cmd.read_pdbstr("""\\nATOM 531 N VAL C 2 -11.183 25.278 0.098 1.00 12.17 N \ ATOM 532 CA VAL C 2 -9.956 25.311 0.894 1.00 9.86 C \ ATOM 533 C VAL C 2 -8.935 26.283 0.325 1.00 8.12 C \ ATOM 534 O VAL C 2 -8.753 26.400 -0.909 1.00 10.89 O \ ATOM 535 CB VAL C 2 -9.364 23.920 1.118 1.00 13.58 C \ ATOM 536 CG1 VAL C 2 -8.918 23.274 -0.192 1.00 16.72 C \ ATOM 537 CG2 VAL C 2 -8.246 23.973 2.136 1.00 17.06 C \ ATOM 538 N SER C 3 -8.236 27.010 1.206 1.00 7.92 N \ ATOM 539 CA SER C 3 -7.202 27.900 0.683 1.00 7.19 C \ ATOM 540 C SER C 3 -6.055 27.099 0.088 1.00 6.59 C \ ATOM 541 O SER C 3 -5.712 26.024 0.554 1.00 7.62 O \ ATOM 542 CB SER C 3 -6.702 28.908 1.701 1.00 8.38 C \ ATOM 543 OG SER C 3 -5.818 28.289 2.619 1.00 12.55 O \ ATOM 544 N LYS C 4 -5.454 27.630 -0.979 1.00 7.71 N \ ATOM 545 CA LYS C 4 -4.330 26.940 -1.601 1.00 6.46 C \ ATOM 546 C LYS C 4 -3.148 26.803 -0.619 1.00 6.39 C \ ATOM 547 O LYS C 4 -2.442 25.779 -0.593 1.00 7.80 O \ ATOM 548 CB LYS C 4 -3.896 27.665 -2.877 1.00 7.93 C \ ATOM 549 CG LYS C 4 -4.972 27.673 -3.930 1.00 7.71 C \ ATOM 550 CD LYS C 4 -5.415 26.269 -4.286 1.00 11.42 C \ ATOM 551 CE LYS C 4 -6.064 26.248 -5.658 1.00 16.03 C \ ATOM 552 NZ LYS C 4 -6.747 24.982 -5.938 1.00 25.49 N \ ATOM 553 N LEU C 5 -2.890 27.839 0.197 1.00 6.85 N \ ATOM 554 CA LEU C 5 -1.786 27.765 1.161 1.00 8.51 C \ ATOM 555 C LEU C 5 -2.035 26.672 2.180 1.00 6.36 C \ ATOM 556 O LEU C 5 -1.158 25.813 2.411 1.00 7.36 O \ ATOM 557 CB LEU C 5 -1.567 29.137 1.854 1.00 6.72 C \ ATOM 558 CG LEU C 5 -0.583 29.034 3.019 1.00 7.37 C \ ATOM 559 CD1 LEU C 5 0.823 28.660 2.495 1.00 9.14 C \ ATOM 560 CD2 LEU C 5 -0.552 30.390 3.690 1.00 10.55 C \ ATOM 561 N SER C 6 -3.229 26.660 2.799 1.00 6.43 N \ ATOM 562 CA SER C 6 -3.544 25.641 3.808 1.00 7.36 C \ ATOM 563 C SER C 6 -3.480 24.246 3.234 1.00 6.57 C \ ATOM 564 O SER C 6 -3.026 23.285 3.866 1.00 8.31 O \ ATOM 565 CB SER C 6 -4.945 25.958 4.389 1.00 11.52 C \ ATOM 566 OG SER C 6 -5.324 24.926 5.247 1.00 25.45 O \ ATOM 567 N GLN C 7 -3.964 24.099 2.013 1.00 7.37 N \ ATOM 568 CA GLN C 7 -3.946 22.796 1.357 1.00 8.64 C \ ATOM 569 C GLN C 7 -2.495 22.302 1.090 1.00 7.36 C \ ATOM 570 O GLN C 7 -2.178 21.120 1.309 1.00 7.48 O \ ATOM 571 CB GLN C 7 -4.812 22.798 0.076 1.00 8.42 C \ ATOM 572 CG GLN C 7 -4.746 21.470 -0.638 1.00 9.37 C \ ATOM 573 CD GLN C 7 -5.737 21.455 -1.787 1.00 9.61 C \ ATOM 574 OE1 GLN C 7 -5.611 22.269 -2.738 1.00 14.04 O \ ATOM 575 NE2 GLN C 7 -6.714 20.603 -1.697 1.00 8.02 N \ ATOM 576 N LEU C 8 -1.634 23.217 0.608 1.00 7.33 N \ ATOM 577 CA LEU C 8 -0.239 22.841 0.345 1.00 5.87 C \ ATOM 578 C LEU C 8 0.447 22.431 1.641 1.00 6.70 C \ ATOM 579 O LEU C 8 1.162 21.421 1.700 1.00 6.81 O \ ATOM 580 CB LEU C 8 0.487 23.972 -0.401 1.00 6.41 C \ ATOM 581 CG LEU C 8 1.969 23.692 -0.693 1.00 6.71 C \ ATOM 582 CD1 LEU C 8 2.174 22.432 -1.528 1.00 6.96 C \ ATOM 583 CD2 LEU C 8 2.618 24.852 -1.405 1.00 8.22 C \ ATOM 584 N GLN C 9 0.222 23.186 2.726 1.00 5.89 N \ ATOM 585 CA GLN C 9 0.795 22.851 4.012 1.00 6.30 C \ ATOM 586 C GLN C 9 0.329 21.464 4.445 1.00 7.97 C \ ATOM 587 O GLN C 9 1.117 20.642 4.972 1.00 7.21 O \ ATOM 588 CB GLN C 9 