cmd.read_pdbstr("""\ ATOM 1 N MET y 1 372.784 305.729 292.179 1.00 -1.00 \ ATOM 2 CA MET y 1 371.335 305.640 292.298 1.00 -1.00 \ ATOM 3 C MET y 1 370.646 306.263 291.099 1.00 -1.00 \ ATOM 4 O MET y 1 369.864 307.196 291.254 1.00 -1.00 \ ATOM 5 CB MET y 1 370.854 306.333 293.574 1.00 -1.00 \ ATOM 6 CG MET y 1 371.277 305.661 294.869 1.00 -1.00 \ ATOM 7 SD MET y 1 370.532 304.040 295.102 1.00 -1.00 \ ATOM 8 CE MET y 1 371.389 303.492 296.571 1.00 -1.00 \ ATOM 9 N ILE y 2 370.925 305.755 289.901 1.00 -1.00 \ ATOM 10 CA ILE y 2 370.362 306.343 288.694 1.00 -1.00 \ ATOM 11 C ILE y 2 369.477 305.358 287.932 1.00 -1.00 \ ATOM 12 O ILE y 2 369.236 305.552 286.744 1.00 -1.00 \ ATOM 13 CB ILE y 2 371.463 306.914 287.781 1.00 -1.00 \ ATOM 14 CG1 ILE y 2 372.434 305.820 287.347 1.00 -1.00 \ ATOM 15 CG2 ILE y 2 372.198 308.049 288.475 1.00 -1.00 \ ATOM 16 CD1 ILE y 2 373.299 306.250 286.202 1.00 -1.00 \ ATOM 17 N ASN y 3 368.988 304.316 288.614 1.00 -1.00 \ ATOM 18 CA ASN y 3 367.991 303.362 288.112 1.00 -1.00 \ ATOM 19 C ASN y 3 368.485 302.645 286.851 1.00 -1.00 \ ATOM 20 O ASN y 3 367.972 302.824 285.749 1.00 -1.00 \ ATOM 21 CB ASN y 3 366.648 304.057 287.866 1.00 -1.00 \ ATOM 22 CG ASN y 3 365.503 303.086 287.745 1.00 -1.00 \ ATOM 23 OD1 ASN y 3 365.677 301.881 287.884 1.00 -1.00 \ ATOM 24 ND2 ASN y 3 364.316 303.610 287.483 1.00 -1.00 \ ATOM 25 N TRP y 4 369.525 301.833 287.061 1.00 -1.00 \ ATOM 26 CA TRP y 4 370.201 301.158 285.957 1.00 -1.00 \ ATOM 27 C TRP y 4 369.316 300.113 285.289 1.00 -1.00 \ ATOM 28 O TRP y 4 369.562 299.732 284.140 1.00 -1.00 \ ATOM 29 CB TRP y 4 371.470 300.482 286.455 1.00 -1.00 \ ATOM 30 CG TRP y 4 372.561 301.380 286.901 1.00 -1.00 \ ATOM 31 CD1 TRP y 4 372.860 301.733 288.183 1.00 -1.00 \ ATOM 32 CD2 TRP y 4 373.541 302.004 286.073 1.00 -1.00 \ ATOM 33 NE1 TRP y 4 373.960 302.552 288.203 1.00 -1.00 \ ATOM 34 CE2 TRP y 4 374.398 302.734 286.918 1.00 -1.00 \ ATOM 35 CE3 TRP y 4 373.773 302.024 284.696 1.00 -1.00 \ ATOM 36 CZ2 TRP y 4 375.475 303.469 286.432 1.00 -1.00 \ ATOM 37 CZ3 TRP y 4 374.838 302.760 284.215 1.00 -1.00 \ ATOM 38 CH2 TRP y 4 375.672 303.476 285.079 1.00 -1.00 \ ATOM 39 N GLN y 5 368.309 299.607 286.004 1.00 -0.53 \ ATOM 40 CA GLN y 5 367.467 298.549 285.456 1.00 -0.53 \ ATOM 41 C GLN y 5 366.585 299.073 284.336 1.00 -0.53 \ ATOM 42 O GLN y 5 366.535 298.492 283.248 1.00 -0.53 \ ATOM 43 CB GLN y 5 366.611 