cmd.read_pdbstr("""\ ATOM 4 N ARG A 1 6.012 9.584 -41.195 1.00 0.18 \ ATOM 5 CA ARG A 1 5.045 10.057 -40.204 1.00 0.18 \ ATOM 6 C ARG A 1 4.107 8.981 -39.669 1.00 0.18 \ ATOM 7 O ARG A 1 3.646 9.091 -38.528 1.00 0.18 \ ATOM 8 CB ARG A 1 4.236 11.227 -40.762 1.00 0.18 \ ATOM 9 CG ARG A 1 3.690 12.111 -39.657 1.00 0.18 \ ATOM 10 CD ARG A 1 3.320 13.480 -40.163 1.00 0.18 \ ATOM 11 NE ARG A 1 2.272 13.429 -41.182 1.00 0.18 \ ATOM 12 CZ ARG A 1 0.970 13.288 -40.924 1.00 0.18 \ ATOM 13 NH1 ARG A 1 0.542 13.168 -39.668 1.00 0.18 \ ATOM 14 NH2 ARG A 1 0.093 13.264 -41.922 1.00 0.18 \ ATOM 15 N MET A 2 3.817 7.948 -40.454 1.00 0.18 \ ATOM 16 CA MET A 2 3.264 6.753 -39.839 1.00 0.18 \ ATOM 17 C MET A 2 4.143 6.280 -38.695 1.00 0.18 \ ATOM 18 O MET A 2 3.650 5.979 -37.606 1.00 0.18 \ ATOM 19 CB MET A 2 3.168 5.597 -40.816 1.00 0.18 \ ATOM 20 CG MET A 2 2.054 4.658 -40.402 1.00 0.18 \ ATOM 21 SD MET A 2 0.396 5.350 -40.748 1.00 0.18 \ ATOM 22 CE MET A 2 0.879 6.177 -42.243 1.00 0.18 \ ATOM 23 N LYS A 3 5.443 6.132 -38.967 1.00 0.18 \ ATOM 24 CA LYS A 3 6.358 5.594 -37.977 1.00 0.18 \ ATOM 25 C LYS A 3 6.479 6.532 -36.797 1.00 0.18 \ ATOM 26 O LYS A 3 6.611 6.073 -35.663 1.00 0.18 \ ATOM 27 CB LYS A 3 7.714 5.338 -38.622 1.00 0.18 \ ATOM 28 CG LYS A 3 7.951 3.871 -38.996 1.00 0.18 \ ATOM 29 CD LYS A 3 8.552 3.737 -40.396 1.00 0.18 \ ATOM 30 CE LYS A 3 8.606 2.273 -40.836 1.00 0.18 \ ATOM 31 NZ LYS A 3 9.296 2.141 -42.148 1.00 0.18 \ ATOM 32 N GLN A 4 6.466 7.848 -37.037 1.00 0.18 \ ATOM 33 CA GLN A 4 6.577 8.775 -35.920 1.00 0.18 \ ATOM 34 C GLN A 4 5.357 8.689 -35.016 1.00 0.18 \ ATOM 35 O GLN A 4 5.494 8.697 -33.792 1.00 0.18 \ ATOM 36 CB GLN A 4 6.780 10.201 -36.409 1.00 0.18 \ ATOM 37 CG GLN A 4 8.215 10.433 -36.869 1.00 0.18 \ ATOM 38 CD GLN A 4 8.509 11.875 -37.188 1.00 0.18 \ ATOM 39 OE1 GLN A 4 7.933 12.442 -38.118 1.00 0.18 \ ATOM 40 NE2 GLN A 4 9.440 12.472 -36.442 1.00 0.18 \ ATOM 41 N LEU A 5 4.161 8.576 -35.604 1.00 0.18 \ ATOM 42 CA LEU A 5 2.961 8.407 -34.789 1.00 0.18 \ ATOM 43 C LEU A 5 2.990 7.089 -34.023 1.00 0.18 \ ATOM 44 O LEU A 5 2.627 7.047 -32.844 1.00 0.18 \ ATOM 45 CB LEU A 5 1.706 8.488 -35.662 1.00 0.18 \ ATOM 46 CG LEU A 5 1.261 9.908 -36.069 1.00 0.18 \ ATOM 47 CD1 LEU A 5 0.159 9.885 -37.132 1.00 0.18 \ ATOM 48 CD2 LEU A 5 0.805 10.696 -34.852 1.00 0.18 \ ATOM 49 N GLU A 6 3.385 5.995 -34.685 1.00 0.18 \ ATOM 50 CA GLU A 6 3.517 4.720 -33.974 1.00 0.18 \ ATOM 51 C GLU A 6 4.522 4.822 -32.832 1.00 0.18 \ ATOM 52 O GLU A 6 4.289 4.295 -31.738 1.00 0.18 \ ATOM 53 CB GLU A 6 3.938 3.615 -34.953 1.00 0.18 \ ATOM 54 CG GLU A 6 2.833 3.174 -35.917 1.00 0.18 \ ATOM 55 CD GLU A 6 3.355 2.408 -37.140 1.00 0.18 \ ATOM 56 OE1 GLU A 6 4.585 2.223 -37.300 1.00 0.18 \ ATOM 57 OE2 GLU A 6 2.515 1.974 -37.943 1.00 0.18 \ ATOM 58 N ASP A 7 5.661 5.465 -33.082 1.00 0.18 \ ATOM 59 CA ASP A 7 6.657 5.660 -32.034 1.00 0.18 \ ATOM 60 C ASP A 7 6.072 6.415 -30.845 1.00 0.18 \ ATOM 61 O ASP A 7 6.367 6.093 -29.685 1.00 0.18 \ ATOM 62 CB ASP A 7 7.860 6.425 -32.591 1.00 0.18 \ ATOM 63 CG ASP A 7 8.715 5.599 -33.533 1.00 0.18 \ ATOM 64 OD1 ASP A 7 8.608 4.357 -33.539 1.00 0.18 \ ATOM 65 OD2 ASP A 7 9.532 6.207 -34.249 1.00 0.18 \ ATOM 66 N LYS A 8 5.260 7.437 -31.113 1.00 0.18 \ ATOM 67 CA LYS A 8 4.668 8.220 -30.028 1.00 0.18 \ ATOM 68 C LYS A 8 3.669 7.396 -29.221 1.00 0.18 \ ATOM 69 O LYS A 8 3.593 7.538 -27.996 1.00 0.18 \ ATOM 70 CB LYS A 8 4.000 9.478 -30.585 1.00 0.18 \ ATOM 71 CG LYS A 8 3.443 10.442 -29.504 1.00 0.18 \ ATOM 72 CD LYS A 8 4.542 10.956 -28.567 1.00 0.18 \ ATOM 73 CE LYS A 8 5.577 11.783 -29.339 1.00 0.18 \ ATOM 74 NZ LYS A 8 6.867 11.964 -28.591 1.00 0.18 \ ATOM 75 N VAL A 9 2.876 6.551 -29.887 1.00 0.18 \ ATOM 76 CA VAL A 9 1.975 5.656 -29.161 1.00 0.18 \ ATOM 77 C VAL A 9 2.766 4.743 -28.229 1.00 0.18 \ ATOM 78 O VAL A 9 2.451 4.617 -27.041 1.00 0.18 \ ATOM 79 CB VAL A 9 1.111 4.842 -30.146 1.00 0.18 \ ATOM 80 CG1 VAL A 9 0.422 3.698 -29.420 1.00 0.18 \ ATOM 81 CG2 VAL A 9 0.087 5.730 -30.822 1.00 0.18 \ ATOM 82 N GLU A 10 3.799 4.081 -28.758 1.00 0.18 \ ATOM 83 CA GLU A 10 4.632 3.207 -27.926 1.00 0.18 \ ATOM 84 C GLU A 10 5.274 3.970 -26.772 1.00 0.18 \ ATOM 85 O GLU A 10 5.380 3.449 -25.655 1.00 0.18 \ ATOM 86 CB GLU A 10 5.716 2.547 -28.775 1.00 0.18 \ ATOM 87 CG GLU A 10 5.183 1.635 -29.873 1.00 0.18 \ ATOM 88 CD GLU A 10 6.187 1.439 -30.992 1.00 0.18 \ ATOM 89 OE1 GLU A 10 7.276 2.047 -30.929 1.00 0.18 \ ATOM 90 OE2 GLU A 10 5.892 0.679 -31.937 1.00 0.18 \ ATOM 91 N GLU A 11 5.726 5.200 -27.025 1.00 0.18 \ ATOM 92 CA GLU A 11 6.330 5.982 -25.949 1.00 0.18 \ ATOM 93 C GLU A 11 5.309 6.334 -24.865 1.00 0.18 \ ATOM 94 O GLU A 11 5.586 6.183 -23.665 1.00 0.18 \ ATOM 95 CB GLU A 11 6.981 7.237 -26.525 1.00 0.18 \ ATOM 96 CG GLU A 11 7.770 8.015 -25.503 1.00 0.18 \ ATOM 97 CD GLU A 11 8.206 9.376 -26.011 1.00 0.18 \ ATOM 98 OE1 GLU A 11 7.896 9.710 -27.182 1.00 0.18 \ ATOM 99 OE2 GLU A 11 8.877 10.100 -25.240 1.00 0.18 \ ATOM 100 N LEU A 12 4.118 6.793 -25.264 1.00 0.18 \ ATOM 101 CA LEU A 12 3.091 7.149 -24.288 1.00 0.18 \ ATOM 102 C LEU A 12 2.592 5.937 -23.521 1.00 0.18 \ ATOM 103 O LEU A 12 2.184 6.077 -22.370 1.00 0.18 \ ATOM 104 CB LEU A 12 1.910 7.849 -24.964 1.00 0.18 \ ATOM 105 CG LEU A 12 2.140 9.343 -25.252 1.00 0.18 \ ATOM 106 CD1 LEU A 12 1.319 9.805 -26.410 1.00 0.18 \ ATOM 107 CD2 LEU A 12 1.845 10.187 -24.024 1.00 0.18 \ ATOM 108 N LEU A 13 2.587 4.751 -24.133 1.00 0.18 \ ATOM 109 CA LEU A 13 2.151 3.569 -23.392 1.00 0.18 \ ATOM 110 C LEU A 13 3.168 3.190 -22.318 1.00 0.18 \ ATOM 111 O LEU A 13 2.794 2.818 -21.198 1.00 0.18 \ ATOM 112 CB LEU A 13 1.914 2.405 -24.354 1.00 0.18 \ ATOM 113 CG LEU A 13 1.499 1.063 -23.746 1.00 0.18 \ ATOM 114 CD1 LEU A 13 0.075 1.159 -23.250 1.00 0.18 \ ATOM 115 CD2 LEU A 13 1.631 -0.057 -24.791 1.00 0.18 \ ATOM 116 N SER A 14 4.459 3.308 -22.637 1.00 0.18 \ ATOM 117 CA SER A 14 5.496 3.068 -21.645 1.00 0.18 \ ATOM 118 C SER A 14 5.375 4.049 -20.487 1.00 0.18 \ ATOM 119 O SER A 14 5.499 3.659 -19.322 1.00 0.18 \ ATOM 120 CB SER A 14 6.875 3.165 -22.297 1.00 0.18 \ ATOM 121 OG SER A 14 7.908 3.044 -21.332 1.00 0.18 \ ATOM 122 N LYS A 15 5.104 5.323 -20.791 1.00 0.18 \ ATOM 123 CA LYS A 15 4.930 6.316 -19.735 1.00 0.18 \ ATOM 124 C LYS A 15 3.722 5.980 -18.857 1.00 0.18 \ ATOM 125 O LYS A 15 3.790 6.103 -17.626 1.00 0.18 \ ATOM 126 CB LYS A 15 4.787 7.707 -20.357 1.00 0.18 \ ATOM 127 CG LYS A 15 6.014 8.186 -21.148 1.00 0.18 \ ATOM 128 CD LYS A 15 5.921 9.693 -21.466 1.00 0.18 \ ATOM 129 CE LYS A 15 7.183 10.225 -22.130 1.00 0.18 \ ATOM 130 NZ LYS A 15 6.950 11.522 -22.844 1.00 0.18 \ ATOM 131 N ASN A 16 2.616 5.591 -19.495 0.45 0.18 \ ATOM 132 CA ASN A 16 1.415 5.145 -18.790 0.45 0.18 \ ATOM 133 C ASN A 16 1.744 4.011 -17.829 0.45 0.18 \ ATOM 134 O ASN A 16 1.410 4.071 -16.641 0.45 