0.384 23.869 5.068 1.00 7.31 C \ ATOM 589 CG GLN C 9 1.033 25.264 4.886 1.00 7.59 C \ ATOM 590 CD GLN C 9 0.361 26.337 5.801 1.00 8.02 C \ ATOM 591 OE1 GLN C 9 -0.862 26.280 6.067 1.00 9.78 O \ ATOM 592 NE2 GLN C 9 1.095 27.374 6.194 1.00 7.68 N \ ATOM 593 N THR C 10 -1.005 21.202 4.322 1.00 7.57 N \ ATOM 594 CA THR C 10 -1.604 19.919 4.686 1.00 7.53 C \ ATOM 595 C THR C 10 -1.008 18.747 3.923 1.00 7.30 C \ ATOM 596 O THR C 10 -0.687 17.686 4.473 1.00 7.70 O \ ATOM 597 CB THR C 10 -3.134 19.990 4.498 1.00 6.88 C \ ATOM 598 OG1 THR C 10 -3.625 21.001 5.395 1.00 10.67 O \ ATOM 599 CG2 THR C 10 -3.775 18.660 4.851 1.00 8.94 C \ ATOM 600 N GLU C 11 -0.892 18.935 2.615 1.00 7.25 N \ ATOM 601 CA GLU C 11 -0.329 17.885 1.719 1.00 6.90 C \ ATOM 602 C GLU C 11 1.150 17.642 2.004 1.00 6.14 C \ ATOM 603 O GLU C 11 1.603 16.491 2.036 1.00 7.11 O \ ATOM 604 CB GLU C 11 -0.599 18.193 0.244 1.00 8.55 C \ ATOM 605 CG GLU C 11 -2.121 18.204 0.003 1.00 9.56 C \ ATOM 606 CD GLU C 11 -2.524 18.360 -1.436 1.00 12.79 C \ ATOM 607 OE1 GLU C 11 -1.857 18.930 -2.254 1.00 13.99 O \ ATOM 608 OE2 GLU C 11 -3.688 17.843 -1.713 1.00 15.88 O \ ATOM 609 N MSE C 12 1.895 18.731 2.340 1.00 6.43 N \ ATOM 610 CA MSE C 12 3.314 18.565 2.746 1.00 7.61 C \ ATOM 611 C MSE C 12 3.409 17.775 4.069 1.00 6.03 C \ ATOM 612 O MSE C 12 4.262 16.875 4.241 1.00 7.40 O \ ATOM 613 CB MSE C 12 4.039 19.955 2.869 1.00 6.71 C \ ATOM 614 CG MSE C 12 4.257 20.665 1.503 1.00 6.46 C \ ATOM 615 SE MSE C 12 5.053 22.326 1.599 1.00 13.26 SE \ ATOM 616 CE MSE C 12 4.847 22.885 -0.108 1.00 98.81 C \ ATOM 617 N LEU C 13 2.536 18.085 5.032 1.00 6.42 N \ ATOM 618 CA LEU C 13 2.524 17.329 6.282 1.00 6.86 C \ ATOM 619 C LEU C 13 2.251 15.841 6.076 1.00 7.71 C \ ATOM 620 O LEU C 13 2.936 14.969 6.639 1.00 7.14 O \ ATOM 621 CB LEU C 13 1.508 17.937 7.280 1.00 6.91 C \ ATOM 622 CG LEU C 13 1.888 19.282 7.859 1.00 7.99 C \ ATOM 623 CD1 LEU C 13 0.666 19.860 8.579 1.00 9.41 C \ ATOM 624 CD2 LEU C 13 3.049 19.166 8.858 1.00 9.00 C \ ATOM 625 N ALA C 14 1.218 15.514 5.299 1.00 7.60 N \ ATOM 626 CA ALA C 14 0.917 14.095 5.042 1.00 7.56 C \ ATOM 627 C ALA C 14 2.097 13.416 4.350 1.00 7.90 C \ ATOM 628 O ALA C 14 2.414 12.270 4.654 1.00 8.24 O \ ATOM 629 CB ALA C 14 -0.349 13.907 4.206 1.00 7.71 C \ ATOM 630 N ALA C 15 2.732 14.096 3.386 1.00 6.60 N \ ATOM 631 CA ALA C 15 3.855 13.480 2.703 1.00 7.45 C \ ATOM 632 C ALA C 15 5.035 13.208 3.662 1.00 7.74 C \ ATOM 633 O ALA C 15 5.732 12.164 3.588 1.00 7.61 O \ ATOM 634 CB ALA C 15 4.313 14.373 1.561 1.00 9.46 C \ ATOM 635 N LEU C 16 5.276 14.174 4.568 1.00 7.62 N \ ATOM 636 CA LEU C 16 6.284 13.991 5.594 1.00 7.15 C \ ATOM 637 C LEU C 16 5.962 12.785 6.429 1.00 7.76 C \ ATOM 638 O LEU C 16 6.843 11.894 6.686 1.00 8.39 O \ ATOM 639 CB LEU C 16 6.392 15.240 6.476 1.00 6.95 C \ ATOM 640 CG LEU C 16 7.275 16.339 5.888 1.00 7.26 C \ ATOM 641 CD1 LEU C 16 7.002 17.663 6.563 1.00 8.31 C \ ATOM 642 CD2 LEU C 16 8.759 15.952 5.935 1.00 10.84 C \ ATOM 643 N LEU C 17 4.719 12.721 6.909 1.00 6.76 N \ ATOM 644 CA LEU C 17 4.330 11.592 7.723 1.00 7.84 C \ ATOM 645 C LEU C 17 4.541 10.247 6.993 1.00 7.53 C \ ATOM 646 