cmd.read_pdbstr("""\ ATOM 1 CA ARG A 465 81.308 44.392 90.968 1.00 -1.00 \ ATOM 2 CA PRO A 466 82.201 40.699 90.954 1.00 -1.00 \ ATOM 3 CA GLY A 467 83.073 39.360 94.355 1.00 -1.00 \ ATOM 4 CA ARG A 468 79.857 40.891 95.689 1.00 -1.00 \ ATOM 5 CA PHE A 469 77.404 39.904 92.934 1.00 -1.00 \ ATOM 6 CA ASP A 470 79.250 37.636 90.517 1.00 -1.00 \ ATOM 7 CA ARG A 471 76.281 37.319 88.162 1.00 -1.00 \ ATOM 8 CA GLN A 472 73.672 39.821 87.020 1.00 -1.00 \ ATOM 9 CA ILE A 473 70.746 37.841 85.644 1.00 -1.00 \ ATOM 10 CA PHE A 474 68.201 39.751 83.571 1.00 -1.00 \ ATOM 11 CA ILE A 475 64.818 38.020 83.675 1.00 -1.00 \ ATOM 12 CA GLY A 476 63.049 39.599 80.712 1.00 -1.00 \ ATOM 13 CA PRO A 477 59.341 39.286 79.802 1.00 -1.00 \ ATOM 14 CA PRO A 478 58.025 35.767 78.882 1.00 5.66 \ ATOM 15 CA ASP A 479 57.204 34.340 75.435 1.00 0.53 \ ATOM 16 CA ILE A 480 53.893 32.973 74.134 1.00 -0.70 \ ATOM 17 CA LYS A 481 54.668 29.622 75.740 1.00 -0.63 \ ATOM 18 CA GLY A 482 55.355 31.575 78.915 1.00 0.15 \ ATOM 19 CA ARG A 483 52.130 33.565 78.793 1.00 1.54 \ ATOM 20 CA ALA A 484 50.093 30.429 78.104 1.00 -0.65 \ ATOM 21 CA SER A 485 51.324 29.019 81.413 1.00 -0.35 \ ATOM 22 CA ILE A 486 50.656 32.280 83.244 1.00 1.44 \ ATOM 23 CA PHE A 487 47.034 32.003 82.087 1.00 1.64 \ ATOM 24 CA LYS A 488 46.940 28.452 83.492 1.00 -0.38 \ ATOM 25 CA VAL A 489 47.801 29.850 86.926 1.00 -0.18 \ ATOM 26 CA HIS A 490 45.170 32.599 86.855 1.00 -0.38 \ ATOM 27 CA LEU A 491 42.340 30.893 84.971 1.00 0.17 \ ATOM 28 CA ARG A 492 42.404 28.407 87.842 1.00 -0.28 \ ATOM 29 CA PRO A 493 40.271 30.316 90.429 1.00 -0.38 \ ATOM 30 CA LEU A 494 37.706 31.514 87.858 1.00 -0.24 \ ATOM 31 CA LYS A 495 34.423 29.860 86.846 1.00 -0.56 \ ATOM 32 CA LEU A 496 34.137 29.086 83.146 1.00 -1.00 \ ATOM 33 CA ASP A 497 31.243 27.514 81.226 1.00 -1.00 \ ATOM 34 CA SER A 498 30.253 23.887 80.860 1.00 -1.00 \ ATOM 35 CA THR A 499 32.455 24.256 77.785 1.00 -1.00 \ ATOM 36 CA LEU A 500 35.772 26.236 77.840 1.00 -0.52 \ ATOM 37 CA GLU A 501 38.277 23.906 79.437 1.00 -0.47 \ ATOM 38 CA LYS A 502 40.900 25.915 81.343 1.00 -0.53 \ ATOM 39 CA ASP A 503 43.753 24.317 79.372 1.00 -0.23 \ ATOM 40 CA LYS A 504 42.660 25.047 75.796 1.00 -0.39 \ ATOM 41 CA LEU A 505 41.542 28.561 76.712 1.00 -0.59 \ ATOM 42 CA ALA A 506 44.990 29.502 78.033 1.00 -0.49 \ ATOM 43 CA ARG A 507 46.425 28.717 74.604 1.00 -0.77 \ ATOM 44 CA LYS A 508 43.768 30.907 72.982 1.00 -0.77 \ ATOM 45 CA LEU A 509 44.287 33.766 75.415 1.00 0.99 \ ATOM 46 CA ALA A 510 48.056 33.905 74.995 1.00 0.65 \ ATOM 47 CA SER A 511 47.497 34.232 71.246 1.00 -0.66 \ ATOM 48 CA LEU A 512 45.315 37.311 71.664 