.445 1.00 0.84 \ ATOM 69 C PHE L 342 -57.741 37.513 12.346 1.00 0.84 \ ATOM 70 O PHE L 342 -58.313 38.388 13.014 1.00 0.84 \ ATOM 71 CB PHE L 342 -56.447 37.160 10.143 1.00 0.84 \ ATOM 72 CG PHE L 342 -55.527 37.847 9.226 1.00 0.84 \ ATOM 73 CD1 PHE L 342 -55.958 38.991 8.521 1.00 0.84 \ ATOM 74 CD2 PHE L 342 -54.209 37.481 9.092 1.00 0.84 \ ATOM 75 CE1 PHE L 342 -55.084 39.704 7.749 1.00 0.84 \ ATOM 76 CE2 PHE L 342 -53.350 38.148 8.234 1.00 0.84 \ ATOM 77 CZ PHE L 342 -53.757 39.274 7.559 1.00 0.84 \ ATOM 78 N GLU L 343 -58.086 36.256 12.414 1.00 0.84 \ ATOM 79 CA GLU L 343 -59.256 35.787 13.161 1.00 0.84 \ ATOM 80 C GLU L 343 -59.181 36.290 14.630 1.00 0.84 \ ATOM 81 O GLU L 343 -60.209 36.773 15.199 1.00 0.84 \ ATOM 82 CB GLU L 343 -59.403 34.315 13.164 1.00 0.84 \ ATOM 83 CG GLU L 343 -59.904 33.748 11.866 1.00 0.84 \ ATOM 84 CD GLU L 343 -58.838 33.672 10.747 1.00 0.84 \ ATOM 85 OE1 GLU L 343 -59.244 33.674 9.557 1.00 0.84 \ ATOM 86 OE2 GLU L 343 -57.630 33.707 11.077 1.00 0.84 \ ATOM 87 N LYS L 344 -58.006 36.226 15.237 0.50 -0.93 \ ATOM 88 CA LYS L 344 -57.911 36.645 16.643 0.50 -0.93 \ ATOM 89 C LYS L 344 -58.058 38.157 16.872 0.50 -0.93 \ ATOM 90 O LYS L 344 -58.258 38.609 18.011 0.50 -0.93 \ ATOM 91 CB LYS L 344 -56.603 36.146 17.266 0.50 -0.93 \ ATOM 92 CG LYS L 344 -56.373 34.639 17.244 0.50 -0.93 \ ATOM 93 CD LYS L 344 -57.380 33.788 18.017 0.50 -0.93 \ ATOM 94 CE LYS L 344 -57.531 34.184 19.486 0.50 -0.93 \ ATOM 95 NZ LYS L 344 -58.573 33.309 20.131 0.50 -0.93 \ ATOM 96 N LYS L 345 -57.970 38.949 15.821 1.00 0.84 \ ATOM 97 CA LYS L 345 -58.133 40.387 15.874 1.00 0.84 \ ATOM 98 C LYS L 345 -59.448 40.813 15.188 1.00 0.84 \ ATOM 99 O LYS L 345 -59.643 42.012 14.987 1.00 0.84 \ ATOM 100 CB LYS L 345 -56.946 41.064 15.234 1.00 0.84 \ ATOM 101 CG LYS L 345 -55.708 40.913 16.037 1.00 0.84 \ ATOM 102 CD LYS L 345 -54.595 41.732 15.472 1.00 0.84 \ ATOM 103 CE LYS L 345 -53.421 41.573 16.388 1.00 0.84 \ ATOM 104 NZ LYS L 345 -52.390 42.522 15.934 1.00 0.84 \ ATOM 105 N SER L 346 -60.294 39.886 14.792 1.00 -1.28 \ ATOM 106 CA SER L 346 -61.524 40.181 14.040 1.00 -1.28 \ ATOM 107 C SER L 346 -61.190 40.966 12.816 1.00 -1.28 \ ATOM 108 O SER L 346 -61.954 41.876 12.424 1.00 -1.28 \ ATOM 109 CB SER L 346 -62.564 40.966 14.952 1.00 -1.28 \ ATOM 110 OG SER L 346 -62.902 40.111 16.009 1.00 -1.28 \ ATOM 111 N LEU L 347 -60.061 40.625 12.143 1.00 -1.29 \ ATOM 112 CA LEU L 347 -59.642 