O LEU C 17 5.040 9.228 7.571 1.00 8.84 O \ ATOM 647 CB LEU C 17 2.850 11.776 8.116 1.00 9.15 C \ ATOM 648 CG LEU C 17 2.266 10.636 8.940 1.00 11.53 C \ ATOM 649 CD1 LEU C 17 2.932 10.653 10.316 1.00 15.07 C \ ATOM 650 CD2 LEU C 17 0.762 10.832 9.081 1.00 16.61 C \ ATOM 651 N GLU C 18 4.169 10.219 5.714 1.00 6.30 N \ ATOM 652 CA GLU C 18 4.223 8.975 4.959 1.00 7.55 C \ ATOM 653 C GLU C 18 5.632 8.574 4.606 1.00 6.16 C \ ATOM 654 O GLU C 18 5.921 7.380 4.357 1.00 8.22 O \ ATOM 655 CB GLU C 18 3.305 9.032 3.694 1.00 7.52 C \ ATOM 656 CG GLU C 18 1.824 9.210 4.121 1.00 8.43 C \ ATOM 657 CD GLU C 18 0.921 9.609 2.980 1.00 10.44 C \ ATOM 658 OE1 GLU C 18 1.329 9.724 1.796 1.00 9.37 O \ ATOM 659 OE2 GLU C 18 -0.341 9.788 3.376 1.00 11.34 O \ ATOM 660 N SER C 19 6.499 9.592 4.559 1.00 6.91 N \ ATOM 661 CA SER C 19 7.913 9.357 4.215 1.00 8.56 C \ ATOM 662 C SER C 19 8.696 8.752 5.380 1.00 8.91 C \ ATOM 663 O SER C 19 9.799 8.299 5.175 1.00 12.54 O \ ATOM 664 CB SER C 19 8.616 10.605 3.684 1.00 9.21 C \ ATOM 665 OG SER C 19 8.818 11.491 4.753 1.00 11.15 O \ ATOM 666 N GLY C 20 8.136 8.730 6.587 1.00 9.79 N \ ATOM 667 CA GLY C 20 8.787 8.130 7.765 1.00 9.90 C \ ATOM 668 C GLY C 20 9.737 9.110 8.419 1.00 12.85 C \ ATOM 669 O GLY C 20 10.927 9.063 8.212 1.00 49.54 O \ ATOM 670 N LEU C 21 9.180 10.080 9.062 1.00 12.44 N \ ATOM 671 CA LEU C 21 9.948 11.130 9.751 1.00 11.01 C \ ATOM 672 C LEU C 21 10.129 10.682 11.190 1.00 18.14 C \ ATOM 673 O LEU C 21 9.145 10.388 11.853 1.00 21.28 O \ ATOM 674 CB LEU C 21 9.125 12.435 9.790 1.00 10.79 C \ ATOM 675 CG LEU C 21 9.875 13.579 10.417 1.00 11.41 C \ ATOM 676 CD1 LEU C 21 11.060 14.007 9.512 1.00 13.53 C \ ATOM 677 CD2 LEU C 21 8.898 14.742 10.644 1.00 11.71 C \ ATOM 678 N SER C 22 11.368 10.544 11.613 1.00 16.07 N \ ATOM 679 CA SER C 22 11.628 10.126 12.985 1.00 19.04 C \ ATOM 680 C SER C 22 11.230 11.176 14.016 1.00 22.15 C \ ATOM 681 O SER C 22 11.169 12.381 13.742 1.00 15.53 O \ ATOM 682 CB SER C 22 13.075 9.750 13.202 1.00 16.35 C \ ATOM 683 OG SER C 22 13.855 10.930 13.271 1.00 18.82 O \ ATOM 684 N LYS C 23 10.996 10.689 15.240 1.00 23.82 N \ ATOM 685 CA LYS C 23 10.659 11.510 16.404 1.00 18.13 C \ ATOM 686 C LYS C 23 11.791 12.464 16.725 1.00 14.24 C \ ATOM 687 O LYS C 23 11.552 13.618 17.012 1.00 18.60 O \ ATOM 688 CB LYS C 23 10.350 10.635 17.616 1.00 21.90 C \ ATOM 689 CG LYS C 23 9.461 9.429 17.254 1.00 37.94 C \ ATOM 690 CD LYS C 23 10.105 8.372 16.333 1.00 46.02 C \ ATOM 691 CE LYS C 23 9.117 7.384 15.733 1.00 85.82 C \ ATOM 692 NZ LYS C 23 9.452 6.986 14.353 1.00 71.68 N \ ATOM 693 N GLU C 24 13.049 11.989 16.541 1.00 18.48 N \ ATOM 694 CA GLU C 24 14.244 12.816 16.710 1.00 14.31 C \ ATOM 695 C GLU C 24 14.340 13.916 15.677 1.00 16.89 C \ ATOM 696 O GLU C 24 14.738 15.053 15.962 1.00 15.57 O \ ATOM 697 CB GLU C 24 15.512 11.982 16.667 1.00 24.75 C \ ATOM 698 CG GLU C 24 15.720 11.170 17.955 1.00 44.28 C \ ATOM 699 CD GLU C 24 16.705 10.065 17.762 1.00 98.81 C \ ATOM 700 OE1 GLU C 24 17.572 10.097 16.904 1.00 98.81 O \ ATOM 701 OE2 GLU C 24 16.457 9.028 18.528 1.00 84.44 O \ ATOM 702 N ALA C 25 13.965 13.616 14.435 1.00 13.99 N \ ATOM 703 CA ALA C 25 14.032 14.632 13.404 1.00 12.91 C \ ATOM 704 C ALA C 25 13.019 15.717 13.648 1.00 10.54 C \ ATOM 705 O ALA C 25 13.236 16.862 13.358 1.00 12.30 O \ ATOM 706 CB ALA C 25 13.828 14.036 11.996 1.00 13.13 C \ ATOM 707 N LEU C 26 11.867 15.342 14.139 1.00 11.02 N \ ATOM 708 CA LEU C 26 10.854 16.307 14.425 1.00 11.41 C \ ATOM 709 C LEU C 26 11.378 17.227 15.503 1.00 10.37 C \ ATOM 710 O LEU C 26 11.281 18.422 15.366 1.00 12.74 O \ ATOM 711 CB LEU C 26 9.548 15.620 14.925 1.00 13.13 C \ ATOM 712 CG LEU C 26 8.475 16.622 15.396 1.00 13.01 C \ ATOM 713 CD1 LEU C 26 8.080 17.574 14.240 1.00 14.59 C \ ATOM 714 CD2 LEU C 26 7.253 15.846 15.918 1.00 13.71 C \ ATOM 715 N ILE C 27 11.952 16.651 16.587 1.00 14.52 N \ ATOM 716 CA ILE C 27 12.487 17.482 17.684 1.00 15.69 C \ ATOM 717 C ILE C 27 13.563 18.442 17.210 1.00 11.01 C \ ATOM 718 O ILE C 27 13.587 19.600 17.562 1.00 14.77 O \ ATOM 719 CB ILE C 27 12.979 16.568 18.806 1.00 19.38 C \ ATOM 720 CG1 ILE C 27 11.754 15.974 19.513 1.00 13.06 C \ ATOM 721 CG2 ILE C 27 13.917 17.334 19.802 1.00 17.40 C \ ATOM 722 CD1 ILE C 27 12.097 14.760 20.384 1.00 15.78 C \ ATOM 723 N GLN C 28 14.432 17.965 16.325 1.00 13.88 N \ ATOM 724 CA GLN C 28 15.496 18.781 15.804 1.00 13.35 C \ ATOM 725 C GLN C 28 14.949 19.974 15.017 1.00 11.71 C \ ATOM 726 O GLN C 28 15.353 21.110 15.175 1.00 13.08 O \ ATOM 727 CB GLN C 28 16.480 17.906 14.988 1.00 15.28 C \ ATOM 728 CG GLN C 28 17.831 18.567 14.713 1.00 49.30 C \ ATOM 729 CD GLN C 28 18.495 18.992 16.002 1.00 98.81 C \ ATOM 730 OE1 GLN C 28 18.095 18.542 17.087 1.00 85.11 O \ ATOM 731 NE2 GLN C 28 19.471 19.894 15.904 1.00 52.14 N \ ATOM 732 N ALA C 29 13.903 19.740 14.225 1.00 11.79 N \ ATOM 733 CA ALA C 29 13.316 20.852 13.477 1.00 13.37 C \ ATOM 734 C ALA C 29 12.613 21.897 14.357 1.00 13.21 C \ ATOM 735 O ALA C 29 12.460 23.031 13.963 1.00 14.37 O \ ATOM 736 CB ALA C 29 12.319 20.289 12.462 1.00 13.75 C \ ATOM 737 N LEU C 30 12.196 21.501 15.561 1.00 13.57 N \ ATOM 738 CA LEU C 30 11.499 22.386 16.461 1.00 16.46 C \ ATOM 739 C LEU C 30 12.495 23.072 17.398 1.00 19.99 C \ ATOM 740 O LEU C 30 12.151 24.131 17.954 1.00 25.43 O \ ATOM 741 CB LEU C 30 10.405 21.612 17.212 1.00 16.58 C \ ATOM 1 N MET A 1 23.781 15.112 7.639 1.00 98.81 N \ ATOM 2 CA MET A 1 23.583 15.060 6.213 1.00 27.58 C \ ATOM 3 C MET A 1 23.626 13.585 5.731 1.00 20.18 C \ ATOM 4 O MET A 1 24.375 13.178 4.858 1.00 17.27 O \ ATOM 5 CB MET A 1 24.571 16.030 5.545 1.00 19.79 C \ ATOM 6 N VAL A 2 22.829 12.797 6.397 1.00 16.57 N \ ATOM 7 CA VAL A 2 22.689 11.367 6.191 1.00 11.96 C \ ATOM 8 C VAL A 2 22.163 10.806 4.869 1.00 9.16 C \ ATOM 9 O VAL A 2 22.738 9.901 4.287 1.00 9.96 O \ ATOM 10 CB VAL A 2 22.965 10.406 7.321 1.00 16.09 C \ ATOM 11 CG1 VAL A 2 23.078 11.158 8.633 1.00 37.18 C \ ATOM 12 CG2 VAL A 2 21.840 9.409 7.483 1.00 19.39 C \ ATOM 13 N SER A 3 21.079 11.386 4.374 1.00 10.83 N \ ATOM 14 CA SER A 3 20.501 10.868 3.135 1.00 8.60 C \ ATOM 15 C SER A 3 19.785 11.943 2.398 1.00 6.72 C \ ATOM 16 O SER A 3 19.458 12.966 2.992 1.00 8.60 O \ ATOM 17 CB SER A 3 19.555 9.695 3.414 1.00 9.12 C \ ATOM 18 OG SER A 3 18.361 