cmd.read_pdbstr("""\ ATOM 1 N LYS A 487 6.967 29.925 0.311 1.00 -1.00 \ ATOM 2 CA LYS A 487 7.658 29.632 -0.945 1.00 -1.00 \ ATOM 3 C LYS A 487 8.697 30.723 -1.170 1.00 -1.00 \ ATOM 4 O LYS A 487 8.464 31.676 -1.925 1.00 -1.00 \ ATOM 5 CB LYS A 487 6.676 29.548 -2.115 1.00 -1.00 \ ATOM 6 CG LYS A 487 5.600 28.486 -1.951 1.00 -1.00 \ ATOM 7 CD LYS A 487 4.719 28.401 -3.186 1.00 -1.00 \ ATOM 8 CE LYS A 487 4.472 26.956 -3.592 1.00 -1.00 \ ATOM 9 NZ LYS A 487 4.026 26.842 -5.008 1.00 -1.00 \ ATOM 10 N PRO A 488 9.863 30.612 -0.529 1.00 1.39 \ ATOM 11 CA PRO A 488 10.843 31.705 -0.561 1.00 1.39 \ ATOM 12 C PRO A 488 11.727 31.739 -1.799 1.00 1.39 \ ATOM 13 O PRO A 488 12.587 32.622 -1.891 1.00 1.39 \ ATOM 14 CB PRO A 488 11.682 31.434 0.694 1.00 1.39 \ ATOM 15 CG PRO A 488 11.658 29.948 0.822 1.00 1.39 \ ATOM 16 CD PRO A 488 10.290 29.511 0.352 1.00 1.39 \ ATOM 17 N PHE A 489 11.556 30.823 -2.747 1.00 -0.66 \ ATOM 18 CA PHE A 489 12.418 30.736 -3.919 1.00 -0.66 \ ATOM 19 C PHE A 489 11.604 31.054 -5.167 1.00 -0.66 \ ATOM 20 O PHE A 489 10.684 30.309 -5.520 1.00 -0.66 \ ATOM 21 CB PHE A 489 13.058 29.351 -4.014 1.00 -0.66 \ ATOM 22 CG PHE A 489 13.791 28.942 -2.765 1.00 -0.66 \ ATOM 23 CD1 PHE A 489 13.317 27.908 -1.974 1.00 -0.66 \ ATOM 24 CD2 PHE A 489 14.945 29.603 -2.376 1.00 -0.66 \ ATOM 25 CE1 PHE A 489 13.988 27.534 -0.823 1.00 -0.66 \ ATOM 26 CE2 PHE A 489 15.619 29.234 -1.227 1.00 -0.66 \ ATOM 27 CZ PHE A 489 15.140 28.199 -0.450 1.00 -0.66 \ ATOM 28 N SER A 490 11.951 32.155 -5.833 1.00 -1.49 \ ATOM 29 CA SER A 490 11.197 32.678 -6.964 1.00 -1.49 \ ATOM 30 C SER A 490 12.048 32.621 -8.224 1.00 -1.49 \ ATOM 31 O SER A 490 13.220 33.012 -8.205 1.00 -1.49 \ ATOM 32 CB SER A 490 10.745 34.116 -6.696 1.00 -1.49 \ ATOM 33 OG SER A 490 10.122 34.680 -7.836 1.00 -1.49 \ ATOM 34 N CYS A 491 11.456 32.151 -9.316 1.00 1.39 \ ATOM 35 CA CYS A 491 12.195 32.019 -10.566 1.00 1.39 \ ATOM 36 C CYS A 491 12.582 33.395 -11.098 1.00 1.39 \ ATOM 37 O CYS A 491 11.721 34.274 -11.216 1.00 1.39 \ ATOM 38 CB CYS A 491 11.364 31.269 -11.605 1.00 1.39 \ ATOM 39 SG CYS A 491 12.215 31.018 -13.181 1.00 1.39 \ ATOM 40 N PRO A 492 13.857 33.621 -11.427 1.00 -1.53 \ ATOM 41 CA PRO A 492 14.258 34.942 -11.935 1.00 -1.53 \ ATOM 42 C PRO A 492 13.715 35.252 -13.317 1.00 -1.53 \ ATOM 43 O PRO A 492 13.685 36.428 -13.700 1.00 -1.53 \ ATOM 44 CB PRO A 492 15.793 34.869 -11.947 1.00 -1.53 \ ATOM 45 CG PRO A 492 16.148 33.652 -11.130 1.00 -1.53 \ ATOM 46 CD PRO A 492 15.003 32.710 -11.285 1.00 -1.53 \ ATOM 47 N GLU A 493 13.285 34.245 -14.077 1.00 -0.56 \ ATOM 48 CA GLU A 493 12.829 34.444 -15.447 1.00 -0.56 \ ATOM 49 C GLU A 493 11.316 34.567 -15.568 1.00 -0.56 \ ATOM 50 O GLU A 493 10.830 35.411 -16.327 1.00 -0.56 \ ATOM 51 CB GLU A 493 13.313 33.296 -16.340 1.00 -0.56 \ ATOM 52 CG GLU A 493 14.794 33.358 -16.690 1.00 -0.56 \ ATOM 53 CD GLU A 493 15.125 34.463 -17.679 1.00 -0.56 \ ATOM 54 OE1 GLU A 493 14.188 35.055 -18.257 1.00 -0.56 \ ATOM 55 OE2 GLU A 493 16.327 34.740 -17.878 1.00 -0.56 \ ATOM 56 N CYS A 494 10.553 33.748 -14.839 1.00 1.39 \ ATOM 57 CA CYS A 494 9.102 33.749 -14.953 1.00 1.39 \ ATOM 58 C CYS A 494 8.372 34.107 -13.667 1.00 1.39 \ ATOM 59 O CYS A 494 7.200 34.492 -13.737 1.00 1.39 \ ATOM 60 CB CYS A 494 8.602 32.378 -15.439 1.00 1.39 \ ATOM 61 SG CYS A 494 8.564 31.096 -14.169 1.00 1.39 \ ATOM 62 N GLY A 495 9.014 33.992 -12.507 1.00 0.48 \ ATOM 63 CA GLY A 495 8.396 34.377 -11.257 1.00 0.48 \ ATOM 64 C GLY A 495 7.684 33.271 -10.509 1.00 0.48 \ ATOM 65 O GLY A 495 7.071 33.548 -9.470 1.00 0.48 \ ATOM 66 N LEU A 496 7.735 32.034 -11.000 1.00 0.53 \ ATOM 67 CA LEU A 496 7.129 30.920 -10.281 1.00 0.53 \ ATOM 68 C LEU A 496 7.834 30.713 -8.947 1.00 0.53 \ ATOM 69 O LEU A 496 9.065 30.646 -8.885 1.00 0.53 \ ATOM 70 CB LEU A 496 7.197 29.645 -11.122 1.00 0.53 \ ATOM 71 CG LEU A 496 5.869 28.992 -11.514 1.00 0.53 \ ATOM 72 CD1 LEU A 496 6.102 27.593 -12.068 1.00 0.53 \ ATOM 73 CD2 LEU A 496 4.914 28.952 -10.331 1.00 0.53 \ ATOM 74 N GLN A 497 7.051 30.616 -7.878 1.00 -1.50 \ ATOM 75 CA GLN A 497 7.586 30.480 -6.531 1.00 -1.50 \ ATOM 76 C GLN A 497 7.580 29.019 -6.103 1.00 -1.50 \ ATOM 77 O GLN A 497 6.641 28.275 -6.403 1.00 -1.50 \ ATOM 78 CB GLN A 497 6.784 31.325 -5.541 1.00 -1.50 \ ATOM 79 CG GLN A 497 7.069 32.814 -5.643 1.00 -1.50 \ ATOM 80 CD GLN A 497 5.960 33.662 -5.057 1.00 -1.50 \ ATOM 81 OE1 GLN A 497 4.781 33.331 -5.174 1.00 -1.50 \ ATOM 82 NE2 GLN A 497 6.334 34.768 -4.425 1.00 -1.50 \ ATOM 83 N PHE A 498 8.636 28.615 -5.402 1.00 1.39 \ ATOM 84 CA PHE A 498 8.814 27.239 -4.970 1.00 1.39 \ ATOM 85 C PHE A 498 9.139 27.203 -3.485 1.00 1.39 \ ATOM 86 O PHE A 498 9.820 28.087 -2.957 1.00 1.39 \ ATOM 87 CB PHE A 498 9.933 26.540 -5.757 1.00 1.39 \ ATOM 88 CG PHE A 498 9.659 26.427 -7.227 1.00 1.39 \ ATOM 89 CD1 PHE A 498 9.945 27.480 -8.080 1.00 1.39 \ ATOM 90 CD2 PHE A 498 9.119 25.269 -7.756 1.00 1.39 \ ATOM 91 CE1 PHE A 498 9.694 27.380 -9.432 1.00 1.39 \ ATOM 92 CE2 PHE A 498 8.866 25.162 -9.107 1.00 1.39 \ ATOM 93 CZ PHE A 498 9.151 26.220 -9.946 1.00 1.39 \ ATOM 94 N ALA A 499 8.642 26.163 -2.815 1.00 -0.57 \ ATOM 95 CA ALA A 499 8.964 25.954 -1.411 1.00 -0.57 \ ATOM 96 C ALA A 499 10.374 25.417 -1.212 1.00 -0.57 \ ATOM 97 O ALA A 499 10.954 25.622 -0.139 1.00 -0.57 \ ATOM 98 CB ALA A 499 7.954 24.997 -0.772 1.00 -0.57 \ ATOM 99 N ARG A 500 10.940 24.748 -2.215 1.00 -1.52 \ ATOM 100 CA ARG A 500 12.244 24.116 -2.093 1.00 -1.52 \ ATOM 101 C ARG A 500 13.145 24.551 -3.239 1.00 -1.52 \ ATOM 102 O ARG A 500 12.688 24.725 -4.373 1.00 -1.52 \ ATOM 103 CB ARG A 500 12.111 22.590 -2.071 1.00 -1.52 \ ATOM 104 CG ARG A 500 11.639 22.043 -0.733 1.00 -1.52 \ ATOM 105 CD ARG A 500 11.582 20.526 -0.737 1.00 -1.52 \ ATOM 106 NE ARG A 500 12.729 19.933 -1.418 1.00 -1.52 \ ATOM 107 CZ ARG A 500 12.891 18.627 -1.601 1.00 -1.52 \ ATOM 108 NH1 ARG A 500 11.979 17.776 -1.152 1.00 -1.52 \ ATOM 109 NH2 ARG A 500 13.965 18.173 -2.232 1.00 -1.52 \ ATOM 110 N LEU A 501 14.433 24.719 -2.928 1.00 -0.61 \ ATOM 111 CA LEU A 501 15.397 25.168 -3.927 1.00 -0.61 \ ATOM 112 C LEU A 501 15.697 24.081 -4.953 1.00 -0.61 \ ATOM 113 O LEU A 501 16.067 24.391 -6.091 1.00 -0.61 \ ATOM 114 CB LEU A 501 16.684 25.622 -3.236 1.00 -0.61 \ ATOM 115 CG LEU A 501 17.757 26.306 -4.083 1.00 -0.61 \ ATOM 116 CD1 LEU A 501 17.211 27.564 -4.738 1.00 -0.61 \ ATOM 117 CD2 LEU A 501 18.972 26.630 -3.228 1.00 -0.61 \ ATOM 118 N ASP A 502 15.547 22.809 -4.572 1.00 -0.06 \ ATOM 119 CA ASP A 502 15.766 21.722 -5.522 1.00 -0.06 \ ATOM 120 C ASP A 502 14.821 21.832 -6.712 1.00 -0.06 \ ATOM 121 O ASP A 502 15.218 21.582 -7.856 1.00 -0.06 \ ATOM 122 CB ASP A 502 15.584 20.369 -4.832 1.00 -0.06 \ ATOM 123 CG ASP A 502 16.418 20.233 -3.574 1.00 -0.06 \ ATOM 124 OD1 ASP A 502 16.049 19.414 -2.707 1.00 -0.06 \ ATOM 125 OD2 ASP A 502 17.442 20.938 -3.452 1.00 -0.06 \ ATOM 126 N ASN A 503 13.567 22.213 -6.461 1.00 -0.04 \ ATOM 127 CA ASN A 503 12.563 22.226 -7.518 1.00 -0.04 \ ATOM 128 C ASN A 503 12.690 23.444 -8.424 1.00 -0.04 \ ATOM 129 O ASN A 503 12.292 23.380 -9.592 1.00 -0.04 \ ATOM 130 CB ASN A 503 11.158 22.152 -6.910 1.00 -0.04 \ ATOM 131 CG ASN A 503 10.945 20.899 -6.073 1.00 -0.04 \ ATOM 132 OD1 ASN A 503 11.731 19.953 -6.141 1.00 -0.04 \ ATOM 133 ND2 ASN A 503 9.887 20.893 -5.270 1.00 -0.04 \ ATOM 134 N LEU A 504 13.235 24.553 -7.917 1.00 0.55 \ ATOM 135 CA LEU A 504 13.497 25.695 -8.786 1.00 0.55 \ ATOM 136 C LEU A 504 14.728 25.447 -9.651 1.00 0.55 \ ATOM 137 O LEU A 504 14.774 25.869 -10.812 1.00 0.55 \ ATOM 138 CB LEU A 