297.937 286.560 1.00 -0.53 \ ATOM 44 CG GLN y 5 367.411 297.254 287.639 1.00 -0.53 \ ATOM 45 CD GLN y 5 368.116 296.023 287.134 1.00 -0.53 \ ATOM 46 OE1 GLN y 5 367.561 295.259 286.347 1.00 -0.53 \ ATOM 47 NE2 GLN y 5 369.351 295.822 287.579 1.00 -0.53 \ ATOM 48 N VAL y 6 365.893 300.185 284.588 1.00 -0.50 \ ATOM 49 CA VAL y 6 364.989 300.765 283.600 1.00 -0.50 \ ATOM 50 C VAL y 6 365.769 301.280 282.399 1.00 -0.50 \ ATOM 51 O VAL y 6 365.337 301.130 281.250 1.00 -0.50 \ ATOM 52 CB VAL y 6 364.143 301.867 284.260 1.00 -0.50 \ ATOM 53 CG1 VAL y 6 363.299 302.594 283.254 1.00 -0.50 \ ATOM 54 CG2 VAL y 6 363.252 301.262 285.298 1.00 -0.50 \ ATOM 55 N ILE y 7 366.953 301.847 282.643 1.00 0.99 \ ATOM 56 CA ILE y 7 367.833 302.263 281.554 1.00 0.99 \ ATOM 57 C ILE y 7 368.279 301.054 280.745 1.00 0.99 \ ATOM 58 O ILE y 7 368.385 301.114 279.515 1.00 0.99 \ ATOM 59 CB ILE y 7 369.031 303.049 282.118 1.00 0.99 \ ATOM 60 CG1 ILE y 7 368.555 304.331 282.792 1.00 0.99 \ ATOM 61 CG2 ILE y 7 370.026 303.414 281.038 1.00 0.99 \ ATOM 62 CD1 ILE y 7 369.659 305.086 283.484 1.00 0.99 \ ATOM 63 N GLY y 8 368.483 299.921 281.414 1.00 -0.53 \ ATOM 64 CA GLY y 8 368.857 298.714 280.699 1.00 -0.53 \ ATOM 65 C GLY y 8 367.714 298.123 279.898 1.00 -0.53 \ ATOM 66 O GLY y 8 367.916 297.629 278.789 1.00 -0.53 \ ATOM 67 N GLN y 9 366.498 298.176 280.442 1.00 0.99 \ ATOM 68 CA GLN y 9 365.360 297.557 279.770 1.00 0.99 \ ATOM 69 C GLN y 9 364.905 298.376 278.572 1.00 0.99 \ ATOM 70 O GLN y 9 364.563 297.816 277.526 1.00 0.99 \ ATOM 71 CB GLN y 9 364.204 297.380 280.746 1.00 0.99 \ ATOM 72 CG GLN y 9 364.450 296.379 281.839 1.00 0.99 \ ATOM 73 CD GLN y 9 363.313 296.339 282.823 1.00 0.99 \ ATOM 74 OE1 GLN y 9 362.363 297.106 282.711 1.00 0.99 \ ATOM 75 NE2 GLN y 9 363.402 295.450 283.800 1.00 0.99 \ ATOM 76 N LEU y 10 364.887 299.702 278.706 1.00 0.99 \ ATOM 77 CA LEU y 10 364.369 300.547 277.636 1.00 0.99 \ ATOM 78 C LEU y 10 365.327 300.596 276.456 1.00 0.99 \ ATOM 79 O LEU y 10 364.906 300.779 275.310 1.00 0.99 \ ATOM 80 CB LEU y 10 364.093 301.953 278.159 1.00 0.99 \ ATOM 81 CG LEU y 10 362.941 302.061 279.147 1.00 0.99 \ ATOM 82 CD1 LEU y 10 362.834 303.483 279.651 1.00 0.99 \ ATOM 83 CD2 LEU y 10 361.652 301.616 278.494 1.00 0.99 \ ATOM 84 N MET y 11 366.622 300.445 276.712 1.00 -0.53 \ ATOM 85 CA MET y 11 367.555 300.354 275.599 1.00 -0.53 \ ATOM 86 C MET y 11 367.470 