10.219 3.990 1.00 11.55 O \ ATOM 19 N LYS A 4 19.564 11.708 1.105 1.00 6.54 N \ ATOM 20 CA LYS A 4 18.818 12.692 0.315 1.00 7.50 C \ ATOM 21 C LYS A 4 17.423 12.919 0.927 1.00 6.75 C \ ATOM 22 O LYS A 4 16.921 14.050 0.971 1.00 7.54 O \ ATOM 23 CB LYS A 4 18.684 12.278 -1.141 1.00 9.12 C \ ATOM 24 CG LYS A 4 19.980 12.216 -1.917 1.00 8.82 C \ ATOM 25 CD LYS A 4 19.715 11.499 -3.254 1.00 21.50 C \ ATOM 26 CE LYS A 4 20.941 11.320 -4.142 1.00 20.30 C \ ATOM 27 NZ LYS A 4 20.621 10.669 -5.427 1.00 23.24 N \ ATOM 28 N LEU A 5 16.779 11.817 1.375 1.00 6.71 N \ ATOM 29 CA LEU A 5 15.466 11.941 1.959 1.00 7.03 C \ ATOM 30 C LEU A 5 15.498 12.732 3.245 1.00 8.17 C \ ATOM 31 O LEU A 5 14.668 13.606 3.465 1.00 7.75 O \ ATOM 32 CB LEU A 5 14.855 10.564 2.183 1.00 7.64 C \ ATOM 33 CG LEU A 5 13.447 10.601 2.863 1.00 8.64 C \ ATOM 34 CD1 LEU A 5 12.419 11.367 2.051 1.00 10.05 C \ ATOM 35 CD2 LEU A 5 12.930 9.201 3.116 1.00 12.55 C \ ATOM 36 N SER A 6 16.488 12.471 4.116 1.00 8.33 N \ ATOM 37 CA SER A 6 16.545 13.257 5.364 1.00 8.45 C \ ATOM 38 C SER A 6 16.770 14.731 5.111 1.00 8.62 C \ ATOM 39 O SER A 6 16.148 15.582 5.759 1.00 8.06 O \ ATOM 40 CB SER A 6 17.487 12.672 6.408 1.00 11.90 C \ ATOM 41 OG SER A 6 18.799 12.818 5.965 1.00 17.22 O \ ATOM 42 N GLN A 7 17.646 15.081 4.129 1.00 9.03 N \ ATOM 43 CA GLN A 7 17.880 16.483 3.813 1.00 7.50 C \ ATOM 44 C GLN A 7 16.619 17.139 3.302 1.00 6.77 C \ ATOM 45 O GLN A 7 16.283 18.240 3.688 1.00 9.17 O \ ATOM 46 CB GLN A 7 18.950 16.584 2.732 1.00 10.25 C \ ATOM 47 CG GLN A 7 19.274 18.025 2.268 1.00 15.29 C \ ATOM 48 CD GLN A 7 20.313 18.034 1.126 1.00 39.11 C \ ATOM 49 OE1 GLN A 7 21.153 17.126 1.052 1.00 65.49 O \ ATOM 50 NE2 GLN A 7 20.296 19.076 0.257 1.00 23.25 N \ ATOM 51 N LEU A 8 15.878 16.450 2.427 1.00 7.19 N \ ATOM 52 CA LEU A 8 14.642 17.003 1.904 1.00 6.43 C \ ATOM 53 C LEU A 8 13.608 17.180 3.028 1.00 5.51 C \ ATOM 54 O LEU A 8 12.888 18.189 3.053 1.00 7.50 O \ ATOM 55 CB LEU A 8 14.136 16.096 0.765 1.00 7.41 C \ ATOM 56 CG LEU A 8 12.741 16.458 0.171 1.00 9.29 C \ ATOM 57 CD1 LEU A 8 12.683 17.903 -0.334 1.00 8.26 C \ ATOM 58 CD2 LEU A 8 12.435 15.455 -0.955 1.00 8.40 C \ ATOM 59 N GLN A 9 13.487 16.203 3.923 1.00 6.44 N \ ATOM 60 CA GLN A 9 12.564 16.334 5.062 1.00 7.01 C \ ATOM 61 C GLN A 9 12.894 17.552 5.904 1.00 7.51 C \ ATOM 62 O GLN A 9 12.001 18.318 6.291 1.00 7.87 O \ ATOM 63 CB GLN A 9 12.612 15.081 5.942 1.00 7.11 C \ ATOM 64 CG GLN A 9 11.984 13.824 5.282 1.00 8.79 C \ ATOM 65 CD GLN A 9 12.320 12.541 6.039 1.00 9.71 C \ ATOM 66 OE1 GLN A 9 13.405 12.430 6.669 1.00 11.73 O \ ATOM 67 NE2 GLN A 9 11.387 11.601 6.033 1.00 9.17 N \ ATOM 68 N THR A 10 14.211 17.778 6.146 1.00 6.79 N \ ATOM 69 CA THR A 10 14.659 18.918 6.923 1.00 6.64 C \ ATOM 70 C THR A 10 14.216 20.232 6.292 1.00 6.81 C \ ATOM 71 O THR A 10 13.726 21.169 6.954 1.00 7.92 O \ ATOM 72 CB THR A 10 16.206 18.834 7.070 1.00 9.22 C \ ATOM 73 OG1 THR A 10 16.530 17.632 7.749 1.00 12.38 O \ ATOM 74 CG2 THR A 10 16.789 20.051 7.786 1.00 10.77 C \ ATOM 75 N GLU A 11 14.412 20.329 4.978 1.00 7.01 N \ ATOM 76 CA GLU A 11 14.031 21.549 4.228 1.00 6.59 C \ ATOM 77 