cmd.read_pdbstr("""\ ATOM 1 N LYS A 487 7.177 29.899 0.731 1.00 -1.00 \ ATOM 2 CA LYS A 487 7.825 29.595 -0.545 1.00 -1.00 \ ATOM 3 C LYS A 487 8.841 30.695 -0.821 1.00 -1.00 \ ATOM 4 O LYS A 487 8.588 31.607 -1.620 1.00 -1.00 \ ATOM 5 CB LYS A 487 6.803 29.475 -1.675 1.00 -1.00 \ ATOM 6 CG LYS A 487 5.805 28.341 -1.490 1.00 -1.00 \ ATOM 7 CD LYS A 487 4.872 28.221 -2.684 1.00 -1.00 \ ATOM 8 CE LYS A 487 3.909 27.056 -2.516 1.00 -1.00 \ ATOM 9 NZ LYS A 487 3.001 26.911 -3.687 1.00 -1.00 \ ATOM 10 N PRO A 488 10.008 30.641 -0.174 1.00 1.39 \ ATOM 11 CA PRO A 488 10.961 31.754 -0.255 1.00 1.39 \ ATOM 12 C PRO A 488 11.873 31.730 -1.472 1.00 1.39 \ ATOM 13 O PRO A 488 12.744 32.600 -1.579 1.00 1.39 \ ATOM 14 CB PRO A 488 11.772 31.588 1.036 1.00 1.39 \ ATOM 15 CG PRO A 488 11.794 30.112 1.252 1.00 1.39 \ ATOM 16 CD PRO A 488 10.470 29.583 0.744 1.00 1.39 \ ATOM 17 N PHE A 489 11.710 30.778 -2.387 1.00 -0.66 \ ATOM 18 CA PHE A 489 12.581 30.648 -3.553 1.00 -0.66 \ ATOM 19 C PHE A 489 11.756 30.907 -4.807 1.00 -0.66 \ ATOM 20 O PHE A 489 10.867 30.119 -5.146 1.00 -0.66 \ ATOM 21 CB PHE A 489 13.236 29.269 -3.586 1.00 -0.66 \ ATOM 22 CG PHE A 489 13.897 28.889 -2.291 1.00 -0.66 \ ATOM 23 CD1 PHE A 489 13.323 27.945 -1.456 1.00 -0.66 \ ATOM 24 CD2 PHE A 489 15.084 29.489 -1.902 1.00 -0.66 \ ATOM 25 CE1 PHE A 489 13.927 27.599 -0.261 1.00 -0.66 \ ATOM 26 CE2 PHE A 489 15.691 29.147 -0.709 1.00 -0.66 \ ATOM 27 CZ PHE A 489 15.112 28.201 0.112 1.00 -0.66 \ ATOM 28 N SER A 490 12.057 32.006 -5.495 1.00 -1.49 \ ATOM 29 CA SER A 490 11.288 32.462 -6.645 1.00 -1.49 \ ATOM 30 C SER A 490 12.139 32.393 -7.905 1.00 -1.49 \ ATOM 31 O SER A 490 13.274 32.883 -7.921 1.00 -1.49 \ ATOM 32 CB SER A 490 10.786 33.891 -6.428 1.00 -1.49 \ ATOM 33 OG SER A 490 10.259 34.435 -7.626 1.00 -1.49 \ ATOM 34 N CYS A 491 11.589 31.799 -8.957 1.00 1.39 \ ATOM 35 CA CYS A 491 12.298 31.701 -10.225 1.00 1.39 \ ATOM 36 C CYS A 491 12.535 33.090 -10.806 1.00 1.39 \ ATOM 37 O CYS A 491 11.571 33.850 -10.986 1.00 1.39 \ ATOM 38 CB CYS A 491 11.517 30.848 -11.219 1.00 1.39 \ ATOM 39 SG CYS A 491 12.278 30.768 -12.859 1.00 1.39 \ ATOM 40 N PRO A 492 13.780 33.462 -11.114 1.00 -1.53 \ ATOM 41 CA PRO A 492 14.031 34.795 -11.683 1.00 -1.53 \ ATOM 42 C PRO A 492 13.531 34.957 -13.108 1.00 -1.53 \ ATOM 43 O PRO A 492 13.511 36.089 -13.608 1.00 -1.53 \ ATOM 44 CB PRO A 492 15.557 34.920 -11.617 1.00 -1.53 \ ATOM 45 CG PRO A 492 16.044 33.510 -11.677 