cmd.read_pdbstr("""\ ATOM 1 N LYS A 487 7.040 29.870 0.485 1.00 -1.00 \ ATOM 2 CA LYS A 487 7.708 29.557 -0.779 1.00 -1.00 \ ATOM 3 C LYS A 487 8.704 30.673 -1.058 1.00 -1.00 \ ATOM 4 O LYS A 487 8.440 31.571 -1.870 1.00 -1.00 \ ATOM 5 CB LYS A 487 6.694 29.395 -1.912 1.00 -1.00 \ ATOM 6 CG LYS A 487 5.755 28.213 -1.725 1.00 -1.00 \ ATOM 7 CD LYS A 487 4.714 28.137 -2.828 1.00 -1.00 \ ATOM 8 CE LYS A 487 3.875 26.875 -2.704 1.00 -1.00 \ ATOM 9 NZ LYS A 487 2.744 26.843 -3.672 1.00 -1.00 \ ATOM 10 N PRO A 488 9.865 30.652 -0.398 1.00 1.39 \ ATOM 11 CA PRO A 488 10.792 31.786 -0.472 1.00 1.39 \ ATOM 12 C PRO A 488 11.725 31.769 -1.673 1.00 1.39 \ ATOM 13 O PRO A 488 12.590 32.646 -1.769 1.00 1.39 \ ATOM 14 CB PRO A 488 11.592 31.642 0.828 1.00 1.39 \ ATOM 15 CG PRO A 488 11.651 30.164 1.040 1.00 1.39 \ ATOM 16 CD PRO A 488 10.347 29.602 0.519 1.00 1.39 \ ATOM 17 N PHE A 489 11.588 30.813 -2.587 1.00 -0.66 \ ATOM 18 CA PHE A 489 12.484 30.684 -3.732 1.00 -0.66 \ ATOM 19 C PHE A 489 11.696 30.986 -5.001 1.00 -0.66 \ ATOM 20 O PHE A 489 10.850 30.189 -5.422 1.00 -0.66 \ ATOM 21 CB PHE A 489 13.112 29.293 -3.766 1.00 -0.66 \ ATOM 22 CG PHE A 489 13.769 28.904 -2.474 1.00 -0.66 \ ATOM 23 CD1 PHE A 489 13.234 27.903 -1.681 1.00 -0.66 \ ATOM 24 CD2 PHE A 489 14.908 29.563 -2.037 1.00 -0.66 \ ATOM 25 CE1 PHE A 489 13.833 27.552 -0.486 1.00 -0.66 \ ATOM 26 CE2 PHE A 489 15.512 29.219 -0.843 1.00 -0.66 \ ATOM 27 CZ PHE A 489 14.973 28.212 -0.066 1.00 -0.66 \ ATOM 28 N SER A 490 11.980 32.136 -5.607 1.00 -1.49 \ ATOM 29 CA SER A 490 11.227 32.647 -6.744 1.00 -1.49 \ ATOM 30 C SER A 490 12.084 32.590 -8.001 1.00 -1.49 \ ATOM 31 O SER A 490 13.226 33.063 -8.001 1.00 -1.49 \ ATOM 32 CB SER A 490 10.789 34.090 -6.485 1.00 -1.49 \ ATOM 33 OG SER A 490 10.205 34.662 -7.643 1.00 -1.49 \ ATOM 34 N CYS A 491 11.529 32.027 -9.066 1.00 1.39 \ ATOM 35 CA CYS A 491 12.240 31.944 -10.333 1.00 1.39 \ ATOM 36 C CYS A 491 12.500 33.343 -10.878 1.00 1.39 \ ATOM 37 O CYS A 491 11.545 34.109 -11.079 1.00 1.39 \ ATOM 38 CB CYS A 491 11.428 31.143 -11.345 1.00 1.39 \ ATOM 39 SG CYS A 491 12.202 31.051 -12.975 1.00 1.39 \ ATOM 40 N PRO A 492 13.757 33.718 -11.131 1.00 -1.53 \ ATOM 41 CA PRO A 492 14.031 35.057 -11.671 1.00 -1.53 \ ATOM 42 C PRO A 492 13.544 35.256 -13.095 1.00 -1.53 \ ATOM 43 O PRO A 492 13.505 36.402 -13.558 1.00 -1.53 \ ATOM 44 CB PRO A 492 15.559 35.162 -11.591 1.00 -1.53 \ ATOM 45 CG PRO A 492 16.029 33.746 -11.658 1.00 -1.53 \ ATOM 46 CD