cmd.read_pdbstr("""\ ATOM 1 N LYS A 487 6.762 29.447 0.626 1.00 -1.00 \ ATOM 2 CA LYS A 487 7.479 29.208 -0.628 1.00 -1.00 \ ATOM 3 C LYS A 487 8.463 30.346 -0.870 1.00 -1.00 \ ATOM 4 O LYS A 487 8.184 31.280 -1.636 1.00 -1.00 \ ATOM 5 CB LYS A 487 6.516 29.059 -1.809 1.00 -1.00 \ ATOM 6 CG LYS A 487 5.446 27.978 -1.591 1.00 -1.00 \ ATOM 7 CD LYS A 487 4.743 27.562 -2.880 1.00 -1.00 \ ATOM 8 CE LYS A 487 3.323 28.118 -2.961 1.00 -1.00 \ ATOM 9 NZ LYS A 487 2.441 27.309 -3.861 1.00 -1.00 \ ATOM 10 N PRO A 488 9.646 30.287 -0.254 1.00 1.39 \ ATOM 11 CA PRO A 488 10.601 31.401 -0.324 1.00 1.39 \ ATOM 12 C PRO A 488 11.507 31.422 -1.547 1.00 1.39 \ ATOM 13 O PRO A 488 12.313 32.350 -1.670 1.00 1.39 \ ATOM 14 CB PRO A 488 11.432 31.190 0.949 1.00 1.39 \ ATOM 15 CG PRO A 488 11.433 29.717 1.141 1.00 1.39 \ ATOM 16 CD PRO A 488 10.078 29.236 0.681 1.00 1.39 \ ATOM 17 N PHE A 489 11.417 30.441 -2.439 1.00 -0.66 \ ATOM 18 CA PHE A 489 12.248 30.383 -3.636 1.00 -0.66 \ ATOM 19 C PHE A 489 11.377 30.651 -4.858 1.00 -0.66 \ ATOM 20 O PHE A 489 10.489 29.853 -5.174 1.00 -0.66 \ ATOM 21 CB PHE A 489 12.935 29.024 -3.741 1.00 -0.66 \ ATOM 22 CG PHE A 489 13.555 28.568 -2.453 1.00 -0.66 \ ATOM 23 CD1 PHE A 489 12.998 27.531 -1.726 1.00 -0.66 \ ATOM 24 CD2 PHE A 489 14.688 29.190 -1.960 1.00 -0.66 \ ATOM 25 CE1 PHE A 489 13.564 27.113 -0.537 1.00 -0.66 \ ATOM 26 CE2 PHE A 489 15.261 28.777 -0.770 1.00 -0.66 \ ATOM 27 CZ PHE A 489 14.696 27.736 -0.058 1.00 -0.66 \ ATOM 28 N SER A 490 11.630 31.768 -5.542 1.00 -1.49 \ ATOM 29 CA SER A 490 10.839 32.180 -6.695 1.00 -1.49 \ ATOM 30 C SER A 490 11.707 32.227 -7.943 1.00 -1.49 \ ATOM 31 O SER A 490 12.853 32.686 -7.901 1.00 -1.49 \ ATOM 32 CB SER A 490 10.207 33.544 -6.464 1.00 -1.49 \ ATOM 33 OG SER A 490 11.211 34.514 -6.254 1.00 -1.49 \ ATOM 34 N CYS A 491 11.149 31.764 -9.053 1.00 1.39 \ ATOM 35 CA CYS A 491 11.912 31.662 -10.291 1.00 1.39 \ ATOM 36 C CYS A 491 12.224 33.054 -10.829 1.00 1.39 \ ATOM 37 O CYS A 491 11.323 33.895 -10.913 1.00 1.39 \ ATOM 38 CB CYS A 491 11.131 30.851 -11.325 1.00 1.39 \ ATOM 39 SG CYS A 491 12.035 30.469 -12.861 1.00 1.39 \ ATOM 40 N PRO A 492 13.478 33.339 -11.197 1.00 -1.53 \ ATOM 41 CA PRO A 492 13.816 34.686 -11.675 1.00 -1.53 \ ATOM 42 C PRO A 492 13.381 34.951 -13.104 1.00 -1.53 \ ATOM 43 O PRO A 492 13.404 36.112 -13.537 1.00 -1.53 \ ATOM 44 CB PRO A 492 15.349 34.725 -11.556 1.00 -1.53 \ ATOM 45 CG PRO A 492 15.745 33.436 -10.875 1.00 -1.53 \ ATOM 46 CD PRO A 492 14.661 32.470 -11.158 1.00 -1.53 \ ATOM 47 N GLU A 493 12.981 33.921 -13.845 1.00 -0.56 \ ATOM 48 CA GLU A 493 12.519 34.104 -15.214 1.00 -0.56 \ ATOM 49 C GLU A 493 11.005 34.277 -15.292 1.00 -0.56 \ ATOM 50 O GLU A 493 10.515 35.168 -15.996 1.00 -0.56 \ ATOM 51 CB GLU A 493 12.958 32.921 -16.082 1.00 -0.56 \ ATOM 52 CG GLU A 493 14.433 32.913 -16.451 1.00 -0.56 \ ATOM 53 CD GLU A 493 14.851 34.138 -17.249 1.00 -0.56 \ ATOM 54 OE1 GLU A 493 15.280 35.138 -16.633 1.00 -0.56 \ ATOM 55 OE2 GLU A 493 14.746 34.103 -18.496 1.00 -0.56 \ ATOM 56 N CYS A 494 10.249 33.438 -14.577 1.00 1.39 \ ATOM 57 CA CYS A 494 8.797 33.432 -14.684 1.00 1.39 \ ATOM 58 C CYS A 494 8.071 33.821 -13.405 1.00 1.39 \ ATOM 59 O CYS A 494 6.879 34.131 -13.472 1.00 1.39 \ ATOM 60 CB CYS A 494 8.296 32.048 -15.128 1.00 1.39 \ ATOM 61 SG CYS A 494 8.339 30.771 -13.851 1.00 1.39 \ ATOM 62 N GLY A 495 8.735 33.802 -12.251 1.00 0.48 \ ATOM 63 CA GLY A 495 8.112 34.215 -11.008 1.00 0.48 \ ATOM 64 C GLY A 495 7.353 33.144 -10.259 1.00 0.48 \ ATOM 65 O GLY A 495 6.625 33.470 -9.315 1.00 0.48 \ ATOM 66 N LEU A 496 7.499 31.878 -10.637 1.00 0.53 \ ATOM 67 CA LEU A 496 6.815 30.806 -9.926 1.00 0.53 \ ATOM 68 C LEU A 496 7.489 30.528 -8.585 1.00 0.53 \ ATOM 69 O LEU A 496 8.718 30.463 -8.491 1.00 0.53 \ ATOM 70 CB LEU A 496 6.797 29.541 -10.782 1.00 0.53 \ ATOM 71 CG LEU A 496 6.061 28.328 -10.220 1.00 0.53 \ ATOM 72 CD1 LEU A 496 4.570 28.620 -10.049 1.00 0.53 \ ATOM 73 CD2 LEU A 496 6.287 27.124 -11.123 1.00 0.53 \ ATOM 74 N GLN A 497 6.675 30.347 -7.544 1.00 -1.50 \ ATOM 75 CA GLN A 497 7.173 30.184 -6.183 1.00 -1.50 \ ATOM 76 C GLN A 497 7.360 28.712 -5.834 1.00 -1.50 \ ATOM 77 O GLN A 497 6.558 27.861 -6.219 1.00 -1.50 \ ATOM 78 CB GLN A 497 6.212 30.819 -5.178 1.00 -1.50 \ ATOM 79 CG GLN A 497 5.878 32.265 -5.452 1.00 -1.50 \ ATOM 80 CD GLN A 497 4.681 32.727 -4.651 1.00 -1.50 \ ATOM 81 OE1 GLN A 497 4.762 33.696 -3.898 1.00 -1.50 \ ATOM 82 NE2 GLN A 497 3.558 32.028 -4.807 1.00 -1.50 \ ATOM 83 N PHE A 498 8.414 28.418 -5.077 1.00 1.39 \ ATOM 84 CA PHE A 498 8.719 27.051 -4.688 1.00 1.39 \ ATOM 85 C PHE A 498 8.996 26.976 -3.195 1.00 1.39 \ ATOM 86 O PHE A 498 9.564 27.894 -2.602 1.00 1.39 \ ATOM 87 CB PHE A 498 9.923 26.503 -5.459 1.00 1.39 \ ATOM 88 CG PHE A 498 9.633 26.205 -6.894 1.00 1.39 \ ATOM 89 CD1 PHE A 498 9.710 27.199 -7.848 1.00 1.39 \ ATOM 90 CD2 PHE A 498 9.285 24.925 -7.291 1.00 1.39 \ ATOM 91 CE1 PHE A 498 9.441 