41.300 10.956 1.00 -1.29 \ ATOM 113 C LEU L 347 -59.725 40.267 9.806 1.00 -1.29 \ ATOM 114 O LEU L 347 -59.291 39.124 9.991 1.00 -1.29 \ ATOM 115 CB LEU L 347 -58.225 41.819 10.973 1.00 -1.29 \ ATOM 116 CG LEU L 347 -57.968 42.959 11.999 1.00 -1.29 \ ATOM 117 CD1 LEU L 347 -56.505 43.339 12.047 1.00 -1.29 \ ATOM 118 CD2 LEU L 347 -58.835 44.194 11.628 1.00 -1.29 \ ATOM 119 N GLU L 348 -60.292 40.668 8.662 1.00 -1.75 \ ATOM 120 CA GLU L 348 -60.313 39.811 7.445 1.00 -1.75 \ ATOM 121 C GLU L 348 -59.123 40.086 6.582 1.00 -1.75 \ ATOM 122 O GLU L 348 -58.584 41.231 6.444 1.00 -1.75 \ ATOM 123 CB GLU L 348 -61.656 40.130 6.733 1.00 -1.75 \ ATOM 124 CG GLU L 348 -62.196 39.256 5.726 1.00 -1.75 \ ATOM 125 CD GLU L 348 -63.540 39.837 5.201 1.00 -1.75 \ ATOM 126 OE1 GLU L 348 -63.559 40.270 4.030 1.00 -1.75 \ ATOM 127 OE2 GLU L 348 -64.465 39.931 6.021 1.00 -1.75 \ ATOM 128 N ASP L 349 -58.542 39.014 5.968 1.00 0.84 \ ATOM 129 CA ASP L 349 -57.502 39.230 5.006 1.00 0.84 \ ATOM 130 C ASP L 349 -58.133 39.722 3.664 1.00 0.84 \ ATOM 131 O ASP L 349 -59.365 39.634 3.509 1.00 0.84 \ ATOM 132 CB ASP L 349 -56.525 37.999 4.821 1.00 0.84 \ ATOM 133 CG ASP L 349 -57.125 36.823 4.152 1.00 0.84 \ ATOM 134 OD1 ASP L 349 -57.748 36.969 3.039 1.00 0.84 \ ATOM 135 OD2 ASP L 349 -57.033 35.657 4.655 1.00 0.84 \ ATOM 136 N LYS L 350 -57.297 40.069 2.714 1.00 -1.30 \ ATOM 137 CA LYS L 350 -57.839 40.773 1.510 1.00 -1.30 \ ATOM 138 C LYS L 350 -58.638 39.899 0.589 1.00 -1.30 \ ATOM 139 O LYS L 350 -59.443 40.428 -0.194 1.00 -1.30 \ ATOM 140 CB LYS L 350 -56.695 41.366 0.728 1.00 -1.30 \ ATOM 141 CG LYS L 350 -56.044 42.584 1.388 1.00 -1.30 \ ATOM 142 CD LYS L 350 -54.797 42.958 0.570 1.00 -1.30 \ ATOM 143 CE LYS L 350 -53.865 43.941 1.278 1.00 -1.30 \ ATOM 144 NZ LYS L 350 -54.551 45.235 1.520 1.00 -1.30 \ ATOM 145 N THR L 351 -58.486 38.572 0.597 1.00 -0.95 \ ATOM 146 CA THR L 351 -59.268 37.725 -0.305 1.00 -0.95 \ ATOM 147 C THR L 351 -60.071 36.600 0.269 1.00 -0.95 \ ATOM 148 O THR L 351 -60.719 35.782 -0.430 1.00 -0.95 \ ATOM 149 CB THR L 351 -58.304 37.184 -1.399 1.00 -0.95 \ ATOM 150 OG1 THR L 351 -57.419 36.211 -0.827 1.00 -0.95 \ ATOM 151 CG2 THR L 351 -57.463 38.264 -2.084 1.00 -0.95 \ ATOM 152 N GLU L 352 -60.130 36.470 1.605 1.00 0.84 \ ATOM 153 CA GLU L 352 -60.891 35.410 2.168 1.00 0.84 \ ATOM 154 C GLU L 352 -62.381 35.414 1.861 1.00 0.84 \ ATOM 155 O GLU L 352 -63.026 34.350 1.803 1.00 0.84 \ ATOM 156 CB GLU L 352 -60.701 35.267 3.700 1.00 0.84 \ ATOM 157 CG GLU L 352 -61.015 36.520 4.513 1.00 0.84 \ ATOM 158 CD GLU L 352 -60.915 36.205 6.015 1.00 0.84 \ ATOM 159 OE1 GLU L 352 -61.897 35.599 6.536 1.00 0.84 \ ATOM 160 OE2 GLU L 352 -59.844 36.566 6.586 1.00 0.84 \ ATOM 161 N ARG L 353 -62.881 36.613 1.602 1.00 -2.09 \ ATOM 162 CA ARG L 353 -64.315 36.740 1.226 1.00 -2.09 \ ATOM 163 C ARG L 353 -64.640 35.939 -0.047 1.00 -2.09 \ ATOM 164 O ARG L 353 -65.683 35.359 -0.211 1.00 -2.09 \ ATOM 165 CB ARG L 353 -64.607 38.223 1.015 1.00 -2.09 \ ATOM 166 CG ARG L 353 -65.995 38.549 0.416 1.00 -2.09 \ ATOM 167 CD ARG L 353 -67.072 39.082 1.397 1.00 -2.09 \ ATOM 168 NE ARG L 353 -68.410 38.996 0.744 1.00 -2.09 \ ATOM 169 CZ ARG L 353 -69.469 38.274 1.156 1.00 -2.09 \ ATOM 170 NH1 ARG L 353 -69.467 37.581 2.300 1.00 -2.09 \ ATOM 171 NH2 ARG L 353 -70.564 38.251 0.410 1.00 -2.09 \ ATOM 172 N GLU L 354 -63.647 35.880 -0.931 1.00 0.04 \ ATOM 173 CA GLU L 354 -63.823 35.055 -2.136 1.00 0.04 \ ATOM 174 C GLU L 354 -64.093 33.654 -1.839 1.00 0.04 \ ATOM 175 O GLU L 354 -64.876 32.936 -2.537 1.00 0.04 \ ATOM 176 CB GLU L 354 -62.585 35.276 -3.039 1.00 0.04 \ ATOM 177 CG GLU L 354 -62.547 34.370 -4.299 1.00 0.04 \ ATOM 178 CD GLU L 354 -61.255 34.510 -5.139 1.00 0.04 \ ATOM 179 OE1 GLU L 354 -60.249 35.137 -4.656 1.00 0.04 \ ATOM 180 OE2 GLU L 354 -61.303 33.923 -6.259 1.00 0.04 \ ATOM 181 N LEU L 355 -63.379 33.130 -0.811 1.00 0.84 \ ATOM 182 CA LEU L 355 -63.557 31.764 -0.429 1.00 0.84 \ ATOM 183 C LEU L 355 -65.017 31.594 0.091 1.00 0.84 \ ATOM 184 O LEU L 355 -65.715 30.652 -0.209 1.00 0.84 \ ATOM 185 CB LEU L 355 -62.553 31.324 0.666 1.00 0.84 \ ATOM 186 CG LEU L 355 -61.105 31.521 0.196 1.00 0.84 \ ATOM 187 CD1 LEU L 355 -60.249 31.064 1.359 1.00 0.84 \ ATOM 188 CD2 LEU L 355 -60.731 30.771 -1.060 1.00 0.84 \ ATOM 189 N LEU L 356 -65.353 32.435 1.067 1.00 -0.50 \ ATOM 190 CA LEU L 356 -66.749 32.347 1.665 1.00 -0.50 \ ATOM 191 C LEU L 356 -67.870 32.434 0.578 1.00 -0.50 \ ATOM 192 O LEU L 356 -68.812 31.644 0.604 1.00 -0.50 \ ATOM 193 CB LEU L 356 -66.884 33.559 2.665 1.00 -0.50 \ ATOM 194 CG LEU L 356 -68.305 33.771 3.275 1.00 -0.50 \ ATOM 195 CD1 LEU L 356 -68.642 32.499 4.054 1.00 -0.50 \ ATOM 196 CD2 LEU L 356 -68.409 35.097 4.125 1.00 -0.50 \ ATOM 197 N GLU L 357 -67.684 33.334 -0.335 1.00 -0.09 \ ATOM 198 CA GLU L 357 -68.661 33.504 -1.466 1.00 -0.09 \ ATOM 199 C GLU L 