1.00 -1.53 \ ATOM 46 CD PRO A 492 15.022 32.689 -10.938 1.00 -1.53 \ ATOM 47 N GLU A 493 13.126 33.876 -13.773 1.00 -0.56 \ ATOM 48 CA GLU A 493 12.687 33.952 -15.160 1.00 -0.56 \ ATOM 49 C GLU A 493 11.175 34.115 -15.280 1.00 -0.56 \ ATOM 50 O GLU A 493 10.701 34.972 -16.033 1.00 -0.56 \ ATOM 51 CB GLU A 493 13.144 32.705 -15.924 1.00 -0.56 \ ATOM 52 CG GLU A 493 14.647 32.472 -15.895 1.00 -0.56 \ ATOM 53 CD GLU A 493 15.427 33.591 -16.557 1.00 -0.56 \ ATOM 54 OE1 GLU A 493 14.900 34.209 -17.506 1.00 -0.56 \ ATOM 55 OE2 GLU A 493 16.571 33.853 -16.128 1.00 -0.56 \ ATOM 56 N CYS A 494 10.405 33.307 -14.549 1.00 1.39 \ ATOM 57 CA CYS A 494 8.954 33.334 -14.649 1.00 1.39 \ ATOM 58 C CYS A 494 8.245 33.690 -13.350 1.00 1.39 \ ATOM 59 O CYS A 494 7.033 33.928 -13.378 1.00 1.39 \ ATOM 60 CB CYS A 494 8.424 31.980 -15.148 1.00 1.39 \ ATOM 61 SG CYS A 494 8.557 30.631 -13.955 1.00 1.39 \ ATOM 62 N GLY A 495 8.950 33.729 -12.221 1.00 0.48 \ ATOM 63 CA GLY A 495 8.352 34.117 -10.962 1.00 0.48 \ ATOM 64 C GLY A 495 7.694 33.001 -10.181 1.00 0.48 \ ATOM 65 O GLY A 495 7.078 33.277 -9.143 1.00 0.48 \ ATOM 66 N LEU A 496 7.796 31.757 -10.640 1.00 0.53 \ ATOM 67 CA LEU A 496 7.222 30.638 -9.904 1.00 0.53 \ ATOM 68 C LEU A 496 7.954 30.458 -8.579 1.00 0.53 \ ATOM 69 O LEU A 496 9.187 30.425 -8.538 1.00 0.53 \ ATOM 70 CB LEU A 496 7.300 29.361 -10.738 1.00 0.53 \ ATOM 71 CG LEU A 496 6.517 28.153 -10.225 1.00 0.53 \ ATOM 72 CD1 LEU A 496 5.061 28.520 -9.989 1.00 0.53 \ ATOM 73 CD2 LEU A 496 6.625 26.999 -11.208 1.00 0.53 \ ATOM 74 N GLN A 497 7.192 30.349 -7.495 1.00 -1.50 \ ATOM 75 CA GLN A 497 7.748 30.272 -6.152 1.00 -1.50 \ ATOM 76 C GLN A 497 7.769 28.829 -5.666 1.00 -1.50 \ ATOM 77 O GLN A 497 6.830 28.064 -5.911 1.00 -1.50 \ ATOM 78 CB GLN A 497 6.947 31.143 -5.183 1.00 -1.50 \ ATOM 79 CG GLN A 497 7.026 32.630 -5.492 1.00 -1.50 \ ATOM 80 CD GLN A 497 6.072 33.453 -4.651 1.00 -1.50 \ ATOM 81 OE1 GLN A 497 4.861 33.238 -4.676 1.00 -1.50 \ ATOM 82 NE2 GLN A 497 6.616 34.403 -3.900 1.00 -1.50 \ ATOM 83 N PHE A 498 8.844 28.465 -4.971 1.00 1.39 \ ATOM 84 CA PHE A 498 9.043 27.108 -4.487 1.00 1.39 \ ATOM 85 C PHE A 498 9.363 27.125 -3.000 1.00 1.39 \ ATOM 86 O PHE A 498 9.984 28.062 -2.490 1.00 1.39 \ ATOM 87 CB PHE A 498 10.176 26.400 -5.244 1.00 1.39 \ ATOM 88 CG PHE A 498 9.862 26.124 -6.683 1.00 1.39 \ ATOM 89 CD1 PHE A 498 10.104 27.080 -7.655 1.00 1.39 \ ATOM 90 CD2 PHE A 498 9.325 24.906 -7.066 1.00 1.39 \ ATOM 