PRO A 492 14.990 32.936 -10.931 1.00 -1.53 \ ATOM 47 N GLU A 493 13.166 34.188 -13.798 1.00 -0.56 \ ATOM 48 CA GLU A 493 12.720 34.307 -15.181 1.00 -0.56 \ ATOM 49 C GLU A 493 11.209 34.472 -15.302 1.00 -0.56 \ ATOM 50 O GLU A 493 10.743 35.295 -16.097 1.00 -0.56 \ ATOM 51 CB GLU A 493 13.175 33.090 -15.994 1.00 -0.56 \ ATOM 52 CG GLU A 493 14.653 32.753 -15.860 1.00 -0.56 \ ATOM 53 CD GLU A 493 15.567 33.846 -16.384 1.00 -0.56 \ ATOM 54 OE1 GLU A 493 15.143 34.611 -17.276 1.00 -0.56 \ ATOM 55 OE2 GLU A 493 16.714 33.937 -15.898 1.00 -0.56 \ ATOM 56 N CYS A 494 10.429 33.705 -14.534 1.00 1.39 \ ATOM 57 CA CYS A 494 8.976 33.740 -14.646 1.00 1.39 \ ATOM 58 C CYS A 494 8.243 34.031 -13.344 1.00 1.39 \ ATOM 59 O CYS A 494 7.022 34.222 -13.381 1.00 1.39 \ ATOM 60 CB CYS A 494 8.437 32.428 -15.239 1.00 1.39 \ ATOM 61 SG CYS A 494 8.517 31.009 -14.122 1.00 1.39 \ ATOM 62 N GLY A 495 8.930 34.061 -12.204 1.00 0.48 \ ATOM 63 CA GLY A 495 8.301 34.403 -10.947 1.00 0.48 \ ATOM 64 C GLY A 495 7.627 33.260 -10.219 1.00 0.48 \ ATOM 65 O GLY A 495 7.016 33.495 -9.168 1.00 0.48 \ ATOM 66 N LEU A 496 7.710 32.038 -10.737 1.00 0.53 \ ATOM 67 CA LEU A 496 7.113 30.898 -10.056 1.00 0.53 \ ATOM 68 C LEU A 496 7.843 30.645 -8.743 1.00 0.53 \ ATOM 69 O LEU A 496 9.075 30.580 -8.706 1.00 0.53 \ ATOM 70 CB LEU A 496 7.199 29.667 -10.957 1.00 0.53 \ ATOM 71 CG LEU A 496 6.242 28.513 -10.659 1.00 0.53 \ ATOM 72 CD1 LEU A 496 4.803 29.003 -10.690 1.00 0.53 \ ATOM 73 CD2 LEU A 496 6.453 27.387 -11.659 1.00 0.53 \ ATOM 74 N GLN A 497 7.082 30.512 -7.661 1.00 -1.50 \ ATOM 75 CA GLN A 497 7.642 30.387 -6.324 1.00 -1.50 \ ATOM 76 C GLN A 497 7.622 28.934 -5.868 1.00 -1.50 \ ATOM 77 O GLN A 497 6.669 28.198 -6.138 1.00 -1.50 \ ATOM 78 CB GLN A 497 6.857 31.253 -5.339 1.00 -1.50 \ ATOM 79 CG GLN A 497 6.887 32.737 -5.676 1.00 -1.50 \ ATOM 80 CD GLN A 497 6.049 33.567 -4.726 1.00 -1.50 \ ATOM 81 OE1 GLN A 497 6.577 34.243 -3.843 1.00 -1.50 \ ATOM 82 NE2 GLN A 497 4.734 33.525 -4.906 1.00 -1.50 \ ATOM 83 N PHE A 498 8.680 28.533 -5.165 1.00 1.39 \ ATOM 84 CA PHE A 498 8.852 27.164 -4.707 1.00 1.39 \ ATOM 85 C PHE A 498 9.207 27.156 -3.229 1.00 1.39 \ ATOM 86 O PHE A 498 9.925 28.038 -2.746 1.00 1.39 \ ATOM 87 CB PHE A 498 9.972 26.456 -5.478 1.00 1.39 \ ATOM 88 CG PHE A 498 9.714 26.331 -6.952 1.00 1.39 \ ATOM 89 CD1 PHE A 498 10.099 27.335 -7.826 1.00 1.39 \ ATOM 90 CD2 PHE A 498 9.092 25.206 -7.465 1.00 1.39 \ ATOM 91 CE1 PHE A 498 9.863 27.218 -9.183 1.00 1.39 \ ATOM 92 CE2 PHE A 498 8.855 25.084 -8.819 1.00 1.39 \ ATOM 93 CZ PHE A 498 9.241 26.091 -9.679 1.00 1.39 \ ATOM 94 N ALA A 499 8.700 26.150 -2.515 1.00 -0.57 \ ATOM 95 CA ALA A 499 9.092 25.942 -1.128 1.00 -0.57 \ ATOM 96 C ALA A 499 10.489 25.352 -1.013 1.00 -0.57 \ ATOM 97 O ALA A 499 11.128 25.501 0.035 1.00 -0.57 \ ATOM 98 CB ALA A 499 8.078 25.031 -0.428 1.00 -0.57 \ ATOM 99 N ARG A 500 10.970 24.688 -2.061 1.00 -1.52 \ ATOM 100 CA ARG A 500 12.240 23.979 -2.043 1.00 -1.52 \ ATOM 101 C ARG A 500 13.176 24.596 -3.068 1.00 -1.52 \ ATOM 102 O ARG A 500 12.783 24.818 -4.218 1.00 -1.52 \ ATOM 103 CB ARG A 500 12.024 22.505 -2.383 1.00 -1.52 \ ATOM 104 CG ARG A 500 11.347 21.706 -1.283 1.00 -1.52 \ ATOM 105 CD ARG A 500 12.373 20.992 -0.417 1.00 -1.52 \ ATOM 106 NE ARG A 500 13.199 20.081 -1.205 1.00 -1.52 \ ATOM 107 CZ ARG A 500 12.871 18.824 -1.485 1.00 -1.52 \ ATOM 108 NH1 ARG A 500 11.728 18.316 -1.042 1.00 -1.52 \ ATOM 109 NH2 ARG A 500 13.687 18.072 -2.210 1.00 -1.52 \ ATOM 110 N LEU A 501 14.412 24.876 -2.650 1.00 -0.61 \ ATOM 111 CA LEU A 501 15.409 25.348 -3.604 1.00 -0.61 \ ATOM 112 C LEU A 501 15.729 24.278 -4.640 1.00 -0.61 \ ATOM 113 O LEU A 501 16.096 24.606 -5.774 1.00 -0.61 \ ATOM 114 CB LEU A 501 16.674 25.797 -2.871 1.00 -0.61 \ ATOM 115 CG LEU A 501 17.775 26.429 -3.726 1.00 -0.61 \ ATOM 116 CD1 LEU A 501 17.277 27.696 -4.412 1.00 -0.61 \ ATOM 117 CD2 LEU A 501 19.018 26.715 -2.893 1.00 -0.61 \ ATOM 118 N ASP A 502 15.584 23.000 -4.273 1.00 -0.06 \ ATOM 119 CA ASP A 502 15.772 21.912 -5.230 1.00 -0.06 \ ATOM 120 C ASP A 502 14.834 22.057 -6.419 1.00 -0.06 \ ATOM 121 O ASP A 502 15.249 21.929 -7.577 1.00 -0.06 \ ATOM 122 CB ASP A 502 15.524 20.561 -4.555 1.00 -0.06 \ ATOM 123 CG ASP A 502 16.620 20.177 -3.590 1.00 -0.06 \ ATOM 124 OD1 ASP A 502 16.321 19.467 -2.605 1.00 -0.06 \ ATOM 125 OD2 ASP A 502 17.776 20.593 -3.810 1.00 -0.06 \ ATOM 126 N ASN A 503 13.551 22.308 -6.146 1.00 -0.04 \ ATOM 127 CA ASN A 503 12.580 22.414 -7.227 1.00 -0.04 \ ATOM 128 C ASN A 503 12.843 23.632 -8.101 1.00 -0.04 \ ATOM 129 O ASN A 503 12.579 23.591 -9.307 1.00 -0.04 \ ATOM 130 CB ASN A 503 11.155 22.439 -6.673 1.00 -0.04 \ ATOM 131 CG ASN A 503 10.806 21.184 -5.894 1.00 -0.04 \ ATOM 132 OD1 ASN A 503 9.861 21.177 -5.105 1.00 -0.04 \ ATOM 133 ND2 ASN A 503 11.571 20.119 -6.106 1.00 -0.04 \ ATOM 134 N LEU A 504 13.366 24.716 -7.521 1.00 0.55 \ ATOM 135 CA LEU A 504 13.712 25.880 -8.329 1.00 0.55 \ ATOM 136 C LEU A 504 14.887 