26.923 -9.173 1.00 1.39 \ ATOM 92 CE2 PHE A 498 9.023 24.643 -8.609 1.00 1.39 \ ATOM 93 CZ PHE A 498 9.100 25.642 -9.553 1.00 1.39 \ ATOM 94 N ALA A 499 8.584 25.860 -2.595 1.00 -0.57 \ ATOM 95 CA ALA A 499 8.874 25.612 -1.193 1.00 -0.57 \ ATOM 96 C ALA A 499 10.270 25.045 -0.999 1.00 -0.57 \ ATOM 97 O ALA A 499 10.888 25.274 0.044 1.00 -0.57 \ ATOM 98 CB ALA A 499 7.844 24.653 -0.602 1.00 -0.57 \ ATOM 99 N ARG A 500 10.778 24.313 -1.986 1.00 -1.52 \ ATOM 100 CA ARG A 500 12.081 23.675 -1.906 1.00 -1.52 \ ATOM 101 C ARG A 500 12.983 24.200 -3.012 1.00 -1.52 \ ATOM 102 O ARG A 500 12.537 24.406 -4.146 1.00 -1.52 \ ATOM 103 CB ARG A 500 11.951 22.149 -1.991 1.00 -1.52 \ ATOM 104 CG ARG A 500 11.528 21.534 -0.667 1.00 -1.52 \ ATOM 105 CD ARG A 500 11.389 20.029 -0.736 1.00 -1.52 \ ATOM 106 NE ARG A 500 12.445 19.404 -1.524 1.00 -1.52 \ ATOM 107 CZ ARG A 500 12.526 18.094 -1.734 1.00 -1.52 \ ATOM 108 NH1 ARG A 500 11.615 17.288 -1.201 1.00 -1.52 \ ATOM 109 NH2 ARG A 500 13.499 17.590 -2.479 1.00 -1.52 \ ATOM 110 N LEU A 501 14.254 24.425 -2.665 1.00 -0.61 \ ATOM 111 CA LEU A 501 15.217 24.950 -3.625 1.00 -0.61 \ ATOM 112 C LEU A 501 15.551 23.933 -4.705 1.00 -0.61 \ ATOM 113 O LEU A 501 15.820 24.315 -5.849 1.00 -0.61 \ ATOM 114 CB LEU A 501 16.491 25.379 -2.902 1.00 -0.61 \ ATOM 115 CG LEU A 501 17.617 25.965 -3.753 1.00 -0.61 \ ATOM 116 CD1 LEU A 501 17.248 27.357 -4.224 1.00 -0.61 \ ATOM 117 CD2 LEU A 501 18.927 25.987 -2.972 1.00 -0.61 \ ATOM 118 N ASP A 502 15.542 22.642 -4.365 1.00 -0.06 \ ATOM 119 CA ASP A 502 15.786 21.612 -5.369 1.00 -0.06 \ ATOM 120 C ASP A 502 14.796 21.723 -6.519 1.00 -0.06 \ ATOM 121 O ASP A 502 15.169 21.571 -7.686 1.00 -0.06 \ ATOM 122 CB ASP A 502 15.696 20.223 -4.739 1.00 -0.06 \ ATOM 123 CG ASP A 502 16.160 20.207 -3.303 1.00 -0.06 \ ATOM 124 OD1 ASP A 502 17.039 21.023 -2.951 1.00 -0.06 \ ATOM 125 OD2 ASP A 502 15.637 19.382 -2.525 1.00 -0.06 \ ATOM 126 N ASN A 503 13.528 21.996 -6.210 1.00 -0.04 \ ATOM 127 CA ASN A 503 12.514 22.026 -7.257 1.00 -0.04 \ ATOM 128 C ASN A 503 12.627 23.278 -8.117 1.00 -0.04 \ ATOM 129 O ASN A 503 12.239 23.256 -9.290 1.00 -0.04 \ ATOM 130 CB ASN A 503 11.115 21.913 -6.644 1.00 -0.04 \ ATOM 131 CG ASN A 503 10.854 20.551 -6.019 1.00 -0.04 \ ATOM 132 OD1 ASN A 503 11.423 19.541 -6.438 1.00 -0.04 \ ATOM 133 ND2 ASN A 503 9.984 20.519 -5.010 1.00 -0.04 \ ATOM 134 N LEU A 504 13.136 24.382 -7.562 1.00 0.55 \ ATOM 135 CA LEU A 504 13.398 25.546 -8.401 1.00 