91 CE1 PHE A 498 9.815 26.827 -8.982 1.00 1.39 \ ATOM 92 CE2 PHE A 498 9.034 24.647 -8.390 1.00 1.39 \ ATOM 93 CZ PHE A 498 9.279 25.609 -9.349 1.00 1.39 \ ATOM 94 N ALA A 499 8.937 26.068 -2.309 1.00 -0.57 \ ATOM 95 CA ALA A 499 9.272 25.908 -0.901 1.00 -0.57 \ ATOM 96 C ALA A 499 10.700 25.426 -0.691 1.00 -0.57 \ ATOM 97 O ALA A 499 11.253 25.623 0.397 1.00 -0.57 \ ATOM 98 CB ALA A 499 8.298 24.933 -0.235 1.00 -0.57 \ ATOM 99 N ARG A 500 11.308 24.806 -1.701 1.00 -1.52 \ ATOM 100 CA ARG A 500 12.637 24.225 -1.585 1.00 -1.52 \ ATOM 101 C ARG A 500 13.540 24.757 -2.686 1.00 -1.52 \ ATOM 102 O ARG A 500 13.092 24.979 -3.814 1.00 -1.52 \ ATOM 103 CB ARG A 500 12.583 22.698 -1.665 1.00 -1.52 \ ATOM 104 CG ARG A 500 11.548 22.053 -0.769 1.00 -1.52 \ ATOM 105 CD ARG A 500 12.123 20.828 -0.088 1.00 -1.52 \ ATOM 106 NE ARG A 500 12.839 19.965 -1.022 1.00 -1.52 \ ATOM 107 CZ ARG A 500 12.476 18.722 -1.318 1.00 -1.52 \ ATOM 108 NH1 ARG A 500 11.401 18.192 -0.751 1.00 -1.52 \ ATOM 109 NH2 ARG A 500 13.188 18.007 -2.179 1.00 -1.52 \ ATOM 110 N LEU A 501 14.820 24.941 -2.355 1.00 -0.61 \ ATOM 111 CA LEU A 501 15.770 25.456 -3.335 1.00 -0.61 \ ATOM 112 C LEU A 501 16.092 24.415 -4.401 1.00 -0.61 \ ATOM 113 O LEU A 501 16.250 24.757 -5.579 1.00 -0.61 \ ATOM 114 CB LEU A 501 17.048 25.917 -2.634 1.00 -0.61 \ ATOM 115 CG LEU A 501 18.175 26.420 -3.539 1.00 -0.61 \ ATOM 116 CD1 LEU A 501 17.730 27.632 -4.350 1.00 -0.61 \ ATOM 117 CD2 LEU A 501 19.421 26.736 -2.725 1.00 -0.61 \ ATOM 118 N ASP A 502 16.196 23.141 -4.010 1.00 -0.06 \ ATOM 119 CA ASP A 502 16.555 22.108 -4.976 1.00 -0.06 \ ATOM 120 C ASP A 502 15.484 21.944 -6.047 1.00 -0.06 \ ATOM 121 O ASP A 502 15.800 21.601 -7.192 1.00 -0.06 \ ATOM 122 CB ASP A 502 16.818 20.778 -4.263 1.00 -0.06 \ ATOM 123 CG ASP A 502 15.650 20.327 -3.405 1.00 -0.06 \ ATOM 124 OD1 ASP A 502 14.671 21.088 -3.277 1.00 -0.06 \ ATOM 125 OD2 ASP A 502 15.715 19.208 -2.853 1.00 -0.06 \ ATOM 126 N ASN A 503 14.219 22.192 -5.703 1.00 -0.04 \ ATOM 127 CA ASN A 503 13.162 22.136 -6.705 1.00 -0.04 \ ATOM 128 C ASN A 503 13.188 23.349 -7.626 1.00 -0.04 \ ATOM 129 O ASN A 503 12.844 23.231 -8.808 1.00 -0.04 \ ATOM 130 CB ASN A 503 11.798 22.012 -6.026 1.00 -0.04 \ ATOM 131 CG ASN A 503 11.558 20.627 -5.460 1.00 -0.04 \ ATOM 132 OD1 ASN A 503 12.118 19.642 -5.942 1.00 -0.04 \ ATOM 133 ND2 ASN A 503 10.721 20.544 -4.432 1.00 -0.04 \ ATOM 134 N LEU A 504 13.588 24.514 -7.111 1.00 0.55 \ ATOM 135 CA