25.581 -9.253 1.00 0.55 \ ATOM 137 O LEU A 504 14.878 25.978 -10.424 1.00 0.55 \ ATOM 138 CB LEU A 504 14.014 27.084 -7.436 1.00 0.55 \ ATOM 139 CG LEU A 504 14.528 28.320 -8.180 1.00 0.55 \ ATOM 140 CD1 LEU A 504 13.513 28.779 -9.217 1.00 0.55 \ ATOM 141 CD2 LEU A 504 14.870 29.446 -7.213 1.00 0.55 \ ATOM 142 N LYS A 505 15.908 24.884 -8.745 1.00 -0.05 \ ATOM 143 CA LYS A 505 17.039 24.500 -9.586 1.00 -0.05 \ ATOM 144 C LYS A 505 16.581 23.654 -10.766 1.00 -0.05 \ ATOM 145 O LYS A 505 16.975 23.899 -11.912 1.00 -0.05 \ ATOM 146 CB LYS A 505 18.073 23.732 -8.763 1.00 -0.05 \ ATOM 147 CG LYS A 505 18.653 24.497 -7.589 1.00 -0.05 \ ATOM 148 CD LYS A 505 19.787 23.714 -6.942 1.00 -0.05 \ ATOM 149 CE LYS A 505 20.214 24.334 -5.621 1.00 -0.05 \ ATOM 150 NZ LYS A 505 21.633 24.022 -5.286 1.00 -0.05 \ ATOM 151 N ALA A 506 15.749 22.644 -10.502 1.00 -1.00 \ ATOM 152 CA ALA A 506 15.251 21.801 -11.583 1.00 -1.00 \ ATOM 153 C ALA A 506 14.345 22.590 -12.519 1.00 -1.00 \ ATOM 154 O ALA A 506 14.327 22.345 -13.732 1.00 -1.00 \ ATOM 155 CB ALA A 506 14.514 20.592 -11.008 1.00 -1.00 \ ATOM 156 N HIS A 507 13.590 23.547 -11.973 1.00 1.39 \ ATOM 157 CA HIS A 507 12.714 24.370 -12.801 1.00 1.39 \ ATOM 158 C HIS A 507 13.516 25.240 -13.759 1.00 1.39 \ ATOM 159 O HIS A 507 13.136 25.408 -14.923 1.00 1.39 \ ATOM 160 CB HIS A 507 11.828 25.241 -11.912 1.00 1.39 \ ATOM 161 CG HIS A 507 11.092 26.311 -12.656 1.00 1.39 \ ATOM 162 ND1 HIS A 507 9.920 26.071 -13.340 1.00 1.39 \ ATOM 163 CD2 HIS A 507 11.365 27.627 -12.827 1.00 1.39 \ ATOM 164 CE1 HIS A 507 9.501 27.192 -13.898 1.00 1.39 \ ATOM 165 NE2 HIS A 507 10.360 28.151 -13.603 1.00 1.39 \ ATOM 166 N LEU A 508 14.630 25.805 -13.284 1.00 -0.57 \ ATOM 167 CA LEU A 508 15.439 26.673 -14.132 1.00 -0.57 \ ATOM 168 C LEU A 508 16.097 25.906 -15.271 1.00 -0.57 \ ATOM 169 O LEU A 508 16.414 26.496 -16.310 1.00 -0.57 \ ATOM 170 CB LEU A 508 16.483 27.410 -13.292 1.00 -0.57 \ ATOM 171 CG LEU A 508 15.950 28.592 -12.482 1.00 -0.57 \ ATOM 172 CD1 LEU A 508 16.957 29.030 -11.436 1.00 -0.57 \ ATOM 173 CD2 LEU A 508 15.604 29.751 -13.404 1.00 -0.57 \ ATOM 174 N LYS A 509 16.315 24.599 -15.099 1.00 -0.56 \ ATOM 175 CA LYS A 509 16.837 23.795 -16.198 1.00 -0.56 \ ATOM 176 C LYS A 509 15.863 23.749 -17.368 1.00 -0.56 \ ATOM 177 O LYS A 509 16.283 23.604 -18.522 1.00 -0.56 \ ATOM 178 CB LYS A 509 17.165 22.380 -15.719 1.00 -0.56 \ ATOM 179 CG LYS A 509 18.420 22.279 -14.869 1.00 -0.56 \ ATOM 180 CD LYS A 509 18.717 