504 13.668 26.961 -7.950 1.00 0.55 \ ATOM 139 CG LEU A 504 14.316 28.122 -8.703 1.00 0.55 \ ATOM 140 CD1 LEU A 504 13.268 28.746 -9.599 1.00 0.55 \ ATOM 141 CD2 LEU A 504 14.902 29.174 -7.767 1.00 0.55 \ ATOM 142 N LYS A 505 15.735 24.764 -9.100 1.00 -0.05 \ ATOM 143 CA LYS A 505 16.864 24.312 -9.908 1.00 -0.05 \ ATOM 144 C LYS A 505 16.383 23.482 -11.087 1.00 -0.05 \ ATOM 145 O LYS A 505 16.823 23.685 -12.224 1.00 -0.05 \ ATOM 146 CB LYS A 505 17.840 23.501 -9.051 1.00 -0.05 \ ATOM 147 CG LYS A 505 18.665 24.312 -8.074 1.00 -0.05 \ ATOM 148 CD LYS A 505 20.076 23.753 -7.984 1.00 -0.05 \ ATOM 149 CE LYS A 505 20.725 24.039 -6.641 1.00 -0.05 \ ATOM 150 NZ LYS A 505 20.300 23.060 -5.605 1.00 -0.05 \ ATOM 151 N ALA A 506 15.468 22.543 -10.835 1.00 -1.00 \ ATOM 152 CA ALA A 506 14.907 21.750 -11.924 1.00 -1.00 \ ATOM 153 C ALA A 506 14.049 22.607 -12.846 1.00 -1.00 \ ATOM 154 O ALA A 506 14.049 22.404 -14.066 1.00 -1.00 \ ATOM 155 CB ALA A 506 14.099 20.581 -11.361 1.00 -1.00 \ ATOM 156 N HIS A 507 13.317 23.575 -12.285 1.00 1.39 \ ATOM 157 CA HIS A 507 12.485 24.449 -13.105 1.00 1.39 \ ATOM 158 C HIS A 507 13.305 25.493 -13.855 1.00 1.39 \ ATOM 159 O HIS A 507 12.794 26.118 -14.787 1.00 1.39 \ ATOM 160 CB HIS A 507 11.426 25.143 -12.245 1.00 1.39 \ ATOM 161 CG HIS A 507 10.787 26.322 -12.913 1.00 1.39 \ ATOM 162 ND1 HIS A 507 9.757 26.196 -13.820 1.00 1.39 \ ATOM 163 CD2 HIS A 507 11.055 27.647 -12.831 1.00 1.39 \ ATOM 164 CE1 HIS A 507 9.407 27.393 -14.257 1.00 1.39 \ ATOM 165 NE2 HIS A 507 10.180 28.291 -13.673 1.00 1.39 \ ATOM 166 N LEU A 508 14.560 25.713 -13.481 1.00 -0.57 \ ATOM 167 CA LEU A 508 15.379 26.592 -14.304 1.00 -0.57 \ ATOM 168 C LEU A 508 15.938 25.865 -15.521 1.00 -0.57 \ ATOM 169 O LEU A 508 16.352 26.517 -16.487 1.00 -0.57 \ ATOM 170 CB LEU A 508 16.499 27.200 -13.460 1.00 -0.57 \ ATOM 171 CG LEU A 508 16.051 28.445 -12.681 1.00 -0.57 \ ATOM 172 CD1 LEU A 508 17.092 28.863 -11.658 1.00 -0.57 \ ATOM 173 CD2 LEU A 508 15.725 29.607 -13.618 1.00 -0.57 \ ATOM 174 N LYS A 509 15.942 24.530 -15.498 1.00 -0.56 \ ATOM 175 CA LYS A 509 16.412 23.759 -16.645 1.00 -0.56 \ ATOM 176 C LYS A 509 15.449 23.874 -17.824 1.00 -0.56 \ ATOM 177 O LYS A 509 15.880 24.057 -18.968 1.00 -0.56 \ ATOM 178 CB LYS A 509 16.603 22.297 -16.241 1.00 -0.56 \ ATOM 179 CG LYS A 509 17.780 22.060 -15.304 1.00 -0.56 \ ATOM 180 CD LYS A 509 18.236 20.607 -15.350 1.00 -0.56 \ ATOM 181 CE LYS A 509 19.210 20.285 -14.223 1.00 -0.56 \ ATOM 182 NZ LYS A 509 19.610 18.849 -14.243 1.00 -0.56 \ ATOM 183 N ILE A 510 14.141 23.765 -17.565 1.00 -0.07 \ ATOM 184 CA ILE A 510 13.141 23.930 -18.615 1.00 -0.07 \ ATOM 185 C ILE A 510 13.230 25.318 -19.239 1.00 -0.07 \ ATOM 186 O ILE A 510 12.908 25.484 -20.421 1.00 -0.07 \ ATOM 187 CB ILE A 510 11.734 23.633 -18.051 1.00 -0.07 \ ATOM 188 CG1 ILE A 510 10.646 23.817 -19.110 1.00 -0.07 \ ATOM 189 CG2 ILE A 510 11.454 24.468 -16.829 1.00 -0.07 \ ATOM 190 CD1 ILE A 510 9.260 23.611 -18.557 1.00 -0.07 \ ATOM 191 N HIS A 511 13.688 26.321 -18.482 1.00 1.39 \ ATOM 192 CA HIS A 511 13.921 27.641 -19.063 1.00 1.39 \ ATOM 193 C HIS A 511 15.190 27.656 -19.911 1.00 1.39 \ ATOM 194 O HIS A 511 15.245 28.324 -20.953 1.00 1.39 \ ATOM 195 CB HIS A 511 14.014 28.690 -17.958 1.00 1.39 \ ATOM 196 CG HIS A 511 12.692 29.266 -17.555 1.00 1.39 \ ATOM 197 ND1 HIS A 511 11.826 29.852 -18.453 1.00 1.39 \ ATOM 198 CD2 HIS A 511 12.087 29.339 -16.347 1.00 1.39 \ ATOM 199 CE1 HIS A 511 10.747 30.267 -17.814 1.00 1.39 \ ATOM 200 NE2 HIS A 511 10.880 29.966 -16.534 1.00 1.39 \ ATOM 201 N SER A 512 16.224 26.932 -19.473 1.00 0.39 \ ATOM 202 CA SER A 512 17.466 26.876 -20.239 1.00 0.39 \ ATOM 203 C SER A 512 17.231 26.304 -21.628 1.00 0.39 \ ATOM 204 O SER A 512 17.697 26.867 -22.625 1.00 0.39 \ ATOM 205 CB SER A 512 18.522 26.053 -19.497 1.00 0.39 \ ATOM 206 OG SER A 512 19.832 26.503 -19.805 1.00 0.39 \ ATOM 207 N LYS A 513 16.522 25.186 -21.715 1.00 0.53 \ ATOM 208 CA LYS A 513 16.188 24.600 -23.004 1.00 0.53 \ ATOM 209 C LYS A 513 15.007 25.291 -23.675 1.00 0.53 \ ATOM 210 O LYS A 513 14.610 24.875 -24.770 1.00 0.53 \ ATOM 211 CB LYS A 513 15.902 23.104 -22.841 1.00 0.53 \ ATOM 212 CG LYS A 513 16.965 22.366 -22.034 1.00 0.53 \ ATOM 213 CD LYS A 513 18.302 22.347 -22.768 1.00 0.53 \ ATOM 214 CE LYS A 513 19.360 23.183 -22.057 1.00 0.53 \ ATOM 215 NZ LYS A 513 20.626 23.226 -22.844 1.00 0.53 \ ATOM 216 N GLU A 514 14.438 26.314 -23.038 1.00 -1.00 \ ATOM 217 CA GLU A 514 13.427 27.181 -23.641 1.00 -1.00 \ ATOM 218 C GLU A 514 12.230 26.415 -24.203 1.00 -1.00 \ ATOM 219 O GLU A 514 11.488 26.931 -25.038 1.00 -1.00 \ ATOM 220 CB GLU A 514 14.068 28.033 -24.739 1.00 -1.00 \ ATOM 221 CG GLU A 514 15.328 28.762 -24.292 1.00 -1.00 \ ATOM 222 CD GLU A 514 16.511 28.501 -25.205 1.00 -1.00 \ ATOM 223 OE1 GLU A 514 16.303 27.964 -26.313 1.00 -1.00 \ ATOM 224 OE2 GLU A 514 17.651 28.830 -24.812 1.00 -1.00 \ """, "e6ml3A2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6ml3A2_csv", state=0, origin=1) cmd.zoom("e6ml3A2_csv", animate=-1)