LEU A 504 13.780 25.671 -7.978 1.00 0.55 \ ATOM 136 C LEU A 504 14.922 25.433 -8.956 1.00 0.55 \ ATOM 137 O LEU A 504 14.826 25.790 -10.137 1.00 0.55 \ ATOM 138 CB LEU A 504 14.045 26.922 -7.139 1.00 0.55 \ ATOM 139 CG LEU A 504 14.520 28.149 -7.921 1.00 0.55 \ ATOM 140 CD1 LEU A 504 13.472 28.569 -8.939 1.00 0.55 \ ATOM 141 CD2 LEU A 504 14.860 29.300 -6.986 1.00 0.55 \ ATOM 142 N LYS A 505 16.013 24.827 -8.481 1.00 -0.05 \ ATOM 143 CA LYS A 505 17.133 24.512 -9.361 1.00 -0.05 \ ATOM 144 C LYS A 505 16.706 23.571 -10.481 1.00 -0.05 \ ATOM 145 O LYS A 505 17.073 23.773 -11.644 1.00 -0.05 \ ATOM 146 CB LYS A 505 18.276 23.902 -8.551 1.00 -0.05 \ ATOM 147 CG LYS A 505 19.540 23.630 -9.349 1.00 -0.05 \ ATOM 148 CD LYS A 505 20.645 23.094 -8.453 1.00 -0.05 \ ATOM 149 CE LYS A 505 21.932 22.871 -9.228 1.00 -0.05 \ ATOM 150 NZ LYS A 505 23.023 22.365 -8.351 1.00 -0.05 \ ATOM 151 N ALA A 506 15.922 22.541 -10.152 1.00 -1.00 \ ATOM 152 CA ALA A 506 15.431 21.635 -11.183 1.00 -1.00 \ ATOM 153 C ALA A 506 14.444 22.328 -12.113 1.00 -1.00 \ ATOM 154 O ALA A 506 14.370 21.989 -13.299 1.00 -1.00 \ ATOM 155 CB ALA A 506 14.787 20.405 -10.543 1.00 -1.00 \ ATOM 156 N HIS A 507 13.684 23.297 -11.597 1.00 1.39 \ ATOM 157 CA HIS A 507 12.749 24.033 -12.442 1.00 1.39 \ ATOM 158 C HIS A 507 13.484 24.895 -13.461 1.00 1.39 \ ATOM 159 O HIS A 507 13.032 25.037 -14.602 1.00 1.39 \ ATOM 160 CB HIS A 507 11.830 24.897 -11.580 1.00 1.39 \ ATOM 161 CG HIS A 507 11.116 25.968 -12.344 1.00 1.39 \ ATOM 162 ND1 HIS A 507 9.951 25.734 -13.043 1.00 1.39 \ ATOM 163 CD2 HIS A 507 11.403 27.280 -12.522 1.00 1.39 \ ATOM 164 CE1 HIS A 507 9.550 26.855 -13.616 1.00 1.39 \ ATOM 165 NE2 HIS A 507 10.414 27.808 -13.316 1.00 1.39 \ ATOM 166 N LEU A 508 14.619 25.478 -13.067 1.00 -0.57 \ ATOM 167 CA LEU A 508 15.366 26.337 -13.977 1.00 -0.57 \ ATOM 168 C LEU A 508 15.970 25.564 -15.141 1.00 -0.57 \ ATOM 169 O LEU A 508 16.333 26.177 -16.151 1.00 -0.57 \ ATOM 170 CB LEU A 508 16.459 27.084 -13.212 1.00 -0.57 \ ATOM 171 CG LEU A 508 15.979 28.335 -12.472 1.00 -0.57 \ ATOM 172 CD1 LEU A 508 16.987 28.763 -11.420 1.00 -0.57 \ ATOM 173 CD2 LEU A 508 15.711 29.467 -13.452 1.00 -0.57 \ ATOM 174 N LYS A 509 16.087 24.238 -15.026 1.00 -0.56 \ ATOM 175 CA LYS A 509 16.517 23.435 -16.167 1.00 -0.56 \ ATOM 176 C LYS A 509 15.512 23.508 -17.308 1.00 -0.56 \ ATOM 177 O LYS A 509 15.891 23.385 -18.478 1.00 -0.56 \ ATOM 178 CB LYS A 509 16.728 21.981 -15.743 1.00 -0.56 \ ATOM 179 CG LYS A 509 18.157 21.638 -15.353 1.00 -0.56 \ ATOM 180 CD LYS A 509 18.491 22.137 -13.960 1.00 -0.56 \ ATOM 181 N ILE A 510 14.231 23.708 -16.988 1.00 -0.07 \ ATOM 182 CA ILE A 510 13.207 23.817 -18.025 1.00 -0.07 \ ATOM 183 C ILE A 510 13.448 25.052 -18.882 1.00 -0.07 \ ATOM 184 O ILE A 510 13.237 25.032 -20.101 1.00 -0.07 \ ATOM 185 CB ILE A 510 11.806 23.831 -17.386 1.00 -0.07 \ ATOM 186 CG1 ILE A 510 11.594 22.573 -16.542 1.00 -0.07 \ ATOM 187 CG2 ILE A 510 10.727 23.948 -18.452 1.00 -0.07 \ ATOM 188 CD1 ILE A 510 10.316 22.591 -15.736 1.00 -0.07 \ ATOM 189 N HIS A 511 13.902 26.144 -18.263 1.00 1.39 \ ATOM 190 CA HIS A 511 14.187 27.357 -19.022 1.00 1.39 \ ATOM 191 C HIS A 511 15.446 27.200 -19.864 1.00 1.39 \ ATOM 192 O HIS A 511 15.497 27.668 -21.007 1.00 1.39 \ ATOM 193 CB HIS A 511 14.319 28.551 -18.077 1.00 1.39 \ ATOM 194 CG HIS A 511 13.061 28.876 -17.334 1.00 1.39 \ ATOM 195 ND1 HIS A 511 11.897 29.254 -17.970 1.00 1.39 \ ATOM 196 CD2 HIS A 511 12.784 28.883 -16.009 1.00 1.39 \ ATOM 197 CE1 HIS A 511 10.958 29.478 -17.069 1.00 1.39 \ ATOM 198 NE2 HIS A 511 11.470 29.260 -15.870 1.00 1.39 \ ATOM 199 N SER A 512 16.475 26.548 -19.315 1.00 0.39 \ ATOM 200 CA SER A 512 17.703 26.335 -20.075 1.00 0.39 \ ATOM 201 C SER A 512 17.461 25.418 -21.266 1.00 0.39 \ ATOM 202 O SER A 512 18.002 25.649 -22.354 1.00 0.39 \ ATOM 203 CB SER A 512 18.791 25.762 -19.167 1.00 0.39 \ ATOM 204 OG SER A 512 18.403 24.507 -18.637 1.00 0.39 \ ATOM 205 N LYS A 513 16.649 24.374 -21.082 1.00 0.53 \ ATOM 206 CA LYS A 513 16.313 23.497 -22.198 1.00 0.53 \ ATOM 207 C LYS A 513 15.423 24.201 -23.213 1.00 0.53 \ ATOM 208 O LYS A 513 15.435 23.846 -24.397 1.00 0.53 \ ATOM 209 CB LYS A 513 15.633 22.228 -21.683 1.00 0.53 \ ATOM 210 N GLU A 514 14.648 25.196 -22.774 1.00 -1.00 \ ATOM 211 CA GLU A 514 13.795 25.933 -23.699 1.00 -1.00 \ ATOM 212 C GLU A 514 14.611 26.822 -24.629 1.00 -1.00 \ ATOM 213 O GLU A 514 14.161 27.135 -25.737 1.00 -1.00 \ ATOM 214 CB GLU A 514 12.777 26.770 -22.923 1.00 -1.00 \ ATOM 215 N LYS A 515 15.801 27.233 -24.203 1.00 -1.00 \ ATOM 216 CA LYS A 515 16.662 28.075 -25.025 1.00 -1.00 \ ATOM 217 C LYS A 515 17.662 27.229 -25.807 1.00 -1.00 \ ATOM 218 O LYS A 515 17.489 26.995 -27.004 1.00 -1.00 \ ATOM 219 CB LYS A 515 17.390 29.094 -24.162 1.00 -1.00 \ """, "e6ml6A4_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6ml6A4_csv", state=0, origin=1) cmd.zoom("e6ml6A4_csv", animate=-1)