20.833 -14.508 1.00 -0.56 \ ATOM 181 CE LYS A 509 19.975 20.714 -13.664 1.00 -0.56 \ ATOM 182 NZ LYS A 509 21.194 21.132 -14.412 1.00 -0.56 \ ATOM 183 N ILE A 510 14.563 23.871 -17.091 1.00 -0.07 \ ATOM 184 CA ILE A 510 13.574 23.920 -18.163 1.00 -0.07 \ ATOM 185 C ILE A 510 13.721 25.205 -18.967 1.00 -0.07 \ ATOM 186 O ILE A 510 13.587 25.202 -20.197 1.00 -0.07 \ ATOM 187 CB ILE A 510 12.154 23.749 -17.592 1.00 -0.07 \ ATOM 188 CG1 ILE A 510 12.063 22.459 -16.777 1.00 -0.07 \ ATOM 189 CG2 ILE A 510 11.122 23.746 -18.710 1.00 -0.07 \ ATOM 190 CD1 ILE A 510 10.726 22.254 -16.111 1.00 -0.07 \ ATOM 191 N HIS A 511 13.996 26.323 -18.289 1.00 1.39 \ ATOM 192 CA HIS A 511 14.266 27.569 -18.999 1.00 1.39 \ ATOM 193 C HIS A 511 15.520 27.450 -19.855 1.00 1.39 \ ATOM 194 O HIS A 511 15.567 27.966 -20.977 1.00 1.39 \ ATOM 195 CB HIS A 511 14.407 28.724 -18.006 1.00 1.39 \ ATOM 196 CG HIS A 511 13.119 29.144 -17.370 1.00 1.39 \ ATOM 197 ND1 HIS A 511 12.043 29.605 -18.098 1.00 1.39 \ ATOM 198 CD2 HIS A 511 12.740 29.191 -16.070 1.00 1.39 \ ATOM 199 CE1 HIS A 511 11.055 29.909 -17.276 1.00 1.39 \ ATOM 200 NE2 HIS A 511 11.452 29.667 -16.040 1.00 1.39 \ ATOM 201 N SER A 512 16.549 26.772 -19.339 1.00 0.39 \ ATOM 202 CA SER A 512 17.769 26.573 -20.115 1.00 0.39 \ ATOM 203 C SER A 512 17.506 25.707 -21.340 1.00 0.39 \ ATOM 204 O SER A 512 18.060 25.956 -22.418 1.00 0.39 \ ATOM 205 CB SER A 512 18.852 25.944 -19.239 1.00 0.39 \ ATOM 206 OG SER A 512 19.163 26.772 -18.132 1.00 0.39 \ ATOM 207 N LYS A 513 16.662 24.683 -21.194 1.00 0.53 \ ATOM 208 CA LYS A 513 16.327 23.834 -22.332 1.00 0.53 \ ATOM 209 C LYS A 513 15.471 24.583 -23.346 1.00 0.53 \ ATOM 210 O LYS A 513 15.619 24.386 -24.557 1.00 0.53 \ ATOM 211 CB LYS A 513 15.616 22.570 -21.852 1.00 0.53 \ ATOM 212 N GLU A 514 14.569 25.444 -22.869 1.00 -1.00 \ ATOM 213 CA GLU A 514 13.740 26.225 -23.781 1.00 -1.00 \ ATOM 214 C GLU A 514 14.581 27.218 -24.573 1.00 -1.00 \ ATOM 215 O GLU A 514 14.314 27.468 -25.755 1.00 -1.00 \ ATOM 216 CB GLU A 514 12.642 26.949 -23.002 1.00 -1.00 \ ATOM 217 N LYS A 515 15.602 27.789 -23.942 1.00 -1.00 \ ATOM 218 CA LYS A 515 16.492 28.729 -24.611 1.00 -1.00 \ ATOM 219 C LYS A 515 17.586 27.985 -25.371 1.00 -1.00 \ ATOM 220 O LYS A 515 17.618 27.997 -26.601 1.00 -1.00 \ ATOM 221 CB LYS A 515 17.104 29.689 -23.602 1.00 -1.00 \ """, "e6ml4A2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6ml4A2_csv", state=0, origin=1) cmd.zoom("e6ml4A2_csv", animate=-1)