0.18 \ ATOM 135 CB ASN A 16 0.365 4.717 -19.827 0.45 0.18 \ ATOM 136 CG ASN A 16 -1.004 4.403 -19.223 0.45 0.18 \ ATOM 137 OD1 ASN A 16 -1.910 5.240 -19.242 0.45 0.18 \ ATOM 138 ND2 ASN A 16 -1.179 3.174 -18.749 0.45 0.18 \ ATOM 139 N TYR A 17 2.444 2.986 -18.321 1.00 0.18 \ ATOM 140 CA TYR A 17 2.771 1.836 -17.491 1.00 0.18 \ ATOM 141 C TYR A 17 3.655 2.235 -16.307 1.00 0.18 \ ATOM 142 O TYR A 17 3.458 1.739 -15.195 1.00 0.18 \ ATOM 143 CB TYR A 17 3.413 0.739 -18.345 1.00 0.18 \ ATOM 144 CG TYR A 17 2.395 -0.056 -19.158 1.00 0.18 \ ATOM 145 CD1 TYR A 17 1.063 -0.096 -18.781 1.00 0.18 \ ATOM 146 CD2 TYR A 17 2.767 -0.754 -20.313 1.00 0.18 \ ATOM 147 CE1 TYR A 17 0.130 -0.804 -19.507 1.00 0.18 \ ATOM 148 CE2 TYR A 17 1.840 -1.464 -21.046 1.00 0.18 \ ATOM 149 CZ TYR A 17 0.517 -1.482 -20.636 1.00 0.18 \ ATOM 150 OH TYR A 17 -0.437 -2.170 -21.338 1.00 0.18 \ ATOM 151 N ASN A 18 4.600 3.162 -16.505 1.00 -5.39 \ ATOM 152 CA ASN A 18 5.376 3.656 -15.373 1.00 -5.39 \ ATOM 153 C ASN A 18 4.492 4.391 -14.378 1.00 -5.39 \ ATOM 154 O ASN A 18 4.651 4.232 -13.161 1.00 -5.39 \ ATOM 155 CB ASN A 18 6.507 4.565 -15.844 1.00 -5.39 \ ATOM 156 CG ASN A 18 7.639 3.795 -16.458 1.00 -5.39 \ ATOM 157 OD1 ASN A 18 7.742 2.578 -16.282 1.00 -5.39 \ ATOM 158 ND2 ASN A 18 8.505 4.495 -17.187 1.00 -5.39 \ ATOM 159 N LEU A 19 3.546 5.188 -14.874 1.00 0.18 \ ATOM 160 CA LEU A 19 2.624 5.879 -13.984 1.00 0.18 \ ATOM 161 C LEU A 19 1.722 4.893 -13.265 1.00 0.18 \ ATOM 162 O LEU A 19 1.410 5.074 -12.082 1.00 0.18 \ ATOM 163 CB LEU A 19 1.790 6.880 -14.772 1.00 0.18 \ ATOM 164 CG LEU A 19 2.560 8.082 -15.285 1.00 0.18 \ ATOM 165 CD1 LEU A 19 1.671 8.866 -16.217 1.00 0.18 \ ATOM 166 CD2 LEU A 19 3.005 8.930 -14.094 1.00 0.18 \ ATOM 167 N GLU A 20 1.274 3.849 -13.967 1.00 0.18 \ ATOM 168 CA GLU A 20 0.461 2.819 -13.330 0.56 0.18 \ ATOM 169 C GLU A 20 1.234 2.117 -12.237 1.00 0.18 \ ATOM 170 O GLU A 20 0.698 1.815 -11.159 1.00 0.18 \ ATOM 171 CB GLU A 20 -0.017 1.797 -14.366 0.56 0.18 \ ATOM 172 CG GLU A 20 -1.165 2.230 -15.255 0.56 0.18 \ ATOM 173 CD GLU A 20 -1.502 1.169 -16.306 0.56 0.18 \ ATOM 174 OE1 GLU A 20 -1.397 -0.042 -16.004 0.56 0.18 \ ATOM 175 OE2 GLU A 20 -1.849 1.540 -17.444 0.56 0.18 \ ATOM 176 N ASN A 21 2.528 1.831 -12.487 1.00 0.18 \ ATOM 177 CA ASN A 21 3.344 1.153 -11.490 1.00 0.18 \ ATOM 178 C ASN A 21 3.572 2.051 -10.285 1.00 0.18 \ ATOM 179 O ASN A 21 3.626 1.571 -9.148 1.00 0.18 \ ATOM 180 CB ASN A 21 4.686 0.716 -12.085 1.00 0.18 \ ATOM 181 CG ASN A 21 4.533 -0.310 -13.220 1.00 0.18 \ ATOM 182 OD1 ASN A 21 3.481 -0.934 -13.378 1.00 0.18 \ ATOM 183 ND2 ASN A 21 5.589 -0.476 -14.014 1.00 0.18 \ ATOM 184 N GLU A 22 3.698 3.359 -10.520 1.00 0.18 \ ATOM 185 CA GLU A 22 3.840 4.308 -9.420 1.00 0.18 \ ATOM 186 C GLU A 22 2.561 4.411 -8.597 1.00 0.18 \ ATOM 187 O GLU A 22 2.620 4.429 -7.363 1.00 0.18 \ ATOM 188 CB GLU A 22 4.240 5.677 -9.971 1.00 0.18 \ ATOM 189 CG GLU A 22 4.181 6.802 -8.961 1.00 0.18 \ ATOM 190 CD GLU A 22 4.854 8.057 -9.470 1.00 0.18 \ ATOM 191 OE1 GLU A 22 5.542 8.726 -8.663 1.00 0.18 \ ATOM 192 OE2 GLU A 22 4.714 8.366 -10.679 1.00 0.18 \ ATOM 193 N VAL A 23 1.398 4.484 -9.259 1.00 0.18 \ ATOM 194 CA VAL A 23 0.122 4.547 -8.540 1.00 0.18 \ ATOM 195 C VAL A 23 -0.042 3.328 -7.641 1.00 0.18 \ ATOM 196 O VAL A 23 -0.510 3.436 -6.498 1.00 0.18 \ ATOM 197 CB VAL A 23 -1.054 4.684 -9.531 1.00 0.18 \ ATOM 198 CG1 VAL A 23 -2.394 4.368 -8.850 1.00 0.18 \ ATOM 199 CG2 VAL A 23 -1.109 6.074 -10.094 1.00 0.18 \ ATOM 200 N ALA A 24 0.374 2.157 -8.129 1.00 0.18 \ ATOM 201 CA ALA A 24 0.227 0.929 -7.354 1.00 0.18 \ ATOM 202 C ALA A 24 1.142 0.920 -6.133 1.00 0.18 \ ATOM 203 O ALA A 24 0.755 0.426 -5.068 1.00 0.18 \ ATOM 204 CB ALA A 24 0.501 -0.282 -8.245 1.00 0.18 \ ATOM 205 N ARG A 25 2.361 1.449 -6.268 1.00 0.18 \ ATOM 206 CA ARG A 25 3.262 1.545 -5.124 1.00 0.18 \ ATOM 207 C ARG A 25 2.720 2.509 -4.074 1.00 0.18 \ ATOM 208 O ARG A 25 2.783 2.223 -2.874 1.00 0.18 \ ATOM 209 CB ARG A 25 4.655 1.997 -5.575 1.00 0.18 \ ATOM 210 CG ARG A 25 5.503 0.946 -6.261 1.00 0.18 \ ATOM 211 CD ARG A 25 6.972 1.392 -6.355 1.00 0.18 \ ATOM 212 NE ARG A 25 7.144 2.642 -7.092 1.00 0.18 \ ATOM 213 CZ ARG A 25 7.172 2.751 -8.423 1.00 0.18 \ ATOM 214 NH1 ARG A 25 7.040 1.680 -9.207 1.00 0.18 \ ATOM 215 NH2 ARG A 25 7.328 3.944 -8.980 1.00 0.18 \ ATOM 216 N LEU A 26 2.197 3.658 -4.505 1.00 0.18 \ ATOM 217 CA LEU A 26 1.627 4.615 -3.560 1.00 0.18 \ ATOM 218 C LEU A 26 0.361 4.074 -2.905 1.00 0.18 \ ATOM 219 O LEU A 26 0.152 4.268 -1.701 1.00 0.18 \ ATOM 220 