C GLU A 11 12.517 21.792 4.290 1.00 6.64 C \ ATOM 78 O GLU A 11 12.069 22.895 4.438 1.00 8.26 O \ ATOM 79 CB GLU A 11 14.412 21.432 2.732 1.00 8.05 C \ ATOM 80 CG GLU A 11 15.930 21.341 2.493 1.00 11.13 C \ ATOM 81 CD GLU A 11 16.492 22.704 2.649 1.00 23.05 C \ ATOM 82 OE1 GLU A 11 15.839 23.650 3.095 1.00 28.11 O \ ATOM 83 OE2 GLU A 11 17.686 22.805 2.152 1.00 24.67 O \ ATOM 84 N MSE A 12 11.746 20.726 4.116 1.00 6.96 N \ ATOM 85 CA MSE A 12 10.303 20.828 4.161 1.00 6.75 C \ ATOM 86 C MSE A 12 9.813 21.334 5.521 1.00 6.06 C \ ATOM 87 O MSE A 12 8.908 22.192 5.582 1.00 6.91 O \ ATOM 88 CB MSE A 12 9.632 19.485 3.800 1.00 7.32 C \ ATOM 89 CG MSE A 12 9.861 19.018 2.349 1.00 7.99 C \ ATOM 90 SE MSE A 12 9.120 17.328 1.965 1.00 13.49 SE \ ATOM 91 CE MSE A 12 7.336 17.670 2.179 1.00 8.50 C \ ATOM 92 N LEU A 13 10.319 20.743 6.606 1.00 5.84 N \ ATOM 93 CA LEU A 13 9.913 21.223 7.944 1.00 7.92 C \ ATOM 94 C LEU A 13 10.254 22.716 8.124 1.00 6.64 C \ ATOM 95 O LEU A 13 9.448 23.503 8.612 1.00 7.31 O \ ATOM 96 CB LEU A 13 10.587 20.352 9.032 1.00 8.57 C \ ATOM 97 CG LEU A 13 10.107 18.923 9.042 1.00 8.12 C \ ATOM 98 CD1 LEU A 13 11.114 17.971 9.765 1.00 9.94 C \ ATOM 99 CD2 LEU A 13 8.729 18.882 9.709 1.00 9.85 C \ ATOM 100 N ALA A 14 11.453 23.124 7.727 1.00 6.59 N \ ATOM 101 CA ALA A 14 11.803 24.515 7.829 1.00 7.86 C \ ATOM 102 C ALA A 14 10.850 25.383 7.023 1.00 6.67 C \ ATOM 103 O ALA A 14 10.383 26.435 7.478 1.00 8.27 O \ ATOM 104 CB ALA A 14 13.236 24.798 7.426 1.00 7.99 C \ ATOM 105 N ALA A 15 10.571 24.955 5.788 1.00 6.78 N \ ATOM 106 CA ALA A 15 9.670 25.726 4.912 1.00 7.00 C \ ATOM 107 C ALA A 15 8.280 25.903 5.517 1.00 6.22 C \ ATOM 108 O ALA A 15 7.646 26.956 5.391 1.00 6.55 O \ ATOM 109 CB ALA A 15 9.621 25.134 3.489 1.00 8.62 C \ ATOM 110 N LEU A 16 7.787 24.855 6.174 1.00 7.70 N \ ATOM 111 CA LEU A 16 6.480 24.911 6.746 1.00 6.98 C \ ATOM 112 C LEU A 16 6.418 25.939 7.855 1.00 7.27 C \ ATOM 113 O LEU A 16 5.474 26.718 7.936 1.00 7.34 O \ ATOM 114 CB LEU A 16 6.036 23.533 7.280 1.00 7.81 C \ ATOM 115 CG LEU A 16 5.642 22.541 6.186 1.00 7.35 C \ ATOM 116 CD1 LEU A 16 5.494 21.142 6.816 1.00 9.66 C \ ATOM 117 CD2 LEU A 16 4.306 22.974 5.576 1.00 8.78 C \ ATOM 118 N LEU A 17 7.399 25.876 8.763 1.00 7.86 N \ ATOM 119 CA LEU A 17 7.432 26.863 9.861 1.00 8.01 C \ ATOM 120 C LEU A 17 7.551 28.290 9.292 1.00 8.16 C \ ATOM 121 O LEU A 17 6.885 29.232 9.760 1.00 10.34 O \ ATOM 122 CB LEU A 17 8.573 26.569 10.848 1.00 9.84 C \ ATOM 123 CG LEU A 17 8.321 25.295 11.637 1.00 11.07 C \ ATOM 124 CD1 LEU A 17 9.548 24.858 12.424 1.00 15.70 C \ ATOM 125 CD2 LEU A 17 7.138 25.434 12.578 1.00 14.79 C \ ATOM 126 N GLU A 18 8.377 28.452 8.246 1.00 7.96 N \ ATOM 127 CA GLU A 18 8.498 29.774 7.645 1.00 9.25 C \ ATOM 128 C GLU A 18 7.143 30.294 7.084 1.00 8.20 C \ ATOM 129 O GLU A 18 6.854 31.480 7.124 1.00 10.86 O \ ATOM 130 CB GLU A 18 9.607 29.746 6.566 1.00 8.24 C \ ATOM 131 CG GLU A 18 9.657 31.041 5.715 1.00 10.24 C \ ATOM 132 CD GLU A 18 10.776 31.052 4.671 1.00 12.63 C \ ATOM 133 OE1 GLU A 18 11.612 31.901 4.659 1.00 16.04 O \ ATOM 134 OE2 GLU A 18 10.762 30.066 3.781 1.00 11.42 O \ ATOM 135 N SER A 19 6.344 29.395 6.520 1.00 7.51 N \ ATOM 136 CA SER A 19 5.052 29.747 5.931 1.00 7.94 C \ ATOM 137 C SER A 19 4.008 30.126 6.942 1.00 9.22 C \ ATOM 138 O SER A 19 2.922 30.579 6.574 1.00 11.43 O \ ATOM 139 CB SER A 19 4.504 28.629 5.023 1.00 8.12 C \ ATOM 140 OG SER A 19 3.977 27.497 5.787 1.00 7.88 O \ ATOM 141 N GLY A 20 4.274 29.908 8.223 1.00 9.30 N \ ATOM 142 CA GLY A 20 3.291 30.300 9.236 1.00 9.68 C \ ATOM 143 C GLY A 20 2.666 29.175 9.999 1.00 13.89 C \ ATOM 144 O GLY A 20 1.851 29.416 10.900 1.00 14.22 O \ ATOM 145 N LEU A 21 2.970 27.933 9.633 1.00 9.78 N \ ATOM 146 CA LEU A 21 2.419 26.825 10.356 1.00 10.64 C \ ATOM 147 C LEU A 21 2.981 26.787 11.767 1.00 12.48 C \ ATOM 148 O LEU A 21 4.184 26.881 11.948 1.00 13.34 O \ ATOM 149 CB LEU A 21 2.767 25.544 9.627 1.00 11.38 C \ ATOM 150 CG LEU A 21 2.029 24.348 10.184 1.00 17.06 C \ ATOM 151 CD1 LEU A 21 0.647 24.323 9.552 1.00 20.30 C \ ATOM 152 CD2 LEU A 21 2.806 23.073 9.873 1.00 18.41 C \ ATOM 153 N SER A 22 2.107 26.758 12.783 1.00 12.94 N \ ATOM 154 CA SER A 22 2.663 26.793 14.142 1.00 12.24 C \ ATOM 155 C SER A 22 3.459 25.546 14.487 1.00 12.57 C \ ATOM 156 O SER A 22 3.199 24.476 13.978 1.00 10.61 O \ ATOM 157 CB SER A 22 1.596 27.020 15.210 1.00 15.87 C \ ATOM 158 OG SER A 22 0.856 25.839 15.383 1.00 16.41 O \ ATOM 159 N LYS A 23 4.329 25.668 15.518 1.00 15.08 N \ ATOM 160 CA LYS A 23 5.011 24.522 16.065 1.00 13.79 C \ ATOM 161 C LYS A 23 4.014 23.523 16.662 1.00 12.78 C \ ATOM 162 O LYS A 23 4.127 22.313 16.505 1.00 12.65 O \ ATOM 163 CB LYS A 23 6.059 24.923 17.101 1.00 16.25 C \ ATOM 164 CG LYS A 23 7.195 25.758 16.507 1.00 14.54 C \ ATOM 165 CD LYS A 23 8.392 25.907 17.461 1.00 13.20 C \ ATOM 166 CE LYS A 23 9.539 26.654 16.809 1.00 16.31 C \ ATOM 167 NZ LYS A 23 10.821 26.504 17.509 1.00 23.67 N \ ATOM 168 N GLU A 24 2.983 24.051 17.311 1.00 13.66 N \ ATOM 169 CA GLU A 24 1.980 23.178 17.861 1.00 16.27 C \ ATOM 170 C GLU A 24 1.259 22.338 16.767 1.00 13.18 C \ ATOM 171 O GLU A 24 1.039 21.140 16.877 1.00 14.06 O \ ATOM 172 CB GLU A 24 0.966 23.992 18.693 1.00 21.45 C \ ATOM 173 CG GLU A 24 -0.263 23.131 19.095 1.00 21.89 C \ ATOM 174 CD GLU A 24 -1.233 23.863 19.996 1.00 35.46 C \ ATOM 175 OE1 GLU A 24 -1.108 25.044 20.281 1.00 29.51 O \ ATOM 176 OE2 GLU A 24 -2.211 23.096 20.446 1.00 40.36 O \ ATOM 177 N ALA A 25 0.868 22.983 15.653 1.00 14.33 N \ ATOM 178 CA ALA A 25 0.225 22.262 14.532 1.00 12.79 C \ ATOM 179 C ALA A 25 1.164 21.250 13.920 1.00 10.56 C \ ATOM 180 O ALA A 25 0.747 20.166 13.506 1.00 13.06 O \ ATOM 181 CB ALA A 25 -0.215 23.233 13.442 1.00 12.72 C \ ATOM 182 N LEU A 26 2.481 21.566 13.873 1.00 10.69 N \ ATOM 183 CA LEU A 26 3.438 20.588 13.388 1.00 12.03 C \ ATOM 184 C LEU A 26 3.451 19.329 14.270 1.00 10.66 C \ ATOM 185 O LEU A 26 3.417 18.184 13.825 1.00 12.38 O \ ATOM 186 CB LEU A 26 4.849 21.184 13.391 1.00 26.71 C \ ATOM 187 CG LEU A 26 5.684 20.842 12.175 1.00 26.99 C \ ATOM 188 CD1 LEU A 26 5.003 21.460 10.999 1.00 37.01 C \ ATOM 189 CD2 LEU A 26 7.047 21.497 12.330 1.00 28.64 C \ ATOM 190 N ILE A 27 3.506 19.578 15.593 1.00 11.20 N \ ATOM 191 CA ILE A 27 3.471 