298.990 274.939 1.00 -0.53 \ ATOM 87 O MET y 11 367.519 298.884 273.711 1.00 -0.53 \ ATOM 88 CB MET y 11 368.979 300.638 276.063 1.00 -0.53 \ ATOM 89 CG MET y 11 369.201 302.072 276.486 1.00 -0.53 \ ATOM 90 SD MET y 11 368.783 303.235 275.172 1.00 -0.53 \ ATOM 91 CE MET y 11 370.061 302.875 273.970 1.00 -0.53 \ ATOM 92 N SER y 12 367.312 297.937 275.735 1.00 -0.53 \ ATOM 93 CA SER y 12 367.320 296.596 275.176 1.00 -0.53 \ ATOM 94 C SER y 12 366.032 296.245 274.446 1.00 -0.53 \ ATOM 95 O SER y 12 366.057 295.361 273.590 1.00 -0.53 \ ATOM 96 CB SER y 12 367.603 295.584 276.274 1.00 -0.53 \ ATOM 97 OG SER y 12 366.648 295.717 277.301 1.00 -0.53 \ ATOM 98 N THR y 13 364.910 296.898 274.745 1.00 -1.45 \ ATOM 99 CA THR y 13 363.770 296.766 273.843 1.00 -1.45 \ ATOM 100 C THR y 13 364.020 297.527 272.554 1.00 -1.45 \ ATOM 101 O THR y 13 363.768 297.010 271.464 1.00 -1.45 \ ATOM 102 CB THR y 13 362.489 297.272 274.489 1.00 -1.45 \ ATOM 103 OG1 THR y 13 362.656 298.644 274.856 1.00 -1.45 \ ATOM 104 CG2 THR y 13 362.139 296.457 275.702 1.00 -1.45 \ ATOM 105 N ALA y 14 364.535 298.751 272.665 1.00 0.99 \ ATOM 106 CA ALA y 14 364.775 299.586 271.498 1.00 0.99 \ ATOM 107 C ALA y 14 365.884 299.048 270.610 1.00 0.99 \ ATOM 108 O ALA y 14 365.928 299.394 269.429 1.00 0.99 \ ATOM 109 CB ALA y 14 365.110 301.008 271.933 1.00 0.99 \ ATOM 110 N VAL y 15 366.787 298.227 271.140 1.00 -1.45 \ ATOM 111 CA VAL y 15 367.719 297.521 270.269 1.00 -1.45 \ ATOM 112 C VAL y 15 366.986 296.436 269.495 1.00 -1.45 \ ATOM 113 O VAL y 15 367.134 296.308 268.275 1.00 -1.45 \ ATOM 114 CB VAL y 15 368.894 296.951 271.083 1.00 -1.45 \ ATOM 115 CG1 VAL y 15 369.705 295.987 270.249 1.00 -1.45 \ ATOM 116 CG2 VAL y 15 369.797 298.073 271.538 1.00 -1.45 \ ATOM 117 N ILE y 16 366.142 295.679 270.188 1.00 0.99 \ ATOM 118 CA ILE y 16 365.469 294.533 269.592 1.00 0.99 \ ATOM 119 C ILE y 16 364.304 294.967 268.705 1.00 0.99 \ ATOM 120 O ILE y 16 364.127 294.441 267.602 1.00 0.99 \ ATOM 121 CB ILE y 16 365.039 293.577 270.718 1.00 0.99 \ ATOM 122 CG1 ILE y 16 366.283 292.961 271.367 1.00 0.99 \ ATOM 123 CG2 ILE y 16 364.086 292.515 270.221 1.00 0.99 \ ATOM 124 CD1 ILE y 16 366.012 292.206 272.650 1.00 0.99 \ ATOM 125 N MET y 17 363.517 295.957 269.139 1.00 -1.45 \ ATOM 126 CA MET y 17 362.421 296.457 268.311 1.00 -1.45 \ ATOM 127 C MET y 17 362.905 297.184 267.068 1.00 -1.45 \ ATOM 128 O MET y 17 362.122 297.361 266.133 1.00 -1.45 \ ATOM 129 CB MET y 17 361.522 297.408 269.098 1.00 -1.45 \ ATOM 130 CG MET y 17 360.733 296.753 270.200 1.00 -1.45 \ ATOM 131 SD MET y 17 359.769 297.922 271.178 1.00 -1.45 \ ATOM 132 CE MET y 17 358.495 298.380 270.013 1.00 -1.45 \ ATOM 133 N LEU y 18 364.156 297.630 267.038 1.00 -0.53 \ ATOM 134 CA LEU y 18 364.727 298.197 265.830 1.00 -0.53 \ ATOM 135 C LEU y 18 365.606 297.216 265.078 1.00 -0.53 \ ATOM 136 O LEU y 18 366.095 297.556 264.001 1.00 -0.53 \ ATOM 137 CB LEU y 18 365.538 299.454 266.151 1.00 -0.53 \ ATOM 138 CG LEU y 18 364.726 300.654 266.634 1.00 -0.53 \ ATOM 139 CD1 LEU y 18 365.651 301.788 267.031 1.00 -0.53 \ ATOM 140 CD2 LEU y 18 363.749 301.104 265.569 1.00 -0.53 \ ATOM 141 N ALA y 19 365.832 296.022 265.621 1.00 0.99 \ ATOM 142 CA ALA y 19 366.570 294.998 264.896 1.00 0.99 \ ATOM 143 C ALA y 19 365.672 294.140 264.027 1.00 0.99 \ ATOM 144 O ALA y 19 366.175 293.283 263.298 1.00 0.99 \ ATOM 145 CB ALA y 19 367.339 294.097 265.863 1.00 0.99 \ ATOM 146 N GLY y 20 364.365 294.327 264.109 1.00 0.99 \ ATOM 147 CA GLY y 20 363.431 293.577 263.308 1.00 0.99 \ ATOM 148 C GLY y 20 363.123 294.208 261.970 1.00 0.99 \ ATOM 149 O GLY y 20 363.301 293.585 260.924 1.00 0.99 \ ATOM 150 N PRO y 21 362.629 295.450 261.972 1.00 0.99 \ ATOM 151 CA PRO y 21 362.501 296.178 260.705 1.00 0.99 \ ATOM 152 C PRO y 21 363.820 296.471 260.009 1.00 0.99 \ ATOM 153 O PRO y 21 363.804 296.717 258.800 1.00 0.99 \ ATOM 154 CB PRO y 21 361.793 297.469 261.120 1.00 0.99 \ ATOM 155 CG PRO y 21 361.012 297.080 262.297 1.00 0.99 \ ATOM 156 CD PRO y 21 361.844 296.098 263.034 1.00 0.99 \ ATOM 157 N ALA y 22 364.958 296.434 260.706 1.00 -1.45 \ ATOM 158 CA ALA y 22 366.235 296.634 260.030 1.00 -1.45 \ ATOM 159 C ALA y 22 366.590 295.446 259.149 1.00 -1.45 \ ATOM 160 O ALA y 22 367.400 295.573 258.228 1.00 -1.45 \ ATOM 161 CB ALA y 22 367.344 296.887 261.045 1.00 -1.45 \ ATOM 162 N VAL y 23 366.010 294.279 259.427 1.00 -0.50 \ ATOM 163 CA VAL y 23 366.158 293.137 258.530 1.00 -0.50 \ ATOM 164 C VAL y 23 365.406 293.389 257.232 1.00 -0.50 \ ATOM 165 O VAL y 23 365.864 293.024 256.143 1.00 -0.50 \ ATOM 166 CB VAL y 23 365.674 291.860 259.238 1.00 -0.50 \ ATOM 167 CG1 VAL y 23 365.749 290.652 258.331 1.00 -0.50 \ ATOM 168 CG2 VAL y 23 366.489 291.632 260.473 1.00 -0.50 \ ATOM 169 N ILE y 24 364.257 294.054 257.322 1.00 0.99 \ ATOM 170 CA ILE y 24 363.462 294.328 256.134 1.00 0.99 \ ATOM 171 C ILE y 24 363.990 295.551 255.397 1.00 0.99 \ ATOM 172 O ILE y 24 364.078 295.553 254.162 1.00 0.99 \ ATOM 173 CB ILE y 24 361.988 294.476 256.538 1.00 0.99 \ ATOM 174 CG1 ILE y 24 361.482 293.133 257.049 1.00 0.99 \ ATOM 175 CG2 ILE y 24 361.145 294.967 255.389 1.00 0.99 \ ATOM 176 CD1 ILE y 24 360.139 293.193 257.665 1.00 0.99 \ ATOM 177 N VAL y 25 364.382 296.592 256.141 1.00 -0.53 \ ATOM 178 CA VAL y 25 364.869 297.831 255.534 1.00 -0.53 \ ATOM 179 C VAL y 25 366.167 297.586 254.776 1.00 -0.53 \ ATOM 180 O VAL y 25 366.344 298.069 253.652 1.00 -0.53 \ ATOM 181 CB VAL y 25 365.023 298.925 256.606 1.00 -0.53 \ ATOM 182 CG1 VAL y 25 365.832 300.099 256.094 1.00 -0.53 \ ATOM 183 CG2 VAL y 25 363.656 299.423 257.019 1.00 -0.53 \ ATOM 184 N LEU y 26 367.060 296.766 255.338 1.00 0.99 \ ATOM 185 CA LEU y 26 368.263 296.390 254.604 1.00 0.99 \ ATOM 186 C LEU y 26 367.966 295.535 253.387 1.00 0.99 \ ATOM 187 O LEU y 26 368.784 295.494 252.467 1.00 0.99 \ ATOM 188 CB LEU y 26 369.251 295.653 255.499 1.00 0.99 \ ATOM 189 CG LEU y 26 370.040 296.530 256.461 1.00 0.99 \ ATOM 190 CD1 LEU y 26 370.899 295.680 257.359 1.00 0.99 \ ATOM 191 CD2 LEU y 26 370.888 297.501 255.675 1.00 0.99 \ ATOM 192 N LEU y 27 366.820 294.866 253.344 1.00 0.99 \ ATOM 193 CA LEU y 27 366.451 294.146 252.135 1.00 0.99 \ ATOM 194 C LEU y 27 365.783 295.035 251.103 1.00 0.99 \ ATOM 195 O LEU y 27 365.929 294.794 249.901 1.00 0.99 \ ATOM 196 CB LEU y 27 365.537 292.972 252.470 1.00 0.99 \ ATOM 197 CG LEU y 27 366.282 291.771 253.025 1.00 0.99 \ ATOM 198 CD1 LEU y 27 365.308 290.738 253.533 1.00 0.99 \ ATOM 199 CD2 LEU y 27 367.143 291.209 251.918 1.00 0.99 \ ATOM 200 N ALA y 28 365.055 296.061 251.540 1.00 0.99 \ ATOM 201 CA ALA y 28 364.394 296.937 250.581 1.00 0.99 \ ATOM 202 C ALA y 28 365.405 297.812 249.855 1.00 0.99 \ ATOM 203 O ALA y 28 365.225 298.138 248.677 1.00 0.99 \ ATOM 204 CB ALA y 28 363.347 297.790 251.289 1.00 0.99 \ ATOM 205 N LEU y 29 366.486 298.184 250.537 1.00 -1.45 \ ATOM 206 CA LEU y 29 367.544 298.948 249.891 1.00 -1.45 \ ATOM 207 C LEU y 29 368.333 298.069 248.939 1.00 -1.45 \ ATOM 208 O LEU y 29 368.846 298.539 247.918 1.00 -1.45 \ ATOM 209 CB LEU y 29 368.463 299.543 250.950 1.00 -1.45 \ ATOM 210 CG LEU y 29 367.751 300.487 251.907 1.00 -1.45 \ ATOM 211 CD1 LEU y 29 368.692 300.921 253.003 1.00 -1.45 \ ATOM 212 CD2 LEU y 29 367.180 301.677 251.164 1.00 -1.45 \ ATOM 213 N LYS y 30 368.432 296.785 249.257 1.00 -0.53 \ ATOM 214 CA LYS y 30 369.201 295.843 248.466 1.00 -0.53 \ ATOM 215 C LYS y 30 368.390 295.285 247.303 1.00 -0.53 \ ATOM 216 O LYS y 30 368.972 294.673 246.400 1.00 -0.53 \ ATOM 217 CB LYS y 30 369.698 294.743 249.407 1.00 -0.53 \ ATOM 218 CG LYS y 30 370.811 293.871 248.893 1.00 -0.53 \ ATOM 219 CD LYS y 30 371.250 292.887 249.949 1.00 -0.53 \ ATOM 220 CE LYS y 30 372.479 293.379 250.690 1.00 -0.53 \ ATOM 221 NZ LYS y 30 372.156 294.442 251.683 1.00 -0.53 \ ATOM 222 N LYS y 31 367.071 295.523 247.303 1.00 -1.45 \ ATOM 223 CA LYS y 31 366.122 295.032 246.293 1.00 -1.45 \ ATOM 224 C LYS y 31 366.162 293.511 246.169 1.00 -1.45 \ ATOM 225 O LYS y 31 366.011 292.954 245.082 1.00 -1.45 \ ATOM 226 CB LYS y 31 366.336 295.693 244.925 1.00 -1.45 \ ATOM 227 CG LYS y 31 365.806 297.119 244.807 1.00 -1.45 \ ATOM 228 CD LYS y 31 366.862 298.150 245.189 1.00 -1.45 \ ATOM 229 CE LYS y 31 366.418 299.566 244.839 1.00 -1.45 \ ATOM 230 NZ LYS y 31 365.238 300.010 245.633 1.00 -1.45 \ ATOM 231 N GLY y 32 366.358 292.833 247.297 1.00 0.99 \ ATOM 232 CA GLY y 32 366.377 291.390 247.303 1.00 0.99 \ ATOM 233 C GLY y 32 364.989 290.796 247.255 1.00 0.99 \ ATOM 234 O GLY y 32 363.982 291.493 247.151 1.00 0.99 \ ATOM 235 N ASN y 33 364.941 289.469 247.345 1.00 -0.50 \ ATOM 236 CA ASN y 33 363.675 288.757 247.239 1.00 -0.50 \ ATOM 237 C ASN y 33 362.861 288.900 248.512 1.00 -0.50 \ ATOM 238 O ASN y 33 362.893 288.021 249.377 1.00 -0.50 \ ATOM 239 CB ASN y 33 363.898 287.276 246.946 1.00 -0.50 \ ATOM 240 CG ASN y 33 364.503 287.039 245.589 1.00 -0.50 \ ATOM 241 OD1 ASN y 33 364.147 287.698 244.615 1.00 -0.50 \ ATOM 242 ND2 ASN y 33 365.420 286.085 245.512 1.00 -0.50 \ ATOM 243 N LEU y 34 362.129 289.995 248.635 1.00 0.99 \ ATOM 244 CA LEU y 34 361.133 290.118 249.686 1.00 0.99 \ ATOM 245 C LEU y 34 359.887 289.309 249.342 1.00 0.99 \ ATOM 246 O LEU y 34 359.942 288.092 249.180 1.00 0.99 \ ATOM 247 CB LEU y 34 360.764 291.581 249.906 1.00 0.99 \ ATOM 248 CG LEU y 34 361.831 292.439 250.564 1.00 0.99 \ ATOM 249 CD1 LEU y 34 361.427 293.886 250.514 1.00 0.99 \ ATOM 250 CD2 LEU y 34 361.959 291.992 251.986 1.00 0.99 \ """, "e6j3yy1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6j3yy1_csv", state=0, origin=1) cmd.zoom("e6j3yy1_csv", animate=-1)