1.00 -0.74 \ ATOM 49 CA THR A 513 47.836 38.957 74.036 1.00 -0.11 \ ATOM 50 CA PRO A 514 51.194 39.585 72.327 1.00 -0.67 \ ATOM 51 CA GLY A 515 53.864 41.436 74.224 1.00 -0.48 \ ATOM 52 CA PHE A 516 52.133 41.323 77.593 1.00 -0.17 \ ATOM 53 CA SER A 517 53.910 40.562 80.841 1.00 0.71 \ ATOM 54 CA GLY A 518 53.372 38.487 83.955 1.00 2.00 \ ATOM 55 CA ALA A 519 50.928 41.024 85.389 1.00 2.06 \ ATOM 56 CA ASP A 520 49.095 42.080 82.227 1.00 0.12 \ ATOM 57 CA VAL A 521 47.828 38.497 82.041 1.00 1.32 \ ATOM 58 CA ALA A 522 46.652 38.870 85.648 1.00 -0.50 \ ATOM 59 CA ASN A 523 44.200 41.653 84.744 1.00 -0.50 \ ATOM 60 CA VAL A 524 42.826 39.888 81.656 1.00 0.92 \ ATOM 61 CA CYS A 525 41.915 36.948 83.872 1.00 0.37 \ ATOM 62 N ASN A 526 41.397 38.665 85.525 1.00 -0.49 \ ATOM 63 CA ASN A 526 40.582 39.270 86.570 1.00 -0.49 \ ATOM 64 C ASN A 526 39.447 40.088 85.980 1.00 -0.49 \ ATOM 65 O ASN A 526 38.283 39.884 86.333 1.00 -0.49 \ ATOM 66 CB ASN A 526 41.435 40.155 87.469 1.00 -0.49 \ ATOM 67 CG ASN A 526 40.733 40.531 88.748 1.00 -0.49 \ ATOM 68 OD1 ASN A 526 39.640 40.055 89.035 1.00 -0.49 \ ATOM 69 ND2 ASN A 526 41.350 41.413 89.517 1.00 -0.49 \ ATOM 70 N GLU A 527 39.763 41.019 85.081 1.00 -0.39 \ ATOM 71 CA GLU A 527 38.743 41.941 84.605 1.00 -0.39 \ ATOM 72 C GLU A 527 37.772 41.307 83.625 1.00 -0.39 \ ATOM 73 O GLU A 527 36.787 41.953 83.266 1.00 -0.39 \ ATOM 74 CB GLU A 527 39.384 43.168 83.968 1.00 -0.39 \ ATOM 75 CG GLU A 527 40.128 44.026 84.965 1.00 -0.39 \ ATOM 76 CD GLU A 527 40.727 45.260 84.337 1.00 -0.39 \ ATOM 77 OE1 GLU A 527 40.643 45.397 83.099 1.00 -0.39 \ ATOM 78 OE2 GLU A 527 41.290 46.089 85.081 1.00 -0.39 \ ATOM 79 N ALA A 528 38.007 40.075 83.192 1.00 1.98 \ ATOM 80 CA ALA A 528 36.966 39.360 82.479 1.00 1.98 \ ATOM 81 C ALA A 528 35.921 38.796 83.414 1.00 1.98 \ ATOM 82 O ALA A 528 34.808 38.504 82.972 1.00 1.98 \ ATOM 83 CB ALA A 528 37.561 38.227 81.666 1.00 1.98 \ ATOM 84 N ALA A 529 36.258 38.612 84.686 1.00 -0.12 \ ATOM 85 CA ALA A 529 35.258 38.218 85.665 1.00 -0.12 \ ATOM 86 C ALA A 529 34.420 39.404 86.103 1.00 -0.12 \ ATOM 87 O ALA A 529 33.227 39.253 86.382 1.00 -0.12 \ ATOM 88 CB ALA A 529 35.933 37.571 86.867 1.00 -0.12 \ ATOM 89 N LEU A 530 35.022 40.590 86.147 1.00 -0.46 \ ATOM 90 CA LEU A 530 34.294 41.793 86.506 1.00 -0.46 \ ATOM 91 C LEU A 530 33.392 42.277 85.386 1.00 -0.46 \ ATOM 92 O LEU A 530 32.469 43.051 85.644 1.00 -0.46 \ ATOM 93 CB LEU A 530 35.279 42.884 86.893 1.00 -0.46 \ ATOM 94 CG LEU A 530 36.116 42.477 88.095 1.00 -0.46 \ ATOM 95 CD1 LEU A 530 37.191 43.476 88.331 1.00 -0.46 \ ATOM 96 CD2 LEU A 530 35.261 42.338 89.322 1.00 -0.46 \ ATOM 97 N ILE A 531 33.642 41.848 84.151 1.00 -0.73 \ ATOM 98 CA ILE A 531 32.694 42.094 83.072 1.00 -0.73 \ ATOM 99 C ILE A 531 31.618 41.016 83.060 1.00 -0.73 \ ATOM 100 O ILE A 531 30.443 41.295 82.795 1.00 -0.73 \ ATOM 101 CB ILE A 531 33.446 42.188 81.733 1.00 -0.73 \ ATOM 102 CG1 ILE A 531 34.348 43.412 81.735 1.00 -0.73 \ ATOM 103 CG2 ILE A 531 32.502 42.289 80.560 1.00 -0.73 \ ATOM 104 CD1 ILE A 531 35.295 43.452 80.576 1.00 -0.73 \ ATOM 105 N ALA A 532 32.000 39.779 83.392 1.00 -0.08 \ ATOM 106 CA ALA A 532 31.042 38.684 83.472 1.00 -0.08 \ ATOM 107 C ALA A 532 30.031 38.897 84.581 1.00 -0.08 \ ATOM 108 O ALA A 532 28.877 38.477 84.459 1.00 -0.08 \ ATOM 109 CB ALA A 532 31.770 37.365 83.705 1.00 -0.08 \ ATOM 110 N ALA A 533 30.435 39.539 85.663 1.00 0.13 \ ATOM 111 CA ALA A 533 29.526 39.766 86.767 1.00 0.13 \ ATOM 112 C ALA A 533 28.881 41.140 86.735 1.00 0.13 \ ATOM 113 O ALA A 533 27.976 41.397 87.531 1.00 0.13 \ ATOM 114 CB ALA A 533 30.260 39.565 88.087 1.00 0.13 \ ATOM 115 N ARG A 534 29.333 42.032 85.855 1.00 -0.45 \ ATOM 116 CA ARG A 534 28.611 43.278 85.647 1.00 -0.45 \ ATOM 117 C ARG A 534 27.308 43.022 84.909 1.00 -0.45 \ ATOM 118 O ARG A 534 26.278 43.623 85.228 1.00 -0.45 \ ATOM 119 CB ARG A 534 29.483 44.276 84.887 1.00 -0.45 \ ATOM 120 CG ARG A 534 28.845 45.631 84.730 1.00 -0.45 \ ATOM 121 CD ARG A 534 29.766 46.680 84.132 1.00 -0.45 \ ATOM 122 NE ARG A 534 30.188 46.388 82.768 1.00 -0.45 \ ATOM 123 CZ ARG A 534 31.456 46.274 82.394 1.00 -0.45 \ ATOM 124 NH1 ARG A 534 32.426 46.441 83.281 1.00 -0.45 \ ATOM 125 NH2 ARG A 534 31.755 46.010 81.129 1.00 -0.45 \ ATOM 126 N HIS A 535 27.323 42.111 83.941 1.00 -0.57 \ ATOM 127 CA HIS A 535 26.104 41.739 83.239 1.00 -0.57 \ ATOM 128 C HIS A 535 25.296 40.683 83.973 1.00 -0.57 \ ATOM 129 O HIS A 535 24.267 40.254 83.440 1.00 -0.57 \ ATOM 130 CB HIS A 535 26.433 41.236 81.834 1.00 -0.57 \ ATOM 131 CG HIS A 535 27.054 42.274 80.956 1.00 -0.57 \ ATOM 132 ND1 HIS A 535 28.415 42.465 80.881 1.00 -0.57 \ ATOM 133 CD2 HIS A 535 26.498 43.190 80.130 1.00 -0.57 \ ATOM 134 CE1 HIS A 535 28.674 43.446 80.036 1.00 -0.57 \ ATOM 135 NE2 HIS A 535 27.527 43.904 79.566 1.00 -0.57 \ ATOM 136 N LEU A 536 25.744 40.268 85.163 1.00 -0.67 \ ATOM 137 CA LEU A 536 25.095 39.276 86.023 1.00 -0.67 \ ATOM 138 C LEU A 536 24.913 37.953 85.271 1.00 -0.67 \ ATOM 139 O LEU A 536 23.809 37.517 84.944 1.00 -0.67 \ ATOM 140 CB LEU A 536 23.773 39.820 86.583 1.00 -0.67 \ ATOM 141 CG LEU A 536 23.038 39.059 87.688 1.00 -0.67 \ ATOM 142 CD1 LEU A 536 23.900 38.972 88.923 1.00 -0.67 \ ATOM 143 CD2 LEU A 536 21.718 39.731 88.007 1.00 -0.67 \ ATOM 144 