18.501 16.551 1.00 12.69 C \ ATOM 192 C ILE A 27 2.186 17.680 16.452 1.00 13.08 C \ ATOM 193 O ILE A 27 2.183 16.466 16.481 1.00 13.85 O \ ATOM 194 CB ILE A 27 3.654 19.044 17.967 1.00 15.16 C \ ATOM 195 CG1 ILE A 27 5.072 19.561 18.044 1.00 14.15 C \ ATOM 196 CG2 ILE A 27 3.389 17.942 18.986 1.00 13.20 C \ ATOM 197 CD1 ILE A 27 5.307 20.439 19.262 1.00 38.09 C \ ATOM 198 N GLN A 28 1.067 18.358 16.344 1.00 12.34 N \ ATOM 199 CA GLN A 28 -0.219 17.665 16.233 1.00 16.15 C \ ATOM 200 C GLN A 28 -0.228 16.698 15.089 1.00 14.17 C \ ATOM 201 O GLN A 28 -0.763 15.603 15.192 1.00 16.36 O \ ATOM 202 CB GLN A 28 -1.407 18.661 16.091 1.00 16.52 C \ ATOM 203 CG GLN A 28 -2.204 18.631 14.735 1.00 98.81 C \ ATOM 204 CD GLN A 28 -2.353 19.944 13.926 1.00 98.81 C \ ATOM 205 OE1 GLN A 28 -3.014 20.961 14.340 1.00 34.51 O \ ATOM 206 NE2 GLN A 28 -1.838 19.907 12.696 1.00 14.74 N \ ATOM 207 N ALA A 29 0.303 17.146 13.926 1.00 11.88 N \ ATOM 208 CA ALA A 29 0.294 16.311 12.731 1.00 11.93 C \ ATOM 209 C ALA A 29 1.306 15.159 12.723 1.00 12.11 C \ ATOM 210 O ALA A 29 1.001 14.067 12.207 1.00 15.64 O \ ATOM 211 CB ALA A 29 0.472 17.173 11.467 1.00 11.95 C \ ATOM 212 N LEU A 30 2.538 15.444 13.226 1.00 10.27 N \ ATOM 213 CA LEU A 30 3.649 14.554 13.084 1.00 9.96 C \ ATOM 214 C LEU A 30 4.164 13.843 14.320 1.00 14.48 C \ ATOM 215 O LEU A 30 5.016 12.962 14.184 1.00 19.23 O \ ATOM 216 CB LEU A 30 4.837 15.274 12.413 1.00 12.92 C \ ATOM 217 CG LEU A 30 4.494 15.994 11.082 1.00 11.52 C \ ATOM 218 CD1 LEU A 30 5.682 16.760 10.533 1.00 13.41 C \ ATOM 219 CD2 LEU A 30 3.992 15.011 10.028 1.00 16.87 C \ ATOM 220 N GLY A 31 3.728 14.292 15.484 1.00 13.45 N \ ATOM 221 CA GLY A 31 4.129 13.740 16.779 1.00 16.81 C \ ATOM 222 C GLY A 31 3.345 12.462 17.031 1.00 25.75 C \ ATOM 223 O GLY A 31 3.699 11.689 17.899 1.00 57.43 O \ """, "1g2y.interface.2") cmd.set('ignore_case', '0') cmd.set('retain_order', '1') cmd.set('cartoon_smooth_loops', 0) cmd.set('transparency', 0.6) cmd.set('surface_color', 'grey80') cmd.hide('everything', 'all') cmd.color('grey80', 'all') cmd.select('dom', 'c. C & i. 2-30') cmd.show('cartoon', 'dom') cmd.spectrum('count', 'rainbow', 'dom') cmd.create('partner', 'c. A & i. 1-31') cmd.show('cartoon', 'partner') cmd.select('inter_resi', 'c. A & i. 5 | c. A & i. 9 | c. A & i. 12 | c. A & i. 13 | c. A & i. 16 | c. A & i. 17 | c. A & i. 19 | c. A & i. 21 | c. A & i. 23 | c. A & i. 26 | c. A & i. 29 | c. A & i. 30 | c. A & i. 31') cmd.color('purple', 'inter_resi') cmd.orient('dom | inter_resi') cmd.select('ptn_inter_resi', 'byres (!(n. C+O+H+CA+N)&dom within 4 of inter)') cmd.set_bond('stick_radius', 0.1, 'ptn_inter_resi') cmd.color('atomic','!e. C & inter_resi & (!(n. C+O+H+CA|(n. N&!r. pro)))') cmd.color('grey70','e. C & inter_resi & (!(n. C+O+H+CA|(n. N&!r. pro)))') cmd.color('atomic', '!e. C & ptn_inter_resi & (!(n. C+O+H+CA|(n. N&!r. pro)))') cmd.color('grey70', 'e. C & ptn_inter_resi & (!(n. C+O+H+CA|(n. N&!r. pro)))') cmd.show('sticks', 'ptn_inter_resi & !(n;C,O,H|(n. N&!r. pro))') cmd.show('sticks', 'inter_resi & !(n;C,O,H|(n. N&!r. pro))') cmd.show('surface', 'partner') cmd.deselect()