CB LEU A 26 1.333 5.933 -4.265 1.00 0.18 \ ATOM 221 CG LEU A 26 2.541 6.773 -4.672 1.00 0.18 \ ATOM 222 CD1 LEU A 26 2.137 7.728 -5.778 1.00 0.18 \ ATOM 223 CD2 LEU A 26 3.039 7.533 -3.466 1.00 0.18 \ ATOM 224 N LYS A 27 -0.501 3.398 -3.677 1.00 0.18 \ ATOM 225 CA LYS A 27 -1.697 2.793 -3.094 1.00 0.18 \ ATOM 226 C LYS A 27 -1.348 1.698 -2.094 1.00 0.18 \ ATOM 227 O LYS A 27 -2.063 1.511 -1.100 1.00 0.18 \ ATOM 228 CB LYS A 27 -2.601 2.231 -4.191 1.00 0.18 \ ATOM 229 CG LYS A 27 -3.446 3.284 -4.878 1.00 0.18 \ ATOM 230 CD LYS A 27 -4.138 2.725 -6.105 1.00 0.18 \ ATOM 231 CE LYS A 27 -5.246 3.661 -6.578 1.00 0.18 \ ATOM 232 NZ LYS A 27 -6.604 3.168 -6.200 1.00 0.18 \ ATOM 233 N LYS A 28 -0.263 0.963 -2.338 1.00 0.18 \ ATOM 234 CA LYS A 28 0.200 -0.026 -1.371 1.00 0.18 \ ATOM 235 C LYS A 28 0.671 0.635 -0.085 1.00 0.18 \ ATOM 236 O LYS A 28 0.546 0.049 0.996 1.00 0.18 \ ATOM 237 CB LYS A 28 1.326 -0.862 -1.980 1.00 0.18 \ ATOM 238 CG LYS A 28 1.865 -1.965 -1.088 1.00 0.18 \ ATOM 239 CD LYS A 28 1.134 -3.278 -1.348 1.00 0.18 \ ATOM 240 CE LYS A 28 1.628 -4.386 -0.424 1.00 0.18 \ ATOM 241 NZ LYS A 28 1.559 -3.994 1.016 1.00 0.18 \ ATOM 242 N LEU A 29 1.217 1.846 -0.173 1.00 0.18 \ ATOM 243 CA LEU A 29 1.631 2.550 1.036 1.00 0.18 \ ATOM 244 C LEU A 29 0.426 3.046 1.824 1.00 0.18 \ ATOM 245 O LEU A 29 0.394 2.929 3.055 1.00 0.18 \ ATOM 246 CB LEU A 29 2.561 3.710 0.676 1.00 0.18 \ ATOM 247 CG LEU A 29 2.906 4.667 1.822 1.00 0.18 \ ATOM 248 CD1 LEU A 29 3.690 3.958 2.910 1.00 0.18 \ ATOM 249 CD2 LEU A 29 3.656 5.897 1.328 1.00 0.18 \ ATOM 250 N VAL A 30 -0.579 3.591 1.136 1.00 0.18 \ ATOM 251 CA VAL A 30 -1.785 4.059 1.819 1.00 0.18 \ ATOM 252 C VAL A 30 -2.605 2.876 2.322 1.00 0.18 \ ATOM 253 O VAL A 30 -2.915 2.775 3.513 1.00 0.18 \ ATOM 254 CB VAL A 30 -2.619 4.963 0.898 1.00 0.18 \ ATOM 255 CG1 VAL A 30 -3.847 5.488 1.648 1.00 0.18 \ ATOM 256 CG2 VAL A 30 -1.781 6.111 0.388 1.00 0.18 \ ATOM 257 N GLY A 31 -2.955 1.961 1.425 1.00 0.18 \ ATOM 258 CA GLY A 31 -3.773 0.814 1.777 1.00 0.18 \ ATOM 259 C GLY A 31 -3.114 -0.109 2.780 1.00 0.18 \ ATOM 260 O GLY A 31 -3.800 -0.793 3.540 1.00 0.18 \ """, "e6o2eA1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e6o2eA1_csv", state=0, origin=1) cmd.zoom("e6o2eA1_csv", animate=-1)