0.55 \ ATOM 136 C LEU A 504 14.561 25.277 -9.340 1.00 0.55 \ ATOM 137 O LEU A 504 14.534 25.687 -10.506 1.00 0.55 \ ATOM 138 CB LEU A 504 13.672 26.779 -7.546 1.00 0.55 \ ATOM 139 CG LEU A 504 14.171 28.014 -8.297 1.00 0.55 \ ATOM 140 CD1 LEU A 504 13.179 28.425 -9.354 1.00 0.55 \ ATOM 141 CD2 LEU A 504 14.432 29.170 -7.338 1.00 0.55 \ ATOM 142 N LYS A 505 15.581 24.574 -8.850 1.00 -0.05 \ ATOM 143 CA LYS A 505 16.709 24.196 -9.692 1.00 -0.05 \ ATOM 144 C LYS A 505 16.235 23.452 -10.936 1.00 -0.05 \ ATOM 145 O LYS A 505 16.633 23.776 -12.060 1.00 -0.05 \ ATOM 146 CB LYS A 505 17.686 23.342 -8.881 1.00 -0.05 \ ATOM 147 CG LYS A 505 19.129 23.396 -9.345 1.00 -0.05 \ ATOM 148 CD LYS A 505 20.060 22.918 -8.235 1.00 -0.05 \ ATOM 149 CE LYS A 505 21.530 23.010 -8.639 1.00 -0.05 \ ATOM 150 NZ LYS A 505 21.922 21.977 -9.644 1.00 -0.05 \ ATOM 151 N ALA A 506 15.362 22.461 -10.754 1.00 -1.00 \ ATOM 152 CA ALA A 506 14.908 21.665 -11.889 1.00 -1.00 \ ATOM 153 C ALA A 506 14.017 22.482 -12.811 1.00 -1.00 \ ATOM 154 O ALA A 506 14.050 22.307 -14.034 1.00 -1.00 \ ATOM 155 CB ALA A 506 14.171 20.422 -11.396 1.00 -1.00 \ ATOM 156 N HIS A 507 13.215 23.383 -12.241 1.00 1.39 \ ATOM 157 CA HIS A 507 12.338 24.210 -13.059 1.00 1.39 \ ATOM 158 C HIS A 507 13.133 25.172 -13.928 1.00 1.39 \ ATOM 159 O HIS A 507 12.739 25.459 -15.064 1.00 1.39 \ ATOM 160 CB HIS A 507 11.371 24.981 -12.173 1.00 1.39 \ ATOM 161 CG HIS A 507 10.744 26.150 -12.856 1.00 1.39 \ ATOM 162 ND1 HIS A 507 10.038 26.028 -14.032 1.00 1.39 \ ATOM 163 CD2 HIS A 507 10.719 27.463 -12.535 1.00 1.39 \ ATOM 164 CE1 HIS A 507 9.600 27.217 -14.403 1.00 1.39 \ ATOM 165 NE2 HIS A 507 9.996 28.104 -13.510 1.00 1.39 \ ATOM 166 N LEU A 508 14.247 25.695 -13.410 1.00 -0.57 \ ATOM 167 CA LEU A 508 15.094 26.561 -14.222 1.00 -0.57 \ ATOM 168 C LEU A 508 15.761 25.790 -15.351 1.00 -0.57 \ ATOM 169 O LEU A 508 16.074 26.371 -16.397 1.00 -0.57 \ ATOM 170 CB LEU A 508 16.148 27.236 -13.352 1.00 -0.57 \ ATOM 171 CG LEU A 508 15.667 28.480 -12.609 1.00 -0.57 \ ATOM 172 CD1 LEU A 508 16.597 28.783 -11.435 1.00 -0.57 \ ATOM 173 CD2 LEU A 508 15.611 29.663 -13.554 1.00 -0.57 \ ATOM 174 N LYS A 509 15.996 24.491 -15.159 1.00 -0.56 \ ATOM 175 CA LYS A 509 16.507 23.674 -16.252 1.00 -0.56 \ ATOM 176 C LYS A 509 15.528 23.665 -17.419 1.00 -0.56 \ ATOM 177 O LYS A 509 15.938 23.660 -18.584 1.00 -0.56 \ ATOM 178 CB LYS A 509 16.786 22.253 -15.760 1.00 -0.56 \ ATOM 179 N ILE A 510 14.227 23.687 -17.123 1.00 -0.07 \ ATOM 180 CA ILE A 510 13.224 23.759 -18.181 1.00 -0.07 \ ATOM 181 C ILE A 510 13.330 25.084 -18.925 1.00 -0.07 \ ATOM 182 O ILE A 510 13.279 25.126 -20.160 1.00 -0.07 \ ATOM 183 CB ILE A 510 11.815 23.540 -17.595 1.00 -0.07 \ ATOM 184 CG1 ILE A 510 11.583 22.055 -17.301 1.00 -0.07 \ ATOM 185 CG2 ILE A 510 10.745 24.079 -18.532 1.00 -0.07 \ ATOM 186 CD1 ILE A 510 11.523 21.183 -18.540 1.00 -0.07 \ ATOM 187 N HIS A 511 13.503 26.186 -18.189 1.00 1.39 \ ATOM 188 CA HIS A 511 13.676 27.495 -18.810 1.00 1.39 \ ATOM 189 C HIS A 511 14.892 27.564 -19.725 1.00 1.39 \ ATOM 190 O HIS A 511 15.000 28.515 -20.507 1.00 1.39 \ ATOM 191 CB HIS A 511 13.803 28.581 -17.739 1.00 1.39 \ ATOM 192 CG HIS A 511 12.496 29.165 -17.307 1.00 1.39 \ ATOM 193 ND1 HIS A 511 11.688 29.886 -18.159 1.00 1.39 \ ATOM 194 CD2 HIS A 511 11.866 29.156 -16.109 1.00 1.39 \ ATOM 195 CE1 HIS A 511 10.611 30.287 -17.508 1.00 1.39 \ ATOM 196 NE2 HIS A 511 10.693 29.855 -16.263 1.00 1.39 \ ATOM 197 N SER A 512 15.800 26.591 -19.655 1.00 0.39 \ ATOM 198 CA SER A 512 17.018 26.601 -20.454 1.00 0.39 \ ATOM 199 C SER A 512 16.806 26.088 -21.876 1.00 0.39 \ ATOM 200 O SER A 512 17.787 25.689 -22.517 1.00 0.39 \ ATOM 201 CB SER A 512 18.114 25.777 -19.767 1.00 0.39 \ ATOM 202 OG SER A 512 18.584 26.411 -18.590 1.00 0.39 \ ATOM 203 N LYS A 513 15.567 26.069 -22.370 1.00 0.53 \ ATOM 204 CA LYS A 513 15.303 25.707 -23.759 1.00 0.53 \ ATOM 205 C LYS A 513 16.152 26.555 -24.697 1.00 0.53 \ ATOM 206 O LYS A 513 16.099 27.789 -24.654 1.00 0.53 \ ATOM 207 CB LYS A 513 13.815 25.884 -24.068 1.00 0.53 \ ATOM 208 CG LYS A 513 13.258 27.248 -23.687 1.00 0.53 \ ATOM 209 CD LYS A 513 11.934 27.127 -22.962 1.00 0.53 \ ATOM 210 CE LYS A 513 11.534 28.457 -22.342 1.00 0.53 \ ATOM 211 NZ LYS A 513 10.343 28.329 -21.455 1.00 0.53 \ ATOM 212 N GLU A 514 16.941 25.883 -25.535 1.00 -1.00 \ ATOM 213 CA GLU A 514 17.970 26.523 -26.359 1.00 -1.00 \ ATOM 214 C GLU A 514 18.976 27.286 -25.492 1.00 -1.00 \ ATOM 215 O GLU A 514 18.753 28.438 -25.113 1.00 -1.00 \ ATOM 216 CB GLU A 514 17.344 27.461 -27.399 1.00 -1.00 \ ATOM 217 CG GLU A 514 16.907 26.786 -28.694 1.00 -1.00 \ ATOM 218 CD GLU A 514 15.780 25.791 -28.495 1.00 -1.00 \ ATOM 219 OE1 GLU A 514 16.065 24.580 -28.384 1.00 -1.00 \ ATOM 220 OE2 GLU A 514 14.608 26.221 -28.448 1.00 -1.00 \ """, "e6ml2A3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6ml2A3_csv", state=0, origin=1) cmd.zoom("e6ml2A3_csv", animate=-1)