357 -68.745 32.295 -2.361 1.00 -0.09 \ ATOM 200 O GLU L 357 -69.811 31.940 -2.892 1.00 -0.09 \ ATOM 201 CB GLU L 357 -68.352 34.665 -2.272 1.00 -0.09 \ ATOM 202 CG GLU L 357 -68.567 35.976 -1.557 1.00 -0.09 \ ATOM 203 CD GLU L 357 -68.067 37.139 -2.378 1.00 -0.09 \ ATOM 204 OE1 GLU L 357 -67.243 36.938 -3.297 1.00 -0.09 \ ATOM 205 OE2 GLU L 357 -68.425 38.296 -2.054 1.00 -0.09 \ ATOM 206 N SER L 358 -67.653 31.499 -2.459 1.00 0.84 \ ATOM 207 CA SER L 358 -67.747 30.322 -3.242 1.00 0.84 \ ATOM 208 C SER L 358 -68.641 29.298 -2.655 1.00 0.84 \ ATOM 209 O SER L 358 -69.087 28.391 -3.352 1.00 0.84 \ ATOM 210 CB SER L 358 -66.304 29.719 -3.484 1.00 0.84 \ ATOM 211 OG SER L 358 -65.890 29.006 -2.341 1.00 0.84 \ ATOM 212 N TYR L 359 -68.903 29.290 -1.353 1.00 0.84 \ ATOM 213 CA TYR L 359 -69.828 28.340 -0.754 1.00 0.84 \ ATOM 214 C TYR L 359 -71.328 28.654 -1.079 1.00 0.84 \ ATOM 215 O TYR L 359 -72.164 27.745 -0.947 1.00 0.84 \ ATOM 216 CB TYR L 359 -69.722 28.362 0.734 1.00 0.84 \ ATOM 217 CG TYR L 359 -68.360 28.014 1.267 1.00 0.84 \ ATOM 218 CD1 TYR L 359 -67.752 26.863 0.861 1.00 0.84 \ ATOM 219 CD2 TYR L 359 -67.747 28.809 2.258 1.00 0.84 \ ATOM 220 CE1 TYR L 359 -66.478 26.516 1.348 1.00 0.84 \ ATOM 221 CE2 TYR L 359 -66.517 28.474 2.761 1.00 0.84 \ ATOM 222 CZ TYR L 359 -65.899 27.340 2.343 1.00 0.84 \ ATOM 223 OH TYR L 359 -64.660 26.900 2.866 1.00 0.84 \ ATOM 224 N ILE L 360 -71.536 29.835 -1.549 1.00 -0.95 \ ATOM 225 CA ILE L 360 -72.894 30.314 -2.017 1.00 -0.95 \ ATOM 226 C ILE L 360 -73.031 30.057 -3.524 1.00 -0.95 \ ATOM 227 O ILE L 360 -73.740 29.151 -3.913 1.00 -0.95 \ ATOM 228 CB ILE L 360 -73.035 31.806 -1.765 1.00 -0.95 \ ATOM 229 CG1 ILE L 360 -72.843 32.072 -0.285 1.00 -0.95 \ ATOM 230 CG2 ILE L 360 -74.424 32.259 -2.245 1.00 -0.95 \ ATOM 231 CD1 ILE L 360 -72.484 33.508 0.046 1.00 -0.95 \ ATOM 232 N ASP L 361 -72.224 30.766 -4.321 1.00 -1.56 \ ATOM 233 CA ASP L 361 -72.346 30.862 -5.787 1.00 -1.56 \ ATOM 234 C ASP L 361 -71.792 29.648 -6.516 1.00 -1.56 \ ATOM 235 O ASP L 361 -70.742 29.140 -6.123 1.00 -1.56 \ ATOM 236 CB ASP L 361 -71.616 32.139 -6.270 1.00 -1.56 \ ATOM 237 CG ASP L 361 -72.316 33.422 -5.809 1.00 -1.56 \ ATOM 238 OD1 ASP L 361 -73.569 33.456 -5.779 1.00 -1.56 \ ATOM 239 OD2 ASP L 361 -71.615 34.403 -5.484 1.00 -1.56 \ """, "e6eo6L1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6eo6L1_csv", state=0, origin=1) cmd.zoom("e6eo6L1_csv", animate=-1)