N SER A 537 26.053 37.357 84.953 1.00 -0.68 \ ATOM 145 CA SER A 537 26.102 36.092 84.244 1.00 -0.68 \ ATOM 146 C SER A 537 26.605 34.998 85.174 1.00 -0.68 \ ATOM 147 O SER A 537 27.232 35.263 86.202 1.00 -0.68 \ ATOM 148 CB SER A 537 26.990 36.192 83.006 1.00 -0.68 \ ATOM 149 OG SER A 537 28.330 36.449 83.376 1.00 -0.68 \ ATOM 150 N ASP A 538 26.317 33.755 84.799 1.00 -0.66 \ ATOM 151 CA ASP A 538 26.631 32.615 85.646 1.00 -0.66 \ ATOM 152 C ASP A 538 28.058 32.123 85.480 1.00 -0.66 \ ATOM 153 O ASP A 538 28.654 31.644 86.450 1.00 -0.66 \ ATOM 154 CB ASP A 538 25.667 31.465 85.353 1.00 -0.66 \ ATOM 155 CG ASP A 538 24.258 31.762 85.807 1.00 -0.66 \ ATOM 156 OD1 ASP A 538 24.100 32.515 86.789 1.00 -0.66 \ ATOM 157 OD2 ASP A 538 23.308 31.245 85.184 1.00 -0.66 \ ATOM 158 N SER A 539 28.619 32.218 84.278 1.00 -0.78 \ ATOM 159 CA SER A 539 29.960 31.722 84.029 1.00 -0.78 \ ATOM 160 C SER A 539 30.610 32.576 82.954 1.00 -0.78 \ ATOM 161 O SER A 539 29.931 33.127 82.086 1.00 -0.78 \ ATOM 162 CB SER A 539 29.940 30.253 83.613 1.00 -0.78 \ ATOM 163 OG SER A 539 29.459 29.428 84.659 1.00 -0.78 \ ATOM 164 N ILE A 540 31.934 32.664 83.014 1.00 0.03 \ ATOM 165 CA ILE A 540 32.689 33.589 82.178 1.00 0.03 \ ATOM 166 C ILE A 540 32.815 33.008 80.774 1.00 0.03 \ ATOM 167 O ILE A 540 33.453 31.969 80.577 1.00 0.03 \ ATOM 168 CB ILE A 540 34.067 33.869 82.784 1.00 0.03 \ ATOM 169 CG1 ILE A 540 33.920 34.398 84.204 1.00 0.03 \ ATOM 170 CG2 ILE A 540 34.786 34.897 81.975 1.00 0.03 \ ATOM 171 CD1 ILE A 540 35.206 34.436 84.958 1.00 0.03 \ ATOM 172 N ASN A 541 32.215 33.680 79.795 1.00 -0.79 \ ATOM 173 CA ASN A 541 32.278 33.246 78.409 1.00 -0.79 \ ATOM 174 C ASN A 541 33.629 33.604 77.803 1.00 -0.79 \ ATOM 175 O ASN A 541 34.472 34.243 78.433 1.00 -0.79 \ ATOM 176 CB ASN A 541 31.159 33.890 77.598 1.00 -0.79 \ ATOM 177 CG ASN A 541 29.791 33.429 78.027 1.00 -0.79 \ ATOM 178 OD1 ASN A 541 29.575 32.250 78.290 1.00 -0.79 \ ATOM 179 ND2 ASN A 541 28.852 34.362 78.101 1.00 -0.79 \ ATOM 180 N GLN A 542 33.839 33.200 76.548 1.00 -0.75 \ ATOM 181 CA GLN A 542 35.024 33.663 75.836 1.00 -0.75 \ ATOM 182 C GLN A 542 34.883 35.123 75.437 1.00 -0.75 \ ATOM 183 O GLN A 542 35.878 35.856 75.403 1.00 -0.75 \ ATOM 184 CB GLN A 542 35.287 32.791 74.610 1.00 -0.75 \ ATOM 185 CG GLN A 542 36.589 33.103 73.889 1.00 -0.75 \ ATOM 186 CD GLN A 542 36.866 32.156 72.751 1.00 -0.75 \ ATOM 187 OE1 GLN A 542 36.079 31.252 72.475 1.00 -0.75 \ ATOM 188 NE2 GLN A 542 37.989 32.357 72.075 1.00 -0.75 \ """, "e6nyyA3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6nyyA3_csv", state=0, origin=1) cmd